BLASTX nr result
ID: Mentha25_contig00016992
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00016992
(424 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007044696.1| RNA polymerases N / 8 kDa subunit [Theobroma... 71 3e-19
ref|NP_001148175.1| DNA-directed RNA polymerase II 8.2 kDa polyp... 70 2e-18
gb|EYU22859.1| hypothetical protein MIMGU_mgv1a017499mg [Mimulus... 65 2e-18
ref|XP_006381558.1| hypothetical protein POPTR_0006s13850g [Popu... 65 2e-18
ref|XP_004242416.1| PREDICTED: DNA-directed RNA polymerases I, I... 65 3e-18
ref|XP_007225838.1| hypothetical protein PRUPE_ppa014395mg [Prun... 65 1e-17
ref|NP_001149707.1| DNA-directed RNA polymerase II 8.2 kDa polyp... 66 2e-17
ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, I... 65 2e-17
ref|NP_001152395.1| LOC100286035 [Zea mays] gi|195655855|gb|ACG4... 66 2e-17
ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, I... 65 2e-17
ref|XP_004978899.1| PREDICTED: DNA-directed RNA polymerases I, I... 66 3e-17
ref|NP_001067421.1| Os11g0194800 [Oryza sativa Japonica Group] g... 66 3e-17
ref|NP_001066312.1| Os12g0180400 [Oryza sativa Japonica Group] g... 66 3e-17
ref|XP_006828771.1| hypothetical protein AMTR_s00001p00093860 [A... 65 4e-17
ref|XP_006662796.1| PREDICTED: DNA-directed RNA polymerase subun... 66 5e-17
dbj|BAJ94836.1| predicted protein [Hordeum vulgare subsp. vulgar... 65 5e-17
gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK221... 65 7e-17
gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptid... 65 7e-17
ref|XP_003578831.1| PREDICTED: DNA-directed RNA polymerases I, I... 65 7e-17
ref|NP_849640.1| DNA-directed RNA polymerases II, IV and V subun... 64 7e-17
>ref|XP_007044696.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao]
gi|508708631|gb|EOY00528.1| RNA polymerases N / 8 kDa
subunit [Theobroma cacao]
Length = 113
Score = 70.9 bits (172), Expect(2) = 3e-19
Identities = 35/48 (72%), Positives = 37/48 (77%), Gaps = 6/48 (12%)
Frame = -2
Query: 396 ARENRRRTLAKS------KMIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
AR +RR L KS +MIIPVRCFTCGKVIGNKWD YLDLLQADY
Sbjct: 24 ARRVKRRELGKSQEQELKRMIIPVRCFTCGKVIGNKWDTYLDLLQADY 71
Score = 49.7 bits (117), Expect(2) = 3e-19
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSEGS 185
RMLMTHVDLIEKLLNYNTLEKSE S
Sbjct: 89 RMLMTHVDLIEKLLNYNTLEKSETS 113
>ref|NP_001148175.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide [Zea mays]
gi|224030055|gb|ACN34103.1| unknown [Zea mays]
gi|413916302|gb|AFW56234.1| LOW QUALITY PROTEIN:
DNA-directed RNA polymerase II polypeptide [Zea mays]
Length = 242
Score = 69.7 bits (169), Expect(2) = 2e-18
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = -2
Query: 369 AKSKMIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
A +KMIIPVRCFTCGKVIGNKWD+YLDLLQADY
Sbjct: 168 AAAKMIIPVRCFTCGKVIGNKWDLYLDLLQADY 200
Score = 48.5 bits (114), Expect(2) = 2e-18
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSEGS 185
RMLMTHVDLIEKLLNYNTLEK+E S
Sbjct: 218 RMLMTHVDLIEKLLNYNTLEKTETS 242
>gb|EYU22859.1| hypothetical protein MIMGU_mgv1a017499mg [Mimulus guttatus]
Length = 71
Score = 65.1 bits (157), Expect(2) = 2e-18
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -2
Query: 357 MIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
MIIPVRCFTCGKVIGNKWD YLDLLQADY
Sbjct: 1 MIIPVRCFTCGKVIGNKWDSYLDLLQADY 29
Score = 52.8 bits (125), Expect(2) = 2e-18
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSEGS 185
RMLMTHVDLIEKLLNYNTLEKSEGS
Sbjct: 47 RMLMTHVDLIEKLLNYNTLEKSEGS 71
>ref|XP_006381558.1| hypothetical protein POPTR_0006s13850g [Populus trichocarpa]
gi|118486243|gb|ABK94963.1| unknown [Populus
trichocarpa] gi|550336264|gb|ERP59355.1| hypothetical
protein POPTR_0006s13850g [Populus trichocarpa]
Length = 71
Score = 65.1 bits (157), Expect(2) = 2e-18
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -2
Query: 357 MIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
MIIPVRCFTCGKVIGNKWD YLDLLQADY
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADY 29
Score = 52.8 bits (125), Expect(2) = 2e-18
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSEGS 185
RMLMTHVDLIEKLLNYNTLEKSEGS
Sbjct: 47 RMLMTHVDLIEKLLNYNTLEKSEGS 71
>ref|XP_004242416.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like isoform 2 [Solanum lycopersicum]
gi|565372203|ref|XP_006352686.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC5-like
[Solanum tuberosum]
Length = 71
Score = 64.7 bits (156), Expect(2) = 3e-18
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -2
Query: 357 MIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
MIIPVRCFTCGKVIGNKWD YLDLLQADY
Sbjct: 1 MIIPVRCFTCGKVIGNKWDEYLDLLQADY 29
Score = 52.8 bits (125), Expect(2) = 3e-18
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSEGS 185
RMLMTHVDLIEKLLNYNTLEKSEGS
Sbjct: 47 RMLMTHVDLIEKLLNYNTLEKSEGS 71
>ref|XP_007225838.1| hypothetical protein PRUPE_ppa014395mg [Prunus persica]
gi|462422774|gb|EMJ27037.1| hypothetical protein
PRUPE_ppa014395mg [Prunus persica]
Length = 71
Score = 65.1 bits (157), Expect(2) = 1e-17
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -2
Query: 357 MIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
MIIPVRCFTCGKVIGNKWD YLDLLQADY
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADY 29
Score = 50.4 bits (119), Expect(2) = 1e-17
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSEGS 185
RMLMTHVDLIEKLLNYNTLEKSE S
Sbjct: 47 RMLMTHVDLIEKLLNYNTLEKSENS 71
>ref|NP_001149707.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide [Zea mays]
gi|242082992|ref|XP_002441921.1| hypothetical protein
SORBIDRAFT_08g004910 [Sorghum bicolor]
gi|194696346|gb|ACF82257.1| unknown [Zea mays]
gi|195616462|gb|ACG30061.1| DNA-directed RNA polymerase
II 8.2 kDa polypeptide [Zea mays]
gi|195617954|gb|ACG30807.1| DNA-directed RNA polymerase
II 8.2 kDa polypeptide [Zea mays]
gi|195627516|gb|ACG35588.1| DNA-directed RNA polymerase
II 8.2 kDa polypeptide [Zea mays]
gi|195629628|gb|ACG36455.1| DNA-directed RNA polymerase
II 8.2 kDa polypeptide [Zea mays]
gi|241942614|gb|EES15759.1| hypothetical protein
SORBIDRAFT_08g004910 [Sorghum bicolor]
gi|413916300|gb|AFW56232.1| DNA-directed RNA polymerase
II polypeptide [Zea mays] gi|413916301|gb|AFW56233.1|
DNA-directed RNA polymerase II polypeptide [Zea mays]
gi|413951725|gb|AFW84374.1| DNA-directed RNA polymerase
II polypeptide [Zea mays]
Length = 71
Score = 66.2 bits (160), Expect(2) = 2e-17
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -2
Query: 357 MIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
MIIPVRCFTCGKVIGNKWD+YLDLLQADY
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADY 29
Score = 48.5 bits (114), Expect(2) = 2e-17
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSEGS 185
RMLMTHVDLIEKLLNYNTLEK+E S
Sbjct: 47 RMLMTHVDLIEKLLNYNTLEKTETS 71
>ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Vitis vinifera] gi|590591838|ref|XP_007017127.1|
RNA polymerases N / 8 kDa subunit [Theobroma cacao]
gi|297739069|emb|CBI28558.3| unnamed protein product
[Vitis vinifera] gi|508787490|gb|EOY34746.1| RNA
polymerases N / 8 kDa subunit [Theobroma cacao]
Length = 71
Score = 65.1 bits (157), Expect(2) = 2e-17
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -2
Query: 357 MIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
MIIPVRCFTCGKVIGNKWD YLDLLQADY
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADY 29
Score = 49.7 bits (117), Expect(2) = 2e-17
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSEGS 185
RMLMTHVDLIEKLLNYNTLEKSE S
Sbjct: 47 RMLMTHVDLIEKLLNYNTLEKSETS 71
>ref|NP_001152395.1| LOC100286035 [Zea mays] gi|195655855|gb|ACG47395.1| DNA-directed
RNA polymerase II 8.2 kDa polypeptide [Zea mays]
Length = 71
Score = 65.9 bits (159), Expect(2) = 2e-17
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -2
Query: 357 MIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
MIIPVRCFTCGKVIGNKWD+YLDLLQADY
Sbjct: 1 MIIPVRCFTCGKVIGNKWDVYLDLLQADY 29
Score = 48.5 bits (114), Expect(2) = 2e-17
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSEGS 185
RMLMTHVDLIEKLLNYNTLEK+E S
Sbjct: 47 RMLMTHVDLIEKLLNYNTLEKTETS 71
>ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Fragaria vesca subsp. vesca]
Length = 71
Score = 65.1 bits (157), Expect(2) = 2e-17
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -2
Query: 357 MIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
MIIPVRCFTCGKVIGNKWD YLDLLQADY
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADY 29
Score = 49.3 bits (116), Expect(2) = 2e-17
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSEGS 185
RMLMTHVDLIEKLLNYNTLEKS+ S
Sbjct: 47 RMLMTHVDLIEKLLNYNTLEKSDNS 71
>ref|XP_004978899.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Setaria italica]
Length = 74
Score = 66.2 bits (160), Expect(2) = 3e-17
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -2
Query: 357 MIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
MIIPVRCFTCGKVIGNKWD+YLDLLQADY
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADY 29
Score = 47.8 bits (112), Expect(2) = 3e-17
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSE 191
RMLMTHVDLIEKLLNYNTLEK+E
Sbjct: 47 RMLMTHVDLIEKLLNYNTLEKTE 69
>ref|NP_001067421.1| Os11g0194800 [Oryza sativa Japonica Group]
gi|62733950|gb|AAX96059.1| dna-directed rna polymerase
ii 8.2 kda polypeptide (ec 2.7.7.6)(rpb10) (rp10)
(abc10) [Oryza sativa Japonica Group]
gi|77549069|gb|ABA91866.1| DNA-directed RNA polymerase
II 8.2 kDa polypeptide, putative, expressed [Oryza
sativa Japonica Group] gi|113644643|dbj|BAF27784.1|
Os11g0194800 [Oryza sativa Japonica Group]
gi|215766304|dbj|BAG98532.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 74
Score = 66.2 bits (160), Expect(2) = 3e-17
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -2
Query: 357 MIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
MIIPVRCFTCGKVIGNKWD+YLDLLQADY
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADY 29
Score = 47.8 bits (112), Expect(2) = 3e-17
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSE 191
RMLMTHVDLIEKLLNYNTLEK+E
Sbjct: 47 RMLMTHVDLIEKLLNYNTLEKTE 69
>ref|NP_001066312.1| Os12g0180400 [Oryza sativa Japonica Group]
gi|113648819|dbj|BAF29331.1| Os12g0180400 [Oryza sativa
Japonica Group]
Length = 72
Score = 66.2 bits (160), Expect(2) = 3e-17
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -2
Query: 357 MIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
MIIPVRCFTCGKVIGNKWD+YLDLLQADY
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADY 29
Score = 47.8 bits (112), Expect(2) = 3e-17
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSE 191
RMLMTHVDLIEKLLNYNTLEK+E
Sbjct: 47 RMLMTHVDLIEKLLNYNTLEKTE 69
>ref|XP_006828771.1| hypothetical protein AMTR_s00001p00093860 [Amborella trichopoda]
gi|586757438|ref|XP_006853572.1| hypothetical protein
AMTR_s00032p00243320 [Amborella trichopoda]
gi|548833750|gb|ERM96187.1| hypothetical protein
AMTR_s00001p00093860 [Amborella trichopoda]
gi|548857225|gb|ERN15039.1| hypothetical protein
AMTR_s00032p00243320 [Amborella trichopoda]
Length = 71
Score = 65.1 bits (157), Expect(2) = 4e-17
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -2
Query: 357 MIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
MIIPVRCFTCGKVIGNKWD YLDLLQADY
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADY 29
Score = 48.5 bits (114), Expect(2) = 4e-17
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSEGS 185
RMLMTHVDLIEKLLNYNTLEK+E S
Sbjct: 47 RMLMTHVDLIEKLLNYNTLEKNETS 71
>ref|XP_006662796.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein-like
[Oryza brachyantha]
Length = 74
Score = 66.2 bits (160), Expect(2) = 5e-17
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -2
Query: 357 MIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
MIIPVRCFTCGKVIGNKWD+YLDLLQADY
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADY 29
Score = 47.0 bits (110), Expect(2) = 5e-17
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSEGS 185
RMLMTHVDLIEKLLNYNTLEK++ +
Sbjct: 47 RMLMTHVDLIEKLLNYNTLEKTDAN 71
>dbj|BAJ94836.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520229|dbj|BAK04039.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 71
Score = 64.7 bits (156), Expect(2) = 5e-17
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -2
Query: 357 MIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
MIIPVRCFTCGKVIGNKWD YLDLLQADY
Sbjct: 1 MIIPVRCFTCGKVIGNKWDHYLDLLQADY 29
Score = 48.5 bits (114), Expect(2) = 5e-17
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSEGS 185
RMLMTHVDLIEKLLNYNTLEK+E S
Sbjct: 47 RMLMTHVDLIEKLLNYNTLEKTETS 71
>gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK22149.1| unknown
[Picea sitchensis] gi|116789545|gb|ABK25286.1| unknown
[Picea sitchensis]
Length = 71
Score = 65.1 bits (157), Expect(2) = 7e-17
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -2
Query: 357 MIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
MIIPVRCFTCGKVIGNKWD YLDLLQADY
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADY 29
Score = 47.8 bits (112), Expect(2) = 7e-17
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSE 191
RMLMTHVDLIEKLLNYNTLE+SE
Sbjct: 47 RMLMTHVDLIEKLLNYNTLERSE 69
>gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa
balbisiana]
Length = 70
Score = 65.1 bits (157), Expect(2) = 7e-17
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -2
Query: 357 MIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
MIIPVRCFTCGKVIGNKWD YLDLLQADY
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADY 29
Score = 47.8 bits (112), Expect(2) = 7e-17
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSE 191
RMLMTHVDLIEKLLNYNTLEK+E
Sbjct: 47 RMLMTHVDLIEKLLNYNTLEKTE 69
>ref|XP_003578831.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Brachypodium distachyon]
Length = 71
Score = 64.7 bits (156), Expect(2) = 7e-17
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -2
Query: 357 MIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
MIIPVRCFTCGKVIGNKWD YLDLLQADY
Sbjct: 1 MIIPVRCFTCGKVIGNKWDHYLDLLQADY 29
Score = 48.1 bits (113), Expect(2) = 7e-17
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSEGS 185
RMLMTHVDLIEKLLNYNTLEK+E +
Sbjct: 47 RMLMTHVDLIEKLLNYNTLEKTEAT 71
>ref|NP_849640.1| DNA-directed RNA polymerases II, IV and V subunit 10 [Arabidopsis
thaliana] gi|297843980|ref|XP_002889871.1| hypothetical
protein ARALYDRAFT_471284 [Arabidopsis lyrata subsp.
lyrata] gi|565468954|ref|XP_006292280.1| hypothetical
protein CARUB_v10018490mg [Capsella rubella]
gi|565491696|ref|XP_006303487.1| hypothetical protein
CARUB_v10010812mg [Capsella rubella]
gi|75155887|sp|Q8LFJ6.1|NRPBA_ARATH RecName:
Full=DNA-directed RNA polymerases II, IV and V subunit
10; AltName: Full=DNA-directed RNA Polymerase II subunit
L gi|21537033|gb|AAM61374.1| RNA polymerase II subunit
(hsRPB10), putative [Arabidopsis thaliana]
gi|26451764|dbj|BAC42977.1| putative RNA polymerase II
subunit hsRPB10 [Arabidopsis thaliana]
gi|94807650|gb|ABF47122.1| At1g11475 [Arabidopsis
thaliana] gi|110736743|dbj|BAF00334.1| hypothetical
protein [Arabidopsis thaliana]
gi|297335713|gb|EFH66130.1| hypothetical protein
ARALYDRAFT_471284 [Arabidopsis lyrata subsp. lyrata]
gi|332190620|gb|AEE28741.1| DNA-directed RNA polymerase
subunit NRPB10\NRPD10\NRPE10 [Arabidopsis thaliana]
gi|482560987|gb|EOA25178.1| hypothetical protein
CARUB_v10018490mg [Capsella rubella]
gi|482572198|gb|EOA36385.1| hypothetical protein
CARUB_v10010812mg [Capsella rubella]
Length = 71
Score = 63.5 bits (153), Expect(2) = 7e-17
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = -2
Query: 357 MIIPVRCFTCGKVIGNKWDMYLDLLQADY 271
MIIPVRCFTCGKVIGNKWD YLDLLQ DY
Sbjct: 1 MIIPVRCFTCGKVIGNKWDQYLDLLQLDY 29
Score = 49.3 bits (116), Expect(2) = 7e-17
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -1
Query: 259 RMLMTHVDLIEKLLNYNTLEKSEGS 185
RMLMTHVDLIEKLLNYNTLEKS+ S
Sbjct: 47 RMLMTHVDLIEKLLNYNTLEKSDNS 71