BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00031190
         (919 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...   452   e-125
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...   452   e-125
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   450   e-124
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         449   e-124
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     446   e-123
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              443   e-122
emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera]   442   e-121
emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]   440   e-121
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]             439   e-121
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   439   e-121
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati...   436   e-120
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   436   e-120
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-...   436   e-120
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...   435   e-119
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]                  435   e-119
emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]                433   e-119
emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]        433   e-119
emb|CAN64020.1| hypothetical protein VITISV_008811 [Vitis vinifera]   432   e-118
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]        431   e-118
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  430   e-118

>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  452 bits (1163), Expect = e-125
 Identities = 208/305 (68%), Positives = 257/305 (84%)
 Frame = -2

Query: 918  MEEFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEK 739
            ++ F+DVFPD+ P GLPP+RGIEHQIDF P + LPNRPAYR++PEETKE+ RQV+ELL K
Sbjct: 668  LQNFEDVFPDDTPKGLPPLRGIEHQIDFVPGSQLPNRPAYRSNPEETKELQRQVEELLVK 727

Query: 738  KQIRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVF 559
              +RES+SPC+VPV+L+PKK+  W MC+DCRAI+KITVKY   IPRLDDMLD+L G+ +F
Sbjct: 728  GFVRESMSPCSVPVLLVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDQLCGSKIF 787

Query: 558  SKIDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIG 379
            SKIDL SGY Q+R++ GDEWKTAFKTK+ LYEWLVMPF LTNAPSTFMRLMNHV +D  G
Sbjct: 788  SKIDLKSGYHQIRLNPGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVFKDFHG 847

Query: 378  KYVVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSR 199
            K++VVYFDDILI+S  ++EH+ HL+ VF +LR+ +L+ NL KCTFC+D VVFLGF+VSS 
Sbjct: 848  KFIVVYFDDILIFSQNLDEHLEHLKKVFEVLRNQRLFANLKKCTFCVDRVVFLGFVVSSM 907

Query: 198  GMEVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEW 19
            G+EVD  K++AI+EWP P S  +VRSFHGLA FY RFVRDFSTIAAP+TE+ +KD+ F W
Sbjct: 908  GVEVDDEKIKAIKEWPKPNSVTEVRSFHGLASFYRRFVRDFSTIAAPLTEVIKKDKVFTW 967

Query: 18   GKTQE 4
            GK Q+
Sbjct: 968  GKEQD 972


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  452 bits (1163), Expect = e-125
 Identities = 208/305 (68%), Positives = 257/305 (84%)
 Frame = -2

Query: 918  MEEFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEK 739
            ++ F+DVFPD+ P GLPP+RGIEHQIDF P + LPNRPAYR++PEETKE+ RQV+ELL K
Sbjct: 668  LQNFEDVFPDDTPKGLPPLRGIEHQIDFVPGSQLPNRPAYRSNPEETKELQRQVEELLVK 727

Query: 738  KQIRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVF 559
              +RES+SPC+VPV+L+PKK+  W MC+DCRAI+KITVKY   IPRLDDMLD+L G+ +F
Sbjct: 728  GFVRESMSPCSVPVLLVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDQLCGSKIF 787

Query: 558  SKIDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIG 379
            SKIDL SGY Q+R++ GDEWKTAFKTK+ LYEWLVMPF LTNAPSTFMRLMNHV +D  G
Sbjct: 788  SKIDLKSGYHQIRLNPGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVFKDFHG 847

Query: 378  KYVVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSR 199
            K++VVYFDDILI+S  ++EH+ HL+ VF +LR+ +L+ NL KCTFC+D VVFLGF+VSS 
Sbjct: 848  KFIVVYFDDILIFSQNLDEHLEHLKKVFEVLRNQRLFANLKKCTFCVDRVVFLGFVVSSM 907

Query: 198  GMEVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEW 19
            G+EVD  K++AI+EWP P S  +VRSFHGLA FY RFVRDFSTIAAP+TE+ +KD+ F W
Sbjct: 908  GVEVDDEKIKAIKEWPKPNSVTEVRSFHGLASFYRRFVRDFSTIAAPLTEVIKKDKVFTW 967

Query: 18   GKTQE 4
            GK Q+
Sbjct: 968  GKEQD 972


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  450 bits (1158), Expect = e-124
 Identities = 215/305 (70%), Positives = 251/305 (82%)
 Frame = -2

Query: 918  MEEFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEK 739
            + EF DVFP+E+P GLPPIRGIEHQID  P A LPNRPAYRT+P+E KEI RQV ELL+ 
Sbjct: 628  LSEFADVFPEELPKGLPPIRGIEHQIDLIPGASLPNRPAYRTNPDEAKEIQRQVDELLQA 687

Query: 738  KQIRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVF 559
              I+ESLSPCAVPV+L+PKK+  W MC+DCRAI+ ITVKY + IPRLDDMLDEL GA +F
Sbjct: 688  GFIQESLSPCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRYPIPRLDDMLDELHGAKIF 747

Query: 558  SKIDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIG 379
            SKIDL  GY Q+RM +GDEWKTAFKTK+ LYEWLVMPF LTNAPSTFMRLMNHVLR+ IG
Sbjct: 748  SKIDLRRGYHQIRMQKGDEWKTAFKTKNGLYEWLVMPFGLTNAPSTFMRLMNHVLRNFIG 807

Query: 378  KYVVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSR 199
            K+VVVYFDDILIYS    +H+ HL+ VF++LR  +LY NL KC F ++ VVFLGFIVSS+
Sbjct: 808  KFVVVYFDDILIYSKDPQKHIIHLKEVFLVLRREQLYANLEKCYFGVESVVFLGFIVSSK 867

Query: 198  GMEVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEW 19
            G+EVD TK++AI +WPTPK+   VRSFHGLA FY RFV+DFSTIAAP+ EL +KD  FEW
Sbjct: 868  GIEVDETKIQAIRDWPTPKTATKVRSFHGLASFYRRFVKDFSTIAAPLNELVKKDVKFEW 927

Query: 18   GKTQE 4
            G  QE
Sbjct: 928  GPKQE 932


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  449 bits (1154), Expect = e-124
 Identities = 216/306 (70%), Positives = 249/306 (81%)
 Frame = -2

Query: 918  MEEFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEK 739
            ++E+ DVFP EIP GLPPIRGIEHQID  P A LPNR  YRT+PEETKEI RQV+ELL+K
Sbjct: 688  LQEYSDVFPSEIPEGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDK 747

Query: 738  KQIRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVF 559
              +RESLSPCAVPVIL+PKK+  W MC+DCRAI+ IT++Y   IPRLDDMLDELSGA VF
Sbjct: 748  GYVRESLSPCAVPVILVPKKDGTWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGAIVF 807

Query: 558  SKIDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIG 379
            SK+DL SGY Q+RM  GDEWKTAFKTK  LYEWLVMPF LTNAPSTFMRLMN VLR  IG
Sbjct: 808  SKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIG 867

Query: 378  KYVVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSR 199
            K+VVVYFDDILIYS  ++EHV H+R VF  LRDA+L+ NL KCTFC D V FLG++V+ +
Sbjct: 868  KFVVVYFDDILIYSKSMDEHVDHMRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 927

Query: 198  GMEVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEW 19
            G+EVD+ KV AI  WP PK+   VRSF GLAGFY RFV+DFSTIAAP+ EL++K  +F W
Sbjct: 928  GIEVDQAKVEAIHGWPMPKTITQVRSFLGLAGFYRRFVKDFSTIAAPLNELTKKGVHFSW 987

Query: 18   GKTQEH 1
            GK QEH
Sbjct: 988  GKVQEH 993


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  446 bits (1147), Expect = e-123
 Identities = 211/305 (69%), Positives = 252/305 (82%)
 Frame = -2

Query: 918  MEEFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEK 739
            ++E++DVFP+E P GLPP+RGIEHQID  P A LPNRPAYRT+PEETKEI RQV+ LL+K
Sbjct: 688  LQEYEDVFPEETPVGLPPLRGIEHQIDLIPGATLPNRPAYRTNPEETKEIQRQVQALLDK 747

Query: 738  KQIRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVF 559
              +RESLSPCAVPVIL+PKK+  W MC+DCRAI+ ITV+Y   IPRLDDMLDELSG+ +F
Sbjct: 748  GYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITVRYRHPIPRLDDMLDELSGSMIF 807

Query: 558  SKIDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIG 379
            SKIDL SG+ Q+RM  GDEWKTAFKTK  LYEWLVMPF LTNAPSTFMRLMNHVLR  IG
Sbjct: 808  SKIDLRSGFHQIRMKIGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIG 867

Query: 378  KYVVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSR 199
            K+VVVYFDDILIYS  + EHV H++ V  +LR  +LY NL KCTFC D+VVFLGF+VS  
Sbjct: 868  KFVVVYFDDILIYSKTLEEHVAHIQQVLDVLRKEQLYANLEKCTFCTDQVVFLGFVVSGL 927

Query: 198  GMEVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEW 19
            G++VD +KV+AI++WPTP++   V+SF GLAGFY RFVR FSTIAAP+ EL++K   F+W
Sbjct: 928  GIQVDESKVKAIKDWPTPENVSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQW 987

Query: 18   GKTQE 4
            G+ QE
Sbjct: 988  GEPQE 992


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  443 bits (1140), Expect = e-122
 Identities = 208/305 (68%), Positives = 252/305 (82%)
 Frame = -2

Query: 918  MEEFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEK 739
            ++++ DVFP+E P GLPPIRGIEHQIDF P A LPNRPAYRT+P ETKE+++QV EL+E+
Sbjct: 877  LQDYTDVFPEENPVGLPPIRGIEHQIDFVPGASLPNRPAYRTNPVETKELEKQVTELMER 936

Query: 738  KQIRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVF 559
              IRES+SPCAVPV+L+PKK+  W MC+DCRAI+ ITVKY   IPRLDDMLDEL G+S+F
Sbjct: 937  GHIRESMSPCAVPVLLVPKKDGSWRMCVDCRAINNITVKYRHPIPRLDDMLDELHGSSIF 996

Query: 558  SKIDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIG 379
            SK+DL SGY Q+RM EGDEWKTAFKT   LYEWLVMPF LTNAPSTFMRLMNHVLR  IG
Sbjct: 997  SKVDLKSGYHQIRMKEGDEWKTAFKTIQGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIG 1056

Query: 378  KYVVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSR 199
            ++V+VYFDDIL+YS  + EHV HL+ V  +LR  KLY NL KCTF  D +VFLGF+VS+ 
Sbjct: 1057 RFVIVYFDDILVYSKSLEEHVEHLKMVLEVLRKEKLYANLKKCTFGTDNLVFLGFVVSTD 1116

Query: 198  GMEVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEW 19
            G++VD  KV+AI EWP+PKS  +VRSFHGLAGFY RFV+DFST+AAP+TE+ +K+  F+W
Sbjct: 1117 GVKVDEEKVKAIREWPSPKSVGEVRSFHGLAGFYRRFVKDFSTLAAPLTEVIKKNVGFKW 1176

Query: 18   GKTQE 4
             + QE
Sbjct: 1177 EQAQE 1181


>emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera]
          Length = 771

 Score =  442 bits (1136), Expect = e-121
 Identities = 205/304 (67%), Positives = 249/304 (81%)
 Frame = -2

Query: 915 EEFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEKK 736
           +E++DVFP+++PSGLPPIRGIEHQIDF P A +PNRPAYR +PEETKE+ RQV+ELL K 
Sbjct: 73  KEYEDVFPNDVPSGLPPIRGIEHQIDFVPGATIPNRPAYRGNPEETKELQRQVEELLTKG 132

Query: 735 QIRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVFS 556
            +RESLSPC V V+L+P K+  W MC+DCRAI+ I VKY   IPRLDDMLDEL G+ VF+
Sbjct: 133 HVRESLSPCVVLVLLVPNKDGTWRMCVDCRAINNIMVKYRHPIPRLDDMLDELHGSCVFT 192

Query: 555 KIDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIGK 376
           KIDL SGY Q+RM EGDEWKT FKTK+ LYEWLVMPF LTNAPSTFMRLMNH LR  IG+
Sbjct: 193 KIDLKSGYHQIRMKEGDEWKTTFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHALRSFIGR 252

Query: 375 YVVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSRG 196
           +VVVYFDDIL+YS  ++EH+ HL  V  +LR  KLY NL KC+FCMD+VVFLG++VS++G
Sbjct: 253 FVVVYFDDILVYSKNLDEHINHLHCVLDVLRKXKLYANLKKCSFCMDKVVFLGYVVSAKG 312

Query: 195 MEVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEWG 16
           +EVD  KV+AI+EWPTPK   +VRSFHGLA FY RFV+DFS +AAP+TE+ +K   F+WG
Sbjct: 313 IEVDEEKVKAIKEWPTPKLITEVRSFHGLASFYRRFVKDFSILAAPLTEIVKKSVGFKWG 372

Query: 15  KTQE 4
             Q+
Sbjct: 373 SEQD 376


>emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]
          Length = 960

 Score =  440 bits (1132), Expect = e-121
 Identities = 205/305 (67%), Positives = 253/305 (82%)
 Frame = -2

Query: 918  MEEFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEK 739
            ++E++DVFP+++PSGLPPIRGIEHQIDF P A +PNR AYR++ EETKE+ RQV+ELL K
Sbjct: 165  VKEYEDVFPNDVPSGLPPIRGIEHQIDFVPGATIPNRLAYRSNLEETKELQRQVEELLTK 224

Query: 738  KQIRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVF 559
              +RES+ PCA+ V+L+PKK+  W MC+DCRAI+ ITVKY   IPRLDDMLDEL G+ VF
Sbjct: 225  GHVRESMRPCAILVLLVPKKDGTWRMCVDCRAINNITVKYRHPIPRLDDMLDELHGSCVF 284

Query: 558  SKIDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIG 379
             KIDL SGY Q+RM EGDEWKTAFKTK+ LYEWLVMPF LTNA STFMRLMNHVLR  IG
Sbjct: 285  IKIDLKSGYHQIRMKEGDEWKTAFKTKYGLYEWLVMPFGLTNALSTFMRLMNHVLRAFIG 344

Query: 378  KYVVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSR 199
            ++VVVYFDDIL+YS  ++EH+ HL  V  +LR  KLY NL KC+FCMD+VVFLG++VS++
Sbjct: 345  RFVVVYFDDILVYSKNLDEHINHLHCVLAILRKEKLYANLKKCSFCMDKVVFLGYVVSAK 404

Query: 198  GMEVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEW 19
            G+EVD  K++AI+EWPTPKS  +VRSFHGLA FY RFV+DFST+AAP+TE+ +K   F+W
Sbjct: 405  GIEVDEEKLKAIKEWPTPKSITEVRSFHGLASFYFRFVKDFSTLAAPLTEIVKKSVGFKW 464

Query: 18   GKTQE 4
            G  Q+
Sbjct: 465  GSEQD 469


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score =  439 bits (1130), Expect = e-121
 Identities = 205/305 (67%), Positives = 247/305 (80%)
 Frame = -2

Query: 918  MEEFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEK 739
            ++EFK++FP+E+PSGLPPIRGIEH ID  P A LPNRPAYR++P++T+EI RQV EL+ K
Sbjct: 575  LQEFKELFPEEVPSGLPPIRGIEHHIDLNPGASLPNRPAYRSNPQQTQEIQRQVAELISK 634

Query: 738  KQIRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVF 559
              +RESLSPCAVP+IL+PKK+  W MC DCRAI  IT+KY   IPRLDD+LDEL GA +F
Sbjct: 635  GWVRESLSPCAVPIILVPKKDGSWRMCTDCRAISNITIKYRHPIPRLDDLLDELFGACLF 694

Query: 558  SKIDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIG 379
            SKIDL SGY Q+R+ EGDEWKTAFKTK  LYEW+VMPF LTNAPSTFMRLMNHVLR+ +G
Sbjct: 695  SKIDLKSGYHQIRIREGDEWKTAFKTKFGLYEWMVMPFGLTNAPSTFMRLMNHVLREFLG 754

Query: 378  KYVVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSR 199
            K+VVVYFDDILIYS  +++H  HL+ V  +LR   LY NL KC FC D V+FLGFIVSS+
Sbjct: 755  KFVVVYFDDILIYSKNLDDHCIHLKAVLQVLRYENLYANLEKCVFCTDHVIFLGFIVSSK 814

Query: 198  GMEVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEW 19
            G+ VD  KV+AI EWP PK+  +VRSFHGLA FY RFV+DFST+AAP+ E+  KD  F+W
Sbjct: 815  GVHVDEEKVKAIREWPPPKNVSEVRSFHGLASFYRRFVKDFSTLAAPLNEIVEKDVGFKW 874

Query: 18   GKTQE 4
            G+ QE
Sbjct: 875  GEKQE 879


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  439 bits (1129), Expect = e-121
 Identities = 211/306 (68%), Positives = 246/306 (80%)
 Frame = -2

Query: 918  MEEFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEK 739
            ++E+ DVFP E+P GLPP+RGIEHQID  P A LPNR  YRT+PEETKEI RQV ELL+K
Sbjct: 685  LQEYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDK 744

Query: 738  KQIRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVF 559
              +RESLSPCAVPVIL+PKK+  W MC+DCRAI+ IT++Y   IPRLDDMLDELSG+ VF
Sbjct: 745  GYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVF 804

Query: 558  SKIDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIG 379
            SK+DL SGY Q+RM  GDEWKTAFKTK  LYEWLVMPF LTNAPSTFMRLMN VLR  IG
Sbjct: 805  SKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIG 864

Query: 378  KYVVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSR 199
            K+VVVYFDDILIYS  + EH  HLR VF  LRDA+L+ NL KCTFC D V FLG++V+ +
Sbjct: 865  KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 924

Query: 198  GMEVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEW 19
            G+EVD+ KV AI+ WPTPK+   VRSF GLAGFY RFV+DFSTIAAP+  L++K   F W
Sbjct: 925  GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNVLTKKGVPFTW 984

Query: 18   GKTQEH 1
            G +QE+
Sbjct: 985  GTSQEN 990



 Score =  158 bits (400), Expect = 2e-36
 Identities = 75/151 (49%), Positives = 102/151 (67%)
 Frame = -2

Query: 471  LYEWLVMPFSLTNAPSTFMRLMNHVLRDVIGKYVVVYFDDILIYSTCVNEHVRHLRHVFV 292
            LYE+ VM F LTNAP+ FM LMN V  + + K+VVV+ DDIL+YS    +H  HLR V  
Sbjct: 1626 LYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILVYSQSEEDHQHHLRLVLG 1685

Query: 291  LLRDAKLYVNLSKCTFCMDEVVFLGFIVSSRGMEVDRTKVRAIEEWPTPKS*VDVRSFHG 112
             LR+ +LY  LSKC F + EV FLG ++S++G+ VD   V A+ +W  PK+   +RSF G
Sbjct: 1686 KLREHQLYAKLSKCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWKQPKTVTQIRSFLG 1745

Query: 111  LAGFYHRFVRDFSTIAAPVTELSRKDRNFEW 19
            LAG+Y RF+ +FS IA P+T+L +K+  F W
Sbjct: 1746 LAGYYRRFIENFSKIARPMTQLLKKEEKFVW 1776


>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
          Length = 1739

 Score =  436 bits (1122), Expect = e-120
 Identities = 210/304 (69%), Positives = 243/304 (79%)
 Frame = -2

Query: 912  EFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEKKQ 733
            E+ DVFP E+P GLPP+RGIEHQID  P A LPNR  YRT+PEETKEI RQV ELL+K  
Sbjct: 1020 EYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGY 1079

Query: 732  IRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVFSK 553
            +RESLSPCAVPVIL+PKK+  W MC+DCRAI+ IT++Y   IPRLDDMLDELSG+ VFSK
Sbjct: 1080 VRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSK 1139

Query: 552  IDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIGKY 373
            +DL SGY Q+RM  GDEWKT FKTK  LYEWLVMPF LTNAPSTFMRLMN VLR  IGK+
Sbjct: 1140 VDLRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKF 1199

Query: 372  VVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSRGM 193
            VVVYFDDILIYS  + EH  HLR VF  LRDA+L+ NL KCTFC D V FLG++V+ +G+
Sbjct: 1200 VVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGI 1259

Query: 192  EVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEWGK 13
            EVD+ KV AI+ WPTPK+   VRSF GLAGFY RFV+DFSTIAAP+  L++K   F WG 
Sbjct: 1260 EVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGT 1319

Query: 12   TQEH 1
            +QE+
Sbjct: 1320 SQEN 1323


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  436 bits (1122), Expect = e-120
 Identities = 208/305 (68%), Positives = 246/305 (80%)
 Frame = -2

Query: 918  MEEFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEK 739
            ++EF DVFP ++P GLPPIRGIEHQID  P A LPNR  YRT+PEETKEI RQV+ELL+K
Sbjct: 729  LQEFTDVFPQDVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIMRQVQELLDK 788

Query: 738  KQIRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVF 559
              IRESLSPCAVP+IL+PKK+    MC+DCR I+ IT++Y   IPRLDDMLDELSG+++F
Sbjct: 789  GYIRESLSPCAVPIILVPKKDGTSRMCVDCRGINNITIRYRHPIPRLDDMLDELSGSTIF 848

Query: 558  SKIDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIG 379
            SK+DL SGY Q+RM  GDEWKT FKTK  LYEWLVMPF LTNAPSTFMRLMN VLR  IG
Sbjct: 849  SKVDLRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIG 908

Query: 378  KYVVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSR 199
            ++VVVYFDDILIYS  + EH+ HLR VF+ LRDA+L+ NL KCTFC D V FLG++V+ +
Sbjct: 909  RFVVVYFDDILIYSKSLEEHLEHLRAVFIALRDARLFGNLGKCTFCTDRVSFLGYVVTPQ 968

Query: 198  GMEVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEW 19
            G+EVD+ K+ AIE WP PK+   VRSF GLAGFY RFVRDFSTIAAP+ E+++KD  F W
Sbjct: 969  GIEVDKAKIEAIESWPHPKTVTQVRSFLGLAGFYRRFVRDFSTIAAPLNEVTKKDVPFVW 1028

Query: 18   GKTQE 4
            G  QE
Sbjct: 1029 GTAQE 1033


>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|108864301|gb|ABA93040.2|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1748

 Score =  436 bits (1122), Expect = e-120
 Identities = 210/304 (69%), Positives = 243/304 (79%)
 Frame = -2

Query: 912  EFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEKKQ 733
            E+ DVFP E+P GLPP+RGIEHQID  P A LPNR  YRT+PEETKEI RQV ELL+K  
Sbjct: 1029 EYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGY 1088

Query: 732  IRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVFSK 553
            +RESLSPCAVPVIL+PKK+  W MC+DCRAI+ IT++Y   IPRLDDMLDELSG+ VFSK
Sbjct: 1089 VRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSK 1148

Query: 552  IDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIGKY 373
            +DL SGY Q+RM  GDEWKT FKTK  LYEWLVMPF LTNAPSTFMRLMN VLR  IGK+
Sbjct: 1149 VDLRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKF 1208

Query: 372  VVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSRGM 193
            VVVYFDDILIYS  + EH  HLR VF  LRDA+L+ NL KCTFC D V FLG++V+ +G+
Sbjct: 1209 VVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGI 1268

Query: 192  EVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEWGK 13
            EVD+ KV AI+ WPTPK+   VRSF GLAGFY RFV+DFSTIAAP+  L++K   F WG 
Sbjct: 1269 EVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGT 1328

Query: 12   TQEH 1
            +QE+
Sbjct: 1329 SQEN 1332


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  435 bits (1118), Expect = e-119
 Identities = 209/306 (68%), Positives = 245/306 (80%)
 Frame = -2

Query: 918  MEEFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEK 739
            ++E+ DVFP E+P GLPP+RGIEHQID  P A LPNR  YRT+PEETKEI RQV ELL+K
Sbjct: 664  LQEYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDK 723

Query: 738  KQIRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVF 559
              +RESLSPCAVPVIL+PKK+  W MC+DCRAI+ IT++Y   IPRLDDMLDELSG+ VF
Sbjct: 724  GYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVF 783

Query: 558  SKIDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIG 379
            SK++L SGY Q+ M  GDEWKTAFKTK  LYEWLVMPF LTNAPSTFMRLMN VLR  IG
Sbjct: 784  SKVELRSGYHQIHMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIG 843

Query: 378  KYVVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSR 199
            K+VVVYFDDILIYS  + EH  HLR VF  LRDA+L+ NL KCTFC D V FLG++V+ +
Sbjct: 844  KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQ 903

Query: 198  GMEVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEW 19
            G+EVD+ KV AI+ WPTPK+   VRSF GLAGFY RFV+DFSTIAAP+  L++K   F W
Sbjct: 904  GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYCRFVQDFSTIAAPLNALTKKGVPFTW 963

Query: 18   GKTQEH 1
            G +QE+
Sbjct: 964  GTSQEN 969


>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1717

 Score =  435 bits (1118), Expect = e-119
 Identities = 208/305 (68%), Positives = 245/305 (80%)
 Frame = -2

Query: 918  MEEFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEK 739
            ++EF DVFP ++P GLPPIRGIEHQID  P A LPNR  YRT+PEETKEI RQV+ELL+K
Sbjct: 741  LQEFADVFPQDVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIMRQVQELLDK 800

Query: 738  KQIRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVF 559
              IRESLSPCAVP+IL+PKK+    MC+DCR I+ IT++Y   IPRLDDMLDELSG+ +F
Sbjct: 801  GYIRESLSPCAVPIILVPKKDGTSRMCVDCRGINNITIRYRHPIPRLDDMLDELSGSIIF 860

Query: 558  SKIDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIG 379
            SK+DL SGY Q+RM  GDEWKTAFKTK  LYEWLVMPF LTNAPSTFMRLMN VLR  IG
Sbjct: 861  SKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIG 920

Query: 378  KYVVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSR 199
            ++VVVYFDDILIYS  + +H+ HLR VF  LRDA+L+ NL KCTFC D V FLG++V+ +
Sbjct: 921  RFVVVYFDDILIYSRSLEDHLDHLRAVFTALRDARLFGNLGKCTFCTDRVSFLGYVVTPQ 980

Query: 198  GMEVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEW 19
            G+EVD+ K+ AIE WP PK+   VRSF GLAGFY RFVRDFSTIAAP+ EL++KD  + W
Sbjct: 981  GIEVDKAKIEAIESWPQPKTVTQVRSFLGLAGFYRRFVRDFSTIAAPLNELTKKDVPYSW 1040

Query: 18   GKTQE 4
            G  QE
Sbjct: 1041 GTAQE 1045


>emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]
          Length = 1667

 Score =  433 bits (1114), Expect = e-119
 Identities = 209/304 (68%), Positives = 244/304 (80%)
 Frame = -2

Query: 912  EFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEKKQ 733
            E+ DVFP E+P GLPP+RGIEHQID  P A LPNR  YRT+PEETKEI RQV ELL+K  
Sbjct: 610  EYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGY 669

Query: 732  IRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVFSK 553
            +RESLSPCAV VIL+PKK+  W MC+DCRAI+ IT++Y   IPRLDDMLDELSG+ VFSK
Sbjct: 670  VRESLSPCAVLVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSK 729

Query: 552  IDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIGKY 373
            +DL SGY Q+RM+ GDEWKTAFKTK  LYEWLVMPF LTNAP+TFMRLMN VLR  IGK+
Sbjct: 730  VDLRSGYHQIRMNLGDEWKTAFKTKFGLYEWLVMPFGLTNAPTTFMRLMNEVLRPFIGKF 789

Query: 372  VVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSRGM 193
            VVVYFDDILIYS  + EH  HLR VF  LRDA+L+ NL KCTFC D V FLG++V+ +G+
Sbjct: 790  VVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGI 849

Query: 192  EVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEWGK 13
            EVD+ KV AI+ WPTPK+   VRSF GLAGFY RFV+DFSTIAAP+  L++K   F WG 
Sbjct: 850  EVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGT 909

Query: 12   TQEH 1
            +QE+
Sbjct: 910  SQEN 913


>emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]
          Length = 1667

 Score =  433 bits (1114), Expect = e-119
 Identities = 209/304 (68%), Positives = 244/304 (80%)
 Frame = -2

Query: 912  EFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEKKQ 733
            E+ DVFP E+P GLPP+RGIEHQID  P A LPNR  YRT+PEETKEI RQV ELL+K  
Sbjct: 610  EYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGY 669

Query: 732  IRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVFSK 553
            +RESLSPCAV VIL+PKK+  W MC+DCRAI+ IT++Y   IPRLDDMLDELSG+ VFSK
Sbjct: 670  VRESLSPCAVLVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSK 729

Query: 552  IDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIGKY 373
            +DL SGY Q+RM+ GDEWKTAFKTK  LYEWLVMPF LTNAP+TFMRLMN VLR  IGK+
Sbjct: 730  VDLRSGYHQIRMNLGDEWKTAFKTKFGLYEWLVMPFGLTNAPTTFMRLMNEVLRPFIGKF 789

Query: 372  VVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSRGM 193
            VVVYFDDILIYS  + EH  HLR VF  LRDA+L+ NL KCTFC D V FLG++V+ +G+
Sbjct: 790  VVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGI 849

Query: 192  EVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEWGK 13
            EVD+ KV AI+ WPTPK+   VRSF GLAGFY RFV+DFSTIAAP+  L++K   F WG 
Sbjct: 850  EVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGT 909

Query: 12   TQEH 1
            +QE+
Sbjct: 910  SQEN 913


>emb|CAN64020.1| hypothetical protein VITISV_008811 [Vitis vinifera]
          Length = 1089

 Score =  432 bits (1110), Expect = e-118
 Identities = 203/304 (66%), Positives = 245/304 (80%)
 Frame = -2

Query: 915  EEFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEKK 736
            +E++DVFP+++ SGLPPIRGIEHQIDF P A  PNRPAYR++P+ETKE+ RQV+ELL K 
Sbjct: 412  KEYEDVFPNDVLSGLPPIRGIEHQIDFVPSATFPNRPAYRSNPKETKELQRQVEELLTKG 471

Query: 735  QIRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVFS 556
             +RESLSPCAVPV L+PKK+  W MC+DCR I+ ITV Y   IPRLDDMLDEL G+ V  
Sbjct: 472  HVRESLSPCAVPVWLVPKKDETWRMCVDCRVINNITVNYRHLIPRLDDMLDELHGSCVLI 531

Query: 555  KIDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIGK 376
            KIDL SGY Q+RM EGDEWKTAFKTK+ LYE LVMPF LTNAPSTFMRLMNH LR  IG+
Sbjct: 532  KIDLKSGYHQIRMKEGDEWKTAFKTKYGLYEXLVMPFGLTNAPSTFMRLMNHALRAFIGR 591

Query: 375  YVVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSRG 196
            +VVVYF DIL+YS  ++EH+ HL  V  +LR  KLY NL KC+FCMD+VVFLG++VS +G
Sbjct: 592  FVVVYFYDILVYSKNLBEHIXHLHCVLTVLRKEKLYANLKKCSFCMDKVVFLGYVVSXKG 651

Query: 195  MEVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEWG 16
            +EVD  KV+AI+EWPTPKS  +VRSFHGL  FY RFV+DFST+A P+TE+ +K   F+WG
Sbjct: 652  IEVDEEKVKAIKEWPTPKSIXEVRSFHGLXSFYRRFVKDFSTLAIPLTEIVKKSVGFKWG 711

Query: 15   KTQE 4
              Q+
Sbjct: 712  SEQD 715


>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
          Length = 2241

 Score =  431 bits (1109), Expect = e-118
 Identities = 208/306 (67%), Positives = 243/306 (79%)
 Frame = -2

Query: 918  MEEFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEK 739
            ++E+ DVFP E+P GLP +RGIEHQID  P A LPNR  YRT+PEETKEI RQV ELL+K
Sbjct: 779  LQEYSDVFPKEVPPGLPLVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDK 838

Query: 738  KQIRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVF 559
              +RESLSPCAVPVIL+PKK+  W MC+DCRAI+  T++Y   IPRLDDMLDELSG+ VF
Sbjct: 839  GYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNNTIRYRHPIPRLDDMLDELSGSIVF 898

Query: 558  SKIDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIG 379
            SK+DL SGY Q+RM  GDEWKT FKTK  LYEWLVMPF LTNAPSTFMRLMN VLR  IG
Sbjct: 899  SKVDLRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIG 958

Query: 378  KYVVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSR 199
            K+VVVYFDDILIYS  + EH  HLR VF  LRDA+L+ NL KCTFC D V FLG++V+ +
Sbjct: 959  KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLKKCTFCTDRVSFLGYVVTPQ 1018

Query: 198  GMEVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEW 19
            G+EVD+ KV AI+ WPTPK+   VRSF GLAGFY RFV+DFSTIAAP+  L++K   F W
Sbjct: 1019 GIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTW 1078

Query: 18   GKTQEH 1
            G +QE+
Sbjct: 1079 GTSQEN 1084



 Score =  117 bits (294), Expect = 5e-24
 Identities = 62/163 (38%), Positives = 91/163 (55%)
 Frame = -2

Query: 507  DEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIGKYVVVYFDDILIYSTCV 328
            D+ KT F   +  Y +  M F L NAP++F R M  +  D+I   + ++ DD  +Y    
Sbjct: 2013 DQSKTTFTCPYGTYAYRRMSFGLCNAPASFQRCMMSIFSDMIEDIMEIFMDDFSVYGKTF 2072

Query: 327  NEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSRGMEVDRTKVRAIEEWPT 148
               +++L  V    ++  L +N  KC F + E + LG  VS RG+E DR K+  I++ P 
Sbjct: 2073 GHCLQNLDKVLQRCQEKDLVLNWEKCHFMVREGIVLGHRVSERGIEFDRAKIDVIDQLPP 2132

Query: 147  PKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEW 19
            P +   +RSF G A FY RF++DFSTIA P+T L  KD  FE+
Sbjct: 2133 PVNIKGIRSFLGHADFYRRFIKDFSTIARPLTNLLAKDTPFEF 2175


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  430 bits (1105), Expect = e-118
 Identities = 206/305 (67%), Positives = 243/305 (79%)
 Frame = -2

Query: 918  MEEFKDVFPDEIPSGLPPIRGIEHQIDFQPRAVLPNRPAYRTSPEETKEIDRQVKELLEK 739
            ++EF DVFP ++P GLPPIRGIEHQID  P A LPNR  YRT+PEETKEI RQV+ELL+K
Sbjct: 744  LQEFADVFPQDVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIMRQVQELLDK 803

Query: 738  KQIRESLSPCAVPVILIPKKNNEWCMCMDCRAIHKITVKYLFHIPRLDDMLDELSGASVF 559
              IRESLSPCAVP+IL+PKK+    MC+DCR I+ IT++    IPRLDDMLDELSG+ +F
Sbjct: 804  GYIRESLSPCAVPIILVPKKDGTSRMCVDCRGINNITIRXRHPIPRLDDMLDELSGSIIF 863

Query: 558  SKIDLHSGYFQVRMSEGDEWKTAFKTKHELYEWLVMPFSLTNAPSTFMRLMNHVLRDVIG 379
            SK+DL SGY Q+RM  GDEWKTAFKTK  LYEWLVMPF LTNAPSTFMRLMN VLR  IG
Sbjct: 864  SKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIG 923

Query: 378  KYVVVYFDDILIYSTCVNEHVRHLRHVFVLLRDAKLYVNLSKCTFCMDEVVFLGFIVSSR 199
            ++VVVYFDDILIYS  + +H+ HLR VF  LRDA+L+ NL KCTFC D V FLG++V+ +
Sbjct: 924  RFVVVYFDDILIYSRSLEDHLDHLRAVFTALRDARLFGNLGKCTFCTDRVSFLGYVVTPQ 983

Query: 198  GMEVDRTKVRAIEEWPTPKS*VDVRSFHGLAGFYHRFVRDFSTIAAPVTELSRKDRNFEW 19
            G+EVD+ K+ AIE WP PK+   VRSF G AGFY RFVRDFSTIAAP+ EL++KD  + W
Sbjct: 984  GIEVDKAKIEAIESWPQPKTVTQVRSFLGXAGFYRRFVRDFSTIAAPLNELTKKDVPYSW 1043

Query: 18   GKTQE 4
            G  QE
Sbjct: 1044 GTAQE 1048