BLASTX nr result

ID: Mentha25_contig00032264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00032264
         (395 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU18211.1| hypothetical protein MIMGU_mgv1a000373mg [Mimulus...    84   3e-14
emb|CBI17913.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]      57   2e-06

>gb|EYU18211.1| hypothetical protein MIMGU_mgv1a000373mg [Mimulus guttatus]
          Length = 1207

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 57/141 (40%), Positives = 77/141 (54%), Gaps = 10/141 (7%)
 Frame = -2

Query: 394  SKPVKITENESDEDGAVKEQTSDE---NFKLSTTNETEAPKDHISDRGKEVEKVVTESSN 224
            +KP +I ENE D     ++QT      N  L    + E  +D+ ++RGK VE +V E S 
Sbjct: 1047 TKPSEIVENELDSRAFSEKQTQCSEIANLFLPGFQKQEEVEDYATERGKAVEPIVEEHSK 1106

Query: 223  HTQKLDEVNKSGT-GQSSSTHL---IEDNVDPIQAMLMDMIPMLARKKVE---IVEPARE 65
              Q+ D + + G+ GQ S TH    IED VDP+QAML +M+P+LA KK E   I  P   
Sbjct: 1107 FGQRFDGIKEVGSSGQESGTHYSDRIEDAVDPVQAMLFNMLPILATKKAESDSITAPL-- 1164

Query: 64   EAKIRAPDPVNEEAEVGKDAE 2
            E K   P+P  EE +V  D E
Sbjct: 1165 EVKTGDPNPTREEEKVLLDGE 1185


>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 49/145 (33%), Positives = 66/145 (45%), Gaps = 21/145 (14%)
 Frame = -2

Query: 391  KPVKITENESDEDGAVKEQTSDENFKLSTTN--------------ETEAPKD-HISDRGK 257
            KP KI ENESD   +  E+  +E  K+   +              ETE  +D   S RGK
Sbjct: 1004 KPPKIYENESDASDS-GEKMEEEGTKMGGNHAIHGVECKECPEIQETEIVEDSESSQRGK 1062

Query: 256  EVEKVVTESSNHTQKLDEV------NKSGTGQSSSTHLIEDNVDPIQAMLMDMIPMLARK 95
              EK V   +   + LD        +++    S  T  +E  VDP+QAML+DMIP L  K
Sbjct: 1063 TEEKEVALDNVREKWLDRAQDIELDSENKVDNSKKTEKLEVMVDPVQAMLLDMIPSLGVK 1122

Query: 94   KVEIVEPAREEAKIRAPDPVNEEAE 20
            K E   P  ++ K     PV + AE
Sbjct: 1123 KAESTNPIIDDEK----PPVEQGAE 1143


>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 49/145 (33%), Positives = 66/145 (45%), Gaps = 21/145 (14%)
 Frame = -2

Query: 391  KPVKITENESDEDGAVKEQTSDENFKLSTTN--------------ETEAPKD-HISDRGK 257
            KP KI ENESD   +  E+  +E  K+   +              ETE  +D   S RGK
Sbjct: 1003 KPPKIYENESDASDS-GEKMEEEGTKMGGNHAIHGVECKECPEIQETEIVEDSESSQRGK 1061

Query: 256  EVEKVVTESSNHTQKLDEV------NKSGTGQSSSTHLIEDNVDPIQAMLMDMIPMLARK 95
              EK V   +   + LD        +++    S  T  +E  VDP+QAML+DMIP L  K
Sbjct: 1062 TEEKEVALDNVREKWLDRAQDIELDSENKVDNSKKTEKLEVMVDPVQAMLLDMIPSLGVK 1121

Query: 94   KVEIVEPAREEAKIRAPDPVNEEAE 20
            K E   P  ++ K     PV + AE
Sbjct: 1122 KAESTNPIIDDEK----PPVEQGAE 1142


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