BLASTX nr result

ID: Mentha25_contig00019793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00019793
         (514 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU21529.1| hypothetical protein MIMGU_mgv1a001412mg [Mimulus...   115   6e-24
ref|XP_006341605.1| PREDICTED: chloroplastic group IIA intron sp...    67   3e-09
ref|XP_004235759.1| PREDICTED: chloroplastic group IIA intron sp...    67   3e-09
emb|CBI15459.3| unnamed protein product [Vitis vinifera]               59   5e-07
emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]    59   5e-07

>gb|EYU21529.1| hypothetical protein MIMGU_mgv1a001412mg [Mimulus guttatus]
          Length = 824

 Score =  115 bits (288), Expect = 6e-24
 Identities = 73/169 (43%), Positives = 84/169 (49%)
 Frame = -3

Query: 512 TAKFTELQPHLFSTFSFPRRKPPRFHRILFKPFSSSLRSTKSPHTXXXXXXXXXXXXXXX 333
           TAKFTEL PHL STFSFPRR+P      LFKPFSSS+R TK   T               
Sbjct: 5   TAKFTELPPHLLSTFSFPRRRPSYLPSFLFKPFSSSIRPTKFSRTPPRNRDIPKTPPVWI 64

Query: 332 XXXXXXXXXXXXXXXXXXXXXXXXXXETVHGGTTAIDRIVLRLRNXXXXXXXXXXXXXXX 153
                                       V  GTTAIDRIVLRLRN               
Sbjct: 65  KKWPSPPPALQPPPKFTSKKREPKPEP-VREGTTAIDRIVLRLRNLGLGSDDEDEEEAAA 123

Query: 152 XXXXXXXXXENDDLNSSNSMDVEYGDEKLGDLLKRDWVRPDTILEEDED 6
                     ND+L+ ++S + E+GDEKLGDLL+RDWVRPDTIL+EDE+
Sbjct: 124 AGELGIHSE-NDNLDLNDSANAEFGDEKLGDLLQRDWVRPDTILDEDEE 171


>ref|XP_006341605.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Solanum tuberosum]
          Length = 824

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 40/78 (51%), Positives = 45/78 (57%)
 Frame = -3

Query: 239 GTTAIDRIVLRLRNXXXXXXXXXXXXXXXXXXXXXXXXENDDLNSSNSMDVEYGDEKLGD 60
           GTTAIDRIVLRLRN                         N  L+SS++M V   +EKLGD
Sbjct: 110 GTTAIDRIVLRLRNLGLGSDDEGEGEDEEEG--------NLKLDSSSTMQVNGEEEKLGD 161

Query: 59  LLKRDWVRPDTILEEDED 6
           LLKRDWVRPD ILEE +D
Sbjct: 162 LLKRDWVRPDMILEESDD 179


>ref|XP_004235759.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Solanum lycopersicum]
          Length = 820

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 40/78 (51%), Positives = 45/78 (57%)
 Frame = -3

Query: 239 GTTAIDRIVLRLRNXXXXXXXXXXXXXXXXXXXXXXXXENDDLNSSNSMDVEYGDEKLGD 60
           GTTAIDRIVLRLRN                         N  L+SS++M V   +EKLGD
Sbjct: 110 GTTAIDRIVLRLRNLGLGSDDEGEGEDEEEG--------NLKLDSSSTMQVNGEEEKLGD 161

Query: 59  LLKRDWVRPDTILEEDED 6
           LLKRDWVRPD ILEE +D
Sbjct: 162 LLKRDWVRPDMILEESDD 179


>emb|CBI15459.3| unnamed protein product [Vitis vinifera]
          Length = 830

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/78 (46%), Positives = 45/78 (57%)
 Frame = -3

Query: 239 GTTAIDRIVLRLRNXXXXXXXXXXXXXXXXXXXXXXXXENDDLNSSNSMDVEYGDEKLGD 60
           GT+AI+RIVLRLRN                           ++ S ++M V  GDEKLGD
Sbjct: 114 GTSAIERIVLRLRNLGLGSDDEDKN--------------EGEVESGDTMPVT-GDEKLGD 158

Query: 59  LLKRDWVRPDTILEEDED 6
           LL+RDWVRPD++L EDED
Sbjct: 159 LLQRDWVRPDSMLIEDED 176


>emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
          Length = 850

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/78 (46%), Positives = 45/78 (57%)
 Frame = -3

Query: 239 GTTAIDRIVLRLRNXXXXXXXXXXXXXXXXXXXXXXXXENDDLNSSNSMDVEYGDEKLGD 60
           GT+AI+RIVLRLRN                           ++ S ++M V  GDEKLGD
Sbjct: 114 GTSAIERIVLRLRNLGLGSDDEDKN--------------EGEVESGDTMPVT-GDEKLGD 158

Query: 59  LLKRDWVRPDTILEEDED 6
           LL+RDWVRPD++L EDED
Sbjct: 159 LLQRDWVRPDSMLIEDED 176


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