BLASTX nr result

ID: Mentha25_contig00019834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00019834
         (495 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU38837.1| hypothetical protein MIMGU_mgv1a0003451mg, partia...    89   5e-16
ref|XP_006342032.1| PREDICTED: 5'-3' exoribonuclease 3-like [Sol...    73   4e-11
ref|XP_004238343.1| PREDICTED: 5'-3' exoribonuclease 3-like [Sol...    67   3e-09
ref|XP_006342572.1| PREDICTED: 5'-3' exoribonuclease 3-like [Sol...    57   2e-06

>gb|EYU38837.1| hypothetical protein MIMGU_mgv1a0003451mg, partial [Mimulus
           guttatus]
          Length = 664

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 47/77 (61%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
 Frame = -3

Query: 421 PNRPDAYFHAPRG-YNNSEGDRSYGGNNYSHKGGSWVPPVNPNAGRGYNNNPRQAGNQFS 245
           P RP  Y+H P G  +N+EGD+ YGG   + +GG  VP     AGRGYN  PRQ GNQFS
Sbjct: 591 PIRPGVYYHEPSGGSSNTEGDKPYGGGYNNKRGG--VPWARGGAGRGYNG-PRQQGNQFS 647

Query: 244 ALGRGGGRRPPQSDYRR 194
           ALGRGG RRPPQSD RR
Sbjct: 648 ALGRGGNRRPPQSDNRR 664


>ref|XP_006342032.1| PREDICTED: 5'-3' exoribonuclease 3-like [Solanum tuberosum]
          Length = 1099

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 43/98 (43%), Positives = 49/98 (50%)
 Frame = -3

Query: 487  VPPQQHNGHXXXXXXXXXGAHAPNRPDAYFHAPRGYNNSEGDRSYGGNNYSHKGGSWVPP 308
            VPP  H  H           H P  P +Y H P  Y     +  Y   +Y+ + G W P 
Sbjct: 1007 VPPIDHF-HQQSRYSSYPNYHEPYEPGSY-HPP--YEPGSYNPPYEPGSYNPQDGGWAPQ 1062

Query: 307  VNPNAGRGYNNNPRQAGNQFSALGRGGGRRPPQSDYRR 194
            VN NAGRGY N PR + N FSALGRG  R PP S YRR
Sbjct: 1063 VNQNAGRGYGN-PRPSSNHFSALGRGNDRGPPSSGYRR 1099


>ref|XP_004238343.1| PREDICTED: 5'-3' exoribonuclease 3-like [Solanum lycopersicum]
          Length = 1109

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 42/98 (42%), Positives = 46/98 (46%)
 Frame = -3

Query: 487  VPPQQHNGHXXXXXXXXXGAHAPNRPDAYFHAPRGYNNSEGDRSYGGNNYSHKGGSWVPP 308
            VPP  H  H           H P  P +Y H P  Y        Y    Y+ + G W P 
Sbjct: 1017 VPPIDHF-HQQSRYSSYPNYHEPYEPGSY-HPP--YEPVSYHPPYEPGPYNPQDGVWAPQ 1072

Query: 307  VNPNAGRGYNNNPRQAGNQFSALGRGGGRRPPQSDYRR 194
            VN NAGRGY N PR + N FSALGR   R PP S YRR
Sbjct: 1073 VNQNAGRGYGN-PRPSSNHFSALGRRNDRGPPSSGYRR 1109


>ref|XP_006342572.1| PREDICTED: 5'-3' exoribonuclease 3-like [Solanum tuberosum]
          Length = 1117

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/76 (43%), Positives = 41/76 (53%)
 Frame = -3

Query: 421  PNRPDAYFHAPRGYNNSEGDRSYGGNNYSHKGGSWVPPVNPNAGRGYNNNPRQAGNQFSA 242
            P  P   FH   GY+ S      G  +Y+ +GG          GRGY++ P  +GNQFSA
Sbjct: 1046 PVPPTTSFHQQSGYDASTSYEPRGAESYNQRGGGRAS--QKQNGRGYHH-PHPSGNQFSA 1102

Query: 241  LGRGGGRRPPQSDYRR 194
             GRGG RRPP S +RR
Sbjct: 1103 FGRGGNRRPP-SGHRR 1117


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