BLASTX nr result
ID: Mentha25_contig00029202
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00029202
(333 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU44781.1| hypothetical protein MIMGU_mgv1a001071mg [Mimulus... 104 1e-20
ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containin... 65 8e-09
ref|XP_002324006.1| hypothetical protein POPTR_0017s10830g [Popu... 60 3e-07
ref|XP_002300018.2| RNA recognition motif-containing family prot... 60 4e-07
ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis] ... 60 4e-07
emb|CBI34878.3| unnamed protein product [Vitis vinifera] 59 5e-07
ref|XP_006341318.1| PREDICTED: zinc finger CCCH domain-containin... 58 2e-06
gb|EXC20328.1| Zinc finger CCCH domain-containing protein 41 [Mo... 57 2e-06
ref|XP_007031557.1| Zinc finger family protein / RNA recognition... 57 2e-06
ref|XP_004489225.1| PREDICTED: zinc finger CCCH domain-containin... 57 2e-06
ref|XP_004252213.1| PREDICTED: zinc finger CCCH domain-containin... 57 3e-06
>gb|EYU44781.1| hypothetical protein MIMGU_mgv1a001071mg [Mimulus guttatus]
Length = 896
Score = 104 bits (259), Expect = 1e-20
Identities = 54/108 (50%), Positives = 64/108 (59%)
Frame = +1
Query: 7 ILDKGKENSHLPAGKDSNSHMPVAQQLAHDHPKSTNTNGSKAPPPQQXXXXXXXXXXXXX 186
+LDKGK + H +GKD N H V+QQ +DH K NG KAPP QQ
Sbjct: 574 VLDKGKGSPHPASGKDGNGHPSVSQQSVYDHSKLVVANGPKAPPLQQKKLENLELLKEEL 633
Query: 187 XXXXXMLDQKRDEFRRELDKLQKQGVGSKDATTSALTPKRSKGDTLPN 330
MLDQKR+EFRR+LDKL+KQ VG D T S LTPK+ KG+T N
Sbjct: 634 RKKQEMLDQKRNEFRRQLDKLEKQAVGPNDVTASDLTPKKLKGETPSN 681
>ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Vitis vinifera]
Length = 948
Score = 65.5 bits (158), Expect = 8e-09
Identities = 39/103 (37%), Positives = 49/103 (47%)
Frame = +1
Query: 4 SILDKGKENSHLPAGKDSNSHMPVAQQLAHDHPKSTNTNGSKAPPPQQXXXXXXXXXXXX 183
S +++ K+N A K + H A DH K TNG KAPPP Q
Sbjct: 593 SAVNRAKDNLQSAAPKVNAVHAIDAPSPTSDHSKPIVTNGPKAPPPLQKKLESLELMKEE 652
Query: 184 XXXXXXMLDQKRDEFRRELDKLQKQGVGSKDATTSALTPKRSK 312
MLDQKR++FRR+LDKL+KQ G K + KR K
Sbjct: 653 LRKKQEMLDQKRNDFRRQLDKLEKQATGLKGEVGAEQAAKRPK 695
>ref|XP_002324006.1| hypothetical protein POPTR_0017s10830g [Populus trichocarpa]
gi|222867008|gb|EEF04139.1| hypothetical protein
POPTR_0017s10830g [Populus trichocarpa]
Length = 964
Score = 60.1 bits (144), Expect = 3e-07
Identities = 38/100 (38%), Positives = 47/100 (47%)
Frame = +1
Query: 13 DKGKENSHLPAGKDSNSHMPVAQQLAHDHPKSTNTNGSKAPPPQQXXXXXXXXXXXXXXX 192
+ GK+N L K + VA A DH K TN K PPP Q
Sbjct: 585 NSGKDNLQLSVSKATAVPPSVAPVPAIDHSKVITTNVPKVPPPMQKLESLEQLKEELRKK 644
Query: 193 XXXMLDQKRDEFRRELDKLQKQGVGSKDATTSALTPKRSK 312
+LDQKR++FRR+LDKL+KQ G K T+ KR K
Sbjct: 645 QE-LLDQKRNDFRRQLDKLEKQATGVKGEVTAEPASKRHK 683
>ref|XP_002300018.2| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|550348869|gb|EEE84823.2| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 981
Score = 59.7 bits (143), Expect = 4e-07
Identities = 36/103 (34%), Positives = 46/103 (44%)
Frame = +1
Query: 4 SILDKGKENSHLPAGKDSNSHMPVAQQLAHDHPKSTNTNGSKAPPPQQXXXXXXXXXXXX 183
SI + GK+N L K + A DHPK TNG + PP Q
Sbjct: 582 SIGNSGKDNLQLAISKTTVVPTSDTSMPATDHPKVDITNGPEVSPPMQKKLENLEQLKEE 641
Query: 184 XXXXXXMLDQKRDEFRRELDKLQKQGVGSKDATTSALTPKRSK 312
+LDQKR++FRR+L KL+KQ G K + KR K
Sbjct: 642 LRKKQELLDQKRNDFRRQLHKLEKQATGVKGEVATEPASKRQK 684
>ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis]
gi|223536016|gb|EEF37674.1| rrm/rnp domain, putative
[Ricinus communis]
Length = 972
Score = 59.7 bits (143), Expect = 4e-07
Identities = 37/102 (36%), Positives = 47/102 (46%)
Frame = +1
Query: 7 ILDKGKENSHLPAGKDSNSHMPVAQQLAHDHPKSTNTNGSKAPPPQQXXXXXXXXXXXXX 186
I ++GK+N A K + P A DHPK TNG K PPP Q
Sbjct: 594 IANRGKDNLQSAASKGATVPPPDASLPPTDHPKPVITNGPKVPPPLQ-KKLELEQLKEEL 652
Query: 187 XXXXXMLDQKRDEFRRELDKLQKQGVGSKDATTSALTPKRSK 312
+L QKR++FRR+LDKL+KQ G K KR +
Sbjct: 653 RKKQELLAQKRNDFRRQLDKLEKQATGVKGEVVVEPAAKRHR 694
>emb|CBI34878.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 59.3 bits (142), Expect = 5e-07
Identities = 32/73 (43%), Positives = 37/73 (50%)
Frame = +1
Query: 94 DHPKSTNTNGSKAPPPQQXXXXXXXXXXXXXXXXXXMLDQKRDEFRRELDKLQKQGVGSK 273
DH K TNG KAPPP Q MLDQKR++FRR+LDKL+KQ G K
Sbjct: 435 DHSKPIVTNGPKAPPPLQKKLESLELMKEELRKKQEMLDQKRNDFRRQLDKLEKQATGLK 494
Query: 274 DATTSALTPKRSK 312
+ KR K
Sbjct: 495 GEVGAEQAAKRPK 507
>ref|XP_006341318.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Solanum tuberosum]
Length = 924
Score = 57.8 bits (138), Expect = 2e-06
Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Frame = +1
Query: 4 SILDKGKENSHLPAGKDSNSHMPVAQQLAHDHPKSTNTNGSKAPPPQQXXXXXXXXXXXX 183
S+ KGK+N A K + H PVA PK NG KA P Q
Sbjct: 567 SVPYKGKDNIQSSALKAAE-HGPVAPSPTSALPKPVAHNGPKAAPALQTKVASLELLKEE 625
Query: 184 XXXXXXMLDQKRDEFRRELDKLQKQGVGSK-DATTSALTPKRSKGDTL 324
+LDQKR+EFRR+L+KL+KQ VG K +A + K+ +G+T+
Sbjct: 626 LRKKQELLDQKRNEFRRQLNKLEKQAVGVKAEAVSDQDLEKQKEGETV 673
>gb|EXC20328.1| Zinc finger CCCH domain-containing protein 41 [Morus notabilis]
Length = 930
Score = 57.4 bits (137), Expect = 2e-06
Identities = 38/103 (36%), Positives = 49/103 (47%)
Frame = +1
Query: 4 SILDKGKENSHLPAGKDSNSHMPVAQQLAHDHPKSTNTNGSKAPPPQQXXXXXXXXXXXX 183
S+ + K+N A K S H VA D P TNGSK PP Q+
Sbjct: 577 SLANSSKDNLQAAAPKSSTVHTHVAS--LPDKPSPVVTNGSKVPPLQKKLGSLEQLKEEL 634
Query: 184 XXXXXXMLDQKRDEFRRELDKLQKQGVGSKDATTSALTPKRSK 312
ML+QKR++FRR+LDKL+KQ G K + + KR K
Sbjct: 635 RKKQE-MLEQKRNDFRRKLDKLEKQATGIKGDSDTEQVAKRPK 676
>ref|XP_007031557.1| Zinc finger family protein / RNA recognition motif-containing
protein, putative [Theobroma cacao]
gi|508710586|gb|EOY02483.1| Zinc finger family protein /
RNA recognition motif-containing protein, putative
[Theobroma cacao]
Length = 941
Score = 57.4 bits (137), Expect = 2e-06
Identities = 38/117 (32%), Positives = 52/117 (44%), Gaps = 14/117 (11%)
Frame = +1
Query: 4 SILDKGKENSHLPA-------GKDSNSHMPVAQQLAH-------DHPKSTNTNGSKAPPP 141
SI +G S +P+ GKD+ +P + H + PK + NG K PPP
Sbjct: 572 SITPRGLTASVIPSQTSVANRGKDNLQPIPQKSNVVHGADVPSLNSPKPVSANGPKVPPP 631
Query: 142 QQXXXXXXXXXXXXXXXXXXMLDQKRDEFRRELDKLQKQGVGSKDATTSALTPKRSK 312
Q ML+QKR++FRR+LDKL+KQ G K + KR K
Sbjct: 632 LQKKFETLEQMKEELRKKQEMLEQKRNDFRRQLDKLEKQSSGVKGDLMTEQAAKRQK 688
>ref|XP_004489225.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Cicer arietinum]
Length = 918
Score = 57.4 bits (137), Expect = 2e-06
Identities = 36/102 (35%), Positives = 47/102 (46%)
Frame = +1
Query: 7 ILDKGKENSHLPAGKDSNSHMPVAQQLAHDHPKSTNTNGSKAPPPQQXXXXXXXXXXXXX 186
+ DKGK+ H P ++ + D PK +GSK PPP Q
Sbjct: 580 VTDKGKD-IHQP----DSTRTVLEVSSPSDQPKPVIADGSKVPPPLQRKLDNLEYLKEEL 634
Query: 187 XXXXXMLDQKRDEFRRELDKLQKQGVGSKDATTSALTPKRSK 312
MLDQKR+EFRR+L+KL+KQ G K + KR K
Sbjct: 635 RKKQEMLDQKRNEFRRQLNKLEKQATGLKGEVATEQAAKRPK 676
>ref|XP_004252213.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Solanum lycopersicum]
Length = 877
Score = 56.6 bits (135), Expect = 3e-06
Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Frame = +1
Query: 4 SILDKGKENSHLPAGKDSNSHMPVAQQLAHDHPKSTNTNGSKAPPPQQXXXXXXXXXXXX 183
S+ KG +N A K + H PVA PK NG KA P Q
Sbjct: 569 SVPYKGNDNIQSSAPKAAE-HGPVAPSPTSALPKPVGHNGPKAAPALQKKVASLELLKVE 627
Query: 184 XXXXXXMLDQKRDEFRRELDKLQKQGVGSK-DATTSALTPKRSKGDTL 324
+LDQKR EFRR+L+KL+KQ VG K +A + K+ +G+T+
Sbjct: 628 LRKKQELLDQKRSEFRRQLNKLEKQAVGVKAEAISDQDLEKQKEGETV 675