BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00022573
         (1565 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]   774   0.0  
gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus...   650   0.0  
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    630   e-178
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     630   e-178
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     625   e-176
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    624   e-176
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...   622   e-175
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   620   e-175
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   608   e-171
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   604   e-170
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco...   602   e-169
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   593   e-167
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca...   588   e-165
ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   587   e-165
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   587   e-165
gb|EPS62146.1| hypothetical protein M569_12646, partial [Genlise...   581   e-163
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...   578   e-162
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   576   e-161
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   573   e-161
gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]       569   e-159

>gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]
          Length = 1195

 Score =  774 bits (1998), Expect = 0.0
 Identities = 376/459 (81%), Positives = 418/459 (91%), Gaps = 2/459 (0%)
 Frame = -1

Query: 1373 KIGDNDMIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFEINTE 1194
            ++GDNDMIVTQIS+GGL+  ++AK+L DYLED VGLVWRCRVKTSSTPQDSYPN+EI+TE
Sbjct: 3    QVGDNDMIVTQISIGGLEGYVTAKLLSDYLEDNVGLVWRCRVKTSSTPQDSYPNYEIDTE 62

Query: 1193 SVQRKTEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRLSEMR 1014
            +VQRK EYEKVEPHAFVHFA+A+S+A A++LS +G L+LG  I+KV  GPQNPYRL E R
Sbjct: 63   NVQRKGEYEKVEPHAFVHFAVAQSSASAMKLSGAGDLVLGRHILKVGLGPQNPYRLRERR 122

Query: 1013 RTTTPFKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAFSIRG 834
            RTTTP+K+PGV++EIG ++SRDEFVVGWRGP+TG DFLVDPFNGTCQI FT+DTAFSI+G
Sbjct: 123  RTTTPYKVPGVTVEIGAMKSRDEFVVGWRGPRTGLDFLVDPFNGTCQILFTKDTAFSIKG 182

Query: 833  EARPAVIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEESVPYD 654
            EARPAVIKCNFK+EFVPREIN+IKRYKDF+S+V+L QLAS P LYYRTADDDIEESVP+D
Sbjct: 183  EARPAVIKCNFKMEFVPREINQIKRYKDFSSVVVLFQLASSPLLYYRTADDDIEESVPFD 242

Query: 653  LLDDDDPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPV--VDIER 480
            LLDDDDPWIRTTDFVPSGAIGRSNTYRISVRPR+  QLEKALG+LQ RRVP       ER
Sbjct: 243  LLDDDDPWIRTTDFVPSGAIGRSNTYRISVRPRHLSQLEKALGYLQNRRVPVENGSPQER 302

Query: 479  LRVQDEPDFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQN 300
            LRVQDEPDFGVPM DPFFCFQYKEGL+FKVMFMVNAVVHKGIINQHQ S  FFDLLR Q 
Sbjct: 303  LRVQDEPDFGVPMADPFFCFQYKEGLNFKVMFMVNAVVHKGIINQHQTSKQFFDLLRSQP 362

Query: 299  EEFNLVALKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSK 120
            EE NLVALKHIYSYKRP YDA RALD+V KWL+KNPKLLQRP+QMDDIVEVRRL+ITPSK
Sbjct: 363  EELNLVALKHIYSYKRPVYDAYRALDSVTKWLIKNPKLLQRPDQMDDIVEVRRLVITPSK 422

Query: 119  AYCLPPEVELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
            AYCLPPEVELSNRVLR Y++ISDRFLRVTFMDEAMQTLN
Sbjct: 423  AYCLPPEVELSNRVLRNYKNISDRFLRVTFMDEAMQTLN 461


>gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus guttatus]
          Length = 1196

 Score =  650 bits (1677), Expect = 0.0
 Identities = 309/463 (66%), Positives = 381/463 (82%), Gaps = 3/463 (0%)
 Frame = -1

Query: 1382 MGYKIGDNDMIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFEI 1203
            MG +I D +MIVTQIS+GGL  N++AKML+DY ED +GLVWRCR+KTSSTP +SYPN+EI
Sbjct: 1    MGSEISDREMIVTQISVGGLGSNVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEI 60

Query: 1202 NTESVQRKTEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRLS 1023
            + +S ++  +Y K++P+AFVHF +A+SA +A+E +  G L    +++KVS GPQNPYRLS
Sbjct: 61   DIDSAKQSDDYVKIQPYAFVHFVVAESANKAVEAASRGDLRFAGKLLKVSLGPQNPYRLS 120

Query: 1022 EMRRTTTPFKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAFS 843
            E RRTTTP+K+    +EIG LRSR+E VVGWRGP++G DFLVDPF+GTC++H  RDTAF 
Sbjct: 121  ERRRTTTPYKLSDAFVEIGSLRSREELVVGWRGPRSGVDFLVDPFSGTCKLHIKRDTAFC 180

Query: 842  IRGEARPAVIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEESV 663
             +GEAR A+IKC+F+IEF PREI EIK Y+DF+S++IL+QLAS P +YYRTADDDIEE  
Sbjct: 181  FKGEARSAIIKCDFRIEFFPREIIEIKHYRDFSSLIILIQLASSPLIYYRTADDDIEEPA 240

Query: 662  PYDLLDDDDPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPVVD-- 489
              DLLDDDDPWIRTTDF   GA GR NTYRISVRP N   L KAL +L++RRV PV+D  
Sbjct: 241  TCDLLDDDDPWIRTTDFTSGGAFGRCNTYRISVRPHNGPHLLKALDYLRKRRV-PVLDER 299

Query: 488  -IERLRVQDEPDFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLL 312
              +RL VQDEPDFG+P+ DPF C QYKEG+SFKVMF++NAV+HKGIINQHQ+S+   D+ 
Sbjct: 300  TRQRLVVQDEPDFGMPVLDPFLCIQYKEGISFKVMFLLNAVMHKGIINQHQISEQLLDMF 359

Query: 311  RRQNEEFNLVALKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLII 132
            RRQ E+ N VALKH+ SYKRP YDA +A++ VQ+WL+KNPKLL+RP  MDDIVEVRRLII
Sbjct: 360  RRQPEDVNTVALKHMCSYKRPVYDAFKAVETVQRWLLKNPKLLERPRGMDDIVEVRRLII 419

Query: 131  TPSKAYCLPPEVELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
            TP+KAYCLPPEVELSNRVLR Y++++DRFLRVTF DEAM TLN
Sbjct: 420  TPAKAYCLPPEVELSNRVLRHYKAVADRFLRVTFTDEAMSTLN 462


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  630 bits (1624), Expect = e-178
 Identities = 307/462 (66%), Positives = 373/462 (80%), Gaps = 2/462 (0%)
 Frame = -1

Query: 1382 MGYKIGDNDMIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFEI 1203
            MG +  + D++VTQIS+GG D +++AKML +YLE++VG VWRCR+K S+TP DSYP ++I
Sbjct: 1    MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDI 60

Query: 1202 NTESVQRKTEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRLS 1023
            + E V R  +YEKV PHAFVHFA ++SA  AL  +    L+LG + + VS GP+NPYRL+
Sbjct: 61   DAERVHRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120

Query: 1022 EMRRTTTPFKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAFS 843
            + RRTT PFK   VS+E+GVL S+D+FVVGWRGP+TG DFLVDPFNGTC+I FT+DTAFS
Sbjct: 121  QRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTAFS 180

Query: 842  IRGEARPAVIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEESV 663
             RGEAR A+IKCNFKIEF+ REINEIK+ KDFTS+VIL QLAS P ++YRTADDDIEESV
Sbjct: 181  FRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILFQLASSPLVFYRTADDDIEESV 240

Query: 662  PYDLLDDDDPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPVVDIE 483
             +DLLDDDD WIRTTD   SGAIGR NTYRIS+RPRN    EKA+ +   RRVP V    
Sbjct: 241  AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFRRVPMVEMCN 300

Query: 482  R--LRVQDEPDFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLLR 309
            R  LRV+DEPDFGV M DPFFCFQ  EG+SFKVMF+VNAV+HKGI+NQHQM++ FF LLR
Sbjct: 301  RKMLRVKDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359

Query: 308  RQNEEFNLVALKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLIIT 129
             + EE NL ALKH++SYK P  DA++ L  +QKWL+KNPKLL+R  ++DDIVEVRRL+IT
Sbjct: 360  SRQEEVNLAALKHMFSYKWPVNDAIQKLVGIQKWLLKNPKLLERTGELDDIVEVRRLVIT 419

Query: 128  PSKAYCLPPEVELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
            P+KAYCLPP VELSNRVLR Y+ ++DRFLRVTFMDE M+ LN
Sbjct: 420  PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLN 461


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  630 bits (1624), Expect = e-178
 Identities = 308/462 (66%), Positives = 372/462 (80%), Gaps = 2/462 (0%)
 Frame = -1

Query: 1382 MGYKIGDNDMIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFEI 1203
            MG +  + D++VTQIS+GG D +++AKML +YLE++VG VWRCR+K SSTP DSYP F++
Sbjct: 1    MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTFDV 60

Query: 1202 NTESVQRKTEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRLS 1023
            + E VQR  +YEKV PHAFVHFA ++SA  AL  +    L+LG + + VS GP+NPYRL+
Sbjct: 61   DAERVQRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120

Query: 1022 EMRRTTTPFKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAFS 843
            + RRTT PFK   VSIE+GVL S+D+FVVGWRGP+TG DFLVDPFNG C+I FT+DTAFS
Sbjct: 121  QRRRTTMPFKFSDVSIEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGACKILFTKDTAFS 180

Query: 842  IRGEARPAVIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEESV 663
             RGEAR A+IKCNFKIEF+ REINEIK+ KDFTS+VILLQLAS P ++YRTADDDIEESV
Sbjct: 181  FRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESV 240

Query: 662  PYDLLDDDDPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPVVDIE 483
             +DLLDDDD WIRTTD   SGAIGR NTYRIS+RPRN    EKA+ +    RVP V    
Sbjct: 241  AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300

Query: 482  R--LRVQDEPDFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLLR 309
            R  LRV+DEPDFGV M DPFFCFQ  EG+SFKVMF+VNAV+HKGI+NQHQM++ FF LLR
Sbjct: 301  RKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359

Query: 308  RQNEEFNLVALKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLIIT 129
               EE NL ALKH++SYK P  DA++ L  ++KWL+KNPKLL+R  ++DDIVEVRRL+IT
Sbjct: 360  SHQEEVNLAALKHMFSYKWPVNDAIQKLVGIRKWLLKNPKLLERTGELDDIVEVRRLVIT 419

Query: 128  PSKAYCLPPEVELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
            P+KAYCLPP VELSNRVLR Y+ ++DRFLRVTFMDE M+ LN
Sbjct: 420  PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLN 461


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  625 bits (1611), Expect = e-176
 Identities = 305/462 (66%), Positives = 370/462 (80%), Gaps = 2/462 (0%)
 Frame = -1

Query: 1382 MGYKIGDNDMIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFEI 1203
            MG +  + +++VTQIS+GG D +++AKML +YLE++VG VWRCR+K SSTP DSYP ++I
Sbjct: 1    MGSEGCEKELVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTYDI 60

Query: 1202 NTESVQRKTEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRLS 1023
            + E VQR   YEKV PHAFVHFA ++SA  AL  +    L+LG + + VS GP+NPYRL+
Sbjct: 61   DAEKVQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120

Query: 1022 EMRRTTTPFKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAFS 843
            + RRTT PFK   VS+E+GVL S+D+FVVGWRGP+TG DFLVDPFNGTC+I FT+DTAFS
Sbjct: 121  QRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTAFS 180

Query: 842  IRGEARPAVIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEESV 663
             RGEAR A+IKCNFKIEF+ REINEIK+ KDFTS+VIL QLAS P ++YRTADDDIEESV
Sbjct: 181  FRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILFQLASSPLVFYRTADDDIEESV 240

Query: 662  PYDLLDDDDPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPVVDIE 483
             +DLLDDDD WIRTTD   SGAIGR NTYRIS+RPRN    EKA+ +   RRVP V    
Sbjct: 241  AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFRRVPMVEMCN 300

Query: 482  R--LRVQDEPDFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLLR 309
            R  LRV+DEPDFGV M DPFFCFQ  EG+SF+V+F+VNAV+HKGI+NQHQM++ FF LLR
Sbjct: 301  RKMLRVKDEPDFGVSMSDPFFCFQ-NEGISFRVLFLVNAVLHKGIVNQHQMANEFFYLLR 359

Query: 308  RQNEEFNLVALKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLIIT 129
               EE N  ALKH++SYK P  DA++ L  +QKWL+KNPKLL R  ++DDIVEVRRL+IT
Sbjct: 360  SHQEEVNSAALKHMFSYKWPVNDAIQKLAGIQKWLLKNPKLLDRTGELDDIVEVRRLVIT 419

Query: 128  PSKAYCLPPEVELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
            P+KAYCLPP VELSNRVLR Y+ ++DRFLRVTFMDE M+ LN
Sbjct: 420  PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLN 461


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  624 bits (1610), Expect = e-176
 Identities = 306/462 (66%), Positives = 369/462 (79%), Gaps = 2/462 (0%)
 Frame = -1

Query: 1382 MGYKIGDNDMIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFEI 1203
            MG +  + +++VTQIS GG D +++AKML +YLE++VG VWRCR+K SSTP DSYP ++I
Sbjct: 1    MGSEGSEKELVVTQISGGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTYDI 60

Query: 1202 NTESVQRKTEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRLS 1023
            + E VQR   YEKV PHAFVHFA ++SA  AL  +    L+LG + + VS GP+NPYRL+
Sbjct: 61   DAEKVQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120

Query: 1022 EMRRTTTPFKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAFS 843
            + RRTT PFK   VS+E+GVL S+D+FVVGWRGP+TG DF VDPFNGTC+I FT+DTAFS
Sbjct: 121  QRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGTCKILFTKDTAFS 180

Query: 842  IRGEARPAVIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEESV 663
             RGEAR A+IKCNFKIEF+ REINEIK+ KDFTS+VILLQLAS P ++YRTADDDIEESV
Sbjct: 181  FRGEARHAIIKCNFKIEFMVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESV 240

Query: 662  PYDLLDDDDPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPVVDIE 483
             +DLLDDDD WIRTTD   SGAIGR NTYRIS+RPRN    EKA+ +    RVP V    
Sbjct: 241  AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300

Query: 482  R--LRVQDEPDFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLLR 309
            R  LRV+DEPDFGV M DPFFCFQ  EG+SFKVMF+VNAV+HKGI+NQHQM++ FF LLR
Sbjct: 301  RKMLRVKDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359

Query: 308  RQNEEFNLVALKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLIIT 129
             + EE N  ALKH++SYK P  DA++ L  +QKWL+KNPKLL R  ++DDIVEVRRL+IT
Sbjct: 360  SRQEEVNSAALKHMFSYKWPVNDAIQKLVGIQKWLLKNPKLLDRTGELDDIVEVRRLVIT 419

Query: 128  PSKAYCLPPEVELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
            P+KAYCLPP VELSNRVLR Y+ ++DRFLRVTFMDE M+ LN
Sbjct: 420  PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLN 461


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score =  622 bits (1604), Expect = e-175
 Identities = 302/462 (65%), Positives = 370/462 (80%), Gaps = 2/462 (0%)
 Frame = -1

Query: 1382 MGYKIGDNDMIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFEI 1203
            MG +  + D++VTQIS+GG D +++AKML +YLE++VG VWRCR+K S+TP DSYP +++
Sbjct: 1    MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDV 60

Query: 1202 NTESVQRKTEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRLS 1023
            +   V R  +YEKV PHAFVHFA ++SA  AL  +    L+LG + + VS GP+NPYRL+
Sbjct: 61   DAARVHRMKDYEKVVPHAFVHFASSESAKYALAAAGGNGLILGKKPLIVSLGPENPYRLN 120

Query: 1022 EMRRTTTPFKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAFS 843
            + RRTT PFK   VS+E+GVL S+D+FVVGWRGP+TG DF VDPFNG C+I FT+DTAFS
Sbjct: 121  QRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGACKILFTKDTAFS 180

Query: 842  IRGEARPAVIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEESV 663
             RGEA+ A+IKCNFKIEF+ REINEIK++KDFTS+VILLQLAS P ++YRTADDDIEESV
Sbjct: 181  FRGEAKHAIIKCNFKIEFMVREINEIKKFKDFTSLVILLQLASSPLVFYRTADDDIEESV 240

Query: 662  PYDLLDDDDPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPVVDIE 483
             +DLLDDDD WIRTTD   SGAIGR NTYRIS+RPRN    EKA+ +    RVP V    
Sbjct: 241  AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300

Query: 482  R--LRVQDEPDFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLLR 309
            R  LRV+DEPDFGV M DPFFCFQ  EG+SFKVMF+VNAV+HKGI+NQHQM++ FF LLR
Sbjct: 301  RKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359

Query: 308  RQNEEFNLVALKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLIIT 129
               EE NL ALKH++SYK P  DA++ L  +QKWL+KNPKLL+R  ++DDIVEVRRL+IT
Sbjct: 360  SHQEEVNLAALKHMFSYKWPVNDAIQKLVGIQKWLLKNPKLLERTGELDDIVEVRRLVIT 419

Query: 128  PSKAYCLPPEVELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
            P+KAYCLPP VELSNRVLR Y+ ++DRFLRVTFMDE M+ LN
Sbjct: 420  PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLN 461


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  620 bits (1599), Expect = e-175
 Identities = 303/462 (65%), Positives = 367/462 (79%), Gaps = 2/462 (0%)
 Frame = -1

Query: 1382 MGYKIGDNDMIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFEI 1203
            MG +  + +++VTQIS+GG D +++AKML +YLE++VG VWRCR+K SSTP DSYP ++I
Sbjct: 1    MGSEGSEKELVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTYDI 60

Query: 1202 NTESVQRKTEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRLS 1023
            + E VQR   YEKV PHAFVHFA ++SA  AL  +    L+LG + + VS GP+NPYRL+
Sbjct: 61   DAERVQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELVLGKKPLIVSLGPENPYRLN 120

Query: 1022 EMRRTTTPFKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAFS 843
            + RRTT PFK   VS+E+GVL S+ +FVVGWRGP+TG DFLVDPFNGTC+I FT+DT FS
Sbjct: 121  QRRRTTMPFKFSDVSVEMGVLVSKHDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTVFS 180

Query: 842  IRGEARPAVIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEESV 663
             RGEAR A+IKCNFKIEF+ REINEIK+ KDF S+VILLQLAS P ++YRTADDDIEESV
Sbjct: 181  FRGEARHAIIKCNFKIEFLVREINEIKKCKDFMSLVILLQLASSPLVFYRTADDDIEESV 240

Query: 662  PYDLLDDDDPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPVVDIE 483
             +DLLDDDD WIRTTD   SGAIGR NTYRIS+RPRN    EKA+ +    RVP V    
Sbjct: 241  AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300

Query: 482  R--LRVQDEPDFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLLR 309
            R  LRV+DEPDFGV M DPFFCFQ  EG+SFKV+F+ NAV+HKGI+NQHQM + FF LLR
Sbjct: 301  RKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVLFLANAVLHKGIVNQHQMINEFFYLLR 359

Query: 308  RQNEEFNLVALKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLIIT 129
               EE NL ALKH++SYK P  DA++ L  +QKWL+KNPKLL+R  ++DDIVEVRRL+IT
Sbjct: 360  SHQEEVNLAALKHMFSYKWPVNDAIQKLAGIQKWLLKNPKLLERTGELDDIVEVRRLVIT 419

Query: 128  PSKAYCLPPEVELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
            P+KAYCLPP VELSNRVLR Y+ ++DRFLRVTFMDE M+ LN
Sbjct: 420  PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLN 461


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
            tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
            tuberosum]
          Length = 1198

 Score =  608 bits (1569), Expect = e-171
 Identities = 296/462 (64%), Positives = 362/462 (78%), Gaps = 2/462 (0%)
 Frame = -1

Query: 1382 MGYKIGDNDMIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFEI 1203
            MG +  + D++VTQIS+GG   +++AKML + LED+VG VWRCR+KTSSTP DSYP ++I
Sbjct: 1    MGSEGSEKDLVVTQISVGGFSNDVNAKMLSECLEDQVGQVWRCRLKTSSTPPDSYPTYDI 60

Query: 1202 NTESVQRKTEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRLS 1023
            + E+V+R   Y KVEPHAFVHFA ++SA  AL  +    L L  + +KVS GP+NP+ ++
Sbjct: 61   DVENVRRMNNYIKVEPHAFVHFASSESAQNALAAARRDELFLEEKPLKVSLGPENPFNMN 120

Query: 1022 EMRRTTTPFKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAFS 843
            + RRT  PFK   V +EIGVL S D+FVVGWRGP +G +FLVDPFNGTC+I FTRDTAF 
Sbjct: 121  KRRRTIMPFKFSDVGVEIGVLVSNDDFVVGWRGPHSGVNFLVDPFNGTCKILFTRDTAFC 180

Query: 842  IRGEARPAVIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEESV 663
             +GE + AVIKCNFKIEF+ REINEI   KDF S+V+LLQL S P ++YRTADDDIEESV
Sbjct: 181  FKGEGKHAVIKCNFKIEFLLREINEINECKDFASLVLLLQLTSSPLVFYRTADDDIEESV 240

Query: 662  PYDLLDDDDPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPVVDIE 483
             +DLLDDDD WIRTTD   SGAIGR NTYRIS+RPRN   L+KA+ + +E RVP V    
Sbjct: 241  AFDLLDDDDQWIRTTDITCSGAIGRFNTYRISIRPRNGPSLKKAMNYFRESRVPVVEQGN 300

Query: 482  R--LRVQDEPDFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLLR 309
            R  LRV+DEPDFGV + +PFFCFQ  EG+SFKV+F+VNAV+ KGI+NQHQM+  FF LLR
Sbjct: 301  RQMLRVRDEPDFGVSLSEPFFCFQNHEGISFKVLFLVNAVLQKGIVNQHQMTAEFFSLLR 360

Query: 308  RQNEEFNLVALKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLIIT 129
            +  E  NL ALKHI+SYKRP  DA++ L +VQKWL KNP LL+R  Q+DD+VEVRRL+IT
Sbjct: 361  KHQEGVNLAALKHIFSYKRPVNDAIQKLASVQKWLFKNPNLLERTGQLDDVVEVRRLVIT 420

Query: 128  PSKAYCLPPEVELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
            P+KAYCLPP VELSNRVLRKY+ +SDRFLRVTFMDE M+ LN
Sbjct: 421  PTKAYCLPPTVELSNRVLRKYKHVSDRFLRVTFMDEGMRNLN 462


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  604 bits (1557), Expect = e-170
 Identities = 287/457 (62%), Positives = 367/457 (80%), Gaps = 3/457 (0%)
 Frame = -1

Query: 1364 DNDMIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFEI-NTESV 1188
            + DM+VTQIS+GG D+ ++A  L  YLED +G V RCR+KTSSTP +SYP+FEI +T  +
Sbjct: 7    EKDMVVTQISIGGFDQYVTATELTYYLEDTIGSVDRCRLKTSSTPPESYPDFEIIDTAKI 66

Query: 1187 QRKTEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRLSEMRRT 1008
            +R  +Y+KVEPHAFVHF   ++A  AL+ +    L L  + +KVS GP+ P+ L++ RRT
Sbjct: 67   ERTEDYKKVEPHAFVHFVSPEAATWALDAAGKSELFLHGKPLKVSLGPETPFHLNQRRRT 126

Query: 1007 TTPFKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAFSIRGEA 828
            T PFK P V +EIG+L SRDE+  GWRGP +G DFLVDPF+GTC+  FT+DTAFS +G  
Sbjct: 127  TFPFKFPDVRLEIGILVSRDEYFAGWRGPSSGVDFLVDPFDGTCKFLFTKDTAFSFKGMP 186

Query: 827  RPAVIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEESVPYDLL 648
            + AVIKCNFK+EF+ REINE+++ +D +S+++LLQL+S P +YYRTADDDIEE+VP+DLL
Sbjct: 187  KHAVIKCNFKVEFLVREINEVRQRRDMSSLILLLQLSSSPFVYYRTADDDIEETVPFDLL 246

Query: 647  DDDDPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPVVDIER--LR 474
            DDDDPWIRTTDF  SGAIGR N+YRIS+ PR   +L+KA+ +L+ RRV  + D  +  LR
Sbjct: 247  DDDDPWIRTTDFTVSGAIGRCNSYRISIPPRYGAKLKKAMDYLRARRVNVLEDSPKWQLR 306

Query: 473  VQDEPDFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEE 294
            V+DEPDFG+PM DPFFC Q+KEG+ F+VMF+VNAV+HKGIINQHQ+SD FFDLLR Q ++
Sbjct: 307  VRDEPDFGLPMSDPFFCIQHKEGIDFRVMFLVNAVMHKGIINQHQLSDKFFDLLRSQQKD 366

Query: 293  FNLVALKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAY 114
             N+ ALKHI SY+ P +DA + L  V KWL+KNPKLL+ P+++DDIVEVRRL+ITPSKAY
Sbjct: 367  INIAALKHICSYRHPVFDAYQRLKLVHKWLLKNPKLLKSPKELDDIVEVRRLVITPSKAY 426

Query: 113  CLPPEVELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
            CLPPEVELSNRVLR Y+ +SDRFLRVTFMDE MQT+N
Sbjct: 427  CLPPEVELSNRVLRNYKEVSDRFLRVTFMDEGMQTIN 463


>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
            gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
            6 [Solanum lycopersicum]
          Length = 1197

 Score =  602 bits (1553), Expect = e-169
 Identities = 293/461 (63%), Positives = 361/461 (78%), Gaps = 1/461 (0%)
 Frame = -1

Query: 1382 MGYKIGDNDMIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFEI 1203
            MG +  D +++VTQIS+GG   +++AKML +YLE++VG VWRCR+KTSSTP DSYP ++I
Sbjct: 1    MGSEDSDMNIVVTQISVGGFSNDVNAKMLSEYLEEQVGQVWRCRLKTSSTPPDSYPTYDI 60

Query: 1202 NTESVQRKTEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRLS 1023
            + E V+R   Y KVEPHAFVHFA ++SA  AL  +    L L  + +KVS GP+N + ++
Sbjct: 61   DVEKVRRMNNYIKVEPHAFVHFASSESAQNALAAARRDELFLEEKPLKVSLGPENTFNMN 120

Query: 1022 EMRRTTTPFKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAFS 843
            E RRT  P+K   V +EIGVL S D+FVVGWRGP +G +FLVDPFNG C+I FTRDTAF 
Sbjct: 121  ERRRTFMPYKFSDVGVEIGVLVSNDDFVVGWRGPHSGVNFLVDPFNGKCKILFTRDTAFC 180

Query: 842  IRGEARPAVIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEESV 663
             +GE + AVIKCNFKIEF+ REINEI   KDF+S+V+LLQLAS P ++YRTADDDIEESV
Sbjct: 181  FKGEGKHAVIKCNFKIEFLLREINEINECKDFSSLVLLLQLASSPLVFYRTADDDIEESV 240

Query: 662  PYDLLDDDDPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPVVDIE 483
             +DLLDDDD WIRTTD   SGAIGR NTYR+S+RPRN    +KA+ + +E RVP V   E
Sbjct: 241  AFDLLDDDDQWIRTTDITFSGAIGRFNTYRVSIRPRNGPSFKKAMNYFRESRVPVVEQGE 300

Query: 482  R-LRVQDEPDFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRR 306
            + LRV++EPDFG  + +PFFCFQ  EG+SFKV+F+VNAV+HKGI+NQHQM+  FF LLR+
Sbjct: 301  QMLRVRNEPDFGESVSEPFFCFQNHEGISFKVLFLVNAVLHKGIVNQHQMTAEFFSLLRK 360

Query: 305  QNEEFNLVALKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITP 126
              E  NL ALKHI+SYKRP  DA+R L +VQKWL  NP LL+R  Q+DD+VEVRRL+ITP
Sbjct: 361  HQEGVNLAALKHIFSYKRPVNDAIRKLASVQKWLFNNPNLLERTGQLDDVVEVRRLVITP 420

Query: 125  SKAYCLPPEVELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
            +KAYCLPP VELSNRVLRKY+ ISDRFLRVTFMDE M+ LN
Sbjct: 421  TKAYCLPPTVELSNRVLRKYKHISDRFLRVTFMDEGMRNLN 461


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1198

 Score =  593 bits (1529), Expect = e-167
 Identities = 276/453 (60%), Positives = 363/453 (80%), Gaps = 1/453 (0%)
 Frame = -1

Query: 1358 DMIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFEI-NTESVQR 1182
            + +VTQ+SLGG D +++AK L++YLE ++GLVWRCR+KTS TP +SYPNFEI +   + R
Sbjct: 9    ETVVTQVSLGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEITDITKITR 68

Query: 1181 KTEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRLSEMRRTTT 1002
              +Y +VEPHAFVHFAL +SA  A++ ++   L L ++ +K S GP+NP+ L++ RR TT
Sbjct: 69   TEDYRRVEPHAFVHFALPQSATCAIDAADRCELFLNNKGLKASLGPENPFTLNQRRRKTT 128

Query: 1001 PFKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAFSIRGEARP 822
            PFK+ GV +EIG L SRDEF VGWRGP TG DFLVDPF+GTC+  F+R+TAFS +  A  
Sbjct: 129  PFKLSGVGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTAFSFKSTAEH 188

Query: 821  AVIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEESVPYDLLDD 642
            AVIKC+FK+EF+ R+INEIK+Y + + +V+LLQLAS P+++YRTADDDIE SVP+DLLDD
Sbjct: 189  AVIKCDFKVEFLVRDINEIKQYTETSCLVLLLQLASAPRVWYRTADDDIEVSVPFDLLDD 248

Query: 641  DDPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPVVDIERLRVQDE 462
            DDPWIRTTDF  SGAIGR ++YR+S+ PR+  +L KA+ FL+ERRV        +R++DE
Sbjct: 249  DDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEEYLRRPIRIRDE 308

Query: 461  PDFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLV 282
            PDFG+PM DPFFC  +KEG++F V+F+VNAV+HKGI NQHQ+S++FFDLLR Q  E N+ 
Sbjct: 309  PDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQPTEVNVA 368

Query: 281  ALKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPP 102
            ALKHIY Y+RP +DA + L   Q+WL+KNPK  +  +++DDI E+RRL+ITP+KAYCLPP
Sbjct: 369  ALKHIYPYRRPVFDAYKKLKVAQEWLLKNPKFFKNQKKLDDIAEIRRLVITPTKAYCLPP 428

Query: 101  EVELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
            EVELSNRVLRKY+ ++DRFLRVTFMDE +QT+N
Sbjct: 429  EVELSNRVLRKYKDVADRFLRVTFMDEGLQTMN 461


>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
            gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
            6 [Theobroma cacao]
          Length = 1197

 Score =  588 bits (1515), Expect = e-165
 Identities = 275/455 (60%), Positives = 363/455 (79%), Gaps = 1/455 (0%)
 Frame = -1

Query: 1364 DNDMIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFEI-NTESV 1188
            + D +VTQ+S+GG  ++++AK LM+Y +++VG+VWRCR+KTS TP +SYPNFEI ++  +
Sbjct: 7    EKDTVVTQVSVGGFGRHVAAKDLMEYFDNEVGVVWRCRLKTSWTPPESYPNFEILDSTVI 66

Query: 1187 QRKTEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRLSEMRRT 1008
            QR  +Y+KVEPHAFVHFA   +A  A++ +    L+  +Q++KVS GP+NPY L+  RR 
Sbjct: 67   QRTDDYKKVEPHAFVHFASPLTATWAVDAAGRTELVFNNQLLKVSLGPENPYYLNRRRRN 126

Query: 1007 TTPFKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAFSIRGEA 828
            TTPFK+  V ++IG + SRDEF VGWRGP  G DFLVDPF+GTC+  F+RDTAFS +G  
Sbjct: 127  TTPFKLSDVCLDIGGMVSRDEFFVGWRGPPFGVDFLVDPFDGTCKFCFSRDTAFSFKGTT 186

Query: 827  RPAVIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEESVPYDLL 648
              AVIKC+FK+EF+ R+INEIK+Y + + +V+ LQLAS P+++YRTADD+IEESVP+DLL
Sbjct: 187  EYAVIKCDFKVEFLVRDINEIKQYTEPSGLVVFLQLASSPRVWYRTADDEIEESVPFDLL 246

Query: 647  DDDDPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPVVDIERLRVQ 468
            DDDD WIRTTDF PSGAIGR NTYR+ +RPR+  +L+KAL +L+E+RVP       LR+ 
Sbjct: 247  DDDDQWIRTTDFTPSGAIGRCNTYRVVIRPRHGAKLKKALDYLREQRVPMDYVRWPLRIS 306

Query: 467  DEPDFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFN 288
            DEPDFG  M DPF+C  YKEG+ F++MF+VNAV+HKGI NQHQ+S++FF+LLR Q  E N
Sbjct: 307  DEPDFGRSMSDPFYCIDYKEGIPFEIMFLVNAVMHKGIFNQHQLSEDFFNLLRDQPREVN 366

Query: 287  LVALKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCL 108
            + ALKHIYSY+RP +DA + L  V  WL++NP L + P+Q+DDIVE+RRL+ITP+KA+CL
Sbjct: 367  VAALKHIYSYRRPVFDAYKRLKTVHDWLLRNPILFKSPKQLDDIVEIRRLVITPTKAHCL 426

Query: 107  PPEVELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
             PEVELSNRVLRKY+ ++DRFLRVTFMDE MQT+N
Sbjct: 427  LPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTIN 461


>ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus
            sinensis]
          Length = 1025

 Score =  587 bits (1512), Expect = e-165
 Identities = 275/452 (60%), Positives = 356/452 (78%), Gaps = 1/452 (0%)
 Frame = -1

Query: 1355 MIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFEI-NTESVQRK 1179
            ++  Q+S GG D+N+ A  L+ YLE++VG VWRCR+KTS TP +SYP+F + NT  V++ 
Sbjct: 10   LVDAQVSFGGFDRNVKAAELVKYLENEVGGVWRCRLKTSCTPSESYPDFSVTNTAEVRKT 69

Query: 1178 TEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRLSEMRRTTTP 999
             +YEKVEPHAFVHFA+     RA++ +    L L  Q +KVS GP+NP+RL++  RT+TP
Sbjct: 70   DDYEKVEPHAFVHFAMPTYVTRAVDAAGRTELFLNGQALKVSLGPENPFRLNQRGRTSTP 129

Query: 998  FKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAFSIRGEARPA 819
            FK+P V +EIG L SRDEF V WRGP +G DFLVDPF+GTC+  FTRD AF+++     A
Sbjct: 130  FKLPDVCVEIGTLVSRDEFFVAWRGPASGTDFLVDPFDGTCKFCFTRDIAFALKSSTEHA 189

Query: 818  VIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEESVPYDLLDDD 639
            VIKC FK+EF+ REIN +K+Y +F+ + ILLQLAS P+++YRTADDDI   VP+D+LDDD
Sbjct: 190  VIKCEFKVEFLVREINLVKQYSEFSCVAILLQLASSPRVWYRTADDDILVLVPFDMLDDD 249

Query: 638  DPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPVVDIERLRVQDEP 459
            DPWIRTTDF PSGAIGR N+YRIS+  R+R +L K + +L ERRV        + +++EP
Sbjct: 250  DPWIRTTDFTPSGAIGRCNSYRISISSRHRGKLSKVITYLGERRVQVDSLSRPITIREEP 309

Query: 458  DFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVA 279
            DF VPM DPFFC  Y+EG+SF++MF+VNAV+HKGIINQHQ+SD+FFDLLR Q+ E N+ A
Sbjct: 310  DFEVPMSDPFFCIHYEEGISFEIMFLVNAVMHKGIINQHQLSDSFFDLLRGQSREVNVAA 369

Query: 278  LKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPE 99
            LKHIYSYK P +DA + L  VQ+WL+K+P+L + P+Q+DDIVEVRRL+ITP+KAYCLPPE
Sbjct: 370  LKHIYSYKWPVFDACKRLKLVQEWLLKDPELYKGPKQIDDIVEVRRLVITPTKAYCLPPE 429

Query: 98   VELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
            VELSNRVLRKY+ ++DRFLRVTFMDE +QT+N
Sbjct: 430  VELSNRVLRKYKDLADRFLRVTFMDEGLQTMN 461


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
            sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
            sinensis]
          Length = 1197

 Score =  587 bits (1512), Expect = e-165
 Identities = 275/452 (60%), Positives = 356/452 (78%), Gaps = 1/452 (0%)
 Frame = -1

Query: 1355 MIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFEI-NTESVQRK 1179
            ++  Q+S GG D+N+ A  L+ YLE++VG VWRCR+KTS TP +SYP+F + NT  V++ 
Sbjct: 10   LVDAQVSFGGFDRNVKAAELVKYLENEVGGVWRCRLKTSCTPSESYPDFSVTNTAEVRKT 69

Query: 1178 TEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRLSEMRRTTTP 999
             +YEKVEPHAFVHFA+     RA++ +    L L  Q +KVS GP+NP+RL++  RT+TP
Sbjct: 70   DDYEKVEPHAFVHFAMPTYVTRAVDAAGRTELFLNGQALKVSLGPENPFRLNQRGRTSTP 129

Query: 998  FKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAFSIRGEARPA 819
            FK+P V +EIG L SRDEF V WRGP +G DFLVDPF+GTC+  FTRD AF+++     A
Sbjct: 130  FKLPDVCVEIGTLVSRDEFFVAWRGPASGTDFLVDPFDGTCKFCFTRDIAFALKSSTEHA 189

Query: 818  VIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEESVPYDLLDDD 639
            VIKC FK+EF+ REIN +K+Y +F+ + ILLQLAS P+++YRTADDDI   VP+D+LDDD
Sbjct: 190  VIKCEFKVEFLVREINLVKQYSEFSCVAILLQLASSPRVWYRTADDDILVLVPFDMLDDD 249

Query: 638  DPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPVVDIERLRVQDEP 459
            DPWIRTTDF PSGAIGR N+YRIS+  R+R +L K + +L ERRV        + +++EP
Sbjct: 250  DPWIRTTDFTPSGAIGRCNSYRISISSRHRGKLSKVITYLGERRVQVDSLSRPITIREEP 309

Query: 458  DFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLVA 279
            DF VPM DPFFC  Y+EG+SF++MF+VNAV+HKGIINQHQ+SD+FFDLLR Q+ E N+ A
Sbjct: 310  DFEVPMSDPFFCIHYEEGISFEIMFLVNAVMHKGIINQHQLSDSFFDLLRGQSREVNVAA 369

Query: 278  LKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPPE 99
            LKHIYSYK P +DA + L  VQ+WL+K+P+L + P+Q+DDIVEVRRL+ITP+KAYCLPPE
Sbjct: 370  LKHIYSYKWPVFDACKRLKLVQEWLLKDPELYKGPKQIDDIVEVRRLVITPTKAYCLPPE 429

Query: 98   VELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
            VELSNRVLRKY+ ++DRFLRVTFMDE +QT+N
Sbjct: 430  VELSNRVLRKYKDLADRFLRVTFMDEGLQTMN 461


>gb|EPS62146.1| hypothetical protein M569_12646, partial [Genlisea aurea]
          Length = 1195

 Score =  581 bits (1497), Expect = e-163
 Identities = 278/456 (60%), Positives = 355/456 (77%), Gaps = 2/456 (0%)
 Frame = -1

Query: 1364 DNDMIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFEINTESVQ 1185
            D D +VTQIS+ G++ +++AKML+D+ +  +G VWRCR+KTSS P DSYPN++I+   VQ
Sbjct: 1    DEDSVVTQISVAGIEDHVTAKMLVDFFQKNIGFVWRCRLKTSSLPPDSYPNYDIDISRVQ 60

Query: 1184 RKTEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRLSEMRRTT 1005
               +YE+ + HA+VHFA+ K A  A + + SG L +G + ++V  GPQNP+R++E RRT 
Sbjct: 61   GNNDYERAKRHAYVHFAIPKCAKLAADAAASGRLTMGQKQLRVGLGPQNPHRMNERRRTI 120

Query: 1004 TPFKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAFSIRGEAR 825
            + +K+  VS+E+G ++S++EF VGWRGP +G DF+VDP+NGTC+I F RDTAFSI  E R
Sbjct: 121  SSYKLFDVSVEVGSMKSQNEFYVGWRGPSSGVDFIVDPYNGTCKIQFERDTAFSITDEDR 180

Query: 824  PAVIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEESVPYDLLD 645
              V+KCNFKIEF PREI EIKRY+DF S++I+LQL S P +YYRTADDDIE++VP+DLL+
Sbjct: 181  LVVMKCNFKIEFTPREIIEIKRYRDFYSLIIMLQLFSSPLIYYRTADDDIEDAVPFDLLE 240

Query: 644  DDDPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPVVDI--ERLRV 471
            DDDPWIRTTDF  +GAIGR NTYRISVRP +  QL KAL +L+ RRV    +   + +RV
Sbjct: 241  DDDPWIRTTDFTSTGAIGRCNTYRISVRPLSGPQLLKALDYLRLRRVKVFDEFKGKHIRV 300

Query: 470  QDEPDFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEF 291
             DEP FG  M DPFFC Q  +GLSFK+ F+VNAV+H GIIN HQM++ FFDLLR Q EE 
Sbjct: 301  MDEPGFGTLMSDPFFCIQNVKGLSFKITFLVNAVLHSGIINYHQMTEEFFDLLRTQPEEL 360

Query: 290  NLVALKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYC 111
             + AL H+   KRP YDA++AL  VQKWL+ NPKLL+RP + +D VEVRRLIITP++AYC
Sbjct: 361  IVPALTHLSFSKRPVYDAVKALKAVQKWLLGNPKLLERPMRNEDTVEVRRLIITPTRAYC 420

Query: 110  LPPEVELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
            +PPEVELSNRVLR YR +SDRFLRVTFMDEAMQ LN
Sbjct: 421  IPPEVELSNRVLRNYRDLSDRFLRVTFMDEAMQILN 456


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
            gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
            6 [Gossypium hirsutum]
          Length = 1196

 Score =  578 bits (1491), Expect = e-162
 Identities = 278/453 (61%), Positives = 357/453 (78%), Gaps = 1/453 (0%)
 Frame = -1

Query: 1358 DMIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFEI-NTESVQR 1182
            + +VTQ+S+GG D+++ A+ LM YLE++VGLVWRCR+KTS TP +SYPNFEI +T  +QR
Sbjct: 9    ETVVTQVSVGGFDRHVKARDLMKYLENEVGLVWRCRLKTSWTPPESYPNFEITDTTVIQR 68

Query: 1181 KTEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRLSEMRRTTT 1002
            K  Y+KVEPHAFVHFA  ++   A++ +    L   +Q++KVS GP+NPY L+  RR TT
Sbjct: 69   KDNYKKVEPHAFVHFASPQAVTWAVDAAGRTELAFNNQLLKVSLGPENPYYLNRRRRDTT 128

Query: 1001 PFKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAFSIRGEARP 822
            PFK+P VS+EIG L S DEF+VGWRGP +G +FLVDPF+ TC+  F+RDTAFS +G    
Sbjct: 129  PFKLPDVSLEIGTLASCDEFIVGWRGPPSGVEFLVDPFDCTCKFCFSRDTAFSFKGTNEH 188

Query: 821  AVIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEESVPYDLLDD 642
            AVIKC+FK+EF+ REINE+K+Y + T  V+LLQLAS P ++YRTADDD E++VP+ LLDD
Sbjct: 189  AVIKCDFKVEFLVREINEVKQYSEPTGFVVLLQLASSPWVWYRTADDDFEKTVPFGLLDD 248

Query: 641  DDPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPVVDIERLRVQDE 462
            DD WIRTTDF  SGAIGR NTYR+ VRPR+  +L+KA+ +L+ERRVP      +LR++DE
Sbjct: 249  DDQWIRTTDFTASGAIGRCNTYRVLVRPRHGLKLKKAMDYLRERRVPVEDLRSQLRIRDE 308

Query: 461  PDFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFNLV 282
            PDFG  M D F+ + YKEG+ F++MF+VNAV+HKGI NQHQ+S +FF LLR Q+ E N+ 
Sbjct: 309  PDFGRSMSDHFY-YIYKEGIPFEIMFLVNAVLHKGIFNQHQLSMDFFRLLRNQSMEVNVA 367

Query: 281  ALKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCLPP 102
            ALKHIYSY+ P YDA   L +V  WL+KNPKL + P Q+DDIVE+RRL+ITP+KAYCL P
Sbjct: 368  ALKHIYSYRHPVYDAYERLKDVHDWLLKNPKLFKSPPQLDDIVEIRRLVITPTKAYCLLP 427

Query: 101  EVELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
            EVELSNRVLRKY+ ++DRFLRVTFMDE MQ +N
Sbjct: 428  EVELSNRVLRKYKDVADRFLRVTFMDEGMQIMN 460


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score =  576 bits (1484), Expect = e-161
 Identities = 271/456 (59%), Positives = 363/456 (79%), Gaps = 4/456 (0%)
 Frame = -1

Query: 1358 DMIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFEI-NTESVQR 1182
            + +VTQ+S+GG D +++AK L++YL+  +GLVWRCR+KTS TP +SYPNFEI +   ++R
Sbjct: 9    ETVVTQVSVGGFDIHVTAKDLLEYLDRAIGLVWRCRLKTSWTPPESYPNFEITDITKIER 68

Query: 1181 KTEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRLSEMRRTTT 1002
              +Y +V PHAFVHFAL +SA  A+  S    L L ++ +KVS GP+NP+ L++ RRTTT
Sbjct: 69   TEDYRRVVPHAFVHFALPQSATLAMNASGRCELFLNNKALKVSLGPKNPFTLNQRRRTTT 128

Query: 1001 PFKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAFSIRGEARP 822
            PFK+  V  EIG L SRDEF VGWRGP +G DFLVDPF+GTC+  F+R+TAFS++  +  
Sbjct: 129  PFKLSDVGFEIGNLVSRDEFFVGWRGPPSGVDFLVDPFDGTCKFCFSRNTAFSLKSTSEH 188

Query: 821  AVIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEESVPYDLLDD 642
            AVIKC+FK+EF+ R+INEI +Y + + +V+LLQLAS P ++YRTADDDIE  VP+DLLDD
Sbjct: 189  AVIKCDFKVEFLVRDINEIIQYTETSCLVLLLQLASAPWVWYRTADDDIEAWVPFDLLDD 248

Query: 641  DDPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPVVD---IERLRV 471
            DDPWIRTTDF  SGAIGR ++YR+S+ PR+  +L KA+ +L+ERRV  + +     R+R+
Sbjct: 249  DDPWIRTTDFTASGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVQVLQEENHRRRIRI 308

Query: 470  QDEPDFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEF 291
             DEPDFG+PM DPFFC  +KEG++F+V+F+VNAV+HKGI NQHQ+S++FFDLLR Q+ E 
Sbjct: 309  LDEPDFGMPMSDPFFCIHHKEGIAFEVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQHTEV 368

Query: 290  NLVALKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYC 111
            N+ ALKHI +Y+RP ++A R L  VQ+WL+KNP L + P+Q+ D+VE+RRL+ITP+KAYC
Sbjct: 369  NVSALKHICTYRRPVFNAYRRLKAVQEWLLKNPNLFKNPKQLGDVVEIRRLVITPTKAYC 428

Query: 110  LPPEVELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
            LPPEVELSNRVLRKY+ ++DRFLRVTFMDE +Q +N
Sbjct: 429  LPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMN 464


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score =  573 bits (1477), Expect = e-161
 Identities = 274/461 (59%), Positives = 355/461 (77%), Gaps = 1/461 (0%)
 Frame = -1

Query: 1382 MGYKIGDNDMIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFEI 1203
            M  K  + + +VTQ+S GG DK+++A+ L+ YL++++G VWRCR+KTS TP +SYPNFEI
Sbjct: 1    METKRREKETVVTQVSFGGFDKDVTARDLVAYLDNEIGQVWRCRLKTSWTPPESYPNFEI 60

Query: 1202 -NTESVQRKTEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRL 1026
             +T  +QR   Y +VEPHAFVHFA   SA  A   +    L    + +KVS GP+NP+ L
Sbjct: 61   TDTAVIQRVDAYRRVEPHAFVHFASPDSATWAKNAAGHCELFFNGRPVKVSLGPENPFHL 120

Query: 1025 SEMRRTTTPFKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAF 846
            ++ RRTT PFK+  V +EIG L SRDEF+VGWRGP +G DFLVDPF+G C+  FTRDTAF
Sbjct: 121  NQRRRTTIPFKLSDVHVEIGTLVSRDEFLVGWRGPPSGVDFLVDPFDGKCKFCFTRDTAF 180

Query: 845  SIRGEARPAVIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEES 666
            S +G    AVI+C+FK+EF+ R+INEIK+Y D + +VILLQLAS P ++YRTADDDIE  
Sbjct: 181  SFKGTTEHAVIRCDFKLEFLVRDINEIKQYTDTSCLVILLQLASAPSVWYRTADDDIEVL 240

Query: 665  VPYDLLDDDDPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPVVDI 486
            VP+DLLDDDDPWIRTTDF PSGAIGR N+YR+S+ PR+  +L++AL FL+ERRV      
Sbjct: 241  VPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLKRALNFLRERRVQEDCLR 300

Query: 485  ERLRVQDEPDFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRR 306
              L V  EP++ +PM DPFFC  ++EG+ F +MF+VNAV+HKGI NQHQ+SD+FFDLLR 
Sbjct: 301  RPLHVTAEPEYEMPMSDPFFCIHHEEGVDFNLMFLVNAVMHKGIFNQHQLSDSFFDLLRN 360

Query: 305  QNEEFNLVALKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITP 126
            Q  + N+ AL+HI SYK P +DA + L  VQ+WL+KNPKL +  +Q+DDIVE+RRL ITP
Sbjct: 361  QPLDVNIAALRHICSYKHPVFDAHKRLKAVQQWLLKNPKLFRSSKQLDDIVEIRRLAITP 420

Query: 125  SKAYCLPPEVELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
            ++AYCLPPEVELSNRVLR+Y+ I+D+FLRVTFMDE +QT+N
Sbjct: 421  TRAYCLPPEVELSNRVLRRYKDIADQFLRVTFMDEGLQTMN 461


>gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
          Length = 1194

 Score =  569 bits (1466), Expect = e-159
 Identities = 274/455 (60%), Positives = 350/455 (76%), Gaps = 1/455 (0%)
 Frame = -1

Query: 1364 DNDMIVTQISLGGLDKNISAKMLMDYLEDKVGLVWRCRVKTSSTPQDSYPNFE-INTESV 1188
            + D +VTQIS+GG D+++ AK LMD+LE +VG+V+RCR+KTS T ++SYP FE IN+E++
Sbjct: 7    EKDTVVTQISIGGFDRHVKAKDLMDFLEYEVGIVYRCRLKTSCTARESYPTFENINSENI 66

Query: 1187 QRKTEYEKVEPHAFVHFALAKSAARALELSESGHLMLGSQIIKVSSGPQNPYRLSEMRRT 1008
                +  +VEPHAFVHFA  +S    L    S  LML +Q +KV+ GP+  YR+++ RRT
Sbjct: 67   MESIDIRQVEPHAFVHFASPESVNWTL----SNPLMLNNQTLKVTLGPETLYRMNQRRRT 122

Query: 1007 TTPFKIPGVSIEIGVLRSRDEFVVGWRGPQTGADFLVDPFNGTCQIHFTRDTAFSIRGEA 828
            TTP K+  V +EIG L  RDEF V WRGP  G DFLVDPF+G C+  FTRDTAFS +  A
Sbjct: 123  TTPIKLADVIVEIGNLVRRDEFFVAWRGPSYGVDFLVDPFDGLCKFCFTRDTAFSFKDMA 182

Query: 827  RPAVIKCNFKIEFVPREINEIKRYKDFTSIVILLQLASCPKLYYRTADDDIEESVPYDLL 648
            + A++KC+FK+EF+ R+INEIK+Y D + +V+LL LAS P+++YRTADDDIE SVP+DLL
Sbjct: 183  KLAMMKCDFKVEFLVRDINEIKQYTDTSHLVVLLLLASSPRVWYRTADDDIEVSVPFDLL 242

Query: 647  DDDDPWIRTTDFVPSGAIGRSNTYRISVRPRNRRQLEKALGFLQERRVPPVVDIERLRVQ 468
            DDDDPWIRTTDF PSGAIGR N+YR+S+ PR+  +L+KA+ +L+ERRV      + LR+Q
Sbjct: 243  DDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGSKLKKAMSYLRERRVQETPLRKALRIQ 302

Query: 467  DEPDFGVPMPDPFFCFQYKEGLSFKVMFMVNAVVHKGIINQHQMSDNFFDLLRRQNEEFN 288
             EPDF VPM DP F    K G+ F++MF++N +VHKGI NQH +SD  FDL R Q  E N
Sbjct: 303  SEPDFAVPMSDPIFYVHGKHGIPFEIMFLLNVIVHKGIFNQHNISDGLFDLFRNQPREIN 362

Query: 287  LVALKHIYSYKRPTYDALRALDNVQKWLMKNPKLLQRPEQMDDIVEVRRLIITPSKAYCL 108
            L ALKHI SYKRP +DA   L NVQ+WL++NPKLL+ P Q+DDI EVRRL+ITP++AYCL
Sbjct: 363  LAALKHISSYKRPVFDAYAKLKNVQEWLLRNPKLLKIPRQLDDIAEVRRLVITPTRAYCL 422

Query: 107  PPEVELSNRVLRKYRSISDRFLRVTFMDEAMQTLN 3
            PPEVELSNRVLRKY+ +SDRFLRVTFMDE MQT+N
Sbjct: 423  PPEVELSNRVLRKYKEVSDRFLRVTFMDEGMQTMN 457