BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00022702
         (425 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]   266   2e-69
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...   211   1e-52
gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]   204   1e-50
gb|EPS70289.1| hypothetical protein M569_04468, partial [Genlise...   181   7e-44
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   180   2e-43
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de...   179   5e-43
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de...   179   5e-43
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   177   2e-42
gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu...   177   2e-42
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   176   4e-42
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu...   176   4e-42
gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum de...   176   4e-42
gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tu...   176   4e-42
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...   175   5e-42
gb|AAT38699.2| RNA dependent RNA polymerase family protein [Sola...   175   5e-42
gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola...   175   5e-42
gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tu...   175   7e-42
gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solan...   175   7e-42
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   174   1e-41
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...   174   1e-41

>gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]
          Length = 1118

 Score =  266 bits (681), Expect = 2e-69
 Identities = 118/141 (83%), Positives = 131/141 (92%)
 Frame = -1

Query: 425 RLLFKVCCLVQNGCLPGPKLDKNFYKLINPEKFDIAYLEQVLEKIYYMKECCYDPHSWLI 246
           RLLFKVCCLVQ GCLPGPKLD NFY+L+NP+ FDI YLEQ+LEK+YY+KECCYDPHSWLI
Sbjct: 210 RLLFKVCCLVQTGCLPGPKLDDNFYRLLNPKSFDITYLEQLLEKLYYLKECCYDPHSWLI 269

Query: 245 EQHQNYRTFKKPRPPPADDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHIDNFLR 66
           EQHQNY TFKKP+PP  +DDLVHIHR+QVTPTKVYF+GPE NVSNRVLR F +HIDNFLR
Sbjct: 270 EQHQNYCTFKKPKPPAVNDDLVHIHRVQVTPTKVYFHGPEANVSNRVLRNFHDHIDNFLR 329

Query: 65  VSFVEEDWSKMYSADLSPRGA 3
           VSFVEEDWSKMY++DLSPRGA
Sbjct: 330 VSFVEEDWSKMYASDLSPRGA 350


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score =  211 bits (536), Expect = 1e-52
 Identities = 97/143 (67%), Positives = 118/143 (82%), Gaps = 3/143 (2%)
 Frame = -1

Query: 422 LLFKVCCLVQNGCLPGPKLDKNFYKLINPEKFDIAYLEQVLEKIYYMKECCYDPHSWLIE 243
           LLFKVC LVQ GCLPGPKLD++F+ L+NP K DI Y+E  LEK+YY+KECCY+P +WL E
Sbjct: 272 LLFKVCSLVQTGCLPGPKLDRSFFDLVNPAKHDIRYIEHALEKLYYLKECCYNPAAWLKE 331

Query: 242 QHQNYRTFKKPRPPPA---DDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHIDNF 72
           Q++ YRT K+    PA   DD LV++HR+QVTPT+VYF GPEVNVSNRVLR +R++IDNF
Sbjct: 332 QYERYRTSKEHPKSPAICLDDGLVYVHRVQVTPTRVYFSGPEVNVSNRVLRHYRDYIDNF 391

Query: 71  LRVSFVEEDWSKMYSADLSPRGA 3
           LRVSFV+E+W KMYS DLSPR A
Sbjct: 392 LRVSFVDEEWDKMYSTDLSPRVA 414


>gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]
          Length = 1101

 Score =  204 bits (518), Expect = 1e-50
 Identities = 93/144 (64%), Positives = 118/144 (81%), Gaps = 3/144 (2%)
 Frame = -1

Query: 425 RLLFKVCCLVQNGCLPGPKLDKNFYKLINPEKFDIAYLEQVLEKIYYMKECCYDPHSWLI 246
           +LLFKVC LVQ GCLPG KLD  F++ +NP ++ I Y+E  L+K+YY+KECCYDP +WL 
Sbjct: 274 KLLFKVCSLVQTGCLPGMKLDTEFFQCLNPRRYAIRYIEHALDKLYYIKECCYDPVAWLR 333

Query: 245 EQHQNYRTFKK-PRPPPA--DDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHIDN 75
           EQ++ Y+TF++ P+PP    DD LV+IHR+QVTPT+VYF GPEVN+SNRVLRQF  HIDN
Sbjct: 334 EQYRKYQTFEELPKPPTISLDDGLVYIHRVQVTPTRVYFAGPEVNMSNRVLRQFSAHIDN 393

Query: 74  FLRVSFVEEDWSKMYSADLSPRGA 3
           FLRVSF++E+W KMYS DLSP+ A
Sbjct: 394 FLRVSFIDEEWDKMYSTDLSPKVA 417


>gb|EPS70289.1| hypothetical protein M569_04468, partial [Genlisea aurea]
          Length = 1095

 Score =  181 bits (460), Expect = 7e-44
 Identities = 78/139 (56%), Positives = 109/139 (78%), Gaps = 1/139 (0%)
 Frame = -1

Query: 422 LLFKVCCLVQNGCLPGPKLDKNFYKLINPEKFDIAYLEQVLEKIYYMKECCYDPHSWLIE 243
           ++FK+C LVQ GC+PGP+LD NFY+++NP+  DI Y+E  LEKI+Y+KECCYDP  WL  
Sbjct: 271 IVFKICSLVQMGCIPGPELDANFYRMVNPQLVDIRYIEHALEKIFYLKECCYDPVKWLES 330

Query: 242 QHQNYRTFKKPRPP-PADDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHIDNFLR 66
           Q++ Y+T K   P    +  LV++ R+Q+TP++VYF GPE+NVSNRVLRQ+++ ID+FLR
Sbjct: 331 QYRRYQTSKPSSPTISLEGGLVYVRRVQITPSRVYFTGPEINVSNRVLRQYKDRIDDFLR 390

Query: 65  VSFVEEDWSKMYSADLSPR 9
           VSFV+EDW K++S  LS +
Sbjct: 391 VSFVDEDWDKLFSLTLSSK 409


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score =  180 bits (456), Expect = 2e-43
 Identities = 80/144 (55%), Positives = 110/144 (76%), Gaps = 3/144 (2%)
 Frame = -1

Query: 425 RLLFKVCCLVQNGCLPGPKLDKNFYKLINPEKFDIAYLEQVLEKIYYMKECCYDPHSWLI 246
           ++LFK+  LVQ+GC+PGP L+ NF++L++P++ ++A +EQ LEK+YY+KECCYDP  WL 
Sbjct: 271 KILFKISSLVQHGCIPGPALNVNFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLT 330

Query: 245 EQHQNYRTFKKPRPPPA---DDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHIDN 75
           EQ+  Y   ++P   P+   DD LV++ R+ VTP KVYF GPEVNVSNRVLR +   IDN
Sbjct: 331 EQYDGYLKGRQPPKSPSINLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDN 390

Query: 74  FLRVSFVEEDWSKMYSADLSPRGA 3
           FLRVSFV+E+W K+YS DL P+ +
Sbjct: 391 FLRVSFVDEEWEKLYSTDLLPKAS 414


>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1139

 Score =  179 bits (453), Expect = 5e-43
 Identities = 80/144 (55%), Positives = 109/144 (75%), Gaps = 3/144 (2%)
 Frame = -1

Query: 425 RLLFKVCCLVQNGCLPGPKLDKNFYKLINPEKFDIAYLEQVLEKIYYMKECCYDPHSWLI 246
           ++LFK+  LVQ+GC+PGP LD  F++L++P++ ++A +EQ LEK+YY+KECCYDP  WL 
Sbjct: 263 KILFKISSLVQHGCIPGPALDVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLT 322

Query: 245 EQHQNYRTFKKPRPPPA---DDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHIDN 75
           EQ+  Y   ++P   P+   DD LV++ R+ VTP KVYF GPEVNVSNRVLR +   IDN
Sbjct: 323 EQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDN 382

Query: 74  FLRVSFVEEDWSKMYSADLSPRGA 3
           FLRVSFV+E+W K+YS DL P+ +
Sbjct: 383 FLRVSFVDEEWEKLYSTDLLPKAS 406


>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1180

 Score =  179 bits (453), Expect = 5e-43
 Identities = 80/144 (55%), Positives = 109/144 (75%), Gaps = 3/144 (2%)
 Frame = -1

Query: 425 RLLFKVCCLVQNGCLPGPKLDKNFYKLINPEKFDIAYLEQVLEKIYYMKECCYDPHSWLI 246
           ++LFK+  LVQ+GC+PGP LD  F++L++P++ ++A +EQ LEK+YY+KECCYDP  WL 
Sbjct: 237 KILFKISSLVQHGCIPGPALDVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLT 296

Query: 245 EQHQNYRTFKKPRPPPA---DDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHIDN 75
           EQ+  Y   ++P   P+   DD LV++ R+ VTP KVYF GPEVNVSNRVLR +   IDN
Sbjct: 297 EQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDN 356

Query: 74  FLRVSFVEEDWSKMYSADLSPRGA 3
           FLRVSFV+E+W K+YS DL P+ +
Sbjct: 357 FLRVSFVDEEWEKLYSTDLLPKAS 380


>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
           tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
           tuberosum]
          Length = 1115

 Score =  177 bits (448), Expect = 2e-42
 Identities = 79/144 (54%), Positives = 109/144 (75%), Gaps = 3/144 (2%)
 Frame = -1

Query: 425 RLLFKVCCLVQNGCLPGPKLDKNFYKLINPEKFDIAYLEQVLEKIYYMKECCYDPHSWLI 246
           ++LFK+  LVQ+GC+PGP L+  F++L++P++ ++A +EQ LEK+YY+KECCYDP  WL 
Sbjct: 271 KILFKISSLVQHGCIPGPALNVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLT 330

Query: 245 EQHQNYRTFKKPRPPPA---DDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHIDN 75
           EQ+  Y   ++P   P+   DD LV++ R+ VTP KVYF GPEVNVSNRVLR +   IDN
Sbjct: 331 EQYDGYLKGRQPPKSPSINLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDN 390

Query: 74  FLRVSFVEEDWSKMYSADLSPRGA 3
           FLRVSFV+E+W K+YS DL P+ +
Sbjct: 391 FLRVSFVDEEWEKLYSTDLLPKAS 414


>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 841

 Score =  177 bits (448), Expect = 2e-42
 Identities = 79/144 (54%), Positives = 109/144 (75%), Gaps = 3/144 (2%)
 Frame = -1

Query: 425 RLLFKVCCLVQNGCLPGPKLDKNFYKLINPEKFDIAYLEQVLEKIYYMKECCYDPHSWLI 246
           ++LFK+  LVQ+GC+PGP L+  F++L++P++ ++A +EQ LEK+YY+KECCYDP  WL 
Sbjct: 271 KILFKISSLVQHGCIPGPALNVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLT 330

Query: 245 EQHQNYRTFKKPRPPPA---DDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHIDN 75
           EQ+  Y   ++P   P+   DD LV++ R+ VTP KVYF GPEVNVSNRVLR +   IDN
Sbjct: 331 EQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDN 390

Query: 74  FLRVSFVEEDWSKMYSADLSPRGA 3
           FLRVSFV+E+W K+YS DL P+ +
Sbjct: 391 FLRVSFVDEEWEKLYSTDLLPKAS 414


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  176 bits (445), Expect = 4e-42
 Identities = 80/145 (55%), Positives = 110/145 (75%), Gaps = 5/145 (3%)
 Frame = -1

Query: 422 LLFKVCCLVQNGCLPGPKLDKNFYKLINPEK--FDIAYLEQVLEKIYYMKECCYDPHSWL 249
           +LFK+  LVQNGC+ GP LD NFY+L++P +    I+ +E  L+K+Y++KECCY+P  WL
Sbjct: 284 ILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWL 343

Query: 248 IEQHQNYRTFKKPRPPPA---DDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHID 78
            +Q++ Y T +     PA   DD LV++HR+QVTP++VYF GPE+NVSNRVLR FR  ID
Sbjct: 344 TDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDID 403

Query: 77  NFLRVSFVEEDWSKMYSADLSPRGA 3
           NFLR+SF++ED  K++S DLSPRG+
Sbjct: 404 NFLRISFIDEDLDKIHSTDLSPRGS 428


>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1065

 Score =  176 bits (445), Expect = 4e-42
 Identities = 78/144 (54%), Positives = 109/144 (75%), Gaps = 3/144 (2%)
 Frame = -1

Query: 425 RLLFKVCCLVQNGCLPGPKLDKNFYKLINPEKFDIAYLEQVLEKIYYMKECCYDPHSWLI 246
           ++LFK+  LVQ+GC+PGP L+  F++L++P++ ++A +EQ LEK+YY+KECCYDP  WL 
Sbjct: 270 KILFKISSLVQHGCIPGPSLNVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLT 329

Query: 245 EQHQNYRTFKKPRPPPA---DDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHIDN 75
           EQ+  Y   ++P   P+   DD LV++ R+ VTP KVYF GPEVNVSNRVLR +   IDN
Sbjct: 330 EQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDN 389

Query: 74  FLRVSFVEEDWSKMYSADLSPRGA 3
           FLRVSFV+E+W K+YS +L P+ +
Sbjct: 390 FLRVSFVDEEWEKLYSTELLPKAS 413


>gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1021

 Score =  176 bits (445), Expect = 4e-42
 Identities = 78/144 (54%), Positives = 109/144 (75%), Gaps = 3/144 (2%)
 Frame = -1

Query: 425 RLLFKVCCLVQNGCLPGPKLDKNFYKLINPEKFDIAYLEQVLEKIYYMKECCYDPHSWLI 246
           ++LFK+  LVQ+GC+PGP L+  F++L++P++ ++A +EQ LEK+YY+KECCYDP  WL 
Sbjct: 119 KILFKISSLVQHGCIPGPSLNVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLT 178

Query: 245 EQHQNYRTFKKPRPPPA---DDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHIDN 75
           EQ+  Y   ++P   P+   DD LV++ R+ VTP KVYF GPEVNVSNRVLR +   IDN
Sbjct: 179 EQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDN 238

Query: 74  FLRVSFVEEDWSKMYSADLSPRGA 3
           FLRVSFV+E+W K+YS +L P+ +
Sbjct: 239 FLRVSFVDEEWEKLYSTELLPKAS 262


>gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tuberosum]
          Length = 1050

 Score =  176 bits (445), Expect = 4e-42
 Identities = 78/144 (54%), Positives = 109/144 (75%), Gaps = 3/144 (2%)
 Frame = -1

Query: 425 RLLFKVCCLVQNGCLPGPKLDKNFYKLINPEKFDIAYLEQVLEKIYYMKECCYDPHSWLI 246
           ++LFK+  LVQ+GC+PGP L+  F++L++P++ ++A +EQ LEK+YY+KECCYDP  WL 
Sbjct: 119 KILFKISSLVQHGCIPGPSLNVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLT 178

Query: 245 EQHQNYRTFKKPRPPPA---DDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHIDN 75
           EQ+  Y   ++P   P+   DD LV++ R+ VTP KVYF GPEVNVSNRVLR +   IDN
Sbjct: 179 EQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDN 238

Query: 74  FLRVSFVEEDWSKMYSADLSPRGA 3
           FLRVSFV+E+W K+YS +L P+ +
Sbjct: 239 FLRVSFVDEEWEKLYSTELLPKAS 262


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score =  175 bits (444), Expect = 5e-42
 Identities = 78/144 (54%), Positives = 109/144 (75%), Gaps = 3/144 (2%)
 Frame = -1

Query: 425 RLLFKVCCLVQNGCLPGPKLDKNFYKLINPEKFDIAYLEQVLEKIYYMKECCYDPHSWLI 246
           ++LFK+  LVQ+GC+PGP L+  F++L++P++ ++A +EQ LEK+YY+KECCYDP  WL 
Sbjct: 271 KILFKISSLVQHGCIPGPALNVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLT 330

Query: 245 EQHQNYRTFKKPRPPPA---DDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHIDN 75
           EQ+  Y   ++P   P+   DD LV++ R+ VTP KVYF GPEVNVSNRVLR +   IDN
Sbjct: 331 EQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDN 390

Query: 74  FLRVSFVEEDWSKMYSADLSPRGA 3
           FLRVSFV+E+W K+YS +L P+ +
Sbjct: 391 FLRVSFVDEEWEKLYSTELLPKAS 414


>gb|AAT38699.2| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  175 bits (444), Expect = 5e-42
 Identities = 78/144 (54%), Positives = 109/144 (75%), Gaps = 3/144 (2%)
 Frame = -1

Query: 425 RLLFKVCCLVQNGCLPGPKLDKNFYKLINPEKFDIAYLEQVLEKIYYMKECCYDPHSWLI 246
           ++LFK+  LVQ+GC+PGP L+  F++L++P++ ++A +EQ LEK+YY+KECCYDP  WL 
Sbjct: 119 KILFKISSLVQHGCIPGPALNVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLT 178

Query: 245 EQHQNYRTFKKPRPPPA---DDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHIDN 75
           EQ+  Y   ++P   P+   DD LV++ R+ VTP KVYF GPEVNVSNRVLR +   IDN
Sbjct: 179 EQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDN 238

Query: 74  FLRVSFVEEDWSKMYSADLSPRGA 3
           FLRVSFV+E+W K+YS +L P+ +
Sbjct: 239 FLRVSFVDEEWEKLYSTELLPKAS 262


>gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  175 bits (444), Expect = 5e-42
 Identities = 78/144 (54%), Positives = 109/144 (75%), Gaps = 3/144 (2%)
 Frame = -1

Query: 425 RLLFKVCCLVQNGCLPGPKLDKNFYKLINPEKFDIAYLEQVLEKIYYMKECCYDPHSWLI 246
           ++LFK+  LVQ+GC+PGP L+  F++L++P++ ++A +EQ LEK+YY+KECCYDP  WL 
Sbjct: 119 KILFKISSLVQHGCIPGPALNVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLT 178

Query: 245 EQHQNYRTFKKPRPPPA---DDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHIDN 75
           EQ+  Y   ++P   P+   DD LV++ R+ VTP KVYF GPEVNVSNRVLR +   IDN
Sbjct: 179 EQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDN 238

Query: 74  FLRVSFVEEDWSKMYSADLSPRGA 3
           FLRVSFV+E+W K+YS +L P+ +
Sbjct: 239 FLRVSFVDEEWEKLYSTELLPKAS 262


>gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 935

 Score =  175 bits (443), Expect = 7e-42
 Identities = 80/146 (54%), Positives = 110/146 (75%), Gaps = 5/146 (3%)
 Frame = -1

Query: 425 RLLFKVCCLVQNGCLPGPKLDKNFYKLINPEKFDIAYLEQVLEKIYYMKECCYDPHSWLI 246
           ++LFK+  LVQ+GC+PGP L+  F++L++P++ ++A +EQ LEK+YY+KECCYDP  WL 
Sbjct: 271 KILFKISSLVQHGCIPGPALNVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLT 330

Query: 245 EQHQNYRTFKKPRPPPA-----DDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHI 81
           EQ+  Y  FK  +PP +     DD LV++ R+ VTP KVYF GPEVNVSNRVLR +   I
Sbjct: 331 EQYDGY--FKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDI 388

Query: 80  DNFLRVSFVEEDWSKMYSADLSPRGA 3
           DNFLRVSFV+E+W K+YS +L P+ +
Sbjct: 389 DNFLRVSFVDEEWEKLYSTELLPKAS 414


>gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solanum demissum]
          Length = 1137

 Score =  175 bits (443), Expect = 7e-42
 Identities = 80/146 (54%), Positives = 110/146 (75%), Gaps = 5/146 (3%)
 Frame = -1

Query: 425 RLLFKVCCLVQNGCLPGPKLDKNFYKLINPEKFDIAYLEQVLEKIYYMKECCYDPHSWLI 246
           ++LFK+  LVQ+GC+PGP L+  F++L++P++ ++A +EQ LEK+YY+KECCYDP  WL 
Sbjct: 307 KILFKISSLVQHGCIPGPALNVYFFRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLT 366

Query: 245 EQHQNYRTFKKPRPPPA-----DDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHI 81
           EQ+  Y  FK  +PP +     DD LV++ R+ VTP KVYF GPEVNVSNRVLR +   I
Sbjct: 367 EQYDGY--FKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDI 424

Query: 80  DNFLRVSFVEEDWSKMYSADLSPRGA 3
           DNFLRVSFV+E+W K+YS +L P+ +
Sbjct: 425 DNFLRVSFVDEEWEKLYSTELLPKAS 450


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  174 bits (440), Expect = 1e-41
 Identities = 77/141 (54%), Positives = 106/141 (75%), Gaps = 3/141 (2%)
 Frame = -1

Query: 422 LLFKVCCLVQNGCLPGPKLDKNFYKLINPEKFDIAYLEQVLEKIYYMKECCYDPHSWLIE 243
           +LFK+  LVQNGC+PGP LD NFY+L+NP + D  Y++  LEK+YY+KECC++P  WL+E
Sbjct: 281 ILFKINLLVQNGCIPGPALDANFYRLVNPCRIDKVYIDHALEKLYYLKECCFEPSKWLLE 340

Query: 242 QHQNYRTFKKPRPPPA---DDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHIDNF 72
           Q++ Y   KK    P    DD LV++ R+Q+TP++VYF GPE+NVSNRVLR F + IDNF
Sbjct: 341 QYKGYIASKKNPGSPVISLDDGLVNVRRVQITPSRVYFCGPEINVSNRVLRHFHDDIDNF 400

Query: 71  LRVSFVEEDWSKMYSADLSPR 9
           LR++FV+E+  K++S DL  R
Sbjct: 401 LRITFVDEELEKIHSTDLLTR 421


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
           gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
           [Solanum lycopersicum]
          Length = 1114

 Score =  174 bits (440), Expect = 1e-41
 Identities = 78/144 (54%), Positives = 107/144 (74%), Gaps = 3/144 (2%)
 Frame = -1

Query: 425 RLLFKVCCLVQNGCLPGPKLDKNFYKLINPEKFDIAYLEQVLEKIYYMKECCYDPHSWLI 246
           ++LFK+  LVQ+GC+PGP L+  F++L++P + ++A +E  LEK+YY+KECCYDP  WL 
Sbjct: 271 KILFKISSLVQHGCIPGPALNVYFFRLVDPRRRNVACIEHALEKLYYIKECCYDPVRWLT 330

Query: 245 EQHQNYRTFKKPRPPPA---DDDLVHIHRMQVTPTKVYFYGPEVNVSNRVLRQFRNHIDN 75
           EQ+  Y   ++P   P+   DD LV++ R+ VTP KVYF GPEVNVSNRVLR +   IDN
Sbjct: 331 EQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDN 390

Query: 74  FLRVSFVEEDWSKMYSADLSPRGA 3
           FLRVSFV+E+W K+YS DL P+ +
Sbjct: 391 FLRVSFVDEEWEKLYSTDLLPKAS 414