BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00015514
         (302 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, I...   110   2e-22
ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V sub...   110   2e-22
ref|XP_004230150.1| PREDICTED: DNA-directed RNA polymerases I, I...   110   3e-22
ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V sub...   107   2e-21
gb|EPS63634.1| hypothetical protein M569_11151 [Genlisea aurea]       100   4e-19
gb|EYU18649.1| hypothetical protein MIMGU_mgv1a0134842mg, partia...    96   4e-18
ref|XP_007028545.1| Eukaryotic rpb5 RNA polymerase subunit famil...    94   2e-17
ref|XP_007028544.1| Eukaryotic rpb5 RNA polymerase subunit famil...    94   2e-17
gb|EXC60375.1| hypothetical protein L484_000001 [Morus notabilis]      93   3e-17
gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subun...    93   3e-17
ref|XP_004303602.1| PREDICTED: DNA-directed RNA polymerases I, I...    92   1e-16
ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, I...    92   1e-16
ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Popu...    90   3e-16
ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, I...    90   4e-16
ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ri...    88   1e-15
gb|AAF81222.1| RPB5d [Brassica napus]                                  87   2e-15
emb|CBI30093.3| unnamed protein product [Vitis vinifera]               87   2e-15
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I...    87   2e-15
ref|XP_007202529.1| hypothetical protein PRUPE_ppa010980mg [Prun...    86   4e-15
ref|XP_007162116.1| hypothetical protein PHAVU_001G125200g [Phas...    85   9e-15

>ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Solanum lycopersicum]
          Length = 227

 Score =  110 bits (276), Expect = 2e-22
 Identities = 50/80 (62%), Positives = 65/80 (81%)
 Frame = -2

Query: 241 AMDVDGAGEEVNFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQE 62
           AMDVDG     N G+CL+S +D GTVESHRY+LAR+T+ EML+DRGFA+PN E++ +LQE
Sbjct: 7   AMDVDGE----NLGTCLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTTLQE 62

Query: 61  FRIKYGDLPDVDALRISSLH 2
           FR KYG  PDV+ LR+S++H
Sbjct: 63  FREKYGQTPDVERLRVSAMH 82


>ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
           tuberosum]
          Length = 227

 Score =  110 bits (275), Expect = 2e-22
 Identities = 50/80 (62%), Positives = 65/80 (81%)
 Frame = -2

Query: 241 AMDVDGAGEEVNFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQE 62
           AMDVDG     N G+CL+S +D GTVESHRY+LAR+T+ EML+DRGFA+PN E++ +LQE
Sbjct: 7   AMDVDGD----NLGTCLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTTLQE 62

Query: 61  FRIKYGDLPDVDALRISSLH 2
           FR KYG  PDV+ LR+S++H
Sbjct: 63  FREKYGQTPDVERLRVSAMH 82


>ref|XP_004230150.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Solanum lycopersicum]
          Length = 227

 Score =  110 bits (274), Expect = 3e-22
 Identities = 52/82 (63%), Positives = 65/82 (79%), Gaps = 3/82 (3%)
 Frame = -2

Query: 238 MDVDGAGEEV---NFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSL 68
           MDV+G+  EV   N   CL+S +D GTVESHRY+LARKT+ EML+DRGFA+PN E+E +L
Sbjct: 1   MDVNGSAMEVDVVNVSPCLTSFVDDGTVESHRYFLARKTMLEMLKDRGFAIPNSEIETTL 60

Query: 67  QEFRIKYGDLPDVDALRISSLH 2
           QEFR KYG  PDV+ LRIS++H
Sbjct: 61  QEFREKYGQRPDVERLRISAMH 82


>ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
           tuberosum]
          Length = 227

 Score =  107 bits (267), Expect = 2e-21
 Identities = 50/82 (60%), Positives = 64/82 (78%), Gaps = 3/82 (3%)
 Frame = -2

Query: 238 MDVDGAGEEV---NFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSL 68
           MDV+G+  EV   N   CL+S +D GTVESHRY+LARKT+ EML+DRGFA+PN E++ +L
Sbjct: 1   MDVNGSAMEVDVVNVSPCLASFVDDGTVESHRYFLARKTMLEMLKDRGFAIPNSEIDTTL 60

Query: 67  QEFRIKYGDLPDVDALRISSLH 2
           QEFR KYG  PD + LRIS++H
Sbjct: 61  QEFREKYGQRPDAERLRISAMH 82


>gb|EPS63634.1| hypothetical protein M569_11151 [Genlisea aurea]
          Length = 241

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 44/84 (52%), Positives = 65/84 (77%)
 Frame = -2

Query: 253 KMTEAMDVDGAGEEVNFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEV 74
           K+ EA   +   ++ N G+CLSS +D G++ESHRYYLARKTL EML+DRGFA+   ++++
Sbjct: 2   KVEEAAIDETLEDDENLGTCLSSFVDKGSLESHRYYLARKTLLEMLKDRGFAISPADIDI 61

Query: 73  SLQEFRIKYGDLPDVDALRISSLH 2
           +LQEFRI++ + P VD L+I++LH
Sbjct: 62  TLQEFRIRHSESPSVDGLKITALH 85


>gb|EYU18649.1| hypothetical protein MIMGU_mgv1a0134842mg, partial [Mimulus
           guttatus]
          Length = 81

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 43/68 (63%), Positives = 56/68 (82%)
 Frame = -2

Query: 229 DGAGEEVNFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRIK 50
           +G GE+     CL SL+D G+VESHRYYLAR+T+ EML+DRGFAVP+CE+EVSL+E R K
Sbjct: 11  EGEGEKGGENFCLKSLLDKGSVESHRYYLARRTVLEMLKDRGFAVPSCEIEVSLEEVRNK 70

Query: 49  YGDLPDVD 26
           +G +P+VD
Sbjct: 71  HGQIPEVD 78


>ref|XP_007028545.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 2
           [Theobroma cacao] gi|508717150|gb|EOY09047.1| Eukaryotic
           rpb5 RNA polymerase subunit family protein isoform 2
           [Theobroma cacao]
          Length = 169

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 44/79 (55%), Positives = 58/79 (73%)
 Frame = -2

Query: 238 MDVDGAGEEVNFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEF 59
           ++ DG+  E   G CLS ++D G+ ESHRYYL+R+T+ EMLRDRG+AVP  E+ +SLQEF
Sbjct: 6   LEGDGSNGEA-LGKCLSGVVDDGSTESHRYYLSRRTVLEMLRDRGYAVPISEINLSLQEF 64

Query: 58  RIKYGDLPDVDALRISSLH 2
           R  YG  PD D LR+S+ H
Sbjct: 65  RAIYGQSPDFDRLRLSATH 83


>ref|XP_007028544.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao] gi|508717149|gb|EOY09046.1| Eukaryotic
           rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao]
          Length = 228

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 44/79 (55%), Positives = 58/79 (73%)
 Frame = -2

Query: 238 MDVDGAGEEVNFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEF 59
           ++ DG+  E   G CLS ++D G+ ESHRYYL+R+T+ EMLRDRG+AVP  E+ +SLQEF
Sbjct: 6   LEGDGSNGEA-LGKCLSGVVDDGSTESHRYYLSRRTVLEMLRDRGYAVPISEINLSLQEF 64

Query: 58  RIKYGDLPDVDALRISSLH 2
           R  YG  PD D LR+S+ H
Sbjct: 65  RAIYGQSPDFDRLRLSATH 83


>gb|EXC60375.1| hypothetical protein L484_000001 [Morus notabilis]
          Length = 98

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 47/86 (54%), Positives = 60/86 (69%), Gaps = 3/86 (3%)
 Frame = -2

Query: 250 MTEAMDVDGAGEEVN---FGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEV 80
           M E     G G E N    G+CLSSLID G+VESHRY+L+R TL EML+DRG++VP+ ++
Sbjct: 1   MEENGGSSGGGGEPNGETLGTCLSSLIDKGSVESHRYFLSRITLLEMLKDRGYSVPSSDI 60

Query: 79  EVSLQEFRIKYGDLPDVDALRISSLH 2
            +SL +FR  YG +PDVD LR S  H
Sbjct: 61  NLSLHDFRQIYGQIPDVDRLRFSVTH 86


>gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
           notabilis]
          Length = 231

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 47/86 (54%), Positives = 60/86 (69%), Gaps = 3/86 (3%)
 Frame = -2

Query: 250 MTEAMDVDGAGEEVN---FGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEV 80
           M E     G G E N    G+CLSSLID G+VESHRY+L+R TL EML+DRG++VP+ ++
Sbjct: 1   MEENGGSSGGGGEPNGETLGTCLSSLIDKGSVESHRYFLSRITLLEMLKDRGYSVPSSDI 60

Query: 79  EVSLQEFRIKYGDLPDVDALRISSLH 2
            +SL +FR  YG +PDVD LR S  H
Sbjct: 61  NLSLHDFRQIYGQIPDVDRLRFSVTH 86


>ref|XP_004303602.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like isoform 2 [Fragaria vesca subsp. vesca]
          Length = 215

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 40/76 (52%), Positives = 58/76 (76%)
 Frame = -2

Query: 229 DGAGEEVNFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRIK 50
           +G G+EV  G CLS  +D G+ ESHRY+L+R+T+ EMLRDRG++VP+ E+++SLQ+FR  
Sbjct: 5   NGNGDEVVAGPCLSGFVDDGSTESHRYFLSRRTVLEMLRDRGYSVPSSEIDLSLQDFRSL 64

Query: 49  YGDLPDVDALRISSLH 2
           +G  PD D L  S++H
Sbjct: 65  HGQNPDADRLCFSTVH 80


>ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like isoform 1 [Fragaria vesca subsp. vesca]
          Length = 225

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 40/76 (52%), Positives = 58/76 (76%)
 Frame = -2

Query: 229 DGAGEEVNFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRIK 50
           +G G+EV  G CLS  +D G+ ESHRY+L+R+T+ EMLRDRG++VP+ E+++SLQ+FR  
Sbjct: 5   NGNGDEVVAGPCLSGFVDDGSTESHRYFLSRRTVLEMLRDRGYSVPSSEIDLSLQDFRSL 64

Query: 49  YGDLPDVDALRISSLH 2
           +G  PD D L  S++H
Sbjct: 65  HGQNPDADRLCFSTVH 80


>ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Populus trichocarpa]
           gi|550320761|gb|EEF05018.2| hypothetical protein
           POPTR_0016s03800g [Populus trichocarpa]
          Length = 243

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 37/69 (53%), Positives = 55/69 (79%)
 Frame = -2

Query: 208 NFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRIKYGDLPDV 29
           + G CLSS +D G+ ESHRYYL+R+T+ EML+DRG++VP+ E+++SLQ+FR  YG  PD+
Sbjct: 30  SLGRCLSSFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPDI 89

Query: 28  DALRISSLH 2
           + L+ S+ H
Sbjct: 90  ELLKFSATH 98


>ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
           gi|449524637|ref|XP_004169328.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1-like
           [Cucumis sativus]
          Length = 227

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 42/82 (51%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
 Frame = -2

Query: 238 MDVDGAGEEVN---FGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSL 68
           M+ DG   E N   FG+CLSS ID GT ESHRY+L+R+T+ EML+DRG+ + +  ++ SL
Sbjct: 1   MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSL 60

Query: 67  QEFRIKYGDLPDVDALRISSLH 2
           Q+FR  +G  PDVD L++S+ H
Sbjct: 61  QQFRETFGQFPDVDRLKLSAAH 82


>ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
           gi|223531389|gb|EEF33224.1| DNA-directed RNA polymerase
           II, putative [Ricinus communis]
          Length = 238

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 44/88 (50%), Positives = 62/88 (70%), Gaps = 5/88 (5%)
 Frame = -2

Query: 250 MTEAMDVDG--AGEEVNF---GSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNC 86
           +T A++ +G  A E  N    G C SS  D GT E+HRYYL+R+T+ EMLRDRG++VP+ 
Sbjct: 6   VTAAVNGNGTDASERFNMEGLGKCFSSYADDGTHETHRYYLSRRTVLEMLRDRGYSVPSS 65

Query: 85  EVEVSLQEFRIKYGDLPDVDALRISSLH 2
           E+++SLQEFR  +G  PD+D L+ S+ H
Sbjct: 66  EIDLSLQEFRAIHGPNPDIDRLKFSATH 93


>gb|AAF81222.1| RPB5d [Brassica napus]
          Length = 223

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 41/77 (53%), Positives = 56/77 (72%)
 Frame = -2

Query: 232 VDGAGEEVNFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRI 53
           ++G G+E+  GS LS  +D   V+SH YYLAR+T  EMLRDRG+ + N ++ ++LQEFR 
Sbjct: 1   MEGKGKELAVGSGLSKSLDESRVDSHSYYLARRTTMEMLRDRGYDISNEDINLTLQEFRA 60

Query: 52  KYGDLPDVDALRISSLH 2
            YGD P+VD LRIS+ H
Sbjct: 61  LYGDRPNVDRLRISAQH 77


>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 38/63 (60%), Positives = 50/63 (79%)
 Frame = -2

Query: 196 CLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRIKYGDLPDVDALR 17
           CLSS +D G +ESHRYYLAR+TL EMLRDRG+++P  ++++SLQ+FR  Y   PD D LR
Sbjct: 121 CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 180

Query: 16  ISS 8
           IS+
Sbjct: 181 ISA 183


>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Vitis vinifera]
          Length = 229

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 38/63 (60%), Positives = 50/63 (79%)
 Frame = -2

Query: 196 CLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRIKYGDLPDVDALR 17
           CLSS +D G +ESHRYYLAR+TL EMLRDRG+++P  ++++SLQ+FR  Y   PD D LR
Sbjct: 20  CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 79

Query: 16  ISS 8
           IS+
Sbjct: 80  ISA 82


>ref|XP_007202529.1| hypothetical protein PRUPE_ppa010980mg [Prunus persica]
           gi|462398060|gb|EMJ03728.1| hypothetical protein
           PRUPE_ppa010980mg [Prunus persica]
          Length = 228

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 36/67 (53%), Positives = 53/67 (79%)
 Frame = -2

Query: 202 GSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRIKYGDLPDVDA 23
           G CL+  +D G+ ESHRYYL+R+T+ EM+RDRG++VP+ E+++SLQ+FR  +G  PDV+ 
Sbjct: 17  GPCLTGYVDDGSPESHRYYLSRRTVLEMIRDRGYSVPSSEIDLSLQDFRALHGQNPDVER 76

Query: 22  LRISSLH 2
           LR S+ H
Sbjct: 77  LRFSATH 83


>ref|XP_007162116.1| hypothetical protein PHAVU_001G125200g [Phaseolus vulgaris]
           gi|561035580|gb|ESW34110.1| hypothetical protein
           PHAVU_001G125200g [Phaseolus vulgaris]
          Length = 242

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
 Frame = -2

Query: 244 EAMDVDGAGEEVN--FGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVS 71
           E  + +GA +E       CLS  ID GTVESHRYYL+R+T  EML+DRG+++P+ E+++S
Sbjct: 15  ELAEQEGAEQEETEQVKGCLSKFIDDGTVESHRYYLSRRTTLEMLKDRGYSIPSNEIDLS 74

Query: 70  LQEFRIKYGDLPDVDALRISSLH 2
           L +FR  +G  PD D LR+S  H
Sbjct: 75  LSQFRHMHGHSPDPDRLRLSLAH 97