BLASTX nr result

ID: Mentha25_contig00016348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00016348
         (319 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU18105.1| hypothetical protein MIMGU_mgv1a009876mg [Mimulus...    72   8e-11
ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...    61   1e-07
ref|XP_004494258.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...    59   9e-07
gb|EPS68161.1| hypothetical protein M569_06611, partial [Genlise...    58   1e-06
sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, c...    57   3e-06
emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum]                  57   3e-06
emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana s...    57   3e-06
ref|XP_004303408.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...    55   1e-05

>gb|EYU18105.1| hypothetical protein MIMGU_mgv1a009876mg [Mimulus guttatus]
          Length = 328

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 42/84 (50%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
 Frame = -1

Query: 241 TSLHCASTAFDGVELDQXXXXXXXXXXXXXXXXXXXXXXXXXPQIAD----AGRLYVGNL 74
           +S++CASTAFD VEL+Q                          + AD    +GRLY GNL
Sbjct: 64  SSVYCASTAFDSVELNQEDVDDDDDEDEEEDIDEEETLSEIQDEGADVSQPSGRLYAGNL 123

Query: 73  PFTMTSAQLSEIFAEAGRVVSAEV 2
           PF+MTSAQLSEIFAEAGRVVS E+
Sbjct: 124 PFSMTSAQLSEIFAEAGRVVSVEI 147


>ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449528229|ref|XP_004171108.1| PREDICTED: 33
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 323

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 32/78 (41%), Positives = 41/78 (52%)
 Frame = -1

Query: 235 LHCASTAFDGVELDQXXXXXXXXXXXXXXXXXXXXXXXXXPQIADAGRLYVGNLPFTMTS 56
           LHCA  AFD +E+                               +AG+LY+GNLP+ MTS
Sbjct: 69  LHCAPPAFDELEISDPETEYGHIQESDGEEETQEEDEQKVSVSREAGKLYIGNLPYAMTS 128

Query: 55  AQLSEIFAEAGRVVSAEV 2
           +QLSE+FAEAG VVS +V
Sbjct: 129 SQLSEVFAEAGHVVSVQV 146


>ref|XP_004494258.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cicer
           arietinum]
          Length = 318

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/34 (79%), Positives = 32/34 (94%)
 Frame = -1

Query: 103 DAGRLYVGNLPFTMTSAQLSEIFAEAGRVVSAEV 2
           DAGRLYVGNLPF++TS+QL+EIFAEAG VVS E+
Sbjct: 106 DAGRLYVGNLPFSITSSQLAEIFAEAGTVVSVEI 139


>gb|EPS68161.1| hypothetical protein M569_06611, partial [Genlisea aurea]
          Length = 204

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/35 (77%), Positives = 33/35 (94%)
 Frame = -1

Query: 106 ADAGRLYVGNLPFTMTSAQLSEIFAEAGRVVSAEV 2
           ++AGRLYVGNLPF++TSAQLSEIF+EAG VVS E+
Sbjct: 9   SEAGRLYVGNLPFSITSAQLSEIFSEAGGVVSVEI 43


>sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, chloroplastic; Flags:
           Precursor gi|100390|pir||S12111 ribonucleoprotein, 33K,
           precursor - common tobacco gi|20005|emb|CAA37879.1|
           unnamed protein product [Nicotiana tabacum]
          Length = 324

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/76 (43%), Positives = 41/76 (53%)
 Frame = -1

Query: 229 CASTAFDGVELDQXXXXXXXXXXXXXXXXXXXXXXXXXPQIADAGRLYVGNLPFTMTSAQ 50
           CAS + DGVE+ Q                          +  + GRLYVGNLPF+MTS+Q
Sbjct: 71  CASVS-DGVEVVQEDDEEEVALSAEEEEEIEEKEERVESESVEGGRLYVGNLPFSMTSSQ 129

Query: 49  LSEIFAEAGRVVSAEV 2
           LSEIFAEAG V + E+
Sbjct: 130 LSEIFAEAGTVANVEI 145


>emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum]
          Length = 292

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/76 (43%), Positives = 41/76 (53%)
 Frame = -1

Query: 229 CASTAFDGVELDQXXXXXXXXXXXXXXXXXXXXXXXXXPQIADAGRLYVGNLPFTMTSAQ 50
           CAS + DGVE+ Q                          +  + GRLYVGNLPF+MTS+Q
Sbjct: 60  CASVS-DGVEVVQEDDEEEVALSAEEEEEIEEKEESVESESVEGGRLYVGNLPFSMTSSQ 118

Query: 49  LSEIFAEAGRVVSAEV 2
           LSEIFAEAG V + E+
Sbjct: 119 LSEIFAEAGTVANVEI 134


>emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
          Length = 319

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/76 (43%), Positives = 41/76 (53%)
 Frame = -1

Query: 229 CASTAFDGVELDQXXXXXXXXXXXXXXXXXXXXXXXXXPQIADAGRLYVGNLPFTMTSAQ 50
           CAS + DGVE+ Q                          +  + GRLYVGNLPF+MTS+Q
Sbjct: 66  CASVS-DGVEVVQEDDEEEVALSAEEEEEIEEKEESVESESVEGGRLYVGNLPFSMTSSQ 124

Query: 49  LSEIFAEAGRVVSAEV 2
           LSEIFAEAG V + E+
Sbjct: 125 LSEIFAEAGTVANVEI 140


>ref|XP_004303408.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 365

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = -1

Query: 106 ADAGRLYVGNLPFTMTSAQLSEIFAEAGRVVSAEV 2
           +DAGRLYVGNLP++MTS QLSEIF EAG V  +E+
Sbjct: 112 SDAGRLYVGNLPYSMTSTQLSEIFGEAGTVTYSEI 146


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