BLASTX nr result

ID: Mentha25_contig00023387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00023387
         (379 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU35090.1| hypothetical protein MIMGU_mgv1a008557mg [Mimulus...    91   1e-16
gb|EYU32122.1| hypothetical protein MIMGU_mgv1a012273mg [Mimulus...    82   8e-14
gb|AGZ15278.1| putative zinc finger CCCH domain-containing prote...    67   2e-09
gb|EPS63418.1| hypothetical protein M569_11366 [Genlisea aurea]        65   7e-09
ref|XP_006347596.1| PREDICTED: zinc finger CCCH domain-containin...    57   2e-06
ref|NP_564396.1| zinc finger CCCH domain-containing protein 12 [...    57   3e-06
ref|XP_002890985.1| zinc finger (CCCH-type) family protein [Arab...    57   3e-06
ref|XP_004241444.1| PREDICTED: zinc finger CCCH domain-containin...    56   6e-06
ref|XP_006347340.1| PREDICTED: zinc finger CCCH domain-containin...    55   8e-06
ref|XP_006415209.1| hypothetical protein EUTSA_v10007908mg [Eutr...    55   8e-06
ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containin...    55   8e-06

>gb|EYU35090.1| hypothetical protein MIMGU_mgv1a008557mg [Mimulus guttatus]
          Length = 369

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 46/78 (58%), Positives = 53/78 (67%), Gaps = 9/78 (11%)
 Frame = -3

Query: 248 MDYRRENRSSSGDVVHVLAGNTRNPVNDNWGSAFIDQAVWATEDDYGMWNPETSFDTNSN 69
           MDY REN  SSG+VV +L GN+ N V++NWGSA  DQAVWATEDDYGMWN E S D +SN
Sbjct: 1   MDYNRENGFSSGNVVQILTGNSVNNVDENWGSASNDQAVWATEDDYGMWNNEISMDLDSN 60

Query: 68  S---------SYDGPPNK 42
           +         S   PPNK
Sbjct: 61  NYEIRVSQSRSGSEPPNK 78


>gb|EYU32122.1| hypothetical protein MIMGU_mgv1a012273mg [Mimulus guttatus]
          Length = 255

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 39/69 (56%), Positives = 46/69 (66%)
 Frame = -3

Query: 248 MDYRRENRSSSGDVVHVLAGNTRNPVNDNWGSAFIDQAVWATEDDYGMWNPETSFDTNSN 69
           MDY  EN  SSG+VV VL+GN  N  N+N G  F DQA+WATEDDYG+WN E +  + S 
Sbjct: 1   MDYPWENGFSSGNVVQVLSGNPTNTGNENMGPTFEDQAMWATEDDYGLWNAEDTRQSQSR 60

Query: 68  SSYDGPPNK 42
              D PPNK
Sbjct: 61  LESDQPPNK 69


>gb|AGZ15278.1| putative zinc finger CCCH domain-containing protein 56, partial
           [Taraxacum brevicorniculatum]
          Length = 380

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 35/65 (53%), Positives = 43/65 (66%)
 Frame = -3

Query: 248 MDYRRENRSSSGDVVHVLAGNTRNPVNDNWGSAFIDQAVWATEDDYGMWNPETSFDTNSN 69
           MDY RE    SG+VV ++ G +RN   D WG    DQ VWATED+YG+W+ E S D  SN
Sbjct: 1   MDYGRE----SGNVVQIITGGSRNG-GDFWG----DQPVWATEDEYGVWDREASVDNTSN 51

Query: 68  SSYDG 54
           S+YDG
Sbjct: 52  SNYDG 56


>gb|EPS63418.1| hypothetical protein M569_11366 [Genlisea aurea]
          Length = 367

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
 Frame = -3

Query: 248 MDYRRENRSSSGDVVHVLAGN--TRNPVNDNWGSAFIDQAVWATEDDYGMWNPETSFDTN 75
           MDYR++N  S G+VV ++ GN  + N   +NWG    +QAVWATE+DY MW+ E+S   N
Sbjct: 1   MDYRQDNGFSVGNVVQIIGGNGNSTNVSQENWGPMPTNQAVWATEEDYSMWSGESSVINN 60

Query: 74  -SNSSYDG 54
            S   YDG
Sbjct: 61  PSTPLYDG 68


>ref|XP_006347596.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
           [Solanum tuberosum]
          Length = 349

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/38 (65%), Positives = 27/38 (71%)
 Frame = -3

Query: 167 DNWGSAFIDQAVWATEDDYGMWNPETSFDTNSNSSYDG 54
           DNWGS F DQ VWATEDDY  WN   S +T SNS+ DG
Sbjct: 19  DNWGSGFPDQEVWATEDDYRAWNAGLSSETPSNSNQDG 56


>ref|NP_564396.1| zinc finger CCCH domain-containing protein 12 [Arabidopsis
           thaliana] gi|75264181|sp|Q9LQM3.1|C3H12_ARATH RecName:
           Full=Zinc finger CCCH domain-containing protein 12;
           Short=AtC3H12 gi|8920610|gb|AAF81332.1|AC007767_12
           Contains similarity to an unknown protein At2g35430
           gi|3608145 from Arabidopsis thaliana BAC T32F12
           gb|AC005314. It contains a zinc finger C-x8-C-x5-C-x3-H
           type domain PF|00642. ESTs gb|AV557765 and gb|AV544407
           come from this gene [Arabidopsis thaliana]
           gi|12597862|gb|AAG60171.1|AC084110_4 unknown protein
           [Arabidopsis thaliana] gi|26451083|dbj|BAC42646.1|
           putative RING-H2 zinc finger protein ATL6 [Arabidopsis
           thaliana] gi|332193347|gb|AEE31468.1| zinc finger CCCH
           domain-containing protein 12 [Arabidopsis thaliana]
          Length = 384

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/65 (50%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
 Frame = -3

Query: 227 RSSSGDVVHVLAGNTRNPVNDNWGSAFIDQAVWATEDDYG-MW--NPETSFDTNSNSSYD 57
           R S GDVVHV+   T NP  DNW     D AVWATEDDY   W  NP+     N++   +
Sbjct: 6   RDSGGDVVHVIP--TNNPPPDNWFPNLGDSAVWATEDDYNRAWAMNPD-----NTSGDNN 58

Query: 56  GPPNK 42
           GPPNK
Sbjct: 59  GPPNK 63


>ref|XP_002890985.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297336827|gb|EFH67244.1| zinc finger
           (CCCH-type) family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 385

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/65 (50%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
 Frame = -3

Query: 227 RSSSGDVVHVLAGNTRNPVNDNWGSAFIDQAVWATEDDYG-MW--NPETSFDTNSNSSYD 57
           R S GDVVHV+   T NP  DNW     D AVWATEDDY   W  NP+     N++   +
Sbjct: 7   RDSGGDVVHVIP--TNNPPPDNWFPNLGDSAVWATEDDYNRAWAVNPD-----NTSGDNN 59

Query: 56  GPPNK 42
           GPPNK
Sbjct: 60  GPPNK 64


>ref|XP_004241444.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
           [Solanum lycopersicum]
          Length = 357

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/79 (41%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
 Frame = -3

Query: 248 MDYRRENRSSSGDVVHVLAGNTRNPVNDNWGSAFIDQAVWATEDDYGMWNPETSFDTNSN 69
           MD+  E   + G+V+            D+WG  F DQAVWATEDDY  WN     +T SN
Sbjct: 1   MDFTGEAGFAGGNVIPDSTAGVGG--YDSWGPNFSDQAVWATEDDYKAWNSGPYCETPSN 58

Query: 68  SSYDG----------PPNK 42
           SS DG          PPNK
Sbjct: 59  SSQDGRHSQNRSGSEPPNK 77


>ref|XP_006347340.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
           [Solanum tuberosum]
          Length = 357

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/52 (53%), Positives = 30/52 (57%), Gaps = 10/52 (19%)
 Frame = -3

Query: 167 DNWGSAFIDQAVWATEDDYGMWNPETSFDTNSNSSYDG----------PPNK 42
           D+WG  F DQAVWATEDDY  WN     +T SNSS DG          PPNK
Sbjct: 26  DSWGPNFSDQAVWATEDDYKAWNTGPFCETPSNSSQDGRHSQNRSGSEPPNK 77


>ref|XP_006415209.1| hypothetical protein EUTSA_v10007908mg [Eutrema salsugineum]
           gi|557092980|gb|ESQ33562.1| hypothetical protein
           EUTSA_v10007908mg [Eutrema salsugineum]
          Length = 383

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 30/62 (48%), Positives = 38/62 (61%)
 Frame = -3

Query: 227 RSSSGDVVHVLAGNTRNPVNDNWGSAFIDQAVWATEDDYGMWNPETSFDTNSNSSYDGPP 48
           R S GDVVHV+   T NP  +NW     D AVWATEDDY   N   + + +++S  +GPP
Sbjct: 5   RDSGGDVVHVIP--TNNPPPENWFPNLGDSAVWATEDDY---NRVWAVNPDNSSGDNGPP 59

Query: 47  NK 42
           NK
Sbjct: 60  NK 61


>ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Vitis vinifera]
          Length = 372

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 10/52 (19%)
 Frame = -3

Query: 167 DNWGSAFIDQAVWATEDDYGMWNPETSFDTNSNSSYDG----------PPNK 42
           DNW     DQ VWATEDDY +WN + S DT SNS+Y+G          PPNK
Sbjct: 18  DNWIPGSSDQLVWATEDDYAVWNGDGSGDTPSNSNYEGRQSQSRSGSEPPNK 69


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