BLASTX nr result

ID: Mentha25_contig00021439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00021439
         (307 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635431.1| PREDICTED: splicing factor U2af large subuni...    55   8e-06
ref|XP_002267854.2| PREDICTED: splicing factor U2af large subuni...    55   8e-06
emb|CBI35711.3| unnamed protein product [Vitis vinifera]               55   8e-06
emb|CBI25913.3| unnamed protein product [Vitis vinifera]               55   8e-06

>ref|XP_003635431.1| PREDICTED: splicing factor U2af large subunit B-like, partial
           [Vitis vinifera]
          Length = 238

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = +1

Query: 1   ALSGRKFGGNSVTALYYPEDKYYDRDYAA 87
           ALSGRKFGGN V+A+YYPEDKYYD DY A
Sbjct: 210 ALSGRKFGGNVVSAVYYPEDKYYDGDYGA 238


>ref|XP_002267854.2| PREDICTED: splicing factor U2af large subunit B-like, partial
           [Vitis vinifera]
          Length = 410

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = +1

Query: 1   ALSGRKFGGNSVTALYYPEDKYYDRDYAA 87
           ALSGRKFGGN V+A+YYPEDKYYD DY A
Sbjct: 382 ALSGRKFGGNVVSAVYYPEDKYYDGDYGA 410


>emb|CBI35711.3| unnamed protein product [Vitis vinifera]
          Length = 116

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = +1

Query: 1   ALSGRKFGGNSVTALYYPEDKYYDRDYAA 87
           ALSGRKFGGN V+A+YYPEDKYYD DY A
Sbjct: 88  ALSGRKFGGNVVSAVYYPEDKYYDGDYGA 116


>emb|CBI25913.3| unnamed protein product [Vitis vinifera]
          Length = 6467

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = +1

Query: 1    ALSGRKFGGNSVTALYYPEDKYYDRDYAA 87
            ALSGRKFGGN V+A+YYPEDKYYD DY A
Sbjct: 6439 ALSGRKFGGNVVSAVYYPEDKYYDGDYGA 6467


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