BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00019939
         (1024 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520500.1| pentatricopeptide repeat-containing protein,...   487   e-135
ref|XP_002313416.2| chlororespiratory reduction 2 family protein...   470   e-130
ref|XP_007016304.1| Tetratricopeptide repeat (TPR)-like superfam...   464   e-128
ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi...   463   e-128
ref|XP_006427693.1| hypothetical protein CICLE_v10025096mg [Citr...   456   e-126
ref|NP_190263.1| protein CHLORORESPIRATORY REDUCTION 2 [Arabidop...   456   e-126
ref|XP_006353232.1| PREDICTED: pentatricopeptide repeat-containi...   455   e-125
ref|XP_004250510.1| PREDICTED: pentatricopeptide repeat-containi...   454   e-125
ref|XP_006493448.1| PREDICTED: pentatricopeptide repeat-containi...   453   e-125
gb|EXC10733.1| hypothetical protein L484_025317 [Morus notabilis]     452   e-125
ref|XP_006290707.1| hypothetical protein CARUB_v10016805mg [Caps...   452   e-124
ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containi...   450   e-124
ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arab...   448   e-123
ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containi...   446   e-123
ref|XP_007139395.1| hypothetical protein PHAVU_008G025900g [Phas...   446   e-123
ref|XP_004491940.1| PREDICTED: pentatricopeptide repeat-containi...   443   e-122
ref|XP_006418855.1| hypothetical protein EUTSA_v10002433mg [Eutr...   442   e-121
ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containi...   439   e-120
ref|XP_004307227.1| PREDICTED: pentatricopeptide repeat-containi...   434   e-119
ref|XP_003621549.1| Pentatricopeptide repeat-containing protein ...   427   e-117

>ref|XP_002520500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540342|gb|EEF41913.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 414

 Score =  487 bits (1254), Expect = e-135
 Identities = 237/340 (69%), Positives = 286/340 (84%)
 Frame = +3

Query: 3    LTVPISTTSKNHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITV 182
            L   I T + N  IQSLC++G LKQA++LL +E +P QHTYELL+ SC  + S  DA  V
Sbjct: 34   LNPTIPTANSNKLIQSLCKQGNLKQALNLLCNEPDPAQHTYELLLLSCTHQNSFLDAQFV 93

Query: 183  HKNLTEDGFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDG 362
            H++L ++GFDQDPFLATKLINMY+  GS+  AR+VFD    RT+YV+NA+FRAL+L+G+G
Sbjct: 94   HQHLLDNGFDQDPFLATKLINMYSSFGSIDNARKVFDKTRSRTLYVYNALFRALTLVGNG 153

Query: 363  EEVLRLYRRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHI 542
            EEVLRLYRRMN IGMPSDRFTYTYVLKACV S S LSL ++GKE+HAQ+LRRGYE H+HI
Sbjct: 154  EEVLRLYRRMNSIGMPSDRFTYTYVLKACVASNSLLSLLKKGKEIHAQILRRGYEAHVHI 213

Query: 543  MTTLVDMYAKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESV 722
            MTTLVDMYA+FG V  AS VFS M VKN+VSWSAMIAC+AKNGRPFEALELFREMM E+ 
Sbjct: 214  MTTLVDMYARFGYVSYASCVFSEMSVKNVVSWSAMIACYAKNGRPFEALELFREMMLETK 273

Query: 723  DVLPNSVTMVSVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLG 902
            D+ PNSVTMVSV+QACAAL+ALEQGKL+HGYI+R GLDS+LPV+++LVTMYARCG L+L 
Sbjct: 274  DMCPNSVTMVSVLQACAALAALEQGKLLHGYILRRGLDSILPVISSLVTMYARCGKLQLA 333

Query: 903  ENVFNQMEKRDVVSWNSLISSYAIHGLGSKALATFQAMVQ 1022
            ++VF+QM+KRDVVSWNSLISSY +HG G KA+  F+ M +
Sbjct: 334  QHVFDQMDKRDVVSWNSLISSYGVHGFGKKAIQIFKDMTR 373



 Score =  125 bits (313), Expect = 4e-26
 Identities = 70/235 (29%), Positives = 131/235 (55%), Gaps = 6/235 (2%)
 Frame = +3

Query: 120 TYELLIQSCAQKKSISDAIT----VHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
           TY  ++++C    S+   +     +H  +   G++    + T L++MYA  G V YA  V
Sbjct: 174 TYTYVLKACVASNSLLSLLKKGKEIHAQILRRGYEAHVHIMTTLVDMYARFGYVSYASCV 233

Query: 288 FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLI--GMPSDRFTYTYVLKACVVSG 461
           F  ++ + +  W+A+    +  G   E L L+R M L    M  +  T   VL+AC    
Sbjct: 234 FSEMSVKNVVSWSAMIACYAKNGRPFEALELFREMMLETKDMCPNSVTMVSVLQACAA-- 291

Query: 462 SELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWS 641
             L+   +GK +H  +LRRG ++ L ++++LV MYA+ G+++ A  VF  M  +++VSW+
Sbjct: 292 --LAALEQGKLLHGYILRRGLDSILPVISSLVTMYARCGKLQLAQHVFDQMDKRDVVSWN 349

Query: 642 AMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQGKLI 806
           ++I+ +  +G   +A+++F++M R    V P+ ++ VSV+ AC+    +E+GK++
Sbjct: 350 SLISSYGVHGFGKKAIQIFKDMTRNG--VFPSPISFVSVLGACSHAGLVEEGKIL 402



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 30/118 (25%), Positives = 59/118 (50%)
 Frame = +3

Query: 108 PTQHTYELLIQSCAQKKSISDAITVHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
           P   T   ++Q+CA   ++     +H  +   G D    + + L+ MYA  G +Q A+ V
Sbjct: 277 PNSVTMVSVLQACAALAALEQGKLLHGYILRRGLDSILPVISSLVTMYARCGKLQLAQHV 336

Query: 288 FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMPSDRFTYTYVLKACVVSG 461
           FD +  R +  WN++  +  + G G++ +++++ M   G+     ++  VL AC  +G
Sbjct: 337 FDQMDKRDVVSWNSLISSYGVHGFGKKAIQIFKDMTRNGVFPSPISFVSVLGACSHAG 394


>ref|XP_002313416.2| chlororespiratory reduction 2 family protein [Populus trichocarpa]
            gi|550331005|gb|EEE87371.2| chlororespiratory reduction 2
            family protein [Populus trichocarpa]
          Length = 650

 Score =  470 bits (1210), Expect = e-130
 Identities = 230/333 (69%), Positives = 276/333 (82%)
 Frame = +3

Query: 18   STTSKNHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNLT 197
            ST   N  IQSLC++G L QA+ LLS E NP QHTYELLI SC  + S+ DA  VH++L 
Sbjct: 38   STADNNKLIQSLCKQGNLTQALELLSLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLL 97

Query: 198  EDGFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLR 377
            E+GFDQDPFLATKLINMY+   S+  AR+VFD   +RTIYV+NA+FRALSL G GEEVL 
Sbjct: 98   ENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLN 157

Query: 378  LYRRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHIMTTLV 557
            +YRRMN IG+PSDRFTYTYVLKACV S   +SL  +G+E+HA +LR GY+ ++HIMTTLV
Sbjct: 158  MYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLV 217

Query: 558  DMYAKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVDVLPN 737
            DMYAKFG V +AS VF+ MPVKN+VSWSAMIAC+AKNG+ FEALELFRE+M E+ D+ PN
Sbjct: 218  DMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPN 277

Query: 738  SVTMVSVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLGENVFN 917
            SVTMVSV+QACAAL+ALEQG+LIHGYI+R GLDS+LPV++ALVTMYARCG L+LG+ VF+
Sbjct: 278  SVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFD 337

Query: 918  QMEKRDVVSWNSLISSYAIHGLGSKALATFQAM 1016
            QM+KRDVVSWNSLISSY +HG G KA+  F+ M
Sbjct: 338  QMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEM 370



 Score =  120 bits (302), Expect = 7e-25
 Identities = 76/294 (25%), Positives = 149/294 (50%), Gaps = 8/294 (2%)
 Frame = +3

Query: 120  TYELLIQSCAQKKSISDAIT----VHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
            TY  ++++C   +     +     +H ++   G+D    + T L++MYA+ G V  A  V
Sbjct: 173  TYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCV 232

Query: 288  FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLI--GMPSDRFTYTYVLKACVVSG 461
            F+ +  + +  W+A+    +  G   E L L+R + L    +  +  T   VL+AC    
Sbjct: 233  FNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAA-- 290

Query: 462  SELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWS 641
              L+   +G+ +H  +LR+G ++ L +++ LV MYA+ G++E    VF  M  +++VSW+
Sbjct: 291  --LAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWN 348

Query: 642  AMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQGKLIHGYI- 818
            ++I+ +  +G   +A+ +F EM    V+  P+ V+ VSV+ AC+    +++GK++   + 
Sbjct: 349  SLISSYGVHGFGKKAIGIFEEMTYNGVE--PSPVSFVSVLGACSHAGLVDEGKMLFSSMH 406

Query: 819  IRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQME-KRDVVSWNSLISSYAIH 977
            + +G+   +     +V +  R   L+    +   M  +     W SL+ S  IH
Sbjct: 407  VAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIH 460



 Score =  108 bits (271), Expect = 3e-21
 Identities = 70/236 (29%), Positives = 124/236 (52%), Gaps = 4/236 (1%)
 Frame = +3

Query: 324  NAIFRALSLLGDGEEVLRLYRRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHA 503
            N + ++L   G+  + L L   ++L   P+   TY  ++ +C    S L   R    VH 
Sbjct: 43   NKLIQSLCKQGNLTQALEL---LSLEPNPAQH-TYELLILSCTHQNSLLDAQR----VHR 94

Query: 504  QLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFE 683
             LL  G++    + T L++MY+ F  +++A  VF     + +  ++A+    +  G   E
Sbjct: 95   HLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEE 154

Query: 684  ALELFREMMRESVDVLPNSVTMVSVIQACAA----LSALEQGKLIHGYIIRNGLDSVLPV 851
             L ++R M   S+ +  +  T   V++AC A    +S L +G+ IH +I+R+G D  + +
Sbjct: 155  VLNMYRRM--NSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHI 212

Query: 852  MNALVTMYARCGDLKLGENVFNQMEKRDVVSWNSLISSYAIHGLGSKALATFQAMV 1019
            M  LV MYA+ G +     VFNQM  ++VVSW+++I+ YA +G   +AL  F+ ++
Sbjct: 213  MTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELM 268



 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 7/201 (3%)
 Frame = +3

Query: 42  IQSLCRKGKLKQAIHLLSDEENPTQH------TYELLIQSCAQKKSISDAITVHKNLTED 203
           I    + GK  +A+ L  +    TQ       T   ++Q+CA   ++     +H  +   
Sbjct: 248 IACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRK 307

Query: 204 GFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLY 383
           G D    + + L+ MYA  G ++  ++VFD +  R +  WN++  +  + G G++ + ++
Sbjct: 308 GLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIF 367

Query: 384 RRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQL-LRRGYETHLHIMTTLVD 560
             M   G+     ++  VL AC    S   L   GK + + + +  G    +     +VD
Sbjct: 368 EEMTYNGVEPSPVSFVSVLGAC----SHAGLVDEGKMLFSSMHVAHGICPSVEHYACMVD 423

Query: 561 MYAKFGRVESASLVFSSMPVK 623
           +  +  R+E A+ +  +M ++
Sbjct: 424 LLGRANRLEEAAKIIENMRIE 444


>ref|XP_007016304.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
            cacao] gi|508786667|gb|EOY33923.1| Tetratricopeptide
            repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 651

 Score =  464 bits (1193), Expect = e-128
 Identities = 226/338 (66%), Positives = 277/338 (81%)
 Frame = +3

Query: 6    TVPISTTSKNHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVH 185
            ++  S  + N  IQSLC++G LKQA  LLS E NP+Q TYELLI SCA + S+S A ++H
Sbjct: 35   SISTSNLNNNQLIQSLCKEGNLKQAFKLLSQEPNPSQRTYELLILSCAHQNSLSLAQSLH 94

Query: 186  KNLTEDGFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGE 365
             +++++GFDQDPFL TKLI+MY+ L S+  AR++FD    RTI+VWNA+FRAL+L G GE
Sbjct: 95   SHISQNGFDQDPFLVTKLISMYSALDSLDDARKLFDKTRKRTIFVWNALFRALTLAGFGE 154

Query: 366  EVLRLYRRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHIM 545
            EVL LYR+MN  G+PSDRFTYTYVLKACV S   +SL ++GKE+HA +LR GYE H+HIM
Sbjct: 155  EVLGLYRQMNRTGIPSDRFTYTYVLKACVASECLVSLLKKGKEIHAYILRHGYEAHVHIM 214

Query: 546  TTLVDMYAKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVD 725
            TTLVDMYA+FG V  AS VF  MPV+N+VSWSAMIAC+AKNG+ FEALELFREMM E+ D
Sbjct: 215  TTLVDMYARFGCVSCASFVFGEMPVRNVVSWSAMIACYAKNGKSFEALELFREMMVETHD 274

Query: 726  VLPNSVTMVSVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLGE 905
              PNSVTMVSV+QACAAL+ALEQGKLIH YI+R GLDSVLPV++AL+TMY+RCG L+LG+
Sbjct: 275  SFPNSVTMVSVLQACAALAALEQGKLIHAYILRRGLDSVLPVISALITMYSRCGKLELGQ 334

Query: 906  NVFNQMEKRDVVSWNSLISSYAIHGLGSKALATFQAMV 1019
             +F+QMEKRDVVSWNSLISSYA+HG G KA+  FQ M+
Sbjct: 335  RIFDQMEKRDVVSWNSLISSYAVHGFGKKAIQIFQEMI 372



 Score =  129 bits (323), Expect = 3e-27
 Identities = 81/294 (27%), Positives = 151/294 (51%), Gaps = 8/294 (2%)
 Frame = +3

Query: 120  TYELLIQSCAQKKSISDAIT----VHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
            TY  ++++C   + +   +     +H  +   G++    + T L++MYA  G V  A  V
Sbjct: 174  TYTYVLKACVASECLVSLLKKGKEIHAYILRHGYEAHVHIMTTLVDMYARFGCVSCASFV 233

Query: 288  FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMPS--DRFTYTYVLKACVVSG 461
            F  +  R +  W+A+    +  G   E L L+R M +    S  +  T   VL+AC    
Sbjct: 234  FGEMPVRNVVSWSAMIACYAKNGKSFEALELFREMMVETHDSFPNSVTMVSVLQACAA-- 291

Query: 462  SELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWS 641
              L+   +GK +HA +LRRG ++ L +++ L+ MY++ G++E    +F  M  +++VSW+
Sbjct: 292  --LAALEQGKLIHAYILRRGLDSVLPVISALITMYSRCGKLELGQRIFDQMEKRDVVSWN 349

Query: 642  AMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQGK-LIHGYI 818
            ++I+ +A +G   +A+++F+EM+ + V   P+ VT VSV+ AC+    +E+GK L     
Sbjct: 350  SLISSYAVHGFGKKAIQIFQEMIHQGVS--PSPVTFVSVLGACSHAGLVEEGKWLFDSMH 407

Query: 819  IRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQME-KRDVVSWNSLISSYAIH 977
              +G+   +     +V +  R   L+    + ++M  +     W SL+ S  IH
Sbjct: 408  KEHGIYPSVEHYACMVDLLGRANRLEEAARIIDEMRIEPGAKVWGSLLGSCRIH 461



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 43/201 (21%), Positives = 91/201 (45%), Gaps = 7/201 (3%)
 Frame = +3

Query: 42  IQSLCRKGKLKQAIHLLSD------EENPTQHTYELLIQSCAQKKSISDAITVHKNLTED 203
           I    + GK  +A+ L  +      +  P   T   ++Q+CA   ++     +H  +   
Sbjct: 249 IACYAKNGKSFEALELFREMMVETHDSFPNSVTMVSVLQACAALAALEQGKLIHAYILRR 308

Query: 204 GFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLY 383
           G D    + + LI MY+  G ++  +++FD +  R +  WN++  + ++ G G++ ++++
Sbjct: 309 GLDSVLPVISALITMYSRCGKLELGQRIFDQMEKRDVVSWNSLISSYAVHGFGKKAIQIF 368

Query: 384 RRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLR-RGYETHLHIMTTLVD 560
           + M   G+     T+  VL AC    S   L   GK +   + +  G    +     +VD
Sbjct: 369 QEMIHQGVSPSPVTFVSVLGAC----SHAGLVEEGKWLFDSMHKEHGIYPSVEHYACMVD 424

Query: 561 MYAKFGRVESASLVFSSMPVK 623
           +  +  R+E A+ +   M ++
Sbjct: 425 LLGRANRLEEAARIIDEMRIE 445


>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic [Vitis vinifera]
          Length = 658

 Score =  463 bits (1192), Expect = e-128
 Identities = 225/333 (67%), Positives = 274/333 (82%)
 Frame = +3

Query: 21   TTSKNHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNLTE 200
            + + N  IQSLC++G L QA+ +LS E NPTQHTYELLI SC ++ S+   I +H++L  
Sbjct: 47   SNNNNPLIQSLCKQGNLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIH 106

Query: 201  DGFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRL 380
            DG DQDPFLATKLINMY+EL S+  AR+VFD    RTIYVWNA+FRAL+L G G EVL L
Sbjct: 107  DGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDL 166

Query: 381  YRRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHIMTTLVD 560
            YRRMN IG+PSDRFTYTYVLKACV S + +SL   G+E+H  +LR G+E H+HIMTTL+D
Sbjct: 167  YRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLD 226

Query: 561  MYAKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVDVLPNS 740
            MYA+FG V +AS VF  MPVKN+VSWSAMIAC++KNG+P EALELFR+MM E+ D+LPNS
Sbjct: 227  MYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNS 286

Query: 741  VTMVSVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQ 920
            VTMVSV+QACAAL+ALEQGKL+HGYI+R GLDS+LPV++ALVT+YARCG+L+LG  VF +
Sbjct: 287  VTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFER 346

Query: 921  MEKRDVVSWNSLISSYAIHGLGSKALATFQAMV 1019
            MEKRDVVSWNSLISSY IHG G KA+  F+ M+
Sbjct: 347  MEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMI 379



 Score =  125 bits (315), Expect = 2e-26
 Identities = 80/296 (27%), Positives = 152/296 (51%), Gaps = 10/296 (3%)
 Frame = +3

Query: 120  TYELLIQSCAQKKSISDAIT----VHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
            TY  ++++C   ++    +     +H ++   GF+    + T L++MYA  G V  A +V
Sbjct: 181  TYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRV 240

Query: 288  FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMP--SDRFTYTYVLKACVVSG 461
            FD +  + +  W+A+    S  G   E L L+R+M L       +  T   VL+AC    
Sbjct: 241  FDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAA-- 298

Query: 462  SELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWS 641
              L+   +GK +H  +LRRG ++ L +++ LV +YA+ G +E    VF  M  +++VSW+
Sbjct: 299  --LAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWN 356

Query: 642  AMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQGKLIHGYII 821
            ++I+ +  +G   +A+++F+EM+ + +   P+ ++ VSV+ AC+    +E+GK++   ++
Sbjct: 357  SLISSYGIHGFGRKAIQIFKEMIDQGLS--PSPISFVSVLGACSHAGLVEEGKVLFESMV 414

Query: 822  RNGLDSVLPVMN---ALVTMYARCGDLKLGENVFNQME-KRDVVSWNSLISSYAIH 977
            R     + P +     +V +  R   L     + + M  +     W SL+ S  IH
Sbjct: 415  RG--HKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIH 468



 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 36/174 (20%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
 Frame = +3

Query: 108 PTQHTYELLIQSCAQKKSISDAITVHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
           P   T   ++Q+CA   ++     +H  +   G D    + + L+ +YA  G+++   +V
Sbjct: 284 PNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRV 343

Query: 288 FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMPSDRFTYTYVLKACVVSGSE 467
           F+ +  R +  WN++  +  + G G + +++++ M   G+     ++  VL AC    S 
Sbjct: 344 FERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGAC----SH 399

Query: 468 LSLSRRGKEVHAQLLRRGYETHLHI--MTTLVDMYAKFGRVESASLVFSSMPVK 623
             L   GK +   ++ RG++    +     +VD+  +  R++ A+ +   M ++
Sbjct: 400 AGLVEEGKVLFESMV-RGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIE 452


>ref|XP_006427693.1| hypothetical protein CICLE_v10025096mg [Citrus clementina]
            gi|557529683|gb|ESR40933.1| hypothetical protein
            CICLE_v10025096mg [Citrus clementina]
          Length = 662

 Score =  456 bits (1173), Expect = e-126
 Identities = 227/337 (67%), Positives = 271/337 (80%), Gaps = 2/337 (0%)
 Frame = +3

Query: 15   ISTTSKNHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNL 194
            +S+ +KN  IQSLC++G LKQA+ +LS E NPTQHTYELL+ SCA   S+SDA+ VH +L
Sbjct: 47   LSSRNKNELIQSLCKQGNLKQALDVLSSEPNPTQHTYELLLLSCAHHNSLSDALNVHCHL 106

Query: 195  TEDGFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVL 374
            T++GFDQDPFL TKLIN+Y+   SV  AR VFD    RTIYVWNA+FRAL+L G GEEVL
Sbjct: 107  TDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVL 166

Query: 375  RLYRRMNLIG--MPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHIMT 548
             LYRRMN  G  + SDRFTYTYVLKACV S    SL + GKE+HA +LR GY   +HIMT
Sbjct: 167  ELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMT 226

Query: 549  TLVDMYAKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVDV 728
            TL+DMYA+FG V  A  VFS M VKN+VSWSAMIAC+A+NG  FEALELFREM+ ES D+
Sbjct: 227  TLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDL 286

Query: 729  LPNSVTMVSVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLGEN 908
             PNSVTMVSV+QACAAL+ALEQGK+IHGYI+R GLDS+LPV++ALVTMYARCG L+LG+ 
Sbjct: 287  CPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQC 346

Query: 909  VFNQMEKRDVVSWNSLISSYAIHGLGSKALATFQAMV 1019
            VF+ M+KRDVVSWNSLISSY +HG G KA+  F+ M+
Sbjct: 347  VFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMI 383



 Score =  122 bits (305), Expect = 3e-25
 Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 10/296 (3%)
 Frame = +3

Query: 120  TYELLIQSCAQKKS----ISDAITVHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
            TY  ++++C         +     +H ++   G++    + T LI+MYA  G V YA  V
Sbjct: 185  TYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFV 244

Query: 288  FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIG--MPSDRFTYTYVLKACVVSG 461
            F  +  + +  W+A+    +  G   E L L+R M +    +  +  T   VL+AC    
Sbjct: 245  FSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAA-- 302

Query: 462  SELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWS 641
              L+   +GK +H  +LRRG ++ L +++ LV MYA+ G++E    VF  M  +++VSW+
Sbjct: 303  --LAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWN 360

Query: 642  AMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQGKLIHGYII 821
            ++I+ +  +G   +A+++F+EM+   V   P+ ++ VSV+ AC+    +E+GK++   + 
Sbjct: 361  SLISSYGVHGYGGKAIQIFKEMIYHGVS--PSPISFVSVLGACSHAGLVEEGKMLFESMR 418

Query: 822  RNGLDSVLPVMN---ALVTMYARCGDLKLGENVFNQME-KRDVVSWNSLISSYAIH 977
            +  +  V P +     +V +  R   L+    +   +  +     W SL+ S  IH
Sbjct: 419  KEHM--VRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 472



 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 41/201 (20%), Positives = 87/201 (43%), Gaps = 7/201 (3%)
 Frame = +3

Query: 42  IQSLCRKGKLKQAIHLL------SDEENPTQHTYELLIQSCAQKKSISDAITVHKNLTED 203
           I    R G   +A+ L       S +  P   T   ++Q+CA   ++     +H  +   
Sbjct: 260 IACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRR 319

Query: 204 GFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLY 383
           G D    + + L+ MYA  G ++  + VFD++  R +  WN++  +  + G G + ++++
Sbjct: 320 GLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIF 379

Query: 384 RRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRG-YETHLHIMTTLVD 560
           + M   G+     ++  VL AC    S   L   GK +   + +       +     +VD
Sbjct: 380 KEMIYHGVSPSPISFVSVLGAC----SHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVD 435

Query: 561 MYAKFGRVESASLVFSSMPVK 623
           +  +  ++E A+ +   + ++
Sbjct: 436 LLGRANKLEEAAKIIEDLRIE 456


>ref|NP_190263.1| protein CHLORORESPIRATORY REDUCTION 2 [Arabidopsis thaliana]
            gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g46790, chloroplastic; AltName: Full=Protein
            CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
            gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis
            thaliana] gi|110741961|dbj|BAE98921.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|332644684|gb|AEE78205.1| protein chlororespiratory
            reduction 2 [Arabidopsis thaliana]
          Length = 657

 Score =  456 bits (1173), Expect = e-126
 Identities = 221/331 (66%), Positives = 271/331 (81%)
 Frame = +3

Query: 27   SKNHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNLTEDG 206
            S N  IQSLC++GKLKQAI +LS E +P+Q TYELLI  C  + S+SDA+ VH+++ ++G
Sbjct: 48   SNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNG 107

Query: 207  FDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLYR 386
             DQDPFLATKLI MY++LGSV YAR+VFD    RTIYVWNA+FRAL+L G GEEVL LY 
Sbjct: 108  SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYW 167

Query: 387  RMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMY 566
            +MN IG+ SDRFTYTYVLKACV S   ++   +GKE+HA L RRGY +H++IMTTLVDMY
Sbjct: 168  KMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMY 227

Query: 567  AKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVDVLPNSVT 746
            A+FG V+ AS VF  MPV+N+VSWSAMIAC+AKNG+ FEAL  FREMMRE+ D  PNSVT
Sbjct: 228  ARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVT 287

Query: 747  MVSVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQME 926
            MVSV+QACA+L+ALEQGKLIHGYI+R GLDS+LPV++ALVTMY RCG L++G+ VF++M 
Sbjct: 288  MVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMH 347

Query: 927  KRDVVSWNSLISSYAIHGLGSKALATFQAMV 1019
             RDVVSWNSLISSY +HG G KA+  F+ M+
Sbjct: 348  DRDVVSWNSLISSYGVHGYGKKAIQIFEEML 378



 Score =  130 bits (326), Expect = 1e-27
 Identities = 84/295 (28%), Positives = 146/295 (49%), Gaps = 8/295 (2%)
 Frame = +3

Query: 120  TYELLIQSCAQKKSISDAIT----VHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
            TY  ++++C   +   + +     +H +LT  G+    ++ T L++MYA  G V YA  V
Sbjct: 180  TYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYV 239

Query: 288  FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMPS--DRFTYTYVLKACVVSG 461
            F  +  R +  W+A+    +  G   E LR +R M      S  +  T   VL+AC    
Sbjct: 240  FGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQAC---- 295

Query: 462  SELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWS 641
            + L+   +GK +H  +LRRG ++ L +++ LV MY + G++E    VF  M  +++VSW+
Sbjct: 296  ASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWN 355

Query: 642  AMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQGKLIHGYII 821
            ++I+ +  +G   +A+++F EM+       P  VT VSV+ AC+    +E+GK +   + 
Sbjct: 356  SLISSYGVHGYGKKAIQIFEEMLANGAS--PTPVTFVSVLGACSHEGLVEEGKRLFETMW 413

Query: 822  R-NGLDSVLPVMNALVTMYARCGDLKLGENVFNQMEKRDVVS-WNSLISSYAIHG 980
            R +G+   +     +V +  R   L     +   M        W SL+ S  IHG
Sbjct: 414  RDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468



 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 4/237 (1%)
 Frame = +3

Query: 324  NAIFRALSLLGDGEEVLRLYRRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHA 503
            N + ++L   G  ++ +R+  + +    PS + TY  ++  C   G   SLS     VH 
Sbjct: 50   NQLIQSLCKEGKLKQAIRVLSQES---SPSQQ-TYELLILCC---GHRSSLSD-ALRVHR 101

Query: 504  QLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFE 683
             +L  G +    + T L+ MY+  G V+ A  VF     + +  W+A+       G   E
Sbjct: 102  HILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEE 161

Query: 684  ALELFREMMRESVDVLPNSVTMVSVIQACAA----LSALEQGKLIHGYIIRNGLDSVLPV 851
             L L+ +M R  V+   +  T   V++AC A    ++ L +GK IH ++ R G  S + +
Sbjct: 162  VLGLYWKMNRIGVE--SDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYI 219

Query: 852  MNALVTMYARCGDLKLGENVFNQMEKRDVVSWNSLISSYAIHGLGSKALATFQAMVQ 1022
            M  LV MYAR G +     VF  M  R+VVSW+++I+ YA +G   +AL TF+ M++
Sbjct: 220  MTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMR 276



 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 7/198 (3%)
 Frame = +3

Query: 42  IQSLCRKGKLKQAIHLLSD------EENPTQHTYELLIQSCAQKKSISDAITVHKNLTED 203
           I    + GK  +A+    +      + +P   T   ++Q+CA   ++     +H  +   
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314

Query: 204 GFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLY 383
           G D    + + L+ MY   G ++  ++VFD + DR +  WN++  +  + G G++ ++++
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 374

Query: 384 RRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLR-RGYETHLHIMTTLVD 560
             M   G      T+  VL AC    S   L   GK +   + R  G +  +     +VD
Sbjct: 375 EEMLANGASPTPVTFVSVLGAC----SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVD 430

Query: 561 MYAKFGRVESASLVFSSM 614
           +  +  R++ A+ +   M
Sbjct: 431 LLGRANRLDEAAKMVQDM 448


>ref|XP_006353232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Solanum tuberosum]
          Length = 653

 Score =  455 bits (1171), Expect = e-125
 Identities = 220/336 (65%), Positives = 274/336 (81%)
 Frame = +3

Query: 15   ISTTSKNHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNL 194
            IS  + N SIQS C+KG+LK+A+ LLS E NPTQHTYELLI SC++K S  DA+TVH+ L
Sbjct: 46   ISRCNYNDSIQSFCKKGQLKEALQLLSQEPNPTQHTYELLILSCSEKHSFYDALTVHRKL 105

Query: 195  TEDGFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVL 374
             +DGF+QD FLATKLINM++   S+ +ARQVFD I +RTI++WNA FRAL+L G+G EVL
Sbjct: 106  IDDGFEQDSFLATKLINMFSNFDSIDHARQVFDKIYNRTIFLWNAFFRALTLAGNGVEVL 165

Query: 375  RLYRRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHIMTTL 554
             LYR MN IG+ SDRFTYTYVLKACVV+          KE+HA + R GYETH+HIMTTL
Sbjct: 166  DLYRHMNAIGIQSDRFTYTYVLKACVVASIP-----NHKEIHAHIFRHGYETHIHIMTTL 220

Query: 555  VDMYAKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVDVLP 734
            +D+YA+FG V++A+ VFS MP KN+VSWSAMIAC+AKNG+P EA ++FR+MM     +LP
Sbjct: 221  IDVYARFGSVQNATCVFSQMPQKNMVSWSAMIACYAKNGKPLEAFDVFRDMMTHV--LLP 278

Query: 735  NSVTMVSVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLGENVF 914
            NSVTMVSV+QACAAL ALEQGKL+HGY++R GLDS+LPV++ALVTMYARCG L+LG  VF
Sbjct: 279  NSVTMVSVVQACAALGALEQGKLLHGYVVRKGLDSILPVLSALVTMYARCGALELGRRVF 338

Query: 915  NQMEKRDVVSWNSLISSYAIHGLGSKALATFQAMVQ 1022
            +QM KRDVV+WNS+ISSY IHG G+KA+ TF+ M++
Sbjct: 339  DQMGKRDVVAWNSMISSYGIHGFGAKAIETFREMIR 374



 Score =  120 bits (300), Expect = 1e-24
 Identities = 79/290 (27%), Positives = 147/290 (50%), Gaps = 4/290 (1%)
 Frame = +3

Query: 120  TYELLIQSCAQKKSISDAITVHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQVFDNI 299
            TY  ++++C    SI +   +H ++   G++    + T LI++YA  GSVQ A  VF  +
Sbjct: 182  TYTYVLKACVVA-SIPNHKEIHAHIFRHGYETHIHIMTTLIDVYARFGSVQNATCVFSQM 240

Query: 300  TDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMPSDRFTYTYVLKACVVSGSELSLS 479
              + +  W+A+    +  G   E   ++R M    +  +  T   V++AC   G+     
Sbjct: 241  PQKNMVSWSAMIACYAKNGKPLEAFDVFRDMMTHVLLPNSVTMVSVVQACAALGA----L 296

Query: 480  RRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWSAMIACF 659
             +GK +H  ++R+G ++ L +++ LV MYA+ G +E    VF  M  +++V+W++MI+ +
Sbjct: 297  EQGKLLHGYVVRKGLDSILPVLSALVTMYARCGALELGRRVFDQMGKRDVVAWNSMISSY 356

Query: 660  AKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQGKLIHGYIIRNGLDS 839
              +G   +A+E FREM+R  V   P+ ++ VSV+ AC+    +E+GK +   + +     
Sbjct: 357  GIHGFGAKAIETFREMIRHGVS--PSPISFVSVLGACSHAGLVEEGKQLFDSMWKE--HK 412

Query: 840  VLPVMN---ALVTMYARCGDLKLGENVFNQME-KRDVVSWNSLISSYAIH 977
            + P +     +V +  R   L+    +   M  +     W SL+ S  IH
Sbjct: 413  IYPSVEHYACMVDLLGRANQLEEAAIIIQDMRIEPGPKVWGSLLGSCRIH 462



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 45/200 (22%), Positives = 90/200 (45%), Gaps = 6/200 (3%)
 Frame = +3

Query: 42  IQSLCRKGKLKQAIHLLSDEEN----PTQHTYELLIQSCAQKKSISDAITVHKNLTEDGF 209
           I    + GK  +A  +  D       P   T   ++Q+CA   ++     +H  +   G 
Sbjct: 252 IACYAKNGKPLEAFDVFRDMMTHVLLPNSVTMVSVVQACAALGALEQGKLLHGYVVRKGL 311

Query: 210 DQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRR 389
           D    + + L+ MYA  G+++  R+VFD +  R +  WN++  +  + G G + +  +R 
Sbjct: 312 DSILPVLSALVTMYARCGALELGRRVFDQMGKRDVVAWNSMISSYGIHGFGAKAIETFRE 371

Query: 390 MNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLR--RGYETHLHIMTTLVDM 563
           M   G+     ++  VL AC    S   L   GK++   + +  + Y +  H    +VD+
Sbjct: 372 MIRHGVSPSPISFVSVLGAC----SHAGLVEEGKQLFDSMWKEHKIYPSVEH-YACMVDL 426

Query: 564 YAKFGRVESASLVFSSMPVK 623
             +  ++E A+++   M ++
Sbjct: 427 LGRANQLEEAAIIIQDMRIE 446


>ref|XP_004250510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Solanum lycopersicum]
          Length = 652

 Score =  454 bits (1168), Expect = e-125
 Identities = 221/330 (66%), Positives = 270/330 (81%)
 Frame = +3

Query: 33   NHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNLTEDGFD 212
            N SIQS C+KG+LKQA+ LLS E NP QHTYELLI SC++K S  D +TVH+ L +DGF+
Sbjct: 51   NDSIQSYCKKGELKQALQLLSQEPNPNQHTYELLILSCSEKNSFHDGLTVHRKLIDDGFE 110

Query: 213  QDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRM 392
            QDPFLATKLINMY+ L S+ +ARQVFD I +RTI++WNA FRAL+L G+G EVL+LY RM
Sbjct: 111  QDPFLATKLINMYSNLDSIDHARQVFDKINNRTIFLWNAFFRALTLAGNGVEVLKLYTRM 170

Query: 393  NLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAK 572
            N IG+ SDRFTYTYVLKAC V+    SL +  KE+HAQL R GY TH HIMTTL+D+YA+
Sbjct: 171  NSIGIISDRFTYTYVLKACAVA----SLPKH-KEIHAQLFRHGYHTHTHIMTTLIDVYAR 225

Query: 573  FGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMV 752
            FG VE+A+ VF  MP KN+VSWSAMI C+AKNG+P EA ++FR+MM     +LPNSVTMV
Sbjct: 226  FGYVENAACVFDQMPQKNMVSWSAMIGCYAKNGKPLEAFDVFRDMMNHV--LLPNSVTMV 283

Query: 753  SVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQMEKR 932
            SV+QACAAL ALEQGK++HGYI+R GLDS+LPV++ALVTMYARCG L+LG  VF+QM KR
Sbjct: 284  SVVQACAALGALEQGKVLHGYILRKGLDSILPVLSALVTMYARCGALELGRRVFDQMGKR 343

Query: 933  DVVSWNSLISSYAIHGLGSKALATFQAMVQ 1022
            DVV+WNS+ISSY IHG G KA+ TF+ M++
Sbjct: 344  DVVAWNSMISSYGIHGFGGKAIETFREMIR 373



 Score =  123 bits (308), Expect = 1e-25
 Identities = 85/305 (27%), Positives = 157/305 (51%), Gaps = 5/305 (1%)
 Frame = +3

Query: 78   AIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNLTEDGFDQDPFLATKLINMYAE 257
            +I ++SD     + TY  ++++CA   S+     +H  L   G+     + T LI++YA 
Sbjct: 172  SIGIISD-----RFTYTYVLKACAVA-SLPKHKEIHAQLFRHGYHTHTHIMTTLIDVYAR 225

Query: 258  LGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLYR-RMNLIGMPSDRFTYTY 434
             G V+ A  VFD +  + +  W+A+    +  G   E   ++R  MN + +P+   T   
Sbjct: 226  FGYVENAACVFDQMPQKNMVSWSAMIGCYAKNGKPLEAFDVFRDMMNHVLLPNS-VTMVS 284

Query: 435  VLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSM 614
            V++AC   G+      +GK +H  +LR+G ++ L +++ LV MYA+ G +E    VF  M
Sbjct: 285  VVQACAALGA----LEQGKVLHGYILRKGLDSILPVLSALVTMYARCGALELGRRVFDQM 340

Query: 615  PVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQ 794
              +++V+W++MI+ +  +G   +A+E FREM+R  V   P+ ++ VSV+ AC+    +E+
Sbjct: 341  GKRDVVAWNSMISSYGIHGFGGKAIETFREMIRHGVS--PSPISFVSVLGACSHAGLVEE 398

Query: 795  GKLIHGYIIRNGLDSVLPVMN---ALVTMYARCGDLKLGENVFNQME-KRDVVSWNSLIS 962
            GK +   +++    ++ P +     +V +  R   L+    +   M  +     W SL+ 
Sbjct: 399  GKELFDSMLKE--HNICPTVEHYACMVDLLGRANQLEEAAIIIQDMRIEPGPKVWGSLLG 456

Query: 963  SYAIH 977
            S  IH
Sbjct: 457  SCRIH 461


>ref|XP_006493448.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Citrus sinensis]
          Length = 662

 Score =  453 bits (1166), Expect = e-125
 Identities = 225/337 (66%), Positives = 270/337 (80%), Gaps = 2/337 (0%)
 Frame = +3

Query: 15   ISTTSKNHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNL 194
            +S+ +KN  IQSLC++G L+QA+ +LS E NPTQHTYELL+ SC    S+SDA+ VH +L
Sbjct: 47   LSSRNKNELIQSLCKQGNLRQALDVLSIEPNPTQHTYELLLLSCTHHNSLSDALNVHSHL 106

Query: 195  TEDGFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVL 374
            T++GFDQDPFL TKLIN+Y+   SV  AR VFD    RTIYVWNA+FRAL+L G GEEVL
Sbjct: 107  TDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALFRALTLAGRGEEVL 166

Query: 375  RLYRRMNLIG--MPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHIMT 548
             LYRRMN  G  + SDRFTYTYVLKACV S    SL + GKE+HA +LR GY   +HIMT
Sbjct: 167  ELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMT 226

Query: 549  TLVDMYAKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVDV 728
            TL+DMYA+FG V  A  VFS M VKN+VSWSAMIAC+A+NG  FEALELFREM+ ES D+
Sbjct: 227  TLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDL 286

Query: 729  LPNSVTMVSVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLGEN 908
             PNSVTMVSV+QACAAL+ALEQGK+IHGYI+R GLDS+LPV++ALVTMYARCG L+LG+ 
Sbjct: 287  CPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQC 346

Query: 909  VFNQMEKRDVVSWNSLISSYAIHGLGSKALATFQAMV 1019
            VF+ M+KRDVVSWNSLISSY +HG G KA+  F+ M+
Sbjct: 347  VFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMI 383



 Score =  122 bits (305), Expect = 3e-25
 Identities = 79/298 (26%), Positives = 149/298 (50%), Gaps = 12/298 (4%)
 Frame = +3

Query: 120  TYELLIQSCAQKKS----ISDAITVHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
            TY  ++++C         +     +H ++   G++    + T LI+MYA  G V YA  V
Sbjct: 185  TYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFV 244

Query: 288  FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIG--MPSDRFTYTYVLKACVVSG 461
            F  +  + +  W+A+    +  G   E L L+R M +    +  +  T   VL+AC    
Sbjct: 245  FSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAA-- 302

Query: 462  SELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWS 641
              L+   +GK +H  +LRRG ++ L +++ LV MYA+ G++E    VF  M  +++VSW+
Sbjct: 303  --LAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWN 360

Query: 642  AMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQGKLI----- 806
            ++I+ +  +G   +A+++F+EM+   V   P+ ++ VSV+ AC+    +E+GK++     
Sbjct: 361  SLISSYGVHGYGGKAIQIFKEMIYHGVS--PSPISFVSVLGACSHAGLVEEGKMLFESMR 418

Query: 807  HGYIIRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQME-KRDVVSWNSLISSYAIH 977
              ++IR  ++        +V +  R   L+    +   +  +     W SL+ S  IH
Sbjct: 419  KEHMIRPSVEHYA----CMVDLLGRANKLEEAAKIIEDLRIEPGPKVWGSLLGSCRIH 472



 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 41/201 (20%), Positives = 87/201 (43%), Gaps = 7/201 (3%)
 Frame = +3

Query: 42  IQSLCRKGKLKQAIHLL------SDEENPTQHTYELLIQSCAQKKSISDAITVHKNLTED 203
           I    R G   +A+ L       S +  P   T   ++Q+CA   ++     +H  +   
Sbjct: 260 IACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRR 319

Query: 204 GFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLY 383
           G D    + + L+ MYA  G ++  + VFD++  R +  WN++  +  + G G + ++++
Sbjct: 320 GLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIF 379

Query: 384 RRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRG-YETHLHIMTTLVD 560
           + M   G+     ++  VL AC    S   L   GK +   + +       +     +VD
Sbjct: 380 KEMIYHGVSPSPISFVSVLGAC----SHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVD 435

Query: 561 MYAKFGRVESASLVFSSMPVK 623
           +  +  ++E A+ +   + ++
Sbjct: 436 LLGRANKLEEAAKIIEDLRIE 456


>gb|EXC10733.1| hypothetical protein L484_025317 [Morus notabilis]
          Length = 659

 Score =  452 bits (1164), Expect = e-125
 Identities = 226/334 (67%), Positives = 270/334 (80%), Gaps = 1/334 (0%)
 Frame = +3

Query: 21   TTSKNHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNLTE 200
            T  KN  IQSLC++G L+QA+ LL  E NPTQHTYELLI SC + +S+S  + VH++L +
Sbjct: 47   TNDKNKLIQSLCKQGNLRQALKLLPHEPNPTQHTYELLILSCIRHESLSCGLQVHRHLVD 106

Query: 201  DGFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRL 380
            DG  QDPFLATKLINMY+EL S+  AR+VFD   +RTIYVWNA+FRAL+L G G +V  L
Sbjct: 107  DGSGQDPFLATKLINMYSELDSIDDARKVFDKTRNRTIYVWNAVFRALALAGHGMDVFEL 166

Query: 381  YRRMNLI-GMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHIMTTLV 557
            Y RMN   G+ SDRFTYTYVLKACV S S +SL R+GKE+HA +LRRG+E  +HIMTTLV
Sbjct: 167  YCRMNWSSGIESDRFTYTYVLKACVASESSISLLRKGKEIHAHVLRRGFEACVHIMTTLV 226

Query: 558  DMYAKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVDVLPN 737
            DMYA+FG V +AS VF  MP+KN+VSWSAMIAC+ KN RPFEALELF EM  E+ D LPN
Sbjct: 227  DMYARFGCVLNASCVFDEMPMKNVVSWSAMIACYVKNERPFEALELFWEMTLENRDSLPN 286

Query: 738  SVTMVSVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLGENVFN 917
            SVTMVSV+QACAA+ ALEQGKLIHGYI+R GLDS+LPVM+ LVTMYARCG L++G+ VF+
Sbjct: 287  SVTMVSVLQACAAIVALEQGKLIHGYILRRGLDSILPVMSTLVTMYARCGKLEIGQRVFD 346

Query: 918  QMEKRDVVSWNSLISSYAIHGLGSKALATFQAMV 1019
            QM+KRDVVSWNSLISSY IHG G KA+  F+ M+
Sbjct: 347  QMDKRDVVSWNSLISSYGIHGYGRKAIQIFKDMI 380



 Score =  124 bits (312), Expect = 5e-26
 Identities = 88/303 (29%), Positives = 152/303 (50%), Gaps = 11/303 (3%)
 Frame = +3

Query: 120  TYELLIQSC-AQKKSIS---DAITVHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
            TY  ++++C A + SIS       +H ++   GF+    + T L++MYA  G V  A  V
Sbjct: 182  TYTYVLKACVASESSISLLRKGKEIHAHVLRRGFEACVHIMTTLVDMYARFGCVLNASCV 241

Query: 288  FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMPS--DRFTYTYVLKACVVSG 461
            FD +  + +  W+A+           E L L+  M L    S  +  T   VL+AC    
Sbjct: 242  FDEMPMKNVVSWSAMIACYVKNERPFEALELFWEMTLENRDSLPNSVTMVSVLQACAA-- 299

Query: 462  SELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWS 641
              +    +GK +H  +LRRG ++ L +M+TLV MYA+ G++E    VF  M  +++VSW+
Sbjct: 300  --IVALEQGKLIHGYILRRGLDSILPVMSTLVTMYARCGKLEIGQRVFDQMDKRDVVSWN 357

Query: 642  AMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQGKLIHGYII 821
            ++I+ +  +G   +A+++F++M+   V   PN +T +SV+ AC+    + +GK++   + 
Sbjct: 358  SLISSYGIHGYGRKAIQIFKDMISNGVS--PNEITFISVLGACSHAGLVVEGKMLFDSMC 415

Query: 822  R-NGLDSVLPVMNALVTMYARCGDLKLGENVFNQME-KRDVVSWNSLISSYAIH---GLG 986
            R +G+   +     LV +  R   L     V   M  +     W +L+ S  IH   GL 
Sbjct: 416  REHGMYPSMEHYACLVDLLGRANRLDEAAKVVEDMRIEPGSKVWGALLGSCKIHCNVGLA 475

Query: 987  SKA 995
             +A
Sbjct: 476  ERA 478



 Score = 67.8 bits (164), Expect = 7e-09
 Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 2/183 (1%)
 Frame = +3

Query: 108 PTQHTYELLIQSCAQKKSISDAITVHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
           P   T   ++Q+CA   ++     +H  +   G D    + + L+ MYA  G ++  ++V
Sbjct: 285 PNSVTMVSVLQACAAIVALEQGKLIHGYILRRGLDSILPVMSTLVTMYARCGKLEIGQRV 344

Query: 288 FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMPSDRFTYTYVLKACVVSGSE 467
           FD +  R +  WN++  +  + G G + +++++ M   G+  +  T+  VL AC    S 
Sbjct: 345 FDQMDKRDVVSWNSLISSYGIHGYGRKAIQIFKDMISNGVSPNEITFISVLGAC----SH 400

Query: 468 LSLSRRGKEVHAQLLR-RGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVK-NLVSWS 641
             L   GK +   + R  G    +     LVD+  +  R++ A+ V   M ++     W 
Sbjct: 401 AGLVVEGKMLFDSMCREHGMYPSMEHYACLVDLLGRANRLDEAAKVVEDMRIEPGSKVWG 460

Query: 642 AMI 650
           A++
Sbjct: 461 ALL 463


>ref|XP_006290707.1| hypothetical protein CARUB_v10016805mg [Capsella rubella]
            gi|482559414|gb|EOA23605.1| hypothetical protein
            CARUB_v10016805mg [Capsella rubella]
          Length = 657

 Score =  452 bits (1163), Expect = e-124
 Identities = 219/331 (66%), Positives = 269/331 (81%)
 Frame = +3

Query: 27   SKNHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNLTEDG 206
            S N  IQSLC++GKLKQA+ +LS E +P+Q TYELLI  C    S SDA  VH+++ ++G
Sbjct: 48   SNNQLIQSLCKEGKLKQALRVLSQESSPSQQTYELLILCCGHHSSFSDARRVHRHILDNG 107

Query: 207  FDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLYR 386
            FDQDPFLATKLI MY++LGSV YAR+VFD    RTIYVWNA+FRAL+L G GEEVL LY 
Sbjct: 108  FDQDPFLATKLIGMYSDLGSVDYARKVFDKTHKRTIYVWNALFRALTLAGHGEEVLGLYW 167

Query: 387  RMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMY 566
            +MN IG+ SDRFTYTYVLKACV S    +   +GKE+HA L RRGY +H++IMTTL+DMY
Sbjct: 168  KMNRIGVESDRFTYTYVLKACVASECTANCLTKGKEIHAHLTRRGYNSHVYIMTTLLDMY 227

Query: 567  AKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVDVLPNSVT 746
            A+FG V+ AS VF+ MPVKN+VSWSAMIAC+AKNG+ FEAL  FREMM E+ D  PNSVT
Sbjct: 228  ARFGCVDYASYVFNGMPVKNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDASPNSVT 287

Query: 747  MVSVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQME 926
            MVSV+QACA+L+ALEQG+LIHGYI+R GLDS+LPV++ALVTMY RCG L++G+ VF++M+
Sbjct: 288  MVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMD 347

Query: 927  KRDVVSWNSLISSYAIHGLGSKALATFQAMV 1019
             RDVVSWNSLISSY +HG G KA+  F+ M+
Sbjct: 348  DRDVVSWNSLISSYGVHGYGRKAIQIFEEML 378



 Score =  131 bits (329), Expect = 5e-28
 Identities = 82/295 (27%), Positives = 147/295 (49%), Gaps = 8/295 (2%)
 Frame = +3

Query: 120  TYELLIQSCAQKKSISDAIT----VHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
            TY  ++++C   +  ++ +T    +H +LT  G++   ++ T L++MYA  G V YA  V
Sbjct: 180  TYTYVLKACVASECTANCLTKGKEIHAHLTRRGYNSHVYIMTTLLDMYARFGCVDYASYV 239

Query: 288  FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRM--NLIGMPSDRFTYTYVLKACVVSG 461
            F+ +  + +  W+A+    +  G   E LR +R M         +  T   VL+AC    
Sbjct: 240  FNGMPVKNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDASPNSVTMVSVLQAC---- 295

Query: 462  SELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWS 641
            + L+   +G+ +H  +LRRG ++ L +++ LV MY + G++E    VF  M  +++VSW+
Sbjct: 296  ASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMDDRDVVSWN 355

Query: 642  AMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQGK-LIHGYI 818
            ++I+ +  +G   +A+++F EM+       P  VT VSV+ AC+    +E+GK L     
Sbjct: 356  SLISSYGVHGYGRKAIQIFEEMLANG--ATPTPVTFVSVLGACSHEGLVEEGKRLFESMW 413

Query: 819  IRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQMEKRDVVS-WNSLISSYAIHG 980
              +G+   +     +V +  R   L     +   M        W SL+ S  IHG
Sbjct: 414  SDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 42/198 (21%), Positives = 85/198 (42%), Gaps = 7/198 (3%)
 Frame = +3

Query: 42  IQSLCRKGKLKQAIHLLSD------EENPTQHTYELLIQSCAQKKSISDAITVHKNLTED 203
           I    + GK  +A+    +      + +P   T   ++Q+CA   ++     +H  +   
Sbjct: 255 IACYAKNGKAFEALRTFREMMTETKDASPNSVTMVSVLQACASLAALEQGRLIHGYILRR 314

Query: 204 GFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLY 383
           G D    + + L+ MY   G ++  ++VFD + DR +  WN++  +  + G G + ++++
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMDDRDVVSWNSLISSYGVHGYGRKAIQIF 374

Query: 384 RRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLR-RGYETHLHIMTTLVD 560
             M   G      T+  VL AC    S   L   GK +   +    G +  +     +VD
Sbjct: 375 EEMLANGATPTPVTFVSVLGAC----SHEGLVEEGKRLFESMWSDHGIKPQVEHYACMVD 430

Query: 561 MYAKFGRVESASLVFSSM 614
           +  +  R++ A+ +   M
Sbjct: 431 LLGRANRLDEAAKMVQDM 448


>ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Cucumis sativus]
            gi|449474033|ref|XP_004154055.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Cucumis sativus]
            gi|449510921|ref|XP_004163811.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  450 bits (1157), Expect = e-124
 Identities = 216/332 (65%), Positives = 271/332 (81%)
 Frame = +3

Query: 24   TSKNHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNLTED 203
            ++ NH IQSLC++G LKQA++LLS E NPTQ T ELLI S A++ S+SDA+ VH+ L + 
Sbjct: 39   SNNNHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDG 98

Query: 204  GFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLY 383
            GFDQDPFLATKLINM++EL +V  AR+VFD    RTIYVWNA+FRAL+L G G +VL LY
Sbjct: 99   GFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELY 158

Query: 384  RRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDM 563
             RMN++G+ SDRFTYTY+LKACV S   +S  ++GKE+HA +LR GY  H+H+MTTL+DM
Sbjct: 159  PRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDM 218

Query: 564  YAKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVDVLPNSV 743
            YA+FG V  AS VF  MPVKN+VSWSAMIAC+AKNG+P+EALELFREMM  + D +PNSV
Sbjct: 219  YARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSV 278

Query: 744  TMVSVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQM 923
            TMVSV+QACAA +ALEQGKLIH YI+R GLDS+LPV++AL+TMYARCG L+ G+ +F++M
Sbjct: 279  TMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRM 338

Query: 924  EKRDVVSWNSLISSYAIHGLGSKALATFQAMV 1019
             K+DVV WNSLISSY +HG G KA+  F+ M+
Sbjct: 339  HKKDVVLWNSLISSYGLHGYGRKAIKIFEEMI 370



 Score =  128 bits (322), Expect = 3e-27
 Identities = 79/294 (26%), Positives = 147/294 (50%), Gaps = 8/294 (2%)
 Frame = +3

Query: 120  TYELLIQSCAQKKSISDAIT----VHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
            TY  L+++C   + +   +     +H ++   G+     + T L++MYA  G V YA  V
Sbjct: 172  TYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAV 231

Query: 288  FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMPS--DRFTYTYVLKACVVSG 461
            FD +  + +  W+A+    +  G   E L L+R M L    S  +  T   VL+AC    
Sbjct: 232  FDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAA-- 289

Query: 462  SELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWS 641
               +   +GK +HA +LRRG ++ L +++ L+ MYA+ G++ES  L+F  M  K++V W+
Sbjct: 290  --FAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWN 347

Query: 642  AMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQG-KLIHGYI 818
            ++I+ +  +G   +A+++F EM+       P+ ++ +SV+ AC+    +E+G KL    +
Sbjct: 348  SLISSYGLHGYGRKAIKIFEEMIDHGFS--PSHISFISVLGACSHTGLVEEGKKLFESMV 405

Query: 819  IRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQME-KRDVVSWNSLISSYAIH 977
              +G+   +     +V +  R   L     +   +  +     W SL+ +  IH
Sbjct: 406  KEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIH 459



 Score = 67.4 bits (163), Expect = 9e-09
 Identities = 41/201 (20%), Positives = 90/201 (44%), Gaps = 7/201 (3%)
 Frame = +3

Query: 42  IQSLCRKGKLKQAIHLLSD------EENPTQHTYELLIQSCAQKKSISDAITVHKNLTED 203
           I    + GK  +A+ L  +      +  P   T   ++Q+CA   ++     +H  +   
Sbjct: 247 IACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRR 306

Query: 204 GFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLY 383
           G D    + + LI MYA  G ++  + +FD +  + + +WN++  +  L G G + ++++
Sbjct: 307 GLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIF 366

Query: 384 RRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLR-RGYETHLHIMTTLVD 560
             M   G      ++  VL AC    S   L   GK++   +++  G +  +     +VD
Sbjct: 367 EEMIDHGFSPSHISFISVLGAC----SHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVD 422

Query: 561 MYAKFGRVESASLVFSSMPVK 623
           +  +  R++ A+ +   + ++
Sbjct: 423 LLGRANRLDEAAKIIEDLRIE 443


>ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
            lyrata] gi|297323351|gb|EFH53772.1| hypothetical protein
            ARALYDRAFT_905886 [Arabidopsis lyrata subsp. lyrata]
          Length = 657

 Score =  448 bits (1153), Expect = e-123
 Identities = 217/331 (65%), Positives = 267/331 (80%)
 Frame = +3

Query: 27   SKNHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNLTEDG 206
            S N  IQSLC++GKLKQA+ +LS E +P+Q TYELLI  C  + S+SD + VH+++ ++G
Sbjct: 48   SNNQLIQSLCKEGKLKQALRVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNG 107

Query: 207  FDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLYR 386
             DQDPFLATKLI MY++LGSV YAR+VFD    RTIYVWNA+FRAL+L G GEEVL LY 
Sbjct: 108  SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYW 167

Query: 387  RMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMY 566
            +MN IG+ SDRFTYTYVLKACV S        +GKE+HA L RRGY +H++IMTTLVDMY
Sbjct: 168  KMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMY 227

Query: 567  AKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVDVLPNSVT 746
            A+FG V+ AS VF+ MPV+N+VSWSAMIAC+AKNG+ FEAL  FREMM E+ D  PNSVT
Sbjct: 228  ARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVT 287

Query: 747  MVSVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQME 926
            MVSV+QACA+L+ALEQG+LIHGYI+R GLDS+LPV++ALVTMY RCG L +G+ VF++M 
Sbjct: 288  MVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMH 347

Query: 927  KRDVVSWNSLISSYAIHGLGSKALATFQAMV 1019
             RDVVSWNSLISSY +HG G KA+  F+ M+
Sbjct: 348  DRDVVSWNSLISSYGVHGYGRKAIQIFEEML 378



 Score =  134 bits (337), Expect = 6e-29
 Identities = 84/295 (28%), Positives = 150/295 (50%), Gaps = 8/295 (2%)
 Frame = +3

Query: 120  TYELLIQSCAQKKSISDAIT----VHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
            TY  ++++C   +  +D +T    +H +LT  G++   ++ T L++MYA  G V YA  V
Sbjct: 180  TYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYV 239

Query: 288  FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMPS--DRFTYTYVLKACVVSG 461
            F+ +  R +  W+A+    +  G   E LR +R M      S  +  T   VL+AC    
Sbjct: 240  FNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQAC---- 295

Query: 462  SELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWS 641
            + L+   +G+ +H  +LRRG ++ L +++ LV MY + G+++    VF  M  +++VSW+
Sbjct: 296  ASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWN 355

Query: 642  AMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQGKLIHGYII 821
            ++I+ +  +G   +A+++F EM+       P  VT VSV+ AC+    +E+GK +   + 
Sbjct: 356  SLISSYGVHGYGRKAIQIFEEMLANGAS--PTPVTFVSVLGACSHEGLVEEGKRLFESMW 413

Query: 822  R-NGLDSVLPVMNALVTMYARCGDLKLGENVFNQMEKRDVVS-WNSLISSYAIHG 980
            R +G+   +     +V +  R   L     +   M        W SL+ S  IHG
Sbjct: 414  RDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468



 Score = 67.4 bits (163), Expect = 9e-09
 Identities = 43/198 (21%), Positives = 85/198 (42%), Gaps = 7/198 (3%)
 Frame = +3

Query: 42  IQSLCRKGKLKQAIHLLSD------EENPTQHTYELLIQSCAQKKSISDAITVHKNLTED 203
           I    + GK  +A+    +      + +P   T   ++Q+CA   ++     +H  +   
Sbjct: 255 IACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRR 314

Query: 204 GFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLY 383
           G D    + + L+ MY   G +   ++VFD + DR +  WN++  +  + G G + ++++
Sbjct: 315 GLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIF 374

Query: 384 RRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLR-RGYETHLHIMTTLVD 560
             M   G      T+  VL AC    S   L   GK +   + R  G +  +     +VD
Sbjct: 375 EEMLANGASPTPVTFVSVLGAC----SHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVD 430

Query: 561 MYAKFGRVESASLVFSSM 614
           +  +  R++ A+ +   M
Sbjct: 431 LLGRANRLDEAAKMVQDM 448


>ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Glycine max]
          Length = 658

 Score =  446 bits (1148), Expect = e-123
 Identities = 215/331 (64%), Positives = 267/331 (80%)
 Frame = +3

Query: 27   SKNHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNLTEDG 206
            + N  IQSLC+ G LKQAIHLL  E NPTQ T+E LI SCAQ+ S+SD + VH+ L   G
Sbjct: 49   NNNQLIQSLCKGGNLKQAIHLLCCEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSG 108

Query: 207  FDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLYR 386
            FDQDPFLATKLINMY ELGS+  AR+VFD   +RTIYVWNA+FRAL+++G G+E+L LY 
Sbjct: 109  FDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYV 168

Query: 387  RMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMY 566
            +MN IG+PSDRFTYT+VLKACVVS   +S  ++GKE+HA +LR GYE ++H+MTTL+D+Y
Sbjct: 169  QMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVY 228

Query: 567  AKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVDVLPNSVT 746
            AKFG V  A+ VF +MP KN VSWSAMIACFAKN  P +ALELF+ MM E+ D +PNSVT
Sbjct: 229  AKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVT 288

Query: 747  MVSVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQME 926
            MV+V+QACA L+ALEQGKLIHGYI+R GLDS+LPV+NAL+TMY RCG++ +G+ VF+ M+
Sbjct: 289  MVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMK 348

Query: 927  KRDVVSWNSLISSYAIHGLGSKALATFQAMV 1019
             RDVVSWNSLIS Y +HG G KA+  F+ M+
Sbjct: 349  NRDVVSWNSLISIYGMHGFGKKAIQIFENMI 379



 Score =  108 bits (271), Expect = 3e-21
 Identities = 74/297 (24%), Positives = 149/297 (50%), Gaps = 11/297 (3%)
 Frame = +3

Query: 120  TYELLIQSCAQKK----SISDAITVHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
            TY  ++++C   +     +     +H ++   G++ +  + T L+++YA+ GSV YA  V
Sbjct: 181  TYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSV 240

Query: 288  FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMPS--DRFTYTYVLKACVVSG 461
            F  +  +    W+A+    +      + L L++ M L    S  +  T   VL+AC    
Sbjct: 241  FCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQAC---- 296

Query: 462  SELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWS 641
            + L+   +GK +H  +LRRG ++ L ++  L+ MY + G +     VF +M  +++VSW+
Sbjct: 297  AGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWN 356

Query: 642  AMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQGK-----LI 806
            ++I+ +  +G   +A+++F  M+ +     P+ ++ ++V+ AC+    +E+GK     ++
Sbjct: 357  SLISIYGMHGFGKKAIQIFENMIHQGSS--PSYISFITVLGACSHAGLVEEGKILFESML 414

Query: 807  HGYIIRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQMEKRDVVSWNSLISSYAIH 977
              Y I  G++    +++ L         +KL E++    E    V W SL+ S  IH
Sbjct: 415  SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM--HFEPGPTV-WGSLLGSCRIH 468



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 2/185 (1%)
 Frame = +3

Query: 66  KLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNLTEDGFDQDPFLATKLIN 245
           +L Q + L + +  P   T   ++Q+CA   ++     +H  +   G D    +   LI 
Sbjct: 270 ELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALIT 329

Query: 246 MYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMPSDRFT 425
           MY   G +   ++VFDN+ +R +  WN++     + G G++ ++++  M   G      +
Sbjct: 330 MYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYIS 389

Query: 426 YTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETH--LHIMTTLVDMYAKFGRVESASL 599
           +  VL AC    S   L   GK +   +L + Y  H  +     +VD+  +  R++ A  
Sbjct: 390 FITVLGAC----SHAGLVEEGKILFESMLSK-YRIHPGMEHYACMVDLLGRANRLDEAIK 444

Query: 600 VFSSM 614
           +   M
Sbjct: 445 LIEDM 449


>ref|XP_007139395.1| hypothetical protein PHAVU_008G025900g [Phaseolus vulgaris]
            gi|561012528|gb|ESW11389.1| hypothetical protein
            PHAVU_008G025900g [Phaseolus vulgaris]
          Length = 658

 Score =  446 bits (1146), Expect = e-123
 Identities = 213/332 (64%), Positives = 265/332 (79%)
 Frame = +3

Query: 24   TSKNHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNLTED 203
            T  N  IQSLC+ G LKQAIHLL  E NPTQ T+E LI SCAQ+ S+SD + +H++LT  
Sbjct: 48   TDNNQLIQSLCKGGSLKQAIHLLLYETNPTQQTFEHLIYSCAQQNSLSDGLHIHRHLTNR 107

Query: 204  GFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLY 383
            GFDQDPFLATKLINMY ELGS+  AR+VFD   +RTIYVWNA+FRAL+++G GEE+L LY
Sbjct: 108  GFDQDPFLATKLINMYYELGSIDRARKVFDETLERTIYVWNALFRALAMVGRGEELLDLY 167

Query: 384  RRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDM 563
             +MN  G+PSDRFTYTYVLKACVVS   +    +GKE+HA +LR GYE ++H+MTTL+D+
Sbjct: 168  AQMNSTGVPSDRFTYTYVLKACVVSELSVCPLWKGKEIHAHILRHGYEANVHVMTTLLDV 227

Query: 564  YAKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVDVLPNSV 743
            YA+FG V  A+ VF +MP KN VSWSAMIACFAKN  P +ALELF+ MM E+ D +PNSV
Sbjct: 228  YARFGSVSDANSVFCAMPAKNFVSWSAMIACFAKNDMPMKALELFQLMMLEAGDSVPNSV 287

Query: 744  TMVSVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQM 923
            TMVSV+QAC  L+ALEQGKLIHGYI+R GLDS+LPV++AL+TMY RCG++ +G+ VF+ M
Sbjct: 288  TMVSVLQACGGLAALEQGKLIHGYILRRGLDSILPVLSALITMYGRCGEISMGQRVFDSM 347

Query: 924  EKRDVVSWNSLISSYAIHGLGSKALATFQAMV 1019
            + RDV+SWNSLIS Y +HG G KA+  F+ M+
Sbjct: 348  KNRDVISWNSLISIYGMHGFGKKAIQIFENMI 379



 Score =  107 bits (267), Expect = 8e-21
 Identities = 75/297 (25%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
 Frame = +3

Query: 120  TYELLIQSCAQKK----SISDAITVHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
            TY  ++++C   +     +     +H ++   G++ +  + T L+++YA  GSV  A  V
Sbjct: 181  TYTYVLKACVVSELSVCPLWKGKEIHAHILRHGYEANVHVMTTLLDVYARFGSVSDANSV 240

Query: 288  FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMPS--DRFTYTYVLKACVVSG 461
            F  +  +    W+A+    +      + L L++ M L    S  +  T   VL+AC    
Sbjct: 241  FCAMPAKNFVSWSAMIACFAKNDMPMKALELFQLMMLEAGDSVPNSVTMVSVLQAC---- 296

Query: 462  SELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWS 641
              L+   +GK +H  +LRRG ++ L +++ L+ MY + G +     VF SM  ++++SW+
Sbjct: 297  GGLAALEQGKLIHGYILRRGLDSILPVLSALITMYGRCGEISMGQRVFDSMKNRDVISWN 356

Query: 642  AMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQGKLI----- 806
            ++I+ +  +G   +A+++F  M+ + V   P+ ++ ++V+ AC     +E+GK++     
Sbjct: 357  SLISIYGMHGFGKKAIQIFENMIHQGVS--PSYISFITVLGACGHAGLVEEGKILFESMP 414

Query: 807  HGYIIRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQMEKRDVVSWNSLISSYAIH 977
              Y I  G++    V++ L         +KL E++    E    V W SL+ S  IH
Sbjct: 415  SKYRIDPGMEHYACVVDLLGRANRLDEAIKLIEDM--HFEPGPTV-WGSLLGSCRIH 468


>ref|XP_004491940.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Cicer arietinum]
          Length = 661

 Score =  443 bits (1139), Expect = e-122
 Identities = 213/333 (63%), Positives = 263/333 (78%)
 Frame = +3

Query: 21   TTSKNHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNLTE 200
            T + N  IQSLCR G LKQAI +L  E NPTQ T+E+LI SCAQ  S+SD + VH  L  
Sbjct: 50   TNNNNDLIQSLCRGGNLKQAIQVLCTEPNPTQKTFEVLICSCAQHNSLSDGLDVHHRLVG 109

Query: 201  DGFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRL 380
            +G DQDPFLATKLINMY ELGSV +A +VFD   ++TIYVWNA+FRAL++LG GEE+L L
Sbjct: 110  NGLDQDPFLATKLINMYCELGSVDHACKVFDETQEKTIYVWNALFRALAMLGRGEELLDL 169

Query: 381  YRRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHIMTTLVD 560
            Y +MN IG+PS+RFTYTY LKACVVS   +   R+GKE+HA +LR GYE H+H+MTTL+D
Sbjct: 170  YGQMNWIGIPSNRFTYTYALKACVVSELSICSFRKGKEIHAHILRHGYEGHVHVMTTLLD 229

Query: 561  MYAKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVDVLPNS 740
            +YAKFG +  AS VF +MP KN+VSWSAMIAC+AKN  P +ALELF+ MM E+ D +PN 
Sbjct: 230  VYAKFGCISYASFVFGAMPAKNIVSWSAMIACYAKNEMPVKALELFQLMMLEACDSVPNP 289

Query: 741  VTMVSVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQ 920
            VTMVSV+QACA+L+ALE GKL+HGYIIR GLDS+LPV+N L+TMY RCG++  G+ VF+ 
Sbjct: 290  VTMVSVLQACASLAALEHGKLVHGYIIRKGLDSILPVLNTLITMYGRCGEISTGQRVFDY 349

Query: 921  MEKRDVVSWNSLISSYAIHGLGSKALATFQAMV 1019
            M+KRDVVSWNSLIS Y +HG G KA+  F+ M+
Sbjct: 350  MKKRDVVSWNSLISIYGMHGFGKKAIQIFENMI 382



 Score =  110 bits (274), Expect = 1e-21
 Identities = 71/296 (23%), Positives = 142/296 (47%), Gaps = 10/296 (3%)
 Frame = +3

Query: 120  TYELLIQSCAQKK----SISDAITVHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
            TY   +++C   +    S      +H ++   G++    + T L+++YA+ G + YA  V
Sbjct: 184  TYTYALKACVVSELSICSFRKGKEIHAHILRHGYEGHVHVMTTLLDVYAKFGCISYASFV 243

Query: 288  FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMPS--DRFTYTYVLKACVVSG 461
            F  +  + I  W+A+    +      + L L++ M L    S  +  T   VL+AC    
Sbjct: 244  FGAMPAKNIVSWSAMIACYAKNEMPVKALELFQLMMLEACDSVPNPVTMVSVLQAC---- 299

Query: 462  SELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWS 641
            + L+    GK VH  ++R+G ++ L ++ TL+ MY + G + +   VF  M  +++VSW+
Sbjct: 300  ASLAALEHGKLVHGYIIRKGLDSILPVLNTLITMYGRCGEISTGQRVFDYMKKRDVVSWN 359

Query: 642  AMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQGKLIHGYII 821
            ++I+ +  +G   +A+++F  M+   V   P+ ++ ++++ AC+    +E+GK++   ++
Sbjct: 360  SLISIYGMHGFGKKAIQIFENMIHNGVS--PSYISFITILCACSHAGLVEEGKILFESML 417

Query: 822  RNGLDSVLPVMNALVTMYARCGDLKLGENVFNQMEKRDV----VSWNSLISSYAIH 977
                  + P M     M    G   + +     +E  D       W SL+ S  IH
Sbjct: 418  SK--YRIRPRMEHYACMVDLLGRANMFDEAMKLIEDMDFEPGQTVWGSLLGSCRIH 471


>ref|XP_006418855.1| hypothetical protein EUTSA_v10002433mg [Eutrema salsugineum]
            gi|557096783|gb|ESQ37291.1| hypothetical protein
            EUTSA_v10002433mg [Eutrema salsugineum]
          Length = 659

 Score =  442 bits (1136), Expect = e-121
 Identities = 215/332 (64%), Positives = 269/332 (81%), Gaps = 1/332 (0%)
 Frame = +3

Query: 27   SKNHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNLTEDG 206
            S N  IQSLC++G LKQA+ +LS E +P+Q TYELLI+ C  + S+SDA+ VH+++ ++G
Sbjct: 49   SNNQLIQSLCKEGNLKQALRVLSQESSPSQQTYELLIRCCGHRSSLSDALRVHRHILDNG 108

Query: 207  FDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLYR 386
             DQDPFLATKLI MY++LGSV +AR+VFD    RTIYVWNA+FRAL+L G GEEVL LY 
Sbjct: 109  SDQDPFLATKLIGMYSDLGSVDHARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYW 168

Query: 387  RMNLIGMPSDRFTYTYVLKACVVSGS-ELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDM 563
            +MN IG+ SDRFTYTYVLKACV S         +GKE+HA L RRGY +H++IMTTL+DM
Sbjct: 169  KMNRIGVESDRFTYTYVLKACVASPECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLLDM 228

Query: 564  YAKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVDVLPNSV 743
            YA+FG V+ AS VF  MPV+N+VSWSAMIAC+AKNG+ FEAL  FREMM E+ D  PNSV
Sbjct: 229  YARFGCVDYASHVFDEMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSV 288

Query: 744  TMVSVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQM 923
            TMVSV+QACA+L+ALEQG+LIHGYI+R GLDS+LPV++ALVTMY RCG L++G+ VF++M
Sbjct: 289  TMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGRLEVGQRVFDRM 348

Query: 924  EKRDVVSWNSLISSYAIHGLGSKALATFQAMV 1019
             +RDVVSWNSLISSY +HG G KA+  F+ M+
Sbjct: 349  HERDVVSWNSLISSYGVHGYGRKAIQIFEEML 380



 Score =  135 bits (341), Expect = 2e-29
 Identities = 88/296 (29%), Positives = 151/296 (51%), Gaps = 9/296 (3%)
 Frame = +3

Query: 120  TYELLIQSC-AQKKSISDAIT----VHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQ 284
            TY  ++++C A  +  +D +T    +H +LT  G++   ++ T L++MYA  G V YA  
Sbjct: 181  TYTYVLKACVASPECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLLDMYARFGCVDYASH 240

Query: 285  VFDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMPS--DRFTYTYVLKACVVS 458
            VFD +  R +  W+A+    +  G   E LR +R M      S  +  T   VL+AC   
Sbjct: 241  VFDEMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQAC--- 297

Query: 459  GSELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSW 638
             + L+   +G+ +H  +LRRG ++ L +++ LV MY + GR+E    VF  M  +++VSW
Sbjct: 298  -ASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGRLEVGQRVFDRMHERDVVSW 356

Query: 639  SAMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQGKLIHGYI 818
            +++I+ +  +G   +A+++F EM+       P  VT VSV+ AC+    +E+GK +   +
Sbjct: 357  NSLISSYGVHGYGRKAIQIFEEMLANGAS--PTPVTFVSVLGACSHEGLVEEGKRLFESM 414

Query: 819  IR-NGLDSVLPVMNALVTMYARCGDLKLGENVFNQMEKRDVVS-WNSLISSYAIHG 980
             R +G+   +     +V +  R   L     +   M        W SL+ S  IHG
Sbjct: 415  WRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 470



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 42/198 (21%), Positives = 86/198 (43%), Gaps = 7/198 (3%)
 Frame = +3

Query: 42  IQSLCRKGKLKQAIHLLSD------EENPTQHTYELLIQSCAQKKSISDAITVHKNLTED 203
           I    + GK  +A+    +      + +P   T   ++Q+CA   ++     +H  +   
Sbjct: 257 IACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRR 316

Query: 204 GFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLY 383
           G D    + + L+ MY   G ++  ++VFD + +R +  WN++  +  + G G + ++++
Sbjct: 317 GLDSILPVISALVTMYGRCGRLEVGQRVFDRMHERDVVSWNSLISSYGVHGYGRKAIQIF 376

Query: 384 RRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLR-RGYETHLHIMTTLVD 560
             M   G      T+  VL AC    S   L   GK +   + R  G +  +     +VD
Sbjct: 377 EEMLANGASPTPVTFVSVLGAC----SHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVD 432

Query: 561 MYAKFGRVESASLVFSSM 614
           +  +  R++ A+ +   M
Sbjct: 433 LLGRANRLDEAAKMVQDM 450


>ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Glycine max]
          Length = 658

 Score =  439 bits (1128), Expect = e-120
 Identities = 212/332 (63%), Positives = 265/332 (79%)
 Frame = +3

Query: 24   TSKNHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNLTED 203
            ++ N  IQSLC+ G LKQA+HLL  E NPTQ T+E LI SCAQK S+S  + VH+ L + 
Sbjct: 48   SNNNQLIQSLCKGGNLKQALHLLCCEPNPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDS 107

Query: 204  GFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLY 383
            GFDQDPFLATKLINMY ELGS+  A +VFD   +RTIYVWNA+FRAL+++G G+E+L LY
Sbjct: 108  GFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDLY 167

Query: 384  RRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDM 563
             +MN IG PSDRFTYTYVLKACVVS   +   R+GKE+HA +LR GYE ++H+MTTL+D+
Sbjct: 168  IQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDV 227

Query: 564  YAKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVDVLPNSV 743
            YAKFG V  A+ VF +MP KN VSWSAMIACFAKN  P +ALELF+ MM E+ + +PNSV
Sbjct: 228  YAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSV 287

Query: 744  TMVSVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQM 923
            TMV+++QACA L+ALEQGKLIHGYI+R  LDS+LPV+NAL+TMY RCG++ +G+ VF+ M
Sbjct: 288  TMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNM 347

Query: 924  EKRDVVSWNSLISSYAIHGLGSKALATFQAMV 1019
            +KRDVVSWNSLIS Y +HG G KA+  F+ M+
Sbjct: 348  KKRDVVSWNSLISIYGMHGFGKKAIQIFENMI 379



 Score =  105 bits (262), Expect = 3e-20
 Identities = 73/297 (24%), Positives = 148/297 (49%), Gaps = 11/297 (3%)
 Frame = +3

Query: 120  TYELLIQSCAQKK----SISDAITVHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
            TY  ++++C   +     +     +H ++   G++ +  + T L+++YA+ GSV YA  V
Sbjct: 181  TYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSV 240

Query: 288  FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMPS--DRFTYTYVLKACVVSG 461
            F  +  +    W+A+    +      + L L++ M      S  +  T   +L+AC    
Sbjct: 241  FCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQAC---- 296

Query: 462  SELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWS 641
            + L+   +GK +H  +LRR  ++ L ++  L+ MY + G V     VF +M  +++VSW+
Sbjct: 297  AGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWN 356

Query: 642  AMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQGK-----LI 806
            ++I+ +  +G   +A+++F  M+ + V   P+ ++ ++V+ AC+    +E+GK     ++
Sbjct: 357  SLISIYGMHGFGKKAIQIFENMIHQGVS--PSYISFITVLGACSHAGLVEEGKILFESML 414

Query: 807  HGYIIRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQMEKRDVVSWNSLISSYAIH 977
              Y I  G++    +++ L         +KL E++    E    V W SL+ S  IH
Sbjct: 415  SKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDM--HFEPGPTV-WGSLLGSCRIH 468



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 2/171 (1%)
 Frame = +3

Query: 108 PTQHTYELLIQSCAQKKSISDAITVHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
           P   T   ++Q+CA   ++     +H  +     D    +   LI MY   G V   ++V
Sbjct: 284 PNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRV 343

Query: 288 FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMPSDRFTYTYVLKACVVSGSE 467
           FDN+  R +  WN++     + G G++ ++++  M   G+     ++  VL AC    S 
Sbjct: 344 FDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGAC----SH 399

Query: 468 LSLSRRGKEVHAQLLRRGYETH--LHIMTTLVDMYAKFGRVESASLVFSSM 614
             L   GK +   +L + Y  H  +     +VD+  +  R+  A  +   M
Sbjct: 400 AGLVEEGKILFESMLSK-YRIHPGMEHYACMVDLLGRANRLGEAIKLIEDM 449


>ref|XP_004307227.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 776

 Score =  434 bits (1117), Expect = e-119
 Identities = 209/331 (63%), Positives = 262/331 (79%)
 Frame = +3

Query: 27   SKNHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNLTEDG 206
            +KN  IQSLC +G LK A+ L   E NP+Q T ELLI SC ++ S+ D + VH++L   G
Sbjct: 167  NKNQLIQSLCNQGDLKLALQLFPHEPNPSQQTCELLILSCIRQDSLPDGLDVHRHLVNGG 226

Query: 207  FDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLYR 386
            +DQDPFLATKLI MY+EL S++ AR+VFD    RTIY+WNA+FRAL+L G G EVL LYR
Sbjct: 227  WDQDPFLATKLIEMYSELDSIENAREVFDKTHKRTIYMWNALFRALTLAGHGTEVLNLYR 286

Query: 387  RMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMY 566
            +MN IG+PSDRFTYTYVLKACVVS    SL ++GKE+H  +LR GY  H+H+ TTL+DMY
Sbjct: 287  QMNAIGVPSDRFTYTYVLKACVVSECSSSLLQKGKEIHGHILRHGYGAHVHVTTTLLDMY 346

Query: 567  AKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVDVLPNSVT 746
            A+FG V  AS VF  M  +N+VSWSAMIAC+AKN RP+EA ELFR+M+ E+ D+ PNSVT
Sbjct: 347  ARFGCVSYASSVFDQMQNRNVVSWSAMIACYAKNARPYEAWELFRKMILEAPDMFPNSVT 406

Query: 747  MVSVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQME 926
            MVSV+QACAAL+ALEQGK IHGYI+R GLDS LPVM++L+TMYARCG L+L + VFN+++
Sbjct: 407  MVSVLQACAALAALEQGKFIHGYILRRGLDSTLPVMSSLITMYARCGKLELAQQVFNKIK 466

Query: 927  KRDVVSWNSLISSYAIHGLGSKALATFQAMV 1019
            ++DVVSWNSLISSY IHG G +A+  F+ M+
Sbjct: 467  RKDVVSWNSLISSYGIHGYGKRAIQVFEDMI 497



 Score =  135 bits (339), Expect = 4e-29
 Identities = 84/295 (28%), Positives = 154/295 (52%), Gaps = 8/295 (2%)
 Frame = +3

Query: 120  TYELLIQSCAQKKSISDAIT----VHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
            TY  ++++C   +  S  +     +H ++   G+     + T L++MYA  G V YA  V
Sbjct: 299  TYTYVLKACVVSECSSSLLQKGKEIHGHILRHGYGAHVHVTTTLLDMYARFGCVSYASSV 358

Query: 288  FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIG--MPSDRFTYTYVLKACVVSG 461
            FD + +R +  W+A+    +      E   L+R+M L    M  +  T   VL+AC    
Sbjct: 359  FDQMQNRNVVSWSAMIACYAKNARPYEAWELFRKMILEAPDMFPNSVTMVSVLQACAA-- 416

Query: 462  SELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWS 641
              L+   +GK +H  +LRRG ++ L +M++L+ MYA+ G++E A  VF+ +  K++VSW+
Sbjct: 417  --LAALEQGKFIHGYILRRGLDSTLPVMSSLITMYARCGKLELAQQVFNKIKRKDVVSWN 474

Query: 642  AMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQGKLIHGYII 821
            ++I+ +  +G    A+++F +M+   V   P+ ++ VSV+ AC+    +E+GK+I   ++
Sbjct: 475  SLISSYGIHGYGKRAIQVFEDMIDHGVS--PSYISFVSVLGACSHEGLVEEGKVIFQSMV 532

Query: 822  R-NGLDSVLPVMNALVTMYARCGDLKLGENVFNQME-KRDVVSWNSLISSYAIHG 980
            R +GL   +     +V +  R   L     + + M  +     W +L+ S  IHG
Sbjct: 533  REHGLYPSIEQYACMVDLLGRANRLDEAAKIIDNMRIEPGAQVWGALLGSCRIHG 587



 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 2/183 (1%)
 Frame = +3

Query: 108 PTQHTYELLIQSCAQKKSISDAITVHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
           P   T   ++Q+CA   ++     +H  +   G D    + + LI MYA  G ++ A+QV
Sbjct: 402 PNSVTMVSVLQACAALAALEQGKFIHGYILRRGLDSTLPVMSSLITMYARCGKLELAQQV 461

Query: 288 FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMPSDRFTYTYVLKACVVSGSE 467
           F+ I  + +  WN++  +  + G G+  ++++  M   G+     ++  VL AC    S 
Sbjct: 462 FNKIKRKDVVSWNSLISSYGIHGYGKRAIQVFEDMIDHGVSPSYISFVSVLGAC----SH 517

Query: 468 LSLSRRGKEVHAQLLR-RGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVK-NLVSWS 641
             L   GK +   ++R  G    +     +VD+  +  R++ A+ +  +M ++     W 
Sbjct: 518 EGLVEEGKVIFQSMVREHGLYPSIEQYACMVDLLGRANRLDEAAKIIDNMRIEPGAQVWG 577

Query: 642 AMI 650
           A++
Sbjct: 578 ALL 580


>ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical
            [Medicago truncatula] gi|355496564|gb|AES77767.1|
            Pentatricopeptide repeat-containing protein [Medicago
            truncatula]
          Length = 654

 Score =  427 bits (1099), Expect = e-117
 Identities = 203/338 (60%), Positives = 262/338 (77%)
 Frame = +3

Query: 6    TVPISTTSKNHSIQSLCRKGKLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVH 185
            T  I + + +  IQSLCR G LKQA+ LL  E NPT+ T+ELLI SC ++ S+SD + VH
Sbjct: 38   TKDIKSNNNDDLIQSLCRGGNLKQAVQLLCCEPNPTKKTFELLINSCIEQNSLSDGVDVH 97

Query: 186  KNLTEDGFDQDPFLATKLINMYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGE 365
              L   G DQDP+LATKLINMY +LGSV +A +VFD   ++TI+VWNAIFRAL++   GE
Sbjct: 98   HRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGE 157

Query: 366  EVLRLYRRMNLIGMPSDRFTYTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETHLHIM 545
            ++L LY +MN IG+PS+RFTYTYVLKACVVS   +   R+GKE+HA +LR GYE H+H+M
Sbjct: 158  DLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVM 217

Query: 546  TTLVDMYAKFGRVESASLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMRESVD 725
            TTL+D+YA+FG V  AS VF +MP KN+VSWSAMIAC+AKN  P +ALELF+ MM E+ D
Sbjct: 218  TTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACD 277

Query: 726  VLPNSVTMVSVIQACAALSALEQGKLIHGYIIRNGLDSVLPVMNALVTMYARCGDLKLGE 905
             +PN +TMVSV+QACA+L+ALE GKL+H Y++R GLDS LPV+N L+TMY RCG++  G+
Sbjct: 278  TVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQ 337

Query: 906  NVFNQMEKRDVVSWNSLISSYAIHGLGSKALATFQAMV 1019
             VF+ M+KRDV+SWNSLIS Y +HGLG KA+  F+ M+
Sbjct: 338  RVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMI 375



 Score =  114 bits (284), Expect = 8e-23
 Identities = 74/294 (25%), Positives = 143/294 (48%), Gaps = 8/294 (2%)
 Frame = +3

Query: 120  TYELLIQSCAQKK----SISDAITVHKNLTEDGFDQDPFLATKLINMYAELGSVQYARQV 287
            TY  ++++C   +     +     +H ++   G++    + T L+++YA  G V YA  V
Sbjct: 177  TYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSV 236

Query: 288  FDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMPS--DRFTYTYVLKACVVSG 461
            F  + D+ I  W+A+    +      + L L++ M L    +  +  T   VL+AC    
Sbjct: 237  FGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQAC---- 292

Query: 462  SELSLSRRGKEVHAQLLRRGYETHLHIMTTLVDMYAKFGRVESASLVFSSMPVKNLVSWS 641
            + L+    GK VHA +LRRG ++ L ++ TL+ MY + G + +   VF  M  ++++SW+
Sbjct: 293  ASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWN 352

Query: 642  AMIACFAKNGRPFEALELFREMMRESVDVLPNSVTMVSVIQACAALSALEQGK-LIHGYI 818
            ++I+ +  +G   +A+++F  M+   V   P+ +T ++V+ AC+    +E+ K L    +
Sbjct: 353  SLISIYGMHGLGKKAIQIFENMINRGVS--PSYITFITVLCACSHAGLVEEAKILFESML 410

Query: 819  IRNGLDSVLPVMNALVTMYARCGDLKLGENVFNQME-KRDVVSWNSLISSYAIH 977
             +  +   +     +V +  R   L     +   M+ K     W SL+ S  IH
Sbjct: 411  NKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIH 464



 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 2/188 (1%)
 Frame = +3

Query: 66  KLKQAIHLLSDEENPTQHTYELLIQSCAQKKSISDAITVHKNLTEDGFDQDPFLATKLIN 245
           +L Q + L + +  P   T   ++Q+CA   ++     VH  +   G D    +   LI 
Sbjct: 266 ELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLIT 325

Query: 246 MYAELGSVQYARQVFDNITDRTIYVWNAIFRALSLLGDGEEVLRLYRRMNLIGMPSDRFT 425
           MY   G +   ++VFD +  R +  WN++     + G G++ ++++  M   G+     T
Sbjct: 326 MYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYIT 385

Query: 426 YTYVLKACVVSGSELSLSRRGKEVHAQLLRRGYETH--LHIMTTLVDMYAKFGRVESASL 599
           +  VL AC    S   L    K +   +L + Y  H  +     +VD+  +  R++ A  
Sbjct: 386 FITVLCAC----SHAGLVEEAKILFESMLNK-YRIHPRMEHYACMVDILGRANRLDEAIE 440

Query: 600 VFSSMPVK 623
           +  +M  K
Sbjct: 441 LIQNMDFK 448