BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00032169
         (429 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_619654.1| putative replicase [Grapevine virus B] gi|10611...   158   8e-37
gb|ABU62819.1| replicase [Grapevine virus B]                          157   2e-36
gb|ADE62745.1| replicase [Grapevine virus B]                          156   2e-36
gb|AFV34758.1| replicase [Grapevine virus B]                          155   7e-36
gb|AET36885.1| putative replicase, partial [Actinidia virus A]        124   2e-26
ref|YP_004935358.1| ORF1 gene product [Actinidia virus B] gi|356...   119   6e-25
gb|ADG57799.1| replicase [Grapevine virus B]                          102   7e-20
gb|ABH06996.2| replication-related protein [Grapevine virus A]         84   2e-14
ref|NP_619662.1| putative replicase [Grapevine virus A] gi|81937...    81   2e-13
gb|ACA52189.1| 194 kDa protein [Grapevine virus A]                     80   2e-13
gb|ABH06983.2| 194 kDa protein [Grapevine virus A]                     80   2e-13
gb|ABH06988.2| 194 kDa protein [Grapevine virus A]                     80   4e-13
gb|ABL14358.1| 194 kDa protein [Grapevine virus A]                     80   4e-13
gb|AFV73358.1| 195 kDa replicase [Grapevine virus A]                   79   6e-13
gb|ABG37965.1| putative replicase [Grapevine virus A]                  79   6e-13
gb|ABH07008.1| putative replicase [Grapevine virus A]                  79   8e-13
gb|AGT17853.1| putative replicase [Grapevine virus A]                  78   1e-12
gb|ABH06992.2| 194 kDa protein [Grapevine virus A]                     78   1e-12
gb|AAO17778.1| RNA-dependent RNA polymerase [Grapevine virus A]        75   7e-12
ref|YP_006590065.1| replicase [Grapevine virus F] gi|401620150|g...    75   7e-12

>ref|NP_619654.1| putative replicase [Grapevine virus B] gi|1061119|emb|CAA53196.1|
            putative replicase [Grapevine virus B]
          Length = 1707

 Score =  158 bits (399), Expect = 8e-37
 Identities = 75/141 (53%), Positives = 96/141 (68%)
 Frame = +3

Query: 6    FRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFTG 185
            ++EL C+A+++H+S + GP+    F NAL  N DI +  Y   E+RAK L+ SF+EGFTG
Sbjct: 837  YKELSCYAEDDHISEWSGPRKETTFSNALSMNPDIRVVKYEVCEQRAKKLVDSFQEGFTG 896

Query: 186  VCLNKFQKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKAL 365
            VCLNKFQK K S +   G     +  +LGFAGSGKS+YPQ +L    Y ++LVIVPRKAL
Sbjct: 897  VCLNKFQKQKSSFNLVNGKELIDVHLTLGFAGSGKSFYPQCVLKNSHYANSLVIVPRKAL 956

Query: 366  CMDWRNKVHKSIDVATFESVF 428
            C DW NKVH  + V TFES F
Sbjct: 957  CSDWSNKVHPDVKVVTFESAF 977


>gb|ABU62819.1| replicase [Grapevine virus B]
          Length = 1709

 Score =  157 bits (396), Expect = 2e-36
 Identities = 74/142 (52%), Positives = 97/142 (68%)
 Frame = +3

Query: 3    NFRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFT 182
            +++EL C+A+++H+S + GP+   +F NAL  N DI +  Y   E+RAK L+ SF+EGFT
Sbjct: 838  SYKELSCYAEDDHISEWSGPRKETSFSNALSMNPDIRVVKYEVCEQRAKKLVNSFQEGFT 897

Query: 183  GVCLNKFQKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKA 362
            GVCLNKFQK K S +   G     +  +LGFAGSGKS+YPQ +L    Y +TLVIVPRKA
Sbjct: 898  GVCLNKFQKQKSSFNLVNGKELIDIHLTLGFAGSGKSFYPQCVLKNSSYSNTLVIVPRKA 957

Query: 363  LCMDWRNKVHKSIDVATFESVF 428
            LC DW NKVH  + V T+E  F
Sbjct: 958  LCSDWINKVHPDVKVVTYECAF 979


>gb|ADE62745.1| replicase [Grapevine virus B]
          Length = 1709

 Score =  156 bits (395), Expect = 2e-36
 Identities = 75/141 (53%), Positives = 97/141 (68%)
 Frame = +3

Query: 6    FRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFTG 185
            ++EL C+A+++H+S + GP+   +F NAL  N DI +  Y   E+RAK L +SF+EGFTG
Sbjct: 839  YKELSCYAEDDHISEWSGPRKETSFANALSMNPDIRVVKYEVCEQRAKKLASSFQEGFTG 898

Query: 186  VCLNKFQKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKAL 365
            VCLNKFQK K S +   G+    +  +LGFAGSGKS+YPQ +L    Y + LVIVPRKAL
Sbjct: 899  VCLNKFQKQKSSFNLVNGSELIDVHLTLGFAGSGKSFYPQCVLKNSSYSNALVIVPRKAL 958

Query: 366  CMDWRNKVHKSIDVATFESVF 428
            C DW NKVH  + V TFES F
Sbjct: 959  CSDWINKVHPDVKVVTFESAF 979


>gb|AFV34758.1| replicase [Grapevine virus B]
          Length = 1709

 Score =  155 bits (391), Expect = 7e-36
 Identities = 75/141 (53%), Positives = 96/141 (68%)
 Frame = +3

Query: 6    FRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFTG 185
            ++EL C+A+++H++ + GP+   +F NAL  N DI I  Y   E+RAK L +SF+EGFTG
Sbjct: 839  YKELSCYAEDDHIAAWTGPRKDTSFSNALSMNPDIRIVKYEVCEQRAKRLASSFQEGFTG 898

Query: 186  VCLNKFQKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKAL 365
            VCLNKFQK K S +   G     +  +LGFAGSGKS+YPQ +L    Y + LVIVPRKAL
Sbjct: 899  VCLNKFQKQKSSFNLVNGKELIDVHLTLGFAGSGKSFYPQCVLKNSSYANALVIVPRKAL 958

Query: 366  CMDWRNKVHKSIDVATFESVF 428
            C DW NKVH  + V TFES F
Sbjct: 959  CSDWTNKVHPDVKVVTFESAF 979


>gb|AET36885.1| putative replicase, partial [Actinidia virus A]
          Length = 1714

 Score =  124 bits (310), Expect = 2e-26
 Identities = 65/141 (46%), Positives = 85/141 (60%)
 Frame = +3

Query: 6    FRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFTG 185
            F+E+   A ++H+  + G K    FE+A+ FN D+S  H+   +++A  L  SF EGFTG
Sbjct: 844  FKEISLFASDDHIEPFPGEKGDCTFESAMDFNPDVSRVHFVVDQEKANHLSESFREGFTG 903

Query: 186  VCLNKFQKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKAL 365
            + LNKF+   G            + T +GFAGSGKSYYPQTLL  G Y  +LVI PRKAL
Sbjct: 904  ISLNKFRG--GVPRTTPQKFSREVHTLMGFAGSGKSYYPQTLLKGGAYKSSLVITPRKAL 961

Query: 366  CMDWRNKVHKSIDVATFESVF 428
              DW +K+ K  DVATFE  F
Sbjct: 962  ASDWESKIAKGADVATFEVAF 982


>ref|YP_004935358.1| ORF1 gene product [Actinidia virus B] gi|356711544|gb|AET36890.1|
            putative replicase [Actinidia virus B]
          Length = 1707

 Score =  119 bits (297), Expect = 6e-25
 Identities = 72/145 (49%), Positives = 82/145 (56%), Gaps = 4/145 (2%)
 Frame = +3

Query: 6    FRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFTG 185
            FREL   A  EH+S Y GP        AL FN D+S      ++ RA  L+ SF EGFTG
Sbjct: 836  FRELKVSATGEHMSAYLGPTATSTLATALDFNPDVSRLSIEVTQSRAIHLLESFREGFTG 895

Query: 186  VCLNKFQKHKGSEDAPVGTGKER----LFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVP 353
            V LNK+QK       P+GT  +     ++   GFAGSGKSYYPQTLL      DTLVIVP
Sbjct: 896  VNLNKYQKR------PLGTDIDNTLIDVYGLFGFAGSGKSYYPQTLLRCCNMKDTLVIVP 949

Query: 354  RKALCMDWRNKVHKSIDVATFESVF 428
            RKAL  DW  KV     V TFES F
Sbjct: 950  RKALKADWSEKVKDGAIVRTFESAF 974


>gb|ADG57799.1| replicase [Grapevine virus B]
          Length = 197

 Score =  102 bits (253), Expect = 7e-20
 Identities = 49/100 (49%), Positives = 66/100 (66%)
 Frame = +3

Query: 6   FRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFTG 185
           ++EL C A+++H+S + GP+   +F NAL  N DI +  Y   E+RAK L  SF+EGFTG
Sbjct: 96  YKELSCFAEDDHISEWTGPRKETSFANALSMNPDIRVVKYEVCEQRAKRLANSFQEGFTG 155

Query: 186 VCLNKFQKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQ 305
           VC NKFQK K S +   G     +  +LGFAGSGKS+YP+
Sbjct: 156 VCPNKFQKQKSSFNLVNGKELIDVHLTLGFAGSGKSFYPE 195


>gb|ABH06996.2| replication-related protein [Grapevine virus A]
          Length = 1707

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 51/142 (35%), Positives = 71/142 (50%)
 Frame = +3

Query: 3    NFRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFT 182
            ++R L     + H+  + G  +   F+ A+L    + + H+   + +A  L  SF  G T
Sbjct: 840  SYRRLHLKITSGHVEPFEGVTSKGGFKEAMLLGDGVGLGHFRVDKAKADRLAQSFYNGNT 899

Query: 183  GVCLNKFQKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKA 362
            GV L K+  +KG   A    G   + TS GFAGSGKS++ QT+L        LVI PRK 
Sbjct: 900  GVLLGKY--NKGKMHASETEGSMEVLTSFGFAGSGKSHWCQTILKHCSVEKVLVISPRKV 957

Query: 363  LCMDWRNKVHKSIDVATFESVF 428
            L  DW  K+ K   V TFE  F
Sbjct: 958  LKDDWVAKISKKHKVVTFEVAF 979


>ref|NP_619662.1| putative replicase [Grapevine virus A]
            gi|81937291|sp|Q67704.1|RDRP_GVAIS RecName: Full=RNA
            replication protein; Includes: RecName: Full=RNA-directed
            RNA polymerase; Includes: RecName: Full=Helicase
            gi|1405615|emb|CAA53182.1| putative replicase [Grapevine
            virus A]
          Length = 1707

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
 Frame = +3

Query: 3    NFRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFT 182
            ++R L     + H+  + G  +   F  A+L    + + H+   + +A  L  SF  G T
Sbjct: 840  SYRRLHLKITSGHVEPFEGVTSKGGFREAMLLGDGVGVGHFRVDKAKADRLAQSFYNGNT 899

Query: 183  GVCLNKFQK---HKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVP 353
            GV L K+ K   H G  + P     + + T+ GFAGSGKS++ QT+L        LVI P
Sbjct: 900  GVLLGKYNKGKMHTGEIEEP-----KEVLTAFGFAGSGKSHWCQTILKHCSVEKVLVISP 954

Query: 354  RKALCMDWRNKVHKSIDVATFESVF 428
            RK L  DW  K+ K   V TFE  F
Sbjct: 955  RKVLRDDWVAKISKKHRVVTFEVAF 979


>gb|ACA52189.1| 194 kDa protein [Grapevine virus A]
          Length = 1707

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 51/142 (35%), Positives = 72/142 (50%)
 Frame = +3

Query: 3    NFRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFT 182
            ++R+L       H+  + G  +   F+ ALL +  I I  +   + +A  L  SF  G T
Sbjct: 840  DYRKLHLKITAGHVEPFEGVNSRGGFKEALLLSDGIGIGRFRVDKSKADRLAQSFHNGNT 899

Query: 183  GVCLNKFQKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKA 362
            GV L K+  +KG   A      + + T+ GFAGSGKS++ QT+L        LVI PRK 
Sbjct: 900  GVLLGKY--NKGKIHAEWLDEPKEVLTAFGFAGSGKSHWCQTILKHCAVEKVLVISPRKV 957

Query: 363  LCMDWRNKVHKSIDVATFESVF 428
            L  DW +K+ K   V TFE  F
Sbjct: 958  LKDDWTSKISKEHKVVTFEVAF 979


>gb|ABH06983.2| 194 kDa protein [Grapevine virus A]
          Length = 1707

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 51/142 (35%), Positives = 72/142 (50%)
 Frame = +3

Query: 3    NFRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFT 182
            ++R+L       H+  + G  +   F+ ALL +  I I  +   + +A  L  SF  G T
Sbjct: 840  DYRKLHLKITAGHVEPFEGVNSRGGFKEALLLSDGIGIGRFRVDKSKADRLAQSFHNGNT 899

Query: 183  GVCLNKFQKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKA 362
            GV L K+  +KG   A      + + T+ GFAGSGKS++ QT+L        LVI PRK 
Sbjct: 900  GVLLGKY--NKGKIHAEWLDEPKEVLTAFGFAGSGKSHWCQTILKHCAVEKVLVISPRKV 957

Query: 363  LCMDWRNKVHKSIDVATFESVF 428
            L  DW +K+ K   V TFE  F
Sbjct: 958  LKDDWTSKISKKHKVVTFEVAF 979


>gb|ABH06988.2| 194 kDa protein [Grapevine virus A]
          Length = 1707

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 51/142 (35%), Positives = 72/142 (50%)
 Frame = +3

Query: 3    NFRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFT 182
            ++R+L       H+  + G  +   F+ ALL +  I I  +   + +A  L  SF  G T
Sbjct: 840  DYRKLHLKITAGHVEPFDGVNSKGGFKEALLLSDGIGIGRFRVDKNKADRLARSFYNGNT 899

Query: 183  GVCLNKFQKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKA 362
            GV L K+  +KG   A      + + T+ GFAGSGKS++ QT+L        LVI PRK 
Sbjct: 900  GVLLGKY--NKGKMHAEWLEEPKEVLTAFGFAGSGKSHWCQTILKHCAVEKVLVISPRKV 957

Query: 363  LCMDWRNKVHKSIDVATFESVF 428
            L  DW +K+ K   V TFE  F
Sbjct: 958  LKDDWTSKISKKHKVVTFEVAF 979


>gb|ABL14358.1| 194 kDa protein [Grapevine virus A]
          Length = 1707

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 51/142 (35%), Positives = 72/142 (50%)
 Frame = +3

Query: 3    NFRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFT 182
            ++R+L       H+  + G  +   F+ ALL +  I I  +   + +A  L  SF  G T
Sbjct: 840  DYRKLHLRITAGHVEPFEGVSSKGGFKEALLLSDGIGIGRFRVDKAKADRLAQSFYNGNT 899

Query: 183  GVCLNKFQKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKA 362
            GV L K+  +KG   A      + + T+ GFAGSGKS++ QT+L        LVI PRK 
Sbjct: 900  GVLLGKY--NKGKMHAEGLEEPKEVLTAFGFAGSGKSHWCQTILKHCTVDKVLVISPRKV 957

Query: 363  LCMDWRNKVHKSIDVATFESVF 428
            L  DW +K+ K   V TFE  F
Sbjct: 958  LKDDWTSKISKKHKVVTFEVAF 979


>gb|AFV73358.1| 195 kDa replicase [Grapevine virus A]
          Length = 1710

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
 Frame = +3

Query: 3    NFRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFT 182
            ++R+L     + H+  + G  +      ALL +  +    +   + +A  L  SF  G T
Sbjct: 843  DYRKLHLRVGDGHVEPFEGVASTGGLREALLLSDGVGQGIFRVDKAKADRLAQSFYSGCT 902

Query: 183  GVCLNKFQK---HKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVP 353
            GV L K+ K   H    + PV      + TS GFAGSGKS++ QT+L +     TL+I P
Sbjct: 903  GVLLGKYNKGKMHSAELEEPV-----EVLTSFGFAGSGKSHWCQTILRSCDVEKTLIISP 957

Query: 354  RKALCMDWRNKVHKSIDVATFESVF 428
            RK L  DW  K+ K   V TFE  F
Sbjct: 958  RKVLKDDWVGKISKKHKVVTFEVAF 982


>gb|ABG37965.1| putative replicase [Grapevine virus A]
          Length = 1710

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
 Frame = +3

Query: 3    NFRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFT 182
            ++R+L     + H+  + G  +    + ALL +  +    +   + +A  L  SF  G T
Sbjct: 843  DYRKLHLRVGDGHVEPFEGVASSGGLKEALLLSDGVGQGIFRVDKAKADRLAQSFYSGCT 902

Query: 183  GVCLNKFQK---HKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVP 353
            GV L K+ K   H    D P       + TS GFAGSGKS++ QT+L +     TL+I P
Sbjct: 903  GVLLGKYNKGKMHAAELDEPT-----EVLTSFGFAGSGKSHWCQTILRSCDVEKTLIISP 957

Query: 354  RKALCMDWRNKVHKSIDVATFESVF 428
            RK L  DW  K+ K   V TFE  F
Sbjct: 958  RKVLKDDWVGKISKKHKVVTFEVAF 982


>gb|ABH07008.1| putative replicase [Grapevine virus A]
          Length = 1710

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 51/142 (35%), Positives = 70/142 (49%)
 Frame = +3

Query: 3    NFRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFT 182
            ++R+L     + H+  + G  +      ALL +  I    +   + +A  L  SF  G T
Sbjct: 843  DYRKLHLRVGDGHVEPFEGVASSGGLREALLLSDGIGQGIFRVDKVKADRLAQSFYSGCT 902

Query: 183  GVCLNKFQKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKA 362
            GV L K+  +KG   A        + TS GFAGSGKS++ QT+L +     TLVI PRK 
Sbjct: 903  GVLLGKY--NKGKMHAAELEEPTEVLTSFGFAGSGKSHWCQTILRSCDVEKTLVISPRKV 960

Query: 363  LCMDWRNKVHKSIDVATFESVF 428
            L  DW  K+ K   V TFE  F
Sbjct: 961  LKDDWAGKISKKHKVVTFEVAF 982


>gb|AGT17853.1| putative replicase [Grapevine virus A]
          Length = 1707

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 49/145 (33%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
 Frame = +3

Query: 3    NFRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFT 182
            ++R L     + H+  + G  +   F  A+L    + +  +   + +A  L  SF  G T
Sbjct: 840  SYRRLHLKITSGHVEPFEGVTSKGGFREAMLLGDGVGLGRFRVDKAKADRLAQSFYNGNT 899

Query: 183  GVCLNKFQK---HKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVP 353
            GV L K+ K   H G  + P     + + T+ GFAGSGKS++ QT+L        LVI P
Sbjct: 900  GVLLGKYNKGKMHTGEIEEP-----KEVLTAFGFAGSGKSHWCQTILKHCSVEKVLVISP 954

Query: 354  RKALCMDWRNKVHKSIDVATFESVF 428
            RK L  DW  K+ K   V TFE  F
Sbjct: 955  RKVLKDDWVAKISKKHKVVTFEVAF 979


>gb|ABH06992.2| 194 kDa protein [Grapevine virus A]
          Length = 1707

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 51/142 (35%), Positives = 71/142 (50%)
 Frame = +3

Query: 3    NFRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFT 182
            ++R+L       H+    G  +   F+ ALL +  I I  +   + +A  L  SF  G T
Sbjct: 840  DYRKLHLKITAGHVEPLDGVNSKGGFKEALLLSDGIGIGRFRSDKSKADRLAQSFYNGNT 899

Query: 183  GVCLNKFQKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKA 362
            GV L K+  +KG   A      + + T+ GFAGSGKS++ QT+L        LVI PRK 
Sbjct: 900  GVLLGKY--NKGKMHAEWLEEPKEVLTAFGFAGSGKSHWCQTILKHCAVEKVLVISPRKV 957

Query: 363  LCMDWRNKVHKSIDVATFESVF 428
            L  DW +K+ K   V TFE  F
Sbjct: 958  LKDDWTSKISKKHKVVTFEVAF 979


>gb|AAO17778.1| RNA-dependent RNA polymerase [Grapevine virus A]
          Length = 1707

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 51/141 (36%), Positives = 70/141 (49%)
 Frame = +3

Query: 6    FRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFTG 185
            +R L       H+  + G  +    + ALL +  + I  +   + +A  L  SF  G TG
Sbjct: 841  YRRLHLKITTGHVEPFDGVISKGGLKEALLLSDGVGIGLFRVDKNKADRLAQSFYNGNTG 900

Query: 186  VCLNKFQKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKAL 365
            V L K+ K K   +  +   KE L T+ GFAGSGKS++ QT+L        LVI PRK L
Sbjct: 901  VLLGKYNKGKMHSEG-IDEPKEVL-TAFGFAGSGKSHWCQTILKHCSVEKALVISPRKVL 958

Query: 366  CMDWRNKVHKSIDVATFESVF 428
              DW +K+ K   V TFE  F
Sbjct: 959  KDDWTSKISKRHKVVTFEVAF 979


>ref|YP_006590065.1| replicase [Grapevine virus F] gi|401620150|gb|AFP95341.1| replicase
            [Grapevine virus F]
          Length = 1727

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 51/140 (36%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
 Frame = +3

Query: 3    NFRELVCHADNEHLSHYHGPKNMVNFENALLFNADISICHYNYSEKRAKLLITSFEEGFT 182
            NF++L      +H+          N  +A   + +     +  + + A+ L  S  EG T
Sbjct: 848  NFKKLCVFMGEDHVERVEETVGRNNAYDAFSLHPNSGRGTFYPNREYAEKLSESMFEGHT 907

Query: 183  GVCLNKFQKHKGSEDAPVGTGKERLFTSL-GFAGSGKSYYPQTLLGTGQYLDTLVIVPRK 359
            G+ LNKF++ K          KE  F S  GFAGSGKSYYPQT+L     +  LVI PRK
Sbjct: 908  GILLNKFKRGKS---VIKDVRKEIKFVSFFGFAGSGKSYYPQTVLQHTFGIRALVISPRK 964

Query: 360  ALCMDWRNKVHKSIDVATFE 419
            AL  DW +K+     V TFE
Sbjct: 965  ALAADWSSKIGSRAKVVTFE 984