BLASTX nr result
ID: Mentha25_contig00029397
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00029397
(408 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom... 69 9e-10
emb|CBI19367.3| unnamed protein product [Vitis vinifera] 69 9e-10
gb|EYU36395.1| hypothetical protein MIMGU_mgv1a000784mg [Mimulus... 68 1e-09
ref|XP_002320019.2| FF domain-containing family protein [Populus... 67 3e-09
ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-l... 67 3e-09
ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-l... 67 3e-09
ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-l... 67 3e-09
ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-l... 65 8e-09
ref|XP_006644255.1| PREDICTED: pre-mRNA-processing protein 40A-l... 65 1e-08
ref|XP_006644254.1| PREDICTED: pre-mRNA-processing protein 40A-l... 65 1e-08
ref|XP_006644253.1| PREDICTED: pre-mRNA-processing protein 40A-l... 65 1e-08
ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [A... 65 1e-08
gb|EEE54732.1| hypothetical protein OsJ_02081 [Oryza sativa Japo... 65 1e-08
gb|EEC70813.1| hypothetical protein OsI_02277 [Oryza sativa Indi... 65 1e-08
gb|EPS62863.1| hypothetical protein M569_11923, partial [Genlise... 64 2e-08
ref|XP_007018443.1| Pre-mRNA-processing protein 40A isoform 8 [T... 64 3e-08
ref|XP_007018442.1| Pre-mRNA-processing protein 40A isoform 7 [T... 64 3e-08
ref|XP_007018441.1| Pre-mRNA-processing protein 40A isoform 6 [T... 64 3e-08
ref|XP_007018440.1| Pre-mRNA-processing protein 40A isoform 5 [T... 64 3e-08
ref|XP_007018439.1| Pre-mRNA-processing protein 40A isoform 4 [T... 64 3e-08
>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
vinifera]
Length = 1020
Score = 68.6 bits (166), Expect = 9e-10
Identities = 34/85 (40%), Positives = 46/85 (54%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXXSRPEMNXXXXXXXX 180
STVWKEFTT EGRKYYYNK TKQSKWTIP+ ++ EM
Sbjct: 265 STVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAEKSVSQETQSEMGTTSNEPAV 324
Query: 181 XXXXXEQPPAAVNLTISNTSTPTKS 255
+ P+ ++++S+T++ T S
Sbjct: 325 VAVSLAETPSTASVSVSSTTSSTIS 349
>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
Length = 1030
Score = 68.6 bits (166), Expect = 9e-10
Identities = 34/85 (40%), Positives = 46/85 (54%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXXSRPEMNXXXXXXXX 180
STVWKEFTT EGRKYYYNK TKQSKWTIP+ ++ EM
Sbjct: 261 STVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAEKSVSQETQSEMGTTSNEPAV 320
Query: 181 XXXXXEQPPAAVNLTISNTSTPTKS 255
+ P+ ++++S+T++ T S
Sbjct: 321 VAVSLAETPSTASVSVSSTTSSTIS 345
>gb|EYU36395.1| hypothetical protein MIMGU_mgv1a000784mg [Mimulus guttatus]
Length = 987
Score = 68.2 bits (165), Expect = 1e-09
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPD 90
STVWKEFTT EGRKYYYNKETKQSKWTIPD
Sbjct: 243 STVWKEFTTSEGRKYYYNKETKQSKWTIPD 272
>ref|XP_002320019.2| FF domain-containing family protein [Populus trichocarpa]
gi|550323102|gb|EEE98334.2| FF domain-containing family
protein [Populus trichocarpa]
Length = 1019
Score = 67.0 bits (162), Expect = 3e-09
Identities = 46/133 (34%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXXSRPEMNXXXXXXXX 180
STVWKEFTTQEG+KYYYNK TKQSKW+IP+ ++ E +
Sbjct: 239 STVWKEFTTQEGKKYYYNKVTKQSKWSIPEELKMAREQAQQTVGQGNQSETD-------- 290
Query: 181 XXXXXEQPPAAVNLTISNTSTPTKS-TGAGVDLXXXXXXXXXXXXXXXXXXXMASEPRAV 357
P AV +T S TST S + + V L + S A+
Sbjct: 291 ---AASNVPTAVAVTSSETSTTAVSVSSSSVMLPGVSSSPISVTAVANPPPVVVSGSPAL 347
Query: 358 PVMQTAAASVTGV 396
PV + AS GV
Sbjct: 348 PVAHSTTASAVGV 360
>ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X3 [Solanum
tuberosum]
Length = 864
Score = 66.6 bits (161), Expect = 3e-09
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPD 90
STVWKEFTT +GRKYYYNKETKQSKWTIPD
Sbjct: 236 STVWKEFTTADGRKYYYNKETKQSKWTIPD 265
>ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Solanum
tuberosum]
Length = 872
Score = 66.6 bits (161), Expect = 3e-09
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPD 90
STVWKEFTT +GRKYYYNKETKQSKWTIPD
Sbjct: 236 STVWKEFTTADGRKYYYNKETKQSKWTIPD 265
>ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Solanum
tuberosum]
Length = 1031
Score = 66.6 bits (161), Expect = 3e-09
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPD 90
STVWKEFTT +GRKYYYNKETKQSKWTIPD
Sbjct: 236 STVWKEFTTADGRKYYYNKETKQSKWTIPD 265
>ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-like [Solanum
lycopersicum]
Length = 998
Score = 65.5 bits (158), Expect = 8e-09
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPD 90
STVWKEFTT +GRKYYYNKETKQSKWT+PD
Sbjct: 236 STVWKEFTTADGRKYYYNKETKQSKWTMPD 265
>ref|XP_006644255.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X3 [Oryza
brachyantha]
Length = 840
Score = 65.1 bits (157), Expect = 1e-08
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPD 90
ST WKEFTTQEGRKYYYNK TKQSKWTIPD
Sbjct: 108 STEWKEFTTQEGRKYYYNKVTKQSKWTIPD 137
>ref|XP_006644254.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Oryza
brachyantha]
Length = 865
Score = 65.1 bits (157), Expect = 1e-08
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPD 90
ST WKEFTTQEGRKYYYNK TKQSKWTIPD
Sbjct: 107 STEWKEFTTQEGRKYYYNKVTKQSKWTIPD 136
>ref|XP_006644253.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Oryza
brachyantha]
Length = 866
Score = 65.1 bits (157), Expect = 1e-08
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPD 90
ST WKEFTTQEGRKYYYNK TKQSKWTIPD
Sbjct: 108 STEWKEFTTQEGRKYYYNKVTKQSKWTIPD 137
>ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [Amborella trichopoda]
gi|548831471|gb|ERM94279.1| hypothetical protein
AMTR_s00010p00227470 [Amborella trichopoda]
Length = 985
Score = 65.1 bits (157), Expect = 1e-08
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPD 90
STVWKEFTT EGRKYYYNK TKQSKWTIPD
Sbjct: 253 STVWKEFTTPEGRKYYYNKVTKQSKWTIPD 282
>gb|EEE54732.1| hypothetical protein OsJ_02081 [Oryza sativa Japonica Group]
Length = 1002
Score = 65.1 bits (157), Expect = 1e-08
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPD 90
ST WKEFTTQEGRKYYYNK TKQSKWTIPD
Sbjct: 238 STEWKEFTTQEGRKYYYNKVTKQSKWTIPD 267
>gb|EEC70813.1| hypothetical protein OsI_02277 [Oryza sativa Indica Group]
Length = 1026
Score = 65.1 bits (157), Expect = 1e-08
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPD 90
ST WKEFTTQEGRKYYYNK TKQSKWTIPD
Sbjct: 200 STEWKEFTTQEGRKYYYNKVTKQSKWTIPD 229
>gb|EPS62863.1| hypothetical protein M569_11923, partial [Genlisea aurea]
Length = 580
Score = 63.9 bits (154), Expect = 2e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPD 90
STVWKEF+T EG+KYYYNKETK+SKWTIPD
Sbjct: 178 STVWKEFSTPEGKKYYYNKETKESKWTIPD 207
>ref|XP_007018443.1| Pre-mRNA-processing protein 40A isoform 8 [Theobroma cacao]
gi|508723771|gb|EOY15668.1| Pre-mRNA-processing protein
40A isoform 8 [Theobroma cacao]
Length = 789
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPD 90
STVWKEFTT EGRKYYYNK TKQSKWTIP+
Sbjct: 264 STVWKEFTTPEGRKYYYNKVTKQSKWTIPE 293
>ref|XP_007018442.1| Pre-mRNA-processing protein 40A isoform 7 [Theobroma cacao]
gi|508723770|gb|EOY15667.1| Pre-mRNA-processing protein
40A isoform 7 [Theobroma cacao]
Length = 787
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPD 90
STVWKEFTT EGRKYYYNK TKQSKWTIP+
Sbjct: 264 STVWKEFTTPEGRKYYYNKVTKQSKWTIPE 293
>ref|XP_007018441.1| Pre-mRNA-processing protein 40A isoform 6 [Theobroma cacao]
gi|508723769|gb|EOY15666.1| Pre-mRNA-processing protein
40A isoform 6 [Theobroma cacao]
Length = 774
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPD 90
STVWKEFTT EGRKYYYNK TKQSKWTIP+
Sbjct: 264 STVWKEFTTPEGRKYYYNKVTKQSKWTIPE 293
>ref|XP_007018440.1| Pre-mRNA-processing protein 40A isoform 5 [Theobroma cacao]
gi|508723768|gb|EOY15665.1| Pre-mRNA-processing protein
40A isoform 5 [Theobroma cacao]
Length = 904
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPD 90
STVWKEFTT EGRKYYYNK TKQSKWTIP+
Sbjct: 264 STVWKEFTTPEGRKYYYNKVTKQSKWTIPE 293
>ref|XP_007018439.1| Pre-mRNA-processing protein 40A isoform 4 [Theobroma cacao]
gi|508723767|gb|EOY15664.1| Pre-mRNA-processing protein
40A isoform 4 [Theobroma cacao]
Length = 844
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +1
Query: 1 STVWKEFTTQEGRKYYYNKETKQSKWTIPD 90
STVWKEFTT EGRKYYYNK TKQSKWTIP+
Sbjct: 264 STVWKEFTTPEGRKYYYNKVTKQSKWTIPE 293