BLASTX nr result

ID: Mentha25_contig00029890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00029890
         (448 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD09591.1| unknown [Trifolium repens]                              60   2e-07
gb|ABD32664.1| Homeodomain-like [Medicago truncatula]                  57   3e-06
gb|ABD28490.1| Homeodomain-like [Medicago truncatula]                  57   3e-06
ref|XP_003629021.1| Ribosomal protein-like protein [Medicago tru...    57   3e-06
gb|ABW81022.1| unknown [Arabidopsis lyrata subsp. lyrata]              56   4e-06

>gb|ADD09591.1| unknown [Trifolium repens]
          Length = 351

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
 Frame = +2

Query: 11  TPENEPSP---QNTSKKTSNAPKG*TNQQDVTLMFAYCFVSTNAIVGTNQKDAVLWKKVH 181
           T  NE +P   ++T K   N       +Q++ L+  +    TN+IVG NQK    W K+ 
Sbjct: 118 TAANEDTPNSEESTLKSRKNQQPAWNTEQNLVLISGWIKFGTNSIVGKNQKGETYWGKIA 177

Query: 182 DLYNQTPGITDPRSVDSLRQRYRRLNKNVTAWVGAYQKA 298
           +  N+      PR   + R R+  +NK +  WVG Y KA
Sbjct: 178 EYCNEHCSFDPPRDQHACRNRFNYMNKIIGKWVGVYDKA 216


>gb|ABD32664.1| Homeodomain-like [Medicago truncatula]
          Length = 369

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/94 (27%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
 Frame = +2

Query: 20  NEPSPQNTSKKTSNAPKG*TN-QQDVTLMFAYCFVSTNAIVGTNQKDAVLWKKVHDLYNQ 196
           +E +P++++ K+  + +   N QQ++ L+ A+    T+++VG NQ+    W K+ +  N+
Sbjct: 110 DEVTPEDSTPKSKRSKEPAWNTQQNLVLISAWIKYGTSSVVGRNQRGETYWGKIAEYCNE 169

Query: 197 TPGITDPRSVDSLRQRYRRLNKNVTAWVGAYQKA 298
                 PR + + R R+  ++K +  W+GAY+ A
Sbjct: 170 YCSFDSPRDLVACRNRFNYMSKIINKWIGAYESA 203


>gb|ABD28490.1| Homeodomain-like [Medicago truncatula]
          Length = 305

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/94 (27%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
 Frame = +2

Query: 20  NEPSPQNTSKKTSNAPKG*TN-QQDVTLMFAYCFVSTNAIVGTNQKDAVLWKKVHDLYNQ 196
           +E +P++++ K+  + +   N QQ++ L+ A+    T+++VG NQ+    W K+ +  N+
Sbjct: 114 DEVTPEDSTPKSKRSKEPAWNIQQNLVLISAWIKYGTSSVVGRNQRGETYWGKIAEYCNE 173

Query: 197 TPGITDPRSVDSLRQRYRRLNKNVTAWVGAYQKA 298
                 PR + + R R+  ++K +  W+GAY+ A
Sbjct: 174 YCSFDSPRDLVACRNRFNYMSKIINKWIGAYESA 207


>ref|XP_003629021.1| Ribosomal protein-like protein [Medicago truncatula]
           gi|355523043|gb|AET03497.1| Ribosomal protein-like
           protein [Medicago truncatula]
          Length = 692

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
 Frame = +2

Query: 17  ENEPSPQNTSKKTSNAPK-G*TNQQDVTLMFAYCFVSTNAIVGTNQKDAVLWKKVHDLYN 193
           E  P P++T+ K    P+ G   +Q++ L+  +    T ++VG NQ     W K+ +  N
Sbjct: 128 EVTPIPEDTTPKIKRNPQPGWNTEQNLVLISGWIKFGTCSLVGRNQTSEAYWGKIAEYCN 187

Query: 194 QTPGITDPRSVDSLRQRYRRLNKNVTAWVGAYQKA 298
           +      PR V + R R+  ++K +  W+GAY+ A
Sbjct: 188 EHCSFDPPRDVIACRNRFNYMSKVINEWIGAYENA 222


>gb|ABW81022.1| unknown [Arabidopsis lyrata subsp. lyrata]
          Length = 321

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
 Frame = +2

Query: 11  TPENEPSPQNTSKKTSNAPKG*---TNQQDVTLMFAYCFVSTNAIVGTNQKDAVLWKKVH 181
           T   E + Q  S K  + P+     T+Q+D+ L+ A+   S +AIVG  Q+    WK++ 
Sbjct: 55  TEATEATTQGGSAKAKSTPRKRNKWTSQEDLVLISAWLNTSKDAIVGNEQRGVAFWKRIA 114

Query: 182 DLYNQTPGIT--DPRSVDSLRQRYRRLNKNVTAWVGAYQKAYGR 307
             Y  +P I+    R     +QR+ ++N+ V  +VG++Q A G+
Sbjct: 115 AYYAASPNISGEKKREPTHFKQRWAKINEQVCKFVGSFQAAAGQ 158


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