BLASTX nr result

ID: Mentha25_contig00033541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00033541
         (356 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU33604.1| hypothetical protein MIMGU_mgv1a022333mg, partial...    66   4e-09
ref|XP_004244155.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_006360089.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_007132964.1| hypothetical protein PHAVU_011G1400001g, par...    56   6e-06

>gb|EYU33604.1| hypothetical protein MIMGU_mgv1a022333mg, partial [Mimulus
           guttatus]
          Length = 332

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
 Frame = +1

Query: 148 EMDLNWDDEIENPEDKTVVS----PWLDSMTGHMISARRKEISQDKKQKWVFTHSLSYRY 315
           EMDL WDDE E  + K + S    PWL+ MT + I+  RKE S+D+KQKWVF  + + R+
Sbjct: 1   EMDLPWDDE-ERGDTKVIGSVLDMPWLEKMTNNSIAEWRKEFSRDRKQKWVFKSTQTNRF 59

Query: 316 NSLINMFATKMG 351
             ++N+ A K+G
Sbjct: 60  GRMVNVCADKLG 71


>ref|XP_004244155.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Solanum lycopersicum]
          Length = 850

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
 Frame = +1

Query: 43  SLDSIVCGSLTSDCTIDEDESAEQLASDASSILYDEMDLNWDDEIENPE----DKTVVSP 210
           SL  I   S       D  ES++ L+S+ SSIL  ++D    D  E+      +  +  P
Sbjct: 54  SLSEIAAESFNFKSAADYGESSKLLSSEISSILCGDLDSYLSDPEESSNASCLENVLDVP 113

Query: 211 WLDSMTGHMISARRKEISQDKKQKWVFTHSLSYRYNSLINMFATKMGS 354
           WL ++    IS RRKEI++++K+KW F  S   R++ L+   A K+G+
Sbjct: 114 WLSNVEKCSISLRRKEIARERKEKWTFKSSQVGRFHQLVEQCACKLGT 161


>ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Vitis vinifera]
          Length = 848

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/93 (34%), Positives = 54/93 (58%)
 Frame = +1

Query: 76  SDCTIDEDESAEQLASDASSILYDEMDLNWDDEIENPEDKTVVSPWLDSMTGHMISARRK 255
           S+ T   ++S +QL+   SSIL      +     E P +K +  PW  +++ + IS RRK
Sbjct: 62  SETTSHPEDSTKQLSQTLSSILCGGSPDSQLTNDEKPLEKVLDVPWFPTLSHNNISLRRK 121

Query: 256 EISQDKKQKWVFTHSLSYRYNSLINMFATKMGS 354
           E+S+++KQKWVF ++   R + L+   A K+G+
Sbjct: 122 EVSRERKQKWVFKNTQGGRLDRLVKTCAQKLGT 154


>ref|XP_006360089.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565388658|ref|XP_006360090.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565388660|ref|XP_006360091.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like isoform X3 [Solanum tuberosum]
          Length = 850

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
 Frame = +1

Query: 43  SLDSIVCGSLTSDCTIDEDESAEQLASDASSILYDEMDLNWDDEIENPEDKTVVS----P 210
           SL  I   S       D  ES++ L+S+ SSIL  +++    D  E+     + +    P
Sbjct: 54  SLSEIAAESFNFKSAADYGESSKLLSSELSSILCGDLNSYLSDPEESSNGSCLENVLDVP 113

Query: 211 WLDSMTGHMISARRKEISQDKKQKWVFTHSLSYRYNSLINMFATKMGS 354
           WL ++    +S RRKEI++++K+KW F  +   R++ L+   A K+G+
Sbjct: 114 WLSNVEKCNMSLRRKEIARERKEKWTFKSTQIGRFHQLVKQCACKLGT 161


>ref|XP_007132964.1| hypothetical protein PHAVU_011G1400001g, partial [Phaseolus
           vulgaris] gi|561005964|gb|ESW04958.1| hypothetical
           protein PHAVU_011G1400001g, partial [Phaseolus vulgaris]
          Length = 404

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
 Frame = +1

Query: 88  IDEDESAEQLASDASSILYDEMDLNWD-DEIENPED-KTVVS-PWLDSMTGHMISARRKE 258
           +DED    QL    S+IL  + D     DE+++ E  K+VV  PW+  M    +S +RKE
Sbjct: 64  VDEDGKTAQL----SAILCSKQDKGSGYDEVDHEEKWKSVVEIPWIPDMPHGKLSGKRKE 119

Query: 259 ISQDKKQKWVFTHSLSYRYNSLINMFATKMGS 354
           + +++K KW+F +S   R+N LI   A K+G+
Sbjct: 120 LGRERKLKWIFKYSGDVRFNRLIKFCADKLGT 151


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