BLASTX nr result

ID: Mentha25_contig00023834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00023834
         (352 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234387.1| starch synthase VI [Solanum lycopersicum] gi...    60   2e-07
ref|XP_006353747.1| PREDICTED: probable starch synthase 4, chlor...    59   5e-07
ref|XP_006353746.1| PREDICTED: probable starch synthase 4, chlor...    59   5e-07
ref|XP_007208471.1| hypothetical protein PRUPE_ppa004088mg [Prun...    57   3e-06
ref|XP_004296633.1| PREDICTED: probable starch synthase 4, chlor...    56   6e-06

>ref|NP_001234387.1| starch synthase VI [Solanum lycopersicum]
           gi|187611221|gb|ACD13790.1| starch synthase VI precursor
           [Solanum lycopersicum]
          Length = 614

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
 Frame = -1

Query: 289 STPRNCFSSLFLLPNPNKYHFKNFKKRVTALKHE--LCANYRLKSLSKNFRIQALETEAN 116
           S+  NC SS       ++  + N   +   LK +  + + Y+L+    NF IQ +     
Sbjct: 20  SSSYNCSSSF-----NHRSCYNNISSKANLLKKQSYVFSKYQLR----NFNIQLVPRIEA 70

Query: 115 QLEAIA-EASRTESQYDNLTWPSPSDEVPFWKREFPSWD 2
           QL+A   E S    + D L WPSPSDE+PFWK +FPSWD
Sbjct: 71  QLKAEQLEGSEAGCESDGLRWPSPSDEIPFWKGDFPSWD 109


>ref|XP_006353747.1| PREDICTED: probable starch synthase 4,
           chloroplastic/amyloplastic-like isoform X2 [Solanum
           tuberosum]
          Length = 504

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
 Frame = -1

Query: 289 STPRNCFSSLFLLPNPNKYHFKNFKKRVTALKHE--LCANYRLKSLSKNFRIQALETEAN 116
           S+  NC SS       ++  + N   +   LK +  + + Y+L+    NF+I+ +     
Sbjct: 20  SSNNNCSSSF-----NHRSCYNNISSKANLLKKQSYVFSKYQLR----NFKIRRVPRIEA 70

Query: 115 QLEAIA-EASRTESQYDNLTWPSPSDEVPFWKREFPSWD 2
           QL+A   E+S    + D L WPSP+DE+PFWK +FPSWD
Sbjct: 71  QLKAEQLESSEAGCESDGLQWPSPNDEIPFWKGDFPSWD 109


>ref|XP_006353746.1| PREDICTED: probable starch synthase 4,
           chloroplastic/amyloplastic-like isoform X1 [Solanum
           tuberosum]
          Length = 621

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
 Frame = -1

Query: 289 STPRNCFSSLFLLPNPNKYHFKNFKKRVTALKHE--LCANYRLKSLSKNFRIQALETEAN 116
           S+  NC SS       ++  + N   +   LK +  + + Y+L+    NF+I+ +     
Sbjct: 20  SSNNNCSSSF-----NHRSCYNNISSKANLLKKQSYVFSKYQLR----NFKIRRVPRIEA 70

Query: 115 QLEAIA-EASRTESQYDNLTWPSPSDEVPFWKREFPSWD 2
           QL+A   E+S    + D L WPSP+DE+PFWK +FPSWD
Sbjct: 71  QLKAEQLESSEAGCESDGLQWPSPNDEIPFWKGDFPSWD 109


>ref|XP_007208471.1| hypothetical protein PRUPE_ppa004088mg [Prunus persica]
           gi|462404113|gb|EMJ09670.1| hypothetical protein
           PRUPE_ppa004088mg [Prunus persica]
          Length = 531

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/86 (32%), Positives = 48/86 (55%)
 Frame = -1

Query: 259 FLLPNPNKYHFKNFKKRVTALKHELCANYRLKSLSKNFRIQALETEANQLEAIAEASRTE 80
           F  P+ ++      ++R+   ++   + + L S SK F+IQA    ++++    + S T+
Sbjct: 13  FFGPSSSRLSNPRRRRRIVLNRNNGLSAHNLCSSSK-FKIQAQTHLSSEVGIAKQGSLTD 71

Query: 79  SQYDNLTWPSPSDEVPFWKREFPSWD 2
                  WPSP+DE+PFWK+ FPSWD
Sbjct: 72  FGIQEFVWPSPTDEIPFWKKGFPSWD 97


>ref|XP_004296633.1| PREDICTED: probable starch synthase 4,
           chloroplastic/amyloplastic-like [Fragaria vesca subsp.
           vesca]
          Length = 593

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/56 (41%), Positives = 33/56 (58%)
 Frame = -1

Query: 169 LKSLSKNFRIQALETEANQLEAIAEASRTESQYDNLTWPSPSDEVPFWKREFPSWD 2
           LK+ +  FRI+A     +Q+      + T        WPSP+DE+PFWK++FPSWD
Sbjct: 28  LKAHNFKFRIEAQTHRTSQVGIAKPTNLTHLDIQGFDWPSPTDEIPFWKKQFPSWD 83


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