BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00034162
         (1170 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise...   509   e-142
gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus...   439   e-121
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su...   410   e-112
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   410   e-112
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   409   e-112
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub...   408   e-111
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   405   e-110
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   401   e-109
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-...   399   e-108
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub...   390   e-106
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma...   387   e-105
ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV su...   385   e-104
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   382   e-103
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub...   379   e-102
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub...   379   e-102
ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV su...   379   e-102
ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV su...   379   e-102
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su...   379   e-102
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su...   379   e-102
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr...   364   4e-98

>gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea]
          Length = 1380

 Score =  509 bits (1311), Expect = e-142
 Identities = 250/393 (63%), Positives = 314/393 (79%), Gaps = 3/393 (0%)
 Frame = +1

Query: 1    SLLVTPNSHRVREFGQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSEKLTN 180
            SLLVTPNSHRVREFG  ITVD TT++YRKL DFRGS NEL+ARVLERYK+    SEK++ 
Sbjct: 193  SLLVTPNSHRVREFGGHITVDGTTRLYRKLTDFRGSANELNARVLERYKIC---SEKVSA 249

Query: 181  LQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPFPVAQN 360
            ++K+YEKQS+NDSASS+SGL+NIK+L+L KRTD++FRMVVVGDPR+KV EIGLP  +A++
Sbjct: 250  IEKIYEKQSSNDSASSSSGLRNIKELILAKRTDNAFRMVVVGDPRLKVDEIGLPIQIAES 309

Query: 361  VLITDHVNKWNWDKLKPFCEYMLHLRGQFT---VIRDGQKLSIWVTDMLRAGDLICRPLI 531
            VLI+D ++  +W KL+ +C+ ML+ +  F+   VIR+GQK  I+  DML+ GD I RP+ 
Sbjct: 310  VLISDLISIHSWGKLESWCDLMLYKKAPFSPFSVIRNGQKTHIFSKDMLQVGDSISRPIS 369

Query: 532  DGDTVLINRPPSIHQHSLISLSVKILPINSVVSINPLICNPLRGDFDGDCLHGYVPQSIN 711
            DGD VLINRPPSIHQHSL++LSVK+LPI SV++INPL C PLRGDFDGDCLHG+VPQS+N
Sbjct: 370  DGDIVLINRPPSIHQHSLLALSVKVLPIKSVIAINPLTCLPLRGDFDGDCLHGFVPQSLN 429

Query: 712  SRIELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVILKKSEMQQLQMFSSCI 891
            SR+E+ EL SLK QLVNGQNGR+L++LGQDSLT+AYL L + V L K+E QQLQMF SC+
Sbjct: 430  SRVEIGELASLKKQLVNGQNGRSLMSLGQDSLTAAYLILNNSVTLNKAEFQQLQMFCSCV 489

Query: 892  EVSPAVEKSKSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSS 1071
             + PA+    S  ++WTGKQ             Y S+ VCIRKG+LISSS+ +SWL D+ 
Sbjct: 490  PILPAIVNMSSNGTWWTGKQLFTLLLPVDSGFDYVSSDVCIRKGELISSSNCTSWLRDAD 549

Query: 1072 GNLFQCLLRHCGDRALGVLNDCQELLCEWLTRR 1170
             NL+ CL+RHCGDRALG LN  QE+LCEWL+R+
Sbjct: 550  ENLYLCLVRHCGDRALGFLNTAQEVLCEWLSRQ 582


>gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus guttatus]
          Length = 1379

 Score =  439 bits (1130), Expect = e-121
 Identities = 230/390 (58%), Positives = 277/390 (71%)
 Frame = +1

Query: 1    SLLVTPNSHRVREFGQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSEKLTN 180
            SLLVTPNSHRVREFGQRIT+DE T+MYRKL+DFRGSPNEL+AR                 
Sbjct: 228  SLLVTPNSHRVREFGQRITIDELTRMYRKLVDFRGSPNELTAR----------------- 270

Query: 181  LQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPFPVAQN 360
                    S NDSASS+S LKNIK+L+L KRTD+ FRMVVVGDPR++V EIGLP  VA+N
Sbjct: 271  --------SLNDSASSSSALKNIKELVLAKRTDNCFRMVVVGDPRIRVDEIGLPSHVAEN 322

Query: 361  VLITDHVNKWNWDKLKPFCEYMLHLRGQFTVIRDGQKLSIWVTDMLRAGDLICRPLIDGD 540
            +LI DH+N WNWDKL+  C++ML  +G F+++R+G++++IW  DMLR GD + RPLIDGD
Sbjct: 323  MLIADHINLWNWDKLEVCCDFMLCHKGNFSILRNGERITIWSKDMLRTGDSLRRPLIDGD 382

Query: 541  TVLINRPPSIHQHSLISLSVKILPINSVVSINPLICNPLRGDFDGDCLHGYVPQSINSRI 720
             VL+NRPPSIHQHSLI+LSVKILP  SVVSINPLIC+P RGDFDGDCLHGYVPQS+NSR+
Sbjct: 383  IVLVNRPPSIHQHSLIALSVKILPTTSVVSINPLICSPFRGDFDGDCLHGYVPQSVNSRV 442

Query: 721  ELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVILKKSEMQQLQMFSSCIEVS 900
            EL ELVSL  QLVNGQ+GRNLL+L QDSLT+A+L LEDGVIL K+E+QQLQMFSS +   
Sbjct: 443  ELQELVSLDKQLVNGQSGRNLLSLAQDSLTAAHLILEDGVILNKTEIQQLQMFSSSL--- 499

Query: 901  PAVEKSKSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGNL 1080
                                         +YAS    +  G+++SSS GSSWLND+S NL
Sbjct: 500  --------------------FGHLLPPEFSYASNSAHVMNGEVLSSS-GSSWLNDTSENL 538

Query: 1081 FQCLLRHCGDRALGVLNDCQELLCEWLTRR 1170
            +QCL                E+LCEW+ RR
Sbjct: 539  YQCL----------------EVLCEWIARR 552


>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Solanum tuberosum]
          Length = 1233

 Score =  410 bits (1055), Expect = e-112
 Identities = 210/391 (53%), Positives = 280/391 (71%), Gaps = 1/391 (0%)
 Frame = +1

Query: 1    SLLVTPNSHRVREFGQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSEKLTN 180
            S L+TPNSHRV EFGQ +  DE+ ++YRKLIDFRG+ N+LS  VL+R K+SKIR+++   
Sbjct: 11   SCLLTPNSHRVTEFGQHMIFDESNRLYRKLIDFRGTANDLSMCVLDRIKVSKIRADRSV- 69

Query: 181  LQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPFPVAQN 360
                      ND  + A+GLK +K+L+L KRT+H+FRMVVVGDP +++ EIG+P  VA+N
Sbjct: 70   ---------INDPNAPATGLKYVKELVLAKRTNHAFRMVVVGDPNIELGEIGIPCHVAEN 120

Query: 361  VLITDHVNKWNWDKLKPFCEYMLHLRGQFTVIRDGQKLSIWVTDMLRAGDLICRPLIDGD 540
            + + + ++  NW+++   C+ M+  RG   V R+G  + I V D L+ GD+I RPLIDGD
Sbjct: 121  LHMAESLSLRNWERMTDLCDLMILQRGGILVRRNGVLVRISVMDRLQNGDIIHRPLIDGD 180

Query: 541  TVLINRPPSIHQHSLISLSVKILPINSVVSINPLICNPLRGDFDGDCLHGYVPQSINSRI 720
             V+INRPPSIHQHSLI+LSV+ILPINSV+SINPL+C+P RGDFDGDCLHGY+PQSI+SRI
Sbjct: 181  VVMINRPPSIHQHSLIALSVRILPINSVLSINPLVCSPFRGDFDGDCLHGYIPQSIDSRI 240

Query: 721  ELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVILKKSEMQQLQMFSSCIEVS 900
            EL+ELV+LK QL++GQNG+NLL+L  DSLT+A+L LE GV L + +MQQLQMF       
Sbjct: 241  ELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQMFCPRQLGM 300

Query: 901  PAVEKSKSG-ASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGN 1077
             A+ K+  G   +WTGKQ             + S GVCI +G++++SS GSSWL D S N
Sbjct: 301  TAIVKAPPGNLCYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSSWLRDVSDN 360

Query: 1078 LFQCLLRHCGDRALGVLNDCQELLCEWLTRR 1170
            LF  L++H G   L +L   Q +LCEWL+ R
Sbjct: 361  LFYSLVKHHGGDTLDLLYAAQTVLCEWLSMR 391


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Solanum tuberosum]
          Length = 1446

 Score =  410 bits (1055), Expect = e-112
 Identities = 210/391 (53%), Positives = 280/391 (71%), Gaps = 1/391 (0%)
 Frame = +1

Query: 1    SLLVTPNSHRVREFGQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSEKLTN 180
            S L+TPNSHRV EFGQ +  DE+ ++YRKLIDFRG+ N+LS  VL+R K+SKIR+++   
Sbjct: 224  SCLLTPNSHRVTEFGQHMIFDESNRLYRKLIDFRGTANDLSMCVLDRIKVSKIRADRSV- 282

Query: 181  LQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPFPVAQN 360
                      ND  + A+GLK +K+L+L KRT+H+FRMVVVGDP +++ EIG+P  VA+N
Sbjct: 283  ---------INDPNAPATGLKYVKELVLAKRTNHAFRMVVVGDPNIELGEIGIPCHVAEN 333

Query: 361  VLITDHVNKWNWDKLKPFCEYMLHLRGQFTVIRDGQKLSIWVTDMLRAGDLICRPLIDGD 540
            + + + ++  NW+++   C+ M+  RG   V R+G  + I V D L+ GD+I RPLIDGD
Sbjct: 334  LHMAESLSLRNWERMTDLCDLMILQRGGILVRRNGVLVRISVMDRLQNGDIIHRPLIDGD 393

Query: 541  TVLINRPPSIHQHSLISLSVKILPINSVVSINPLICNPLRGDFDGDCLHGYVPQSINSRI 720
             V+INRPPSIHQHSLI+LSV+ILPINSV+SINPL+C+P RGDFDGDCLHGY+PQSI+SRI
Sbjct: 394  VVMINRPPSIHQHSLIALSVRILPINSVLSINPLVCSPFRGDFDGDCLHGYIPQSIDSRI 453

Query: 721  ELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVILKKSEMQQLQMFSSCIEVS 900
            EL+ELV+LK QL++GQNG+NLL+L  DSLT+A+L LE GV L + +MQQLQMF       
Sbjct: 454  ELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQMFCPRQLGM 513

Query: 901  PAVEKSKSG-ASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGN 1077
             A+ K+  G   +WTGKQ             + S GVCI +G++++SS GSSWL D S N
Sbjct: 514  TAIVKAPPGNLCYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSSWLRDVSDN 573

Query: 1078 LFQCLLRHCGDRALGVLNDCQELLCEWLTRR 1170
            LF  L++H G   L +L   Q +LCEWL+ R
Sbjct: 574  LFYSLVKHHGGDTLDLLYAAQTVLCEWLSMR 604


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 1475

 Score =  409 bits (1052), Expect = e-112
 Identities = 217/395 (54%), Positives = 270/395 (68%), Gaps = 8/395 (2%)
 Frame = +1

Query: 10   VTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSEK 171
            VTPN HRV E       GQR+  D+ T+ Y+K++DFRG   ELS RVL+  K SKI  +K
Sbjct: 230  VTPNCHRVTEVTHAFSNGQRLVFDDRTRAYKKMVDFRGIAKELSFRVLDCLKTSKINPDK 289

Query: 172  LTNLQKVYEKQ-SANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPFP 348
              N       Q   NDS+SS+SGL+ IKD++LGKR D+SFRMVVVGDP +K  EIG+P P
Sbjct: 290  SVNNDDYMALQRKMNDSSSSSSGLRWIKDVVLGKRNDNSFRMVVVGDPNIKFSEIGIPCP 349

Query: 349  VAQNVLITDHVNKWNWDKLKPFCEYMLHLRGQFTVIRDGQKLSIWVTDMLRAGDLICRPL 528
            +A+ + I++H+  WNWDKL   CE  L  +G   V R+G+ + +  T  LR GD+I RPL
Sbjct: 350  IAERLQISEHLTTWNWDKLNTCCEVRLLEKGDMHVRREGKLVRVRRTKELRIGDIIYRPL 409

Query: 529  IDGDTVLINRPPSIHQHSLISLSVKILPINSVVSINPLICNPLRGDFDGDCLHGYVPQSI 708
             DGDTVLINRPPSIHQHSLI+LSVK+LP  SV++INPLIC P RGDFDGDCLHGYVPQS+
Sbjct: 410  NDGDTVLINRPPSIHQHSLIALSVKVLPATSVLAINPLICAPFRGDFDGDCLHGYVPQSV 469

Query: 709  NSRIELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVILKKSEMQQLQMFSSC 888
            ++R+EL ELV+L  QL+N QNGRNLL+  QDSL +A+L +EDGV+L   +MQQLQMF   
Sbjct: 470  DTRVELRELVALDKQLINVQNGRNLLSFSQDSLVAAHLVMEDGVLLSLQQMQQLQMFCPH 529

Query: 889  IEVSPAVEKSKS-GASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLND 1065
               SPAV K+ S     WTGKQ               S+ V IR G+LI SS GS WL D
Sbjct: 530  QLFSPAVRKAPSLNGCAWTGKQLISMLLPRGFDHECPSSDVYIRDGELI-SSEGSFWLRD 588

Query: 1066 SSGNLFQCLLRHCGDRALGVLNDCQELLCEWLTRR 1170
            + GNLFQ L++ C D+ L  L   QE+LCEWL+ R
Sbjct: 589  TDGNLFQSLIKQCQDQVLDFLYIAQEVLCEWLSMR 623


>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
            lycopersicum]
          Length = 1446

 Score =  408 bits (1049), Expect = e-111
 Identities = 208/391 (53%), Positives = 280/391 (71%), Gaps = 1/391 (0%)
 Frame = +1

Query: 1    SLLVTPNSHRVREFGQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSEKLTN 180
            S L+TPNSHRV EFGQ +  DE+ ++YRKLIDFRG+ N+LS  VL+R K+SKIR+++   
Sbjct: 224  SCLLTPNSHRVTEFGQHMIFDESNRLYRKLIDFRGTANDLSMCVLDRIKVSKIRADRSV- 282

Query: 181  LQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPFPVAQN 360
                      ND  + A+GLK +K+L+L KRT+H+FRMVVVGDP +++ EIG+P  VA+N
Sbjct: 283  ---------INDPNAPATGLKYVKELVLAKRTNHAFRMVVVGDPNIELGEIGIPCHVAEN 333

Query: 361  VLITDHVNKWNWDKLKPFCEYMLHLRGQFTVIRDGQKLSIWVTDMLRAGDLICRPLIDGD 540
            + + + ++  NW+++   C+ M+  RG   V R+G  + I V D L+ GD+I RPL+DGD
Sbjct: 334  LHMAETLSLRNWERMTDLCDLMILQRGGILVRRNGVLVRISVMDGLQKGDIIHRPLVDGD 393

Query: 541  TVLINRPPSIHQHSLISLSVKILPINSVVSINPLICNPLRGDFDGDCLHGYVPQSINSRI 720
             V+INRPPSIHQHSLI+LSV+ILPINSV+SINPL+C+P RGDFDGDCLHGY+PQSI+S I
Sbjct: 394  VVMINRPPSIHQHSLIALSVRILPINSVLSINPLVCSPFRGDFDGDCLHGYIPQSIDSTI 453

Query: 721  ELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVILKKSEMQQLQMFSSCIEVS 900
            EL+ELV+LK QL++GQNG+NLL+L  DSLT+A+L LE GV L + +MQQLQMF       
Sbjct: 454  ELSELVALKQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQMFCPRQLGM 513

Query: 901  PAVEKSKSG-ASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSSGN 1077
             A+ K+  G   +WTGKQ             + S GVCI +G++++SS GSSWL D+S N
Sbjct: 514  TAIVKAPPGNICYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSSWLRDASDN 573

Query: 1078 LFQCLLRHCGDRALGVLNDCQELLCEWLTRR 1170
            LF  L++H G   L +L   Q +LCEWL+ R
Sbjct: 574  LFYSLVKHNGGDTLDLLYAAQTVLCEWLSMR 604


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  405 bits (1040), Expect = e-110
 Identities = 211/396 (53%), Positives = 275/396 (69%), Gaps = 7/396 (1%)
 Frame = +1

Query: 4    LLVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRS 165
            L VTPN+HRV E       GQ +  D+ ++ Y+KL+DFRG+ NELS RVL+  K SK+RS
Sbjct: 266  LPVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTSKLRS 325

Query: 166  EKLTNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPF 345
            EK T+           DSAS  SGLK IK++LLGKRT+HSFRM+VVGDP++++ EIG+P 
Sbjct: 326  EKSTS----------KDSASKMSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPC 375

Query: 346  PVAQNVLITDHVNKWNWDKLKPFCEYMLHLRGQFTVIRDGQKLSIWVTDMLRAGDLICRP 525
             +A+ +LI++H+N WNW+K+   C   L  +GQ  V R G    +   +  +AGD+I RP
Sbjct: 376  HIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLAPVRRMNDFQAGDIIYRP 435

Query: 526  LIDGDTVLINRPPSIHQHSLISLSVKILPINSVVSINPLICNPLRGDFDGDCLHGYVPQS 705
            L DGD VLINRPPSIHQHS+I+LSVK+LP+NSVVSINPL C+P RGDFDGDCLHGY+PQS
Sbjct: 436  LTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIPQS 495

Query: 706  INSRIELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVILKKSEMQQLQMFSS 885
            ++SR+EL+ELV+L  QL+N Q+GRNLL+L QDSL++A+L +EDGV+L   +MQQL+MF  
Sbjct: 496  VDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMFCP 555

Query: 886  CIEVSPAVEKSK-SGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLN 1062
                SPA+ K+       WTGKQ             +   GV I  G+LISSS GS+WL 
Sbjct: 556  YQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGFNYVFPLNGVRISDGELISSSDGSAWLR 615

Query: 1063 DSSGNLFQCLLRHCGDRALGVLNDCQELLCEWLTRR 1170
            D  GNLF  L++ C  +AL  L   QE+LCEWL+ R
Sbjct: 616  DIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMR 651


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  401 bits (1030), Expect = e-109
 Identities = 210/396 (53%), Positives = 276/396 (69%), Gaps = 7/396 (1%)
 Frame = +1

Query: 4    LLVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRS 165
            L VTPN+HRV E       GQ +  D+ ++ Y+KL+DFRG+ NELS RVL+  K SK   
Sbjct: 233  LPVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTSKA-- 290

Query: 166  EKLTNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPF 345
               +NL+   EK ++ DSAS  SGLK IK++LLGKRT+HSFRM+VVGDP++++ EIG+P 
Sbjct: 291  ---SNLRS--EKSTSKDSASKMSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPC 345

Query: 346  PVAQNVLITDHVNKWNWDKLKPFCEYMLHLRGQFTVIRDGQKLSIWVTDMLRAGDLICRP 525
             +A+ +LI++H+N WNW+K+   C   L  +GQ  V R G    +   +  +AGD+I RP
Sbjct: 346  HIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLAPVRRMNDFQAGDIIYRP 405

Query: 526  LIDGDTVLINRPPSIHQHSLISLSVKILPINSVVSINPLICNPLRGDFDGDCLHGYVPQS 705
            L DGD VLINRPPSIHQHS+I+LSVK+LP+NSVVSINPL C+P RGDFDGDCLHGY+PQS
Sbjct: 406  LTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIPQS 465

Query: 706  INSRIELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVILKKSEMQQLQMFSS 885
            ++SR+EL+ELV+L  QL+N Q+GRNLL+L QDSL++A+L +EDGV+L   +MQQL+MF  
Sbjct: 466  VDSRVELSELVALNRQLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMFCP 525

Query: 886  CIEVSPAVEKSK-SGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLN 1062
                SPA+ K+       WTGKQ             +   GV I  G+LISSS GS+WL 
Sbjct: 526  YQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGFNYVFPLNGVRISDGELISSSDGSAWLR 585

Query: 1063 DSSGNLFQCLLRHCGDRALGVLNDCQELLCEWLTRR 1170
            D  GNLF  L++ C  +AL  L   QE+LCEWL+ R
Sbjct: 586  DIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMR 621


>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
            cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
            polymerase II subunit RPB1-B, putative [Theobroma cacao]
          Length = 1484

 Score =  399 bits (1024), Expect = e-108
 Identities = 209/396 (52%), Positives = 273/396 (68%), Gaps = 9/396 (2%)
 Frame = +1

Query: 10   VTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSEK 171
            VTPNSHRV E       GQR+  D+ T++Y+KL DFRG  NELS+ VLE  K+SK+  EK
Sbjct: 237  VTPNSHRVTEIMHASSNGQRLIFDQRTRVYKKLADFRGIANELSSHVLECLKISKLHLEK 296

Query: 172  LTNLQK--VYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPF 345
             +N +   V  ++   DSAS+ SGL+ +KD++LGKR DH FRMV+ G+P +K+ EI +P 
Sbjct: 297  PSNEESALVLAQKRNKDSASNMSGLRYMKDVILGKRNDHCFRMVLTGNPNLKLSEISIPC 356

Query: 346  PVAQNVLITDHVNKWNWDKLKPFCEYMLHLRGQFTVIRDGQKLSIWVTDMLRAGDLICRP 525
             VA+ + I + +N WN ++LK  C+  L  +G+  V R+G+ + I   + L+ GD I RP
Sbjct: 357  HVAERLQIAEQLNNWNEERLKACCDLRLLEKGEIHVRREGRLVRIRHNEKLQVGDTIFRP 416

Query: 526  LIDGDTVLINRPPSIHQHSLISLSVKILPINSVVSINPLICNPLRGDFDGDCLHGYVPQS 705
            L +GD +LINRPPSIHQHSLI+LSVK+LP++SVVSINPLIC+P RGDFDGDCLHGYVPQS
Sbjct: 417  LNNGDIILINRPPSIHQHSLIALSVKVLPVSSVVSINPLICSPFRGDFDGDCLHGYVPQS 476

Query: 706  INSRIELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVILKKSEMQQLQMFSS 885
            I +R+EL ELVSL  QL+NGQ+GRNLL+L  DSLT+AYL  EDGV+L   +MQQL+MF  
Sbjct: 477  IKARVELIELVSLNRQLINGQSGRNLLSLSHDSLTAAYLVKEDGVLLNLFQMQQLEMFCP 536

Query: 886  CIEVSPAVEKSK-SGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLN 1062
                 PA+ K+    +S WTGKQ             +    V IR G+LISSS GS+WL 
Sbjct: 537  NHSPFPAIVKAPLLRSSVWTGKQLLSMLFPLEFDYDFTPNDVVIRNGELISSSEGSTWLR 596

Query: 1063 DSSGNLFQCLLRHCGDRALGVLNDCQELLCEWLTRR 1170
            D+ GNLFQ L++H   + L  L   QE+LCEWL+ R
Sbjct: 597  DADGNLFQSLIKHYQGKVLDFLYAAQEVLCEWLSMR 632


>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1438

 Score =  390 bits (1002), Expect = e-106
 Identities = 207/397 (52%), Positives = 265/397 (66%), Gaps = 9/397 (2%)
 Frame = +1

Query: 7    LVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSE 168
            LVTPN HRV E       GQ +  D+ T+ YRKL+DFRG+ NEL +RVL+  K+SKI  E
Sbjct: 213  LVTPNCHRVTEVMYSFNNGQSLMFDDRTRAYRKLVDFRGTANELGSRVLDCLKISKINKE 272

Query: 169  KLTNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPFP 348
            K        E+Q   DS S  SGL+ IKD++LGKR+DH FRMVVVGDP +K+ EIG+P  
Sbjct: 273  KTGRDSISVEQQKIKDSPSRTSGLRWIKDVVLGKRSDHCFRMVVVGDPNIKLSEIGIPRH 332

Query: 349  VAQNVLITDHVNKWNWDKLKPFCEYMLHL--RGQFTVIRDGQKLSIWVTDMLRAGDLICR 522
            +A+ + I++++N++N++KL  FC+  L    RG   V R+   + I   + L  GD+I R
Sbjct: 333  IAEKMQISENLNQYNFEKLFVFCQLRLGPDGRGDIHVRRNDSLVRIRKPEELEMGDIIYR 392

Query: 523  PLIDGDTVLINRPPSIHQHSLISLSVKILPINSVVSINPLICNPLRGDFDGDCLHGYVPQ 702
             L +GD VLINRPPSIHQHSLI+L+ K+LP+NSVVSINPL C+P +GDFDGDCLHGYVPQ
Sbjct: 393  ALSNGDVVLINRPPSIHQHSLIALTTKVLPVNSVVSINPLCCSPFQGDFDGDCLHGYVPQ 452

Query: 703  SINSRIELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVILKKSEMQQLQMFS 882
            S+ +R+EL ELV+L  QLVNGQ+G NL++L QDSLT+ YL  EDG ++ K +MQQL M  
Sbjct: 453  SVETRVELTELVALDKQLVNGQSGTNLMSLSQDSLTAFYLITEDGTLMNKFQMQQLNMLC 512

Query: 883  SCIEVSPAVEKSKSGASF-WTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWL 1059
                  PAV K  SG S  WT KQ             + S GV I  G+LI+SS GSSWL
Sbjct: 513  PHELPLPAVIKHPSGNSVSWTAKQIVSMFLPADFDYAFPSNGVYISNGELIASSEGSSWL 572

Query: 1060 NDSSGNLFQCLLRHCGDRALGVLNDCQELLCEWLTRR 1170
             D+SGNLFQ L  HC  + L +    Q +LCEWL+ R
Sbjct: 573  RDTSGNLFQSLTEHCHGQVLDIFFSAQGVLCEWLSMR 609


>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
          Length = 1112

 Score =  387 bits (993), Expect = e-105
 Identities = 191/296 (64%), Positives = 230/296 (77%), Gaps = 1/296 (0%)
 Frame = +1

Query: 286  FRMVVVGDPRVKVHEIGLPFPVAQNVLITDHVNKWNWDKLKPFCEYMLHLRGQFTVIRDG 465
            FR VVVGDPR++V EIGLP  +A+N+L++D++  WNWDKL+  C+ ML   GQF+V RDG
Sbjct: 1    FRTVVVGDPRIRVDEIGLPIEIAKNMLVSDNIYLWNWDKLESCCDLMLRRNGQFSVTRDG 60

Query: 466  QKLSIWVTDMLRAGDLICRPLIDGDTVLINRPPSIHQHSLISLSVKILPINSVVSINPLI 645
            QK  +   DMLR GD I RPLIDGD VLINRPPSIHQHSLI+LSVKILPINSVVSINPL 
Sbjct: 61   QKTCVRSADMLRTGDSIYRPLIDGDIVLINRPPSIHQHSLIALSVKILPINSVVSINPLT 120

Query: 646  CNPLRGDFDGDCLHGYVPQSINSRIELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLF 825
            C+PLRGDFDGDCLHGYVPQS+N+R+EL ELV+L  QLVNGQ+G+NLL+L QDSLT+A+L 
Sbjct: 121  CSPLRGDFDGDCLHGYVPQSVNTRVELKELVTLNKQLVNGQSGQNLLSLSQDSLTAAHLI 180

Query: 826  LEDGVILKKSEMQQLQMFSSCIEVSPAVEKSKS-GASFWTGKQXXXXXXXXXXXXTYASA 1002
             +DGV L K EMQQLQMFS+ I + PA+ +S S   SFWTGKQ            + AS 
Sbjct: 181  SQDGVFLNKPEMQQLQMFSAWIPMLPAIIQSTSRETSFWTGKQLFSQLLPLDFEFSNASN 240

Query: 1003 GVCIRKGQLISSSHGSSWLNDSSGNLFQCLLRHCGDRALGVLNDCQELLCEWLTRR 1170
            GV I+ G+L+S S GSSWL DS  NLFQCLLRHC ++ L +L+  QE+LCEWL+RR
Sbjct: 241  GVGIKHGELVSFSDGSSWLRDSGENLFQCLLRHCPEKTLDILHAAQEVLCEWLSRR 296


>ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Glycine
            max]
          Length = 1369

 Score =  385 bits (988), Expect = e-104
 Identities = 197/395 (49%), Positives = 278/395 (70%), Gaps = 10/395 (2%)
 Frame = +1

Query: 10   VTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSEK 171
            VTPN HRV E       G R++ D+ T+  +KL+DFRG+PNELS+RVL+  ++SK+  +K
Sbjct: 134  VTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRGTPNELSSRVLDCLRISKLNPDK 193

Query: 172  LTN-LQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPFP 348
              N +    +++   ++A ++SGL+ IKD++LGKR D S R VVVGDP +++ E+G+P  
Sbjct: 194  TPNSIFADIQQRKIGENACNSSGLRWIKDVVLGKRNDSSLRTVVVGDPDLELSEVGIPCH 253

Query: 349  VAQNVLITDHVNKWNWDKLKPFCEYMLHLRGQFTVIRDGQKLSIWVTDMLRAGDLICRPL 528
            +A+++ ++++VN+ N +KL   CE  L  +G+  V R+G K+ ++  + L+ GD I RPL
Sbjct: 254  IAESLQVSEYVNRQNREKLLYCCELRLLEKGKIDVCRNGSKVHLYKKEDLQIGDKIYRPL 313

Query: 529  IDGDTVLINRPPSIHQHSLISLSVKILPINSVVSINPLICNPLRGDFDGDCLHGYVPQSI 708
             DGD VLINRPPSIHQHS+I+L+V++LPI+SVV INPL C+PLRGDFDGDCLHGY+PQS+
Sbjct: 314  ADGDKVLINRPPSIHQHSMIALTVRVLPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSV 373

Query: 709  NSRIELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVILKKSEMQQLQMFSSC 888
             +RIELNELV+L  QL+NGQ+GRNLL+L QDSLT+AYL +EDGV+L   +MQQLQM S  
Sbjct: 374  TARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSIS 433

Query: 889  IE--VSPAVEKS-KSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWL 1059
             +  + PAV K+  S +S W+GKQ            ++ S GV +  G+L+SSS  S WL
Sbjct: 434  DKRLIPPAVVKAPSSNSSLWSGKQIFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWL 493

Query: 1060 NDSSGNLFQCLLRHCGDRALGVLNDCQELLCEWLT 1164
             DS  N+FQ L+ H   + L  L   Q++LCEWL+
Sbjct: 494  RDSDYNVFQSLVEHYQGKTLNFLYTAQKVLCEWLS 528


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score =  382 bits (980), Expect = e-103
 Identities = 207/399 (51%), Positives = 271/399 (67%), Gaps = 9/399 (2%)
 Frame = +1

Query: 1    SLLVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSK-I 159
            S  VTPNSHRV E       GQR+  DE T+ Y+K++DFRG+ NEL +RVL+  K+SK I
Sbjct: 232  SFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISKAI 291

Query: 160  RSEKLTNLQKV-YEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIG 336
             +  +  L  V Y ++   D+A+S+SGL+ IKD++LGKR+DH FRMVVVGDP +++ EIG
Sbjct: 292  YNIFVFCLNHVNYYQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIG 351

Query: 337  LPFPVAQNVLITDHVNKWNWDKLKPFCEYMLHLRGQFTVIRDGQKLSIWVTDMLRAGDLI 516
            +P  VA+ + I++H++ WN  KL   C   L  +G+  V R+G+ + +     L  GD I
Sbjct: 352  IPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRREGRLVRVRNVLELNMGDTI 411

Query: 517  CRPLIDGDTVLINRPPSIHQHSLISLSVKILPINSVVSINPLICNPLRGDFDGDCLHGYV 696
             RPL DGD VL+NRPPSIHQHSLI+LSVK+LP+++V+S+NPL C+P RGDFDGDCLHGYV
Sbjct: 412  YRPLADGDIVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYV 471

Query: 697  PQSINSRIELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVILKKSEMQQLQM 876
            PQS+ +R+E+ ELVSL  QL NGQ+GRNLL+L  DSLT+A+L LEDGV L   +MQQLQM
Sbjct: 472  PQSLEARVEVRELVSLDKQLTNGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQM 531

Query: 877  FSSCIEVSPAVEKSKSGAS-FWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSS 1053
             +    + PA+ KS    +  WTGKQ            +  S  V I KG+LI SS GS 
Sbjct: 532  LTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFDYSSPSHNVFIEKGELI-SSEGSY 590

Query: 1054 WLNDSSGNLFQCLLRHCGDRALGVLNDCQELLCEWLTRR 1170
            WL DS  NLFQ L+ HC  + L  L D Q +LCEWL+ R
Sbjct: 591  WLRDSGRNLFQALIEHCEGKTLDYLRDAQGVLCEWLSTR 629


>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
            [Cicer arietinum]
          Length = 1474

 Score =  379 bits (974), Expect = e-102
 Identities = 195/394 (49%), Positives = 270/394 (68%), Gaps = 8/394 (2%)
 Frame = +1

Query: 7    LVTPNSHRVREFGQRIT------VDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSE 168
            LV PN HRV E   R++       D  T+  +KL+DFRG+ NELS+RVL+  + SKI  +
Sbjct: 230  LVAPNCHRVTEVPHRLSGGYPLSFDNRTRACKKLVDFRGTANELSSRVLDCLRFSKINPD 289

Query: 169  KL-TNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPF 345
            K  +N+    + +   ++A ++SGL+ +KD++LGKR D SFR VVVGDP +++ EIGLP 
Sbjct: 290  KTPSNVFTEIQLRKVGENACNSSGLRWMKDIVLGKRNDSSFRTVVVGDPDLELSEIGLPC 349

Query: 346  PVAQNVLITDHVNKWNWDKLKPFCEYMLHLRGQFTVIRDGQKLSIWVTDMLRAGDLICRP 525
             +A+ + ++++VN+ N   L   CE  L  +GQ  V R G+ + ++  + ++ GD+  RP
Sbjct: 350  QIAEGLQVSEYVNRQNKQNLLYCCELRLLEKGQINVCRKGRPVVLFKKEDVQIGDIFYRP 409

Query: 526  LIDGDTVLINRPPSIHQHSLISLSVKILPINSVVSINPLICNPLRGDFDGDCLHGYVPQS 705
            L+DGD VLINRPPSIHQHS+I+L+V++LPI+SVVSINPL C+PLRGDFDGDCLHGY+PQS
Sbjct: 410  LVDGDRVLINRPPSIHQHSMIALTVRVLPISSVVSINPLCCSPLRGDFDGDCLHGYIPQS 469

Query: 706  INSRIELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVILKKSEMQQLQMFSS 885
            + +R+ELNELV+L  QL+NGQ+GRNLL+L QDSLT+AYL LEDGV+L   +MQQLQM  S
Sbjct: 470  VGARVELNELVALDKQLINGQSGRNLLSLSQDSLTAAYLLLEDGVLLNVYQMQQLQMHCS 529

Query: 886  CIEVSPAVEKS-KSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLN 1062
               + PA+ K+  S  S W+GKQ             + S GV +  G+LIS S  S WL 
Sbjct: 530  RKLIPPAIVKAPSSNTSCWSGKQLFSMLMPSSFDYAFPSDGVFVCDGELISCSEASGWLR 589

Query: 1063 DSSGNLFQCLLRHCGDRALGVLNDCQELLCEWLT 1164
            DS  N+FQ L+ H   + L +L+  Q+ LCEWL+
Sbjct: 590  DSDNNVFQSLVEHFQGKTLDILHGAQKALCEWLS 623


>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
            [Cicer arietinum] gi|502160026|ref|XP_004511608.1|
            PREDICTED: DNA-directed RNA polymerase D subunit 1-like
            isoform X2 [Cicer arietinum]
            gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
            RNA polymerase D subunit 1-like isoform X3 [Cicer
            arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
            DNA-directed RNA polymerase D subunit 1-like isoform X4
            [Cicer arietinum]
          Length = 1475

 Score =  379 bits (974), Expect = e-102
 Identities = 195/394 (49%), Positives = 270/394 (68%), Gaps = 8/394 (2%)
 Frame = +1

Query: 7    LVTPNSHRVREFGQRIT------VDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSE 168
            LV PN HRV E   R++       D  T+  +KL+DFRG+ NELS+RVL+  + SKI  +
Sbjct: 230  LVAPNCHRVTEVPHRLSGGYPLSFDNRTRACKKLVDFRGTANELSSRVLDCLRFSKINPD 289

Query: 169  KL-TNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPF 345
            K  +N+    + +   ++A ++SGL+ +KD++LGKR D SFR VVVGDP +++ EIGLP 
Sbjct: 290  KTPSNVFTEIQLRKVGENACNSSGLRWMKDIVLGKRNDSSFRTVVVGDPDLELSEIGLPC 349

Query: 346  PVAQNVLITDHVNKWNWDKLKPFCEYMLHLRGQFTVIRDGQKLSIWVTDMLRAGDLICRP 525
             +A+ + ++++VN+ N   L   CE  L  +GQ  V R G+ + ++  + ++ GD+  RP
Sbjct: 350  QIAEGLQVSEYVNRQNKQNLLYCCELRLLEKGQINVCRKGRPVVLFKKEDVQIGDIFYRP 409

Query: 526  LIDGDTVLINRPPSIHQHSLISLSVKILPINSVVSINPLICNPLRGDFDGDCLHGYVPQS 705
            L+DGD VLINRPPSIHQHS+I+L+V++LPI+SVVSINPL C+PLRGDFDGDCLHGY+PQS
Sbjct: 410  LVDGDRVLINRPPSIHQHSMIALTVRVLPISSVVSINPLCCSPLRGDFDGDCLHGYIPQS 469

Query: 706  INSRIELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVILKKSEMQQLQMFSS 885
            + +R+ELNELV+L  QL+NGQ+GRNLL+L QDSLT+AYL LEDGV+L   +MQQLQM  S
Sbjct: 470  VGARVELNELVALDKQLINGQSGRNLLSLSQDSLTAAYLLLEDGVLLNVYQMQQLQMHCS 529

Query: 886  CIEVSPAVEKS-KSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLN 1062
               + PA+ K+  S  S W+GKQ             + S GV +  G+LIS S  S WL 
Sbjct: 530  RKLIPPAIVKAPSSNTSCWSGKQLFSMLMPSSFDYAFPSDGVFVCDGELISCSEASGWLR 589

Query: 1063 DSSGNLFQCLLRHCGDRALGVLNDCQELLCEWLT 1164
            DS  N+FQ L+ H   + L +L+  Q+ LCEWL+
Sbjct: 590  DSDNNVFQSLVEHFQGKTLDILHGAQKALCEWLS 623


>ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X4
            [Glycine max]
          Length = 1381

 Score =  379 bits (973), Expect = e-102
 Identities = 197/395 (49%), Positives = 274/395 (69%), Gaps = 10/395 (2%)
 Frame = +1

Query: 10   VTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSEK 171
            VTPN HRV E       G R++ D+ T+  +KL+DFRG+ NELS+RVL+  ++SK+  +K
Sbjct: 143  VTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRGTANELSSRVLDCLRISKLNPDK 202

Query: 172  LTN-LQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPFP 348
              N +    +++   ++A ++SGL+ IKD++LGKR D SFR VVVGDP +++ EIG+P  
Sbjct: 203  TPNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDSSFRTVVVGDPDLELSEIGIPCH 262

Query: 349  VAQNVLITDHVNKWNWDKLKPFCEYMLHLRGQFTVIRDGQKLSIWVTDMLRAGDLICRPL 528
            +A+++ ++++VN+ N +KL   CE  L  +G+  V R G  + ++  + L+ GD   RPL
Sbjct: 263  IAESLQVSEYVNRQNREKLLYCCELHLLEKGKINVCRKGSIVHLYKKEDLQIGDKFYRPL 322

Query: 529  IDGDTVLINRPPSIHQHSLISLSVKILPINSVVSINPLICNPLRGDFDGDCLHGYVPQSI 708
             DGD VLINRPPSIHQHS+ISL+V++LPI+SVV INPL C+PLRGDFDGDCLHGY+PQS+
Sbjct: 323  ADGDKVLINRPPSIHQHSMISLTVRVLPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSV 382

Query: 709  NSRIELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVILKKSEMQQLQMFSSC 888
             +RIELNELV+L  QL+NGQ+GRNLL+L QDSLT+AYL +EDGV+L   +MQQLQM S  
Sbjct: 383  TARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSIS 442

Query: 889  IE--VSPAVEKS-KSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWL 1059
             +  + PAV K+  S +S W GKQ            ++ S GV +  G+L+SSS  S WL
Sbjct: 443  NKRLIPPAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWL 502

Query: 1060 NDSSGNLFQCLLRHCGDRALGVLNDCQELLCEWLT 1164
             DS  N+FQ L+ H   + L  L   Q++LCEWL+
Sbjct: 503  RDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEWLS 537


>ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
            [Glycine max]
          Length = 1455

 Score =  379 bits (973), Expect = e-102
 Identities = 197/395 (49%), Positives = 274/395 (69%), Gaps = 10/395 (2%)
 Frame = +1

Query: 10   VTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSEK 171
            VTPN HRV E       G R++ D+ T+  +KL+DFRG+ NELS+RVL+  ++SK+  +K
Sbjct: 220  VTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRGTANELSSRVLDCLRISKLNPDK 279

Query: 172  LTN-LQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPFP 348
              N +    +++   ++A ++SGL+ IKD++LGKR D SFR VVVGDP +++ EIG+P  
Sbjct: 280  TPNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDSSFRTVVVGDPDLELSEIGIPCH 339

Query: 349  VAQNVLITDHVNKWNWDKLKPFCEYMLHLRGQFTVIRDGQKLSIWVTDMLRAGDLICRPL 528
            +A+++ ++++VN+ N +KL   CE  L  +G+  V R G  + ++  + L+ GD   RPL
Sbjct: 340  IAESLQVSEYVNRQNREKLLYCCELHLLEKGKINVCRKGSIVHLYKKEDLQIGDKFYRPL 399

Query: 529  IDGDTVLINRPPSIHQHSLISLSVKILPINSVVSINPLICNPLRGDFDGDCLHGYVPQSI 708
             DGD VLINRPPSIHQHS+ISL+V++LPI+SVV INPL C+PLRGDFDGDCLHGY+PQS+
Sbjct: 400  ADGDKVLINRPPSIHQHSMISLTVRVLPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSV 459

Query: 709  NSRIELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVILKKSEMQQLQMFSSC 888
             +RIELNELV+L  QL+NGQ+GRNLL+L QDSLT+AYL +EDGV+L   +MQQLQM S  
Sbjct: 460  TARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSIS 519

Query: 889  IE--VSPAVEKS-KSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWL 1059
             +  + PAV K+  S +S W GKQ            ++ S GV +  G+L+SSS  S WL
Sbjct: 520  NKRLIPPAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWL 579

Query: 1060 NDSSGNLFQCLLRHCGDRALGVLNDCQELLCEWLT 1164
             DS  N+FQ L+ H   + L  L   Q++LCEWL+
Sbjct: 580  RDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEWLS 614


>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Glycine max]
          Length = 1457

 Score =  379 bits (973), Expect = e-102
 Identities = 197/395 (49%), Positives = 274/395 (69%), Gaps = 10/395 (2%)
 Frame = +1

Query: 10   VTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSEK 171
            VTPN HRV E       G R++ D+ T+  +KL+DFRG+ NELS+RVL+  ++SK+  +K
Sbjct: 220  VTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRGTANELSSRVLDCLRISKLNPDK 279

Query: 172  LTN-LQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPFP 348
              N +    +++   ++A ++SGL+ IKD++LGKR D SFR VVVGDP +++ EIG+P  
Sbjct: 280  TPNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDSSFRTVVVGDPDLELSEIGIPCH 339

Query: 349  VAQNVLITDHVNKWNWDKLKPFCEYMLHLRGQFTVIRDGQKLSIWVTDMLRAGDLICRPL 528
            +A+++ ++++VN+ N +KL   CE  L  +G+  V R G  + ++  + L+ GD   RPL
Sbjct: 340  IAESLQVSEYVNRQNREKLLYCCELHLLEKGKINVCRKGSIVHLYKKEDLQIGDKFYRPL 399

Query: 529  IDGDTVLINRPPSIHQHSLISLSVKILPINSVVSINPLICNPLRGDFDGDCLHGYVPQSI 708
             DGD VLINRPPSIHQHS+ISL+V++LPI+SVV INPL C+PLRGDFDGDCLHGY+PQS+
Sbjct: 400  ADGDKVLINRPPSIHQHSMISLTVRVLPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSV 459

Query: 709  NSRIELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVILKKSEMQQLQMFSSC 888
             +RIELNELV+L  QL+NGQ+GRNLL+L QDSLT+AYL +EDGV+L   +MQQLQM S  
Sbjct: 460  TARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSIS 519

Query: 889  IE--VSPAVEKS-KSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWL 1059
             +  + PAV K+  S +S W GKQ            ++ S GV +  G+L+SSS  S WL
Sbjct: 520  NKRLIPPAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWL 579

Query: 1060 NDSSGNLFQCLLRHCGDRALGVLNDCQELLCEWLT 1164
             DS  N+FQ L+ H   + L  L   Q++LCEWL+
Sbjct: 580  RDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEWLS 614


>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Glycine max]
          Length = 1458

 Score =  379 bits (973), Expect = e-102
 Identities = 197/395 (49%), Positives = 274/395 (69%), Gaps = 10/395 (2%)
 Frame = +1

Query: 10   VTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSEK 171
            VTPN HRV E       G R++ D+ T+  +KL+DFRG+ NELS+RVL+  ++SK+  +K
Sbjct: 220  VTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRGTANELSSRVLDCLRISKLNPDK 279

Query: 172  LTN-LQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPFP 348
              N +    +++   ++A ++SGL+ IKD++LGKR D SFR VVVGDP +++ EIG+P  
Sbjct: 280  TPNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDSSFRTVVVGDPDLELSEIGIPCH 339

Query: 349  VAQNVLITDHVNKWNWDKLKPFCEYMLHLRGQFTVIRDGQKLSIWVTDMLRAGDLICRPL 528
            +A+++ ++++VN+ N +KL   CE  L  +G+  V R G  + ++  + L+ GD   RPL
Sbjct: 340  IAESLQVSEYVNRQNREKLLYCCELHLLEKGKINVCRKGSIVHLYKKEDLQIGDKFYRPL 399

Query: 529  IDGDTVLINRPPSIHQHSLISLSVKILPINSVVSINPLICNPLRGDFDGDCLHGYVPQSI 708
             DGD VLINRPPSIHQHS+ISL+V++LPI+SVV INPL C+PLRGDFDGDCLHGY+PQS+
Sbjct: 400  ADGDKVLINRPPSIHQHSMISLTVRVLPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSV 459

Query: 709  NSRIELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVILKKSEMQQLQMFSSC 888
             +RIELNELV+L  QL+NGQ+GRNLL+L QDSLT+AYL +EDGV+L   +MQQLQM S  
Sbjct: 460  TARIELNELVALDRQLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSIS 519

Query: 889  IE--VSPAVEKS-KSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWL 1059
             +  + PAV K+  S +S W GKQ            ++ S GV +  G+L+SSS  S WL
Sbjct: 520  NKRLIPPAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWL 579

Query: 1060 NDSSGNLFQCLLRHCGDRALGVLNDCQELLCEWLT 1164
             DS  N+FQ L+ H   + L  L   Q++LCEWL+
Sbjct: 580  RDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEWLS 614


>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
            gi|557542783|gb|ESR53761.1| hypothetical protein
            CICLE_v10018489mg [Citrus clementina]
          Length = 1443

 Score =  364 bits (934), Expect = 4e-98
 Identities = 194/393 (49%), Positives = 259/393 (65%), Gaps = 6/393 (1%)
 Frame = +1

Query: 10   VTPNSHRVREFG------QRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSEK 171
            VTPN+HRV E        +++  D  T+  +K++D+RG   ELS  V +  K+SK+  +K
Sbjct: 228  VTPNNHRVTEVPHAFSHEKKLFFDNWTRHLKKMVDYRGRDIELSHLVQDCLKISKLHLDK 287

Query: 172  LTNLQKVYEKQSANDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPRVKVHEIGLPFPV 351
             +       +Q  N   S++SGL+ IKD++LGKR D  FRMVV GDP +K+ EIG+P  V
Sbjct: 288  SSRKDSAEVRQKKNIDISNSSGLRWIKDVVLGKRNDDCFRMVVTGDPNIKLKEIGIPCQV 347

Query: 352  AQNVLITDHVNKWNWDKLKPFCEYMLHLRGQFTVIRDGQKLSIWVTDMLRAGDLICRPLI 531
            A+ + I++ +N WNW++L     + L  +G+  V R G  + I   D L  GD+I RPL 
Sbjct: 348  AERLQISERLNSWNWERLSVCISFRLLEKGELYVCRKGGLVRIRRIDALELGDIIYRPLT 407

Query: 532  DGDTVLINRPPSIHQHSLISLSVKILPINSVVSINPLICNPLRGDFDGDCLHGYVPQSIN 711
            DGD VLINRPPSIH HSLI+L+VK+LPI+SVV+INPL C+P  GDFDGDCLHGY+PQ+I 
Sbjct: 408  DGDIVLINRPPSIHPHSLIALTVKVLPISSVVTINPLCCSPFHGDFDGDCLHGYIPQAIG 467

Query: 712  SRIELNELVSLKNQLVNGQNGRNLLALGQDSLTSAYLFLEDGVILKKSEMQQLQMFSSCI 891
            +R+EL ELV+L  QL+N Q+GRNLL+LGQDSLT+A+L +EDGV+L   +MQQLQMF    
Sbjct: 468  ARVELTELVALDKQLINQQSGRNLLSLGQDSLTAAHLLMEDGVLLSHLQMQQLQMFCPHR 527

Query: 892  EVSPAVEKSKSGASFWTGKQXXXXXXXXXXXXTYASAGVCIRKGQLISSSHGSSWLNDSS 1071
             +SP + K  S  S W+GKQ            T+ S  V I  G+LI S+ GSSWL D  
Sbjct: 528  FLSPDIFKI-SKDSVWSGKQLFSMLLPPDFEYTFPSKDVYISGGKLI-SAEGSSWLRDYE 585

Query: 1072 GNLFQCLLRHCGDRALGVLNDCQELLCEWLTRR 1170
            GNLFQ L++   D+ L  L   QE+LCEWL+ R
Sbjct: 586  GNLFQYLIKRYRDKVLDFLYAAQEVLCEWLSVR 618