BLASTX nr result
ID: Mentha25_contig00014130
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha25_contig00014130 (1339 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 466 e-128 ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624... 464 e-128 gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 459 e-127 emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 458 e-126 gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 458 e-126 emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 457 e-126 gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 457 e-126 gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 457 e-126 emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera] 457 e-126 gb|AAB82754.1| retrofit [Oryza longistaminata] 456 e-126 gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 454 e-125 gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 453 e-125 gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc... 452 e-124 gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 451 e-124 gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa... 450 e-124 emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] 450 e-124 pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 447 e-123 emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera] 447 e-123 dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 443 e-122 gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-... 442 e-121 >gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group] gi|108706314|gb|ABF94109.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1247 Score = 466 bits (1198), Expect = e-128 Identities = 234/447 (52%), Positives = 304/447 (68%), Gaps = 2/447 (0%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 LD+ KARLVA+GF+Q IDY +TFSPVVK TIR++ S+A ++ WC++QLDV NAFL+G Sbjct: 796 LDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSKGWCMRQLDVQNAFLHG 855 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLFNLGFQRCTSDF 362 VLE+ +YM QP G+EDS+ P YVCKL+K+LYGLKQAPRAWY L K L+++GFQ +D Sbjct: 856 VLEEEVYMKQPPGYEDSSLPGYVCKLDKALYGLKQAPRAWYSRLSKKLYDMGFQGSKADT 915 Query: 363 SLFYKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVDC 542 SLF+ T ++AV ++ LQ+EF LK LG + YFLGIEV Sbjct: 916 SLFFYNKGDLIIFVLIYVDDIIVTSSRQEAVPALLRDLQKEFALKDLGDLHYFLGIEVTK 975 Query: 543 SNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPF--SNPRLYRSTVGA 716 + L Q KY+++LL + NM DCKP STP++ + KLS EG P ++ YRS VGA Sbjct: 976 VSGGIVLTQDKYVNDLLRRVNMFDCKPVSTPLSTSEKLSINEGDPLGPNDATHYRSVVGA 1035 Query: 717 LQYLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIEA 896 LQYLTLTRPDIA+ VNK+ QFL +P HW + KR+LRYLK L L+ + S S + A Sbjct: 1036 LQYLTLTRPDIAFPVNKVCQFLHAPTTHHWAAVKRILRYLKQCTRLGLKLSKSRSMLVSA 1095 Query: 897 FSDADWAGCIDGRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWL 1076 +SDADWAG +D RRSTGG V+ G NLV WS++KQ VSRSS ESEY+ALAN TAE++W+ Sbjct: 1096 YSDADWAGSLDDRRSTGGFAVFLGDNLVSWSARKQATVSRSSTESEYKALANATAEIMWV 1155 Query: 1077 HSLCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKVAAKFINVGP 1256 +L EL + S ++WCDN A L++NP FHARTKHIEVD HF RE+V+ K + + Sbjct: 1156 QTLLAELQVESPSMAKLWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSRKLLEIDF 1215 Query: 1257 ISGQEQVADIFTKPLTTEHFEFLRSKL 1337 + +QVAD FTK L+ E + L Sbjct: 1216 VPTGDQVADGFTKALSVRQLENFKYNL 1242 >ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis] Length = 1682 Score = 464 bits (1193), Expect = e-128 Identities = 243/446 (54%), Positives = 298/446 (66%), Gaps = 1/446 (0%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 + + KARLVA+GF Q +DY ETFSPVVK +T+R++ SLA W ++Q+DVNNAFLNG Sbjct: 381 ISRYKARLVAKGFHQTQGVDYTETFSPVVKASTVRVILSLAVMNKWELRQVDVNNAFLNG 440 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLF-NLGFQRCTSD 359 +L +++YM QP GF D + P +VCKL+K+LYGLKQAPRAW++ LK + GFQ SD Sbjct: 441 ILVEDVYMGQPEGFIDPSRPLHVCKLKKALYGLKQAPRAWFERLKDAMVVKWGFQNSRSD 500 Query: 360 FSLFYKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVD 539 SLFYK TG V VI+ +Q F LK LG++SYFLGIEV Sbjct: 501 NSLFYKWIGDQVIFVLVYVDDIIITGSSDKMVQQVITNMQNAFALKDLGKLSYFLGIEVT 560 Query: 540 CSNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPFSNPRLYRSTVGAL 719 + S L Q KYI ++L K NM DC P TPMA L++ G SN Y+S VGAL Sbjct: 561 KTASGIYLSQSKYIADILAKHNMADCSPVPTPMATGHYLTKGSGSVISNSSQYKSAVGAL 620 Query: 720 QYLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIEAF 899 QY+TLTRP+IA+SVNKLSQFL SP EHW SCKRLLRYLKGT L F + I F Sbjct: 621 QYVTLTRPEIAFSVNKLSQFLASPTAEHWESCKRLLRYLKGTIHFGLHFYHYGTMQINCF 680 Query: 900 SDADWAGCIDGRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWLH 1079 SD+DWA D R+S G+ VY GSNLV WSSKKQ VVSRSS E+EYRALA TAEV W+ Sbjct: 681 SDSDWACDKDDRKSVAGYAVYLGSNLVSWSSKKQAVVSRSSTEAEYRALAQATAEVTWIQ 740 Query: 1080 SLCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKVAAKFINVGPI 1259 SL EL I + + +WCDN SA+ALA NP +HA+TKH+E+D+HF R+KV AK I V I Sbjct: 741 SLLKELHIHLVTAPIMWCDNQSAIALAHNPVYHAKTKHVELDIHFIRDKVTAKQITVQFI 800 Query: 1260 SGQEQVADIFTKPLTTEHFEFLRSKL 1337 ++Q AD+ TK LT F +LRSKL Sbjct: 801 PSEDQNADVLTKALTFNQFHYLRSKL 826 >gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group] gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1431 Score = 459 bits (1182), Expect = e-127 Identities = 233/447 (52%), Positives = 302/447 (67%), Gaps = 2/447 (0%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 LD+ KAR+VA+GF+Q IDY +TF+PVVK TIR + S+A +R W ++QLDV NAFL+G Sbjct: 981 LDRYKARVVAKGFKQRYGIDYEDTFNPVVKAATIRTILSIAISRGWTLRQLDVQNAFLHG 1040 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLFNLGFQRCTSDF 362 VLE++++M QP G+E YVCKL+K+LYGLKQAPRAWY L L LGF+ SD Sbjct: 1041 VLEEDVFMRQPPGYEQKD--GYVCKLDKALYGLKQAPRAWYSRLSTKLHELGFKSSKSDT 1098 Query: 363 SLFYKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVDC 542 SLF+ + DA ++ L QEF LK LG++ YFLGIEV Sbjct: 1099 SLFFYSKGDVAMFMLVYVDDIIVASSSIDATNALLKNLNQEFALKDLGRLHYFLGIEVKE 1158 Query: 543 SNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPFS--NPRLYRSTVGA 716 N+ L Q KY ++L++ NM DCK +TP++++ KLS EG PF + YRS VGA Sbjct: 1159 VNNGIVLTQEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHEGNPFGPEDSTRYRSLVGA 1218 Query: 717 LQYLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIEA 896 LQYLTLTRPD+++SVNK+ Q+L +P +HW + KR+LRYLK T L L+ + S+S + A Sbjct: 1219 LQYLTLTRPDLSFSVNKVCQYLHAPTTKHWAAAKRILRYLKHTVKLGLKISKSNSLLVSA 1278 Query: 897 FSDADWAGCIDGRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWL 1076 FSDADWAGC+D R STGG V+ G NLV WS++KQ VSRSS E+EY+ALANVTAE++W+ Sbjct: 1279 FSDADWAGCLDDRHSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANVTAEIMWI 1338 Query: 1077 HSLCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKVAAKFINVGP 1256 +L ELGI +VWCDN A + +NP FHARTKHIEVD HF RE+VA KF+ V Sbjct: 1339 QTLLHELGIQAPKIAKVWCDNIGAKYMTANPVFHARTKHIEVDYHFVRERVARKFLQVEY 1398 Query: 1257 ISGQEQVADIFTKPLTTEHFEFLRSKL 1337 IS ++QVAD FTK L+ E R+ L Sbjct: 1399 ISTKDQVADGFTKTLSVRQLEMFRNNL 1425 >emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] Length = 1271 Score = 458 bits (1179), Expect = e-126 Identities = 233/445 (52%), Positives = 301/445 (67%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 +D+ KARLVA+GF Q ++Y ETFSPVVK +TIR++ ++A + NW + QLDV NAFL+G Sbjct: 769 VDRYKARLVAQGFTQTLGLBYFETFSPVVKASTIRIILAVALSFNWSVHQLDVQNAFLHG 828 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLFNLGFQRCTSDF 362 LE++++M QP GF +S YP +VCKL K+LYGLKQAPRAWY+ L L GFQ +D Sbjct: 829 DLEEHVFMQQPPGFINSQYPSHVCKLNKALYGLKQAPRAWYNKLSTSLLGWGFQASRADS 888 Query: 363 SLFYKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVDC 542 S+F S+ TG V I+ L F L+ LG V+YFLGIEV Sbjct: 889 SMFIHHSTHDVLILLIYVDDILVTGSSSAQVSSFITRLNSSFALRDLGYVNYFLGIEVVR 948 Query: 543 SNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPFSNPRLYRSTVGALQ 722 S + F L Q KY +LL +T MLD KP +TP + LS +G+PFS+ LYRSTVGALQ Sbjct: 949 SGTMFHLSQHKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQ 1008 Query: 723 YLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIEAFS 902 YLTLTRPDI+++VNK QF+ +P HW + KR+LRYLKGT S +Q S+S I ++ Sbjct: 1009 YLTLTRPDISFAVNKACQFMATPTTTHWLAVKRILRYLKGTLSYGIQMQQSTSLDIHGYT 1068 Query: 903 DADWAGCIDGRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWLHS 1082 DADWA C D RRSTGG+ ++ G NLV WSS KQ VVSRSSAESEYRALA+ T+E++W+ Sbjct: 1069 DADWASCPDDRRSTGGYGIFLGPNLVSWSSNKQKVVSRSSAESEYRALASATSEMIWIQY 1128 Query: 1083 LCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKVAAKFINVGPIS 1262 + EL + SSP +WCDN SA LA+NP FHARTKHIE+D+HF R+ V K + + + Sbjct: 1129 VLQELCLSSSSPPLLWCDNKSAAHLAANPVFHARTKHIEMDLHFIRDHVLRKQLVIQYLP 1188 Query: 1263 GQEQVADIFTKPLTTEHFEFLRSKL 1337 EQVADIFTK +++ F R+KL Sbjct: 1189 SAEQVADIFTKHISSSQFLSFRTKL 1213 >gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1447 Score = 458 bits (1178), Expect = e-126 Identities = 233/447 (52%), Positives = 295/447 (65%), Gaps = 2/447 (0%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 LD+ KARLVA+GF+Q IDY +TFSPVVK TIR+V S+A +R WC++QLDV NAFL+G Sbjct: 996 LDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVLSIAVSRGWCMRQLDVQNAFLHG 1055 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLFNLGFQRCTSDF 362 LE+ +YM QP G+ED ++P YVCKL+K+LYGLKQAPRAWY L K L++LGFQ D Sbjct: 1056 FLEEEVYMKQPPGYEDESFPGYVCKLDKALYGLKQAPRAWYSRLSKKLYDLGFQGSKGDT 1115 Query: 363 SLFYKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVDC 542 SLF+ T ++AV ++ L++EF LK LG + YFLGIEV+ Sbjct: 1116 SLFFYNKGGLIIFVLIYVDDIIVTSSRQEAVSALLQDLKKEFALKDLGDLHYFLGIEVNK 1175 Query: 543 SNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPFS--NPRLYRSTVGA 716 E L Q KY +LL + NM DCKP STP++ + KLS EG + YRS VGA Sbjct: 1176 VTDEIILTQDKYACDLLRRVNMFDCKPVSTPLSTSEKLSAHEGDLLGPLDATNYRSVVGA 1235 Query: 717 LQYLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIEA 896 LQYLTLTRPDIA+ VNK+ QFL +P HW + KR+LRYLK L L+ S S + A Sbjct: 1236 LQYLTLTRPDIAFPVNKVCQFLHAPTTVHWAAVKRILRYLKQCTKLGLKLCKSKSMLVSA 1295 Query: 897 FSDADWAGCIDGRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWL 1076 +SDADWAG +D RRSTGG V+ G NLV W ++KQ VSRSS ESEY+ALAN TAE++W+ Sbjct: 1296 YSDADWAGSLDDRRSTGGFAVFLGDNLVSWCARKQATVSRSSTESEYKALANATAEIMWV 1355 Query: 1077 HSLCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKVAAKFINVGP 1256 +L EL + ++WCDN A L+SNP FHARTKHIEVD HF RE+V+ K + + Sbjct: 1356 QTLLTELQVQSPPMAKLWCDNLGAKYLSSNPVFHARTKHIEVDYHFVRERVSQKLLEIDF 1415 Query: 1257 ISGQEQVADIFTKPLTTEHFEFLRSKL 1337 + +QVAD FTK L E + L Sbjct: 1416 VPTGDQVADGFTKALPVRQLENFKHNL 1442 >emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] Length = 1455 Score = 457 bits (1177), Expect = e-126 Identities = 226/445 (50%), Positives = 298/445 (66%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 + K KARLVA+GF Q A D+ ETFSPVVK +T+R+VF++A +RNW I+QLDVNNAFLNG Sbjct: 994 VQKYKARLVAKGFHQQAGFDFTETFSPVVKPSTVRVVFTIALSRNWAIKQLDVNNAFLNG 1053 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLFNLGFQRCTSDF 362 L++ ++M QP GF D P+ VC+L K+LYGLKQAPRAW++ L + L + GF SD Sbjct: 1054 DLQEEVFMQQPQGFIDEQNPNLVCRLHKALYGLKQAPRAWFEKLHRALLSFGFVSAKSDQ 1113 Query: 363 SLFYKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVDC 542 SLF + + G D A+ +I+ L EF LK LG+V YFLGI+V Sbjct: 1114 SLFLRFTPNHITYVLVYVDDILVIGSDTAAITSLIAQLNSEFSLKDLGEVHYFLGIQVSH 1173 Query: 543 SNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPFSNPRLYRSTVGALQ 722 +N+ L Q KYI +LL+KT M+ CKP TP+ KL +G P + YRSTVGALQ Sbjct: 1174 TNNGLHLSQTKYIRDLLQKTKMVHCKPARTPLPTGLKLRVGDGDPVEDLHGYRSTVGALQ 1233 Query: 723 YLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIEAFS 902 Y+T+TRP++++SVNK+ QF+Q+P EEHW KR+LRYL+GT L SS+ + F Sbjct: 1234 YVTITRPELSFSVNKVCQFMQNPTEEHWKVVKRILRYLQGTLQHGLHLKKSSNLDLIGFC 1293 Query: 903 DADWAGCIDGRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWLHS 1082 DADWA +D RRST GHCV+ G NL+ W SKKQ +VSRSS E EYR+LA + AE+ WL S Sbjct: 1294 DADWASDLDDRRSTSGHCVFLGPNLISWQSKKQHIVSRSSIEIEYRSLAGLVAEITWLRS 1353 Query: 1083 LCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKVAAKFINVGPIS 1262 L EL +P++ P VWCDN S V L++NP HARTKHIE+D++F REKV K + V + Sbjct: 1354 LLSELQLPLAKPPLVWCDNLSTVLLSANPVLHARTKHIELDLYFVREKVIRKEVEVRHVP 1413 Query: 1263 GQEQVADIFTKPLTTEHFEFLRSKL 1337 +Q+AD+ TK +++ F R KL Sbjct: 1414 SADQLADVLTKTVSSTQFIEFRHKL 1438 >gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1460 Score = 457 bits (1176), Expect = e-126 Identities = 231/447 (51%), Positives = 299/447 (66%), Gaps = 2/447 (0%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 LD+ KARLVA+GF+Q IDY +TFSPVVK TIR++ SLA ++ W ++QLDV NAFL+G Sbjct: 1002 LDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHG 1061 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLFNLGFQRCTSDF 362 LE+ +YM QP GFED T P +VCKL+K+LYGLKQAPRAW+ L K L +LGF+ D Sbjct: 1062 YLEEEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKPDT 1121 Query: 363 SLFYKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVDC 542 SLF+ + A ++ L+ EF LK LG++ YFLGIEV Sbjct: 1122 SLFFLNKGDITMFVLVYVDDIIVASSSEKATAALLQDLKGEFALKDLGELHYFLGIEVSK 1181 Query: 543 SNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPFS--NPRLYRSTVGA 716 + L Q KY ++LL+K M+DCKP +TP++V+ KLS EG + YRS VGA Sbjct: 1182 VQNGIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGA 1241 Query: 717 LQYLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIEA 896 LQYLTLTRPDIA+SVNK+ QFL +P HW + KR+LRYLK L L+ S S+ + Sbjct: 1242 LQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSG 1301 Query: 897 FSDADWAGCIDGRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWL 1076 FSDADWAGC+D RRSTGG ++ GSNLV W+++KQ VSRSS ESEY+A+AN TAE++W+ Sbjct: 1302 FSDADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWV 1361 Query: 1077 HSLCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKVAAKFINVGP 1256 +L EL I ++WCDN A L++NP FHARTKHIEVD HF RE+V+ K + + Sbjct: 1362 QTLLAELEIKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDF 1421 Query: 1257 ISGQEQVADIFTKPLTTEHFEFLRSKL 1337 +S +QVAD FTKPL+ E +S L Sbjct: 1422 VSTNDQVADGFTKPLSVRLLENFKSNL 1448 >gb|ACY72569.1| unknown [Oryza sativa Japonica Group] Length = 1436 Score = 457 bits (1176), Expect = e-126 Identities = 230/444 (51%), Positives = 301/444 (67%), Gaps = 5/444 (1%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 LD+ KARLVA+GF+Q IDY +TFSPVVK TIR++ S+A +R W ++QLDV NAFL+G Sbjct: 985 LDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHG 1044 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLFNLGFQRCTSDF 362 LE+ +YM QP GFE + P+YVCKL+K+LYGLKQAPRAWY L K L LGF+ +D Sbjct: 1045 FLEEEVYMQQPPGFESFSKPNYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADT 1104 Query: 363 SLFYKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVDC 542 SLF+ + A ++ L +EF LK LG + YFLGIEV Sbjct: 1105 SLFFLNKGGIIMFVLVYVDDIIIASSTEKATTALLKDLNKEFALKDLGDLHYFLGIEVTK 1164 Query: 543 SNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPF--SNPRLYRSTVGA 716 + L Q KY ++LL++ NM +CKP STP++V+ KL+ +EG P ++ YRS VGA Sbjct: 1165 VPNGIVLTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGA 1224 Query: 717 LQYLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIEA 896 LQYLTLTRPDIAYSVNK+ QFL +P +HWT+ KR+LRYL SL L S+S+ + Sbjct: 1225 LQYLTLTRPDIAYSVNKVCQFLHAPTTDHWTAVKRILRYLNQCTSLGLNIHKSASTLVHG 1284 Query: 897 FSDADWAGCIDGRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWL 1076 +SDADWAG +D R+STGG V+ GSNLV WS++KQ VSRSS E+EY+A+AN TAE++W+ Sbjct: 1285 YSDADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWV 1344 Query: 1077 HSLCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKVAAKFINVGP 1256 +L ELGI ++WCDN A L++NP FHARTKHIEVD HF RE+V+ K + + Sbjct: 1345 QTLLRELGIDSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDF 1404 Query: 1257 ISGQEQVADIFTKPLTT---EHFE 1319 + +QVAD FTK L+ EHF+ Sbjct: 1405 VPSGDQVADGFTKALSVRLLEHFK 1428 >emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera] Length = 1002 Score = 457 bits (1175), Expect = e-126 Identities = 231/445 (51%), Positives = 302/445 (67%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 + + KARLVA+GF+Q A +++ +TFSPV+K +TIR+VF+LA T NW I+Q+D NNAFLNG Sbjct: 549 IQRYKARLVAKGFQQYAGVEFTDTFSPVIKASTIRVVFTLAITYNWEIRQIDFNNAFLNG 608 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLFNLGFQRCTSDF 362 + + +Y++QP GF +++P +VCKL+K+LYGLKQAPR W+ L++ L GF TSD Sbjct: 609 EITETVYLSQPAGFVSTSHPQHVCKLQKALYGLKQAPRVWFHKLREALHTWGFISSTSDT 668 Query: 363 SLFYKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVDC 542 SLF + TG++ V +I LQ F LK LG V FLG E Sbjct: 669 SLFIYKHNGNFLLLLVYVDDLLITGNNVPLVQTLIQDLQNRFALKDLGLVKDFLGFEALR 728 Query: 543 SNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPFSNPRLYRSTVGALQ 722 + + L Q KY +LL KT M KP TPM+ KL G FS+P LYRST+GALQ Sbjct: 729 TTTGLHLTQSKYTTDLLIKTKMHSAKPVPTPMSAALKLHAASGPAFSDPTLYRSTIGALQ 788 Query: 723 YLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIEAFS 902 YLT TRPDIA++VNKLSQ+LQ P E HWT+CKR+LRYLKG L FTP+SS ++ ++ Sbjct: 789 YLTYTRPDIAFAVNKLSQYLQQPTELHWTACKRVLRYLKGIVHRGLHFTPASSLHLQVYT 848 Query: 903 DADWAGCIDGRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWLHS 1082 DADWA ID RRST G+CV+ G+NL WSS+KQ VV+RSS ++EYRALA+ + EV WL S Sbjct: 849 DADWASSIDDRRSTTGYCVFLGTNLFTWSSRKQPVVARSSTKAEYRALAHASXEVAWLRS 908 Query: 1083 LCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKVAAKFINVGPIS 1262 L ELGI + + +WCDN A ALA+NP FH+RTKHIEVDV + RE+V K + V + Sbjct: 909 LFSELGISLVNTPVIWCDNQGAGALAANPVFHSRTKHIEVDVXYVREQVLDKKLVVSYVP 968 Query: 1263 GQEQVADIFTKPLTTEHFEFLRSKL 1337 EQ AD+FTKPL+ F++L +KL Sbjct: 969 SVEQXADLFTKPLSIPRFQYLLTKL 993 >gb|AAB82754.1| retrofit [Oryza longistaminata] Length = 1445 Score = 456 bits (1174), Expect = e-126 Identities = 229/436 (52%), Positives = 297/436 (68%), Gaps = 2/436 (0%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 LD+ KARLVA+GF+Q IDY +TFSPVVK TIR++ S+A +R W ++QLDV NAFL+G Sbjct: 994 LDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHG 1053 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLFNLGFQRCTSDF 362 LE+ +YM QP GFE S+ PDYVCKL+K+LYGLKQAPRAWY L K L LGF+ +D Sbjct: 1054 FLEEEVYMQQPPGFESSSKPDYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADT 1113 Query: 363 SLFYKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVDC 542 SLF+ + A ++ L +EF LK LG + YFLGIEV Sbjct: 1114 SLFFLNKGGILMFVLVYVDDIIVASSTEKATTALLKDLNKEFALKDLGDLHYFLGIEVTK 1173 Query: 543 SNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPF--SNPRLYRSTVGA 716 ++ L Q KY ++LL++ NM +CKP STP++V+ KL+ +EG P ++ YRS VGA Sbjct: 1174 VSNGVILTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDAIQYRSIVGA 1233 Query: 717 LQYLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIEA 896 LQYLTLTRPDIAYSVNK+ QFL +P HW + KR+LRYL SL L S+S+ + Sbjct: 1234 LQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGLHIHKSASTLVHG 1293 Query: 897 FSDADWAGCIDGRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWL 1076 +SDADWAG ID R+STGG V+ GSNLV WS++KQ VSRSS E+EY+A+AN TAE++W+ Sbjct: 1294 YSDADWAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWV 1353 Query: 1077 HSLCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKVAAKFINVGP 1256 +L ELGI ++WCDN A L++NP FHARTKHIEVD HF RE+V+ K + + Sbjct: 1354 QTLLKELGIESPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDF 1413 Query: 1257 ISGQEQVADIFTKPLT 1304 + +QVAD FTK L+ Sbjct: 1414 VPSGDQVADGFTKALS 1429 >gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group] gi|108708884|gb|ABF96679.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1437 Score = 454 bits (1169), Expect = e-125 Identities = 232/447 (51%), Positives = 298/447 (66%), Gaps = 2/447 (0%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 LD+ KARLVA+GF+Q IDY +TFSPVVK TIR++ S+A +R WC++QLDV NAFL+G Sbjct: 980 LDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWCLRQLDVQNAFLHG 1039 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLFNLGFQRCTSDF 362 VLE+ +YM QP G+E+ + PDYVCKL+K+LYGLKQAPRAWY L L +LGF+ +D Sbjct: 1040 VLEEEVYMKQPPGYENPSTPDYVCKLDKALYGLKQAPRAWYSRLSGKLHDLGFKGSKADT 1099 Query: 363 SLFYKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVDC 542 SLF+ + K+AV ++ LQ+EF LK LG + YFLGIEV Sbjct: 1100 SLFFYNKGSLTIFLLIYVDDIIVVSSRKEAVSALLQDLQKEFALKDLGDLHYFLGIEVTK 1159 Query: 543 SNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPF--SNPRLYRSTVGA 716 + Q KY +LL++ NM DCK +TP++ + KL +G ++ YRS VGA Sbjct: 1160 IPGGILMSQEKYASDLLKRVNMSDCKSVATPLSASEKLIAGKGTILGPNDATQYRSIVGA 1219 Query: 717 LQYLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIEA 896 LQYLTLTR DIA+SVNK+ QFL +P EHW + KR+LRY+K L L+ SSS + Sbjct: 1220 LQYLTLTRLDIAFSVNKVCQFLHNPTTEHWAAVKRILRYIKQCTGLGLRICKSSSMIVSG 1279 Query: 897 FSDADWAGCIDGRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWL 1076 +SDADWAGC+D RRSTGG VY G NLV W++KKQ VSRSS E+EY+ALAN TAE++W+ Sbjct: 1280 YSDADWAGCLDDRRSTGGFAVYLGDNLVSWNAKKQATVSRSSTEAEYKALANATAEIMWV 1339 Query: 1077 HSLCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKVAAKFINVGP 1256 +L EL I + Q+WCDN A L+ NP FHARTKHIEVD HF RE+VA K + V Sbjct: 1340 QTLLQELNIVSPAMAQLWCDNMGAKYLSFNPVFHARTKHIEVDYHFVRERVARKLLQVDY 1399 Query: 1257 ISGQEQVADIFTKPLTTEHFEFLRSKL 1337 +S +QVAD FTK L + E + L Sbjct: 1400 VSTNDQVADGFTKALPVKQLENFKYNL 1426 >gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays] Length = 1313 Score = 453 bits (1166), Expect = e-125 Identities = 232/447 (51%), Positives = 298/447 (66%), Gaps = 2/447 (0%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 LD+ KARLVA+G++Q IDY++TFSPVVK TIR++ S+A +R W + QLDV NAFL+G Sbjct: 862 LDRYKARLVAKGYKQQYGIDYDDTFSPVVKHATIRIILSIAVSRGWSLCQLDVQNAFLHG 921 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLFNLGFQRCTSDF 362 VLE+ +YM QP G+EDST +YVCKL+K+LYGLKQAPRAWY L L +LGFQ +D Sbjct: 922 VLEEEVYMQQPPGYEDSTKLNYVCKLDKALYGLKQAPRAWYSRLSNKLLSLGFQASKADT 981 Query: 363 SLFYKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVDC 542 SLF+ + A ++S L +EF LK LG ++YFLGIEV+ Sbjct: 982 SLFFYNKGSVTIFVLVYVDDIIVASSTHKATEALLSDLNKEFALKDLGDLNYFLGIEVNK 1041 Query: 543 SNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPFSNPRL--YRSTVGA 716 L Q KY +LL+K M DCKP STP++ + KLS EG P + YRS VGA Sbjct: 1042 VRDGIILTQDKYASDLLKKVGMSDCKPISTPLSTSEKLSIHEGSPLGEKDITQYRSIVGA 1101 Query: 717 LQYLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIEA 896 LQYLTLTRPDIA+SVNK+ QFL +P HW + KR+LRY+K +L L S S+ + A Sbjct: 1102 LQYLTLTRPDIAFSVNKVCQFLHAPTTLHWAAVKRILRYIKQCTNLGLHIHRSDSTLVSA 1161 Query: 897 FSDADWAGCIDGRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWL 1076 FSDADWAG +D R+STGG V+ GSNLV WS++KQ VSRSS ESEY+ALAN TAE++W+ Sbjct: 1162 FSDADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTESEYKALANATAELIWV 1221 Query: 1077 HSLCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKVAAKFINVGP 1256 L E+ I ++WCDN A L++NP FHARTKHIEVD HF R++VA K +++ Sbjct: 1222 QILLTEISIKSPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDYHFVRDRVAKKLLDIEY 1281 Query: 1257 ISGQEQVADIFTKPLTTEHFEFLRSKL 1337 + +QVAD FTKPL+ E + L Sbjct: 1282 VPTGDQVADGFTKPLSVRLLENFKVNL 1308 >gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 900 Score = 452 bits (1162), Expect = e-124 Identities = 233/456 (51%), Positives = 299/456 (65%), Gaps = 11/456 (2%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 +D+ KARLVA+GF+Q IDY +TFSPVVK TIRLV S+A ++ W ++QLDV NAFL+G Sbjct: 441 IDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRLVLSIAMSQGWSLRQLDVQNAFLHG 500 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLFNLGFQRCTSDF 362 L++ +YM QP GFED+ P ++CKL+K+LYGLKQAPRAWY L K L LGF +D Sbjct: 501 YLDEEVYMRQPPGFEDARQPHFLCKLDKALYGLKQAPRAWYSRLSKKLQELGFSSSKADT 560 Query: 363 SLFYKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVDC 542 SLF+ AV ++ L+++F LK LG + YFLGIEV Sbjct: 561 SLFFYNKGHHKMFVLVYVDDIIVASSSSPAVNALLKDLEKDFALKDLGDLHYFLGIEVKR 620 Query: 543 SNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPF--SNPRLYRSTVGA 716 + L Q +Y ELLE+ NM CKP STP++ KLS G S+ YRS VGA Sbjct: 621 TPQTLLLSQERYTTELLERVNMTSCKPVSTPLSTAEKLSVEIGDELGPSDVTQYRSIVGA 680 Query: 717 LQYLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIEA 896 LQYLTLTRPDI+YSVNK+ QFLQ+P HW++ KR+LRYLKGT L L+ SSS+ + A Sbjct: 681 LQYLTLTRPDISYSVNKVCQFLQTPTTAHWSAVKRILRYLKGTLDLGLKIVKSSSNLVSA 740 Query: 897 FSDADWAGCID---------GRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALA 1049 FSDADWAG +D RRSTGG V+FG NL+ WS++KQ VSRSS E+EY+ALA Sbjct: 741 FSDADWAGSVDDRRSTGGFADRRSTGGFAVFFGDNLISWSARKQATVSRSSTEAEYKALA 800 Query: 1050 NVTAEVVWLHSLCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKV 1229 N AE++W+ L ELGI + ++WCDN A + +NP FHARTKHIEVD HF RE+V Sbjct: 801 NAAAEIIWVRKLLTELGILHPNAARLWCDNLGATYMTANPVFHARTKHIEVDYHFVREQV 860 Query: 1230 AAKFINVGPISGQEQVADIFTKPLTTEHFEFLRSKL 1337 A K +++ +S Q+QVAD FTKP++ + R L Sbjct: 861 AQKLLDIHFVSSQDQVADGFTKPISLQQLIGFRHNL 896 >gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group] gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1256 Score = 451 bits (1159), Expect = e-124 Identities = 230/447 (51%), Positives = 297/447 (66%), Gaps = 2/447 (0%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 LD+ KARLVA+GF+Q IDY +TFSPVVK TIR++ S+A +R W ++QLDV NAFL+G Sbjct: 805 LDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWTLRQLDVQNAFLHG 864 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLFNLGFQRCTSDF 362 +LE+ +YM QP G+ED +PDYVCKL+K+LYGLKQAPRAWY L + L +LGFQ +D Sbjct: 865 ILEEEVYMKQPPGYEDKVHPDYVCKLDKALYGLKQAPRAWYAKLSQKLQHLGFQGSKADT 924 Query: 363 SLFYKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVDC 542 SLF+ +DAV ++ LQ++F LK LG + YFLGIEV+ Sbjct: 925 SLFFYNKGGLIIFVLVYVDDIIVASSRQDAVPALLKDLQKDFALKDLGDLHYFLGIEVNK 984 Query: 543 SNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPF--SNPRLYRSTVGA 716 ++S L Q KY+ +LL + M DCKP STP++ + KL+ EG ++ YRS VGA Sbjct: 985 ASSGIVLTQEKYVTDLLRRVGMTDCKPVSTPLSTSEKLTLHEGDLLGPNDASNYRSVVGA 1044 Query: 717 LQYLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIEA 896 LQYLTLTRPDI + VNK+ QFL +P HW + KR+LRYLK L L+ + S S + Sbjct: 1045 LQYLTLTRPDIYFPVNKVCQFLHAPTIVHWAAMKRILRYLKQCTKLGLKISKSKSMLVSG 1104 Query: 897 FSDADWAGCIDGRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWL 1076 +SDADWAG ID RRSTGG V+ G NLV W++KKQ V RSS ESEY+ALAN TAE++W+ Sbjct: 1105 YSDADWAGNIDDRRSTGGFAVFLGDNLVSWNAKKQATVPRSSTESEYKALANATAEIMWI 1164 Query: 1077 HSLCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKVAAKFINVGP 1256 +L EL +P ++WCDN A L+SNP FHARTKHIEVD HF RE++ K + V Sbjct: 1165 QTLLEELSVPSPPMARLWCDNLGAKYLSSNPVFHARTKHIEVDYHFVRERMQRKLLEVEF 1224 Query: 1257 ISGQEQVADIFTKPLTTEHFEFLRSKL 1337 I +QVAD FTK L+ E + L Sbjct: 1225 IPTGDQVADGFTKALSARQLENFKYNL 1251 >gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group] gi|31433472|gb|AAP54977.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1031 Score = 450 bits (1158), Expect = e-124 Identities = 231/447 (51%), Positives = 297/447 (66%), Gaps = 2/447 (0%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 LD+ KARLVA+GF+Q IDY +TF PVVK TIR + S+A +R W ++QLDV NAFL+G Sbjct: 581 LDRYKARLVAKGFKQRYGIDYEDTFRPVVKAATIRTILSIAISRGWTLRQLDVQNAFLHG 640 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLFNLGFQRCTSDF 362 VLE++++M QP G+E YVCKL+K+LYGLKQAPRAWY L L LGF+ SD Sbjct: 641 VLEEDVFMRQPPGYEQKD--GYVCKLDKALYGLKQAPRAWYSRLSTKLHELGFKSSKSDT 698 Query: 363 SLFYKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVDC 542 SLF+ + A ++ L QEF LK LG++ YFLGIEV Sbjct: 699 SLFFYSKGDVTIFMLVYVDDIIVASSSIVATNALLKNLNQEFALKDLGRLHYFLGIEVKE 758 Query: 543 SNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPFS--NPRLYRSTVGA 716 N L Q KY ++L++ NM DCK +TP++++ KLS EG P + YRS VGA Sbjct: 759 VNDGIVLTQEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHEGNPLGPEDSTRYRSLVGA 818 Query: 717 LQYLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIEA 896 LQYLTLTRPD+++SVNK+ Q+L + +HW + KR+LRYLK T L L+ + S+S + A Sbjct: 819 LQYLTLTRPDLSFSVNKVCQYLHAATTKHWVAAKRILRYLKHTVKLGLKISKSNSLLVSA 878 Query: 897 FSDADWAGCIDGRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWL 1076 FSDADWAGC+D RRSTGG V+ G NLV WS++KQ VSRSS E+EY+ALAN TAE++W+ Sbjct: 879 FSDADWAGCLDDRRSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWI 938 Query: 1077 HSLCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKVAAKFINVGP 1256 +L ELGI V +VWCDN A + +NP FHARTKHIEVD HF RE+VA K + V Sbjct: 939 QTLLHELGIQVPKIAKVWCDNIGAKYMTANPVFHARTKHIEVDYHFVRERVARKLLQVEY 998 Query: 1257 ISGQEQVADIFTKPLTTEHFEFLRSKL 1337 IS ++QVAD FTK L+ E R+ L Sbjct: 999 ISTKDQVADGFTKTLSVRQLEMFRNNL 1025 >emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] Length = 1434 Score = 450 bits (1157), Expect = e-124 Identities = 233/445 (52%), Positives = 300/445 (67%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 +D+ KARLVA+GF Q IDY +TFSPVVK TIRL+ +LA + W ++QLDV NAFLNG Sbjct: 916 IDRHKARLVAQGFTQTPGIDYFDTFSPVVKPCTIRLILALAVSFQWSVRQLDVENAFLNG 975 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLFNLGFQRCTSDF 362 LE+ ++M QP GF + TYP YVCKL K+LYGLKQAPRAW+ L+ L + GFQ +D Sbjct: 976 DLEEEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQSSRADT 1035 Query: 363 SLFYKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVDC 542 SLF ++T TG + V IS L+ +F L+ LG +SYFLGI+ Sbjct: 1036 SLFIFHTATDILILLVYVDDILVTGSNPMLVSHFISYLRTKFALRDLGPLSYFLGIQAQQ 1095 Query: 543 SNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPFSNPRLYRSTVGALQ 722 S L Q KYI +LL +T M KP TP + LS+ +G S+P YR TVGALQ Sbjct: 1096 LGSVLHLNQHKYIADLLNRTQMETSKPAPTPGRLGRTLSQSDGMSLSDPSEYRRTVGALQ 1155 Query: 723 YLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIEAFS 902 Y+TLTRPDIA++VNK QF+ P + HW + KR+LRYLKGT L L F P++S ++ +S Sbjct: 1156 YVTLTRPDIAFAVNKACQFMAKPSDVHWMAVKRILRYLKGTIHLGLHFQPAASMELQGYS 1215 Query: 903 DADWAGCIDGRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWLHS 1082 DADWA C D RRST G+CV+ GSNL+ WSS KQ +VS+SSAESEYR L ++TAE+VW+ S Sbjct: 1216 DADWASCPDDRRSTSGYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQS 1275 Query: 1083 LCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKVAAKFINVGPIS 1262 L EL +P +SP +WCDN SA LA+NP FH+R+KHIE+D+HF REKV + + + + Sbjct: 1276 LLQELCLP-TSPPILWCDNQSAAHLAANPVFHSRSKHIELDLHFIREKVLRQELQICYVP 1334 Query: 1263 GQEQVADIFTKPLTTEHFEFLRSKL 1337 +Q+ADIFTK L F LRSKL Sbjct: 1335 SGDQLADIFTKHLPITQFCNLRSKL 1359 >pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch gi|531389|gb|AAA57005.1| copia-like retrotransposon Hopscotch polyprotein [Zea mays] Length = 1439 Score = 447 bits (1151), Expect = e-123 Identities = 230/437 (52%), Positives = 300/437 (68%), Gaps = 3/437 (0%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 +D+LKARLVA+GF+Q IDY++TFSPVVK +TIRLV SLA ++ W ++QLDV NAFL+G Sbjct: 982 IDRLKARLVAKGFKQQYGIDYDDTFSPVVKHSTIRLVLSLAVSQKWSLRQLDVQNAFLHG 1041 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLFNLGFQRCTSDF 362 +LE+ +YM QP GF D+T+P+Y C L+KSLYGLKQ PRAWY L + L +LGF +D Sbjct: 1042 ILEETVYMKQPPGFADTTHPNYHCHLQKSLYGLKQRPRAWYSRLSEKLQSLGFVPSKADV 1101 Query: 363 SLF-YKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVD 539 SLF Y A ST TG A+ V++ L+ +F +K LG + YFLGIEV Sbjct: 1102 SLFIYNAHSTAIYILVYVDDIII-TGSSPHAIDNVLAKLKDDFAIKDLGDLHYFLGIEVH 1160 Query: 540 CSNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPFSNPRL--YRSTVG 713 LCQ KY +LL++ M CKP TP+A + KLS G S YRS VG Sbjct: 1161 RKGDGLLLCQEKYARDLLKRVGMECCKPVHTPVATSEKLSASAGTLLSPEETTKYRSVVG 1220 Query: 714 ALQYLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIE 893 ALQYLTLTRPD++Y++N++ QFL +P + HWT+ KR+LR ++ T L L PS S + Sbjct: 1221 ALQYLTLTRPDLSYAINRVCQFLHAPTDLHWTAVKRILRNIQHTIGLGLTIRPSLSLMLS 1280 Query: 894 AFSDADWAGCIDGRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVW 1073 AFSDADWAGC D R+STGG+ ++ G NL+ W+SKKQ VSRSS E+EY+A+AN TAEV+W Sbjct: 1281 AFSDADWAGCPDDRKSTGGYALFLGPNLISWNSKKQSTVSRSSTEAEYKAMANATAEVIW 1340 Query: 1074 LHSLCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKVAAKFINVG 1253 L SL ELGI ++ ++WCDN A L+S P F+ARTKHIEVD HF R++V +K +++ Sbjct: 1341 LQSLLHELGIRLTGIPRLWCDNLGATYLSSKPIFNARTKHIEVDFHFVRDRVLSKKLDIR 1400 Query: 1254 PISGQEQVADIFTKPLT 1304 IS +QVAD FTK LT Sbjct: 1401 LISTNDQVADGFTKALT 1417 >emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera] Length = 773 Score = 447 bits (1151), Expect = e-123 Identities = 232/445 (52%), Positives = 298/445 (66%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 +D+ KARLVA+GF Q IDY +TFSPVVK TIRL+ +LA + W ++QLDV N FLNG Sbjct: 263 IDRHKARLVAQGFTQTPGIDYFDTFSPVVKPCTIRLILALAVSFQWSVRQLDVENGFLNG 322 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLFNLGFQRCTSDF 362 LE+ ++M QP GF + TYP YVCKL K+LYGLKQAPRAW+ L+ L + GFQ +D Sbjct: 323 DLEEEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQSSRADT 382 Query: 363 SLFYKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVDC 542 SLF ++T TG + V IS L+ +F L+ LG +SYFLGI+ Sbjct: 383 SLFIFHTATDILILLVYVDDILVTGSNPTLVSHFISYLRTKFALRDLGPLSYFLGIQAQQ 442 Query: 543 SNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPFSNPRLYRSTVGALQ 722 S L Q KYI +LL +T M KP TP + LS+ +G S+P YR TVGALQ Sbjct: 443 LGSVLHLNQHKYIADLLNRTQMETSKPAPTPGRLGRTLSQSDGVSLSDPSEYRRTVGALQ 502 Query: 723 YLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIEAFS 902 Y+TLTRPDIA++VNK QF+ P + HW + KR+LRYLKGT L L F P++S + +S Sbjct: 503 YVTLTRPDIAFAVNKACQFMAKPSDVHWMAVKRILRYLKGTIHLGLHFQPAASMEXQGYS 562 Query: 903 DADWAGCIDGRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWLHS 1082 DADWA C D RRST G+CV+ GSNL+ WSS KQ +VS+SSAESEYR L ++TAE+VW+ S Sbjct: 563 DADWASCPDDRRSTSGYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQS 622 Query: 1083 LCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKVAAKFINVGPIS 1262 L EL +P +SP +WCDN SA LA+NP FH+R+KHIE+D+HF REKV + + + + Sbjct: 623 LLQELCLP-TSPPILWCDNQSAAHLAANPVFHSRSKHIELDLHFIREKVLRQELQICYVP 681 Query: 1263 GQEQVADIFTKPLTTEHFEFLRSKL 1337 +Q+ADIFTK L F LRSKL Sbjct: 682 SGDQLADIFTKHLPITQFCNLRSKL 706 >dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza sativa Japonica Group] Length = 1448 Score = 443 bits (1139), Expect = e-122 Identities = 223/447 (49%), Positives = 295/447 (65%), Gaps = 2/447 (0%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 LD+ K RL+A+GF+Q IDY +TFSPVVK TIR++ S+A +R W ++QLDV N FL+G Sbjct: 997 LDRYKTRLIAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNDFLHG 1056 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLFNLGFQRCTSDF 362 LE+ +YM QP GFE S+ PDYVCKL K+LYGLKQAPRAWY L K L LGF+ +D Sbjct: 1057 FLEEEVYMQQPPGFESSSKPDYVCKLNKALYGLKQAPRAWYSRLSKKLTELGFEASKADT 1116 Query: 363 SLFYKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVDC 542 SLF+ + A ++ L +EF LK LG + YFLGIEV Sbjct: 1117 SLFFLNKGGIIMFVLVYVDDIIVASSTEKATTALLKDLNKEFTLKDLGDLHYFLGIEVTK 1176 Query: 543 SNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPF--SNPRLYRSTVGA 716 ++ L Q KY +++L++ NM +CKP STP++V+ KL+ +EG P ++ YRS VGA Sbjct: 1177 VSNGVILTQEKYANDMLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGA 1236 Query: 717 LQYLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIEA 896 LQYLTLTRPDIAYSVNK+ QFL +P HW + KR+LRYL SL L S+S+ + Sbjct: 1237 LQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGLHVHKSASTLVHG 1296 Query: 897 FSDADWAGCIDGRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWL 1076 +SDAD AG ID R+STGG V+ GSNLV WS++KQ VSRSS E+EY+A+AN TAE++W+ Sbjct: 1297 YSDADGAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWV 1356 Query: 1077 HSLCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKVAAKFINVGP 1256 ++ ELGI ++WCDN A L++NP FHA+TKHI VD HF RE+V+ K + + Sbjct: 1357 QTVLKELGIESPKAAKIWCDNLGAKYLSANPVFHAKTKHIHVDYHFVRERVSQKLLEIDF 1416 Query: 1257 ISGQEQVADIFTKPLTTEHFEFLRSKL 1337 + +QVAD FTK L+ E + L Sbjct: 1417 VPSGDQVADGFTKALSARLLENFKHNL 1443 >gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] Length = 1621 Score = 442 bits (1137), Expect = e-121 Identities = 220/419 (52%), Positives = 286/419 (68%), Gaps = 2/419 (0%) Frame = +3 Query: 3 LDKLKARLVARGFEQLAVIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDVNNAFLNG 182 LD+ KARLVA+GF+Q IDY +TFSPVVK TIR++ SLA ++ W ++QLDV NAFL+G Sbjct: 724 LDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHG 783 Query: 183 VLEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKPLFNLGFQRCTSDF 362 LE+ +YM QP GFED T P +VCKL+K+LYGLKQAPRAW+ L K L +LGF+ +D Sbjct: 784 YLEEEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADT 843 Query: 363 SLFYKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGQVSYFLGIEVDC 542 SLF+ + A ++ L+ EF LK LG++ YFLGIEV Sbjct: 844 SLFFLNKGDITMFVLVYVDDIIVASSSEKATAALLQNLKGEFALKDLGELHYFLGIEVSK 903 Query: 543 SNSEFRLCQRKYIHELLEKTNMLDCKPCSTPMAVNTKLSRFEGKPFS--NPRLYRSTVGA 716 + L Q KY ++LL+K M+DCKP +TP++V+ KLS EG + YRS VGA Sbjct: 904 VQNGIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGA 963 Query: 717 LQYLTLTRPDIAYSVNKLSQFLQSPFEEHWTSCKRLLRYLKGTDSLALQFTPSSSSCIEA 896 LQYLTLTRPDIA+SVNK+ QFL +P HW + KR+LRYLK L L+ S S+ + Sbjct: 964 LQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSG 1023 Query: 897 FSDADWAGCIDGRRSTGGHCVYFGSNLVVWSSKKQDVVSRSSAESEYRALANVTAEVVWL 1076 FSDADWAGC+D RRSTGG ++ GSNLV W+++KQ VSRSS ESEY+A+AN TAE++W+ Sbjct: 1024 FSDADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWV 1083 Query: 1077 HSLCLELGIPVSSPHQVWCDNCSAVALASNPAFHARTKHIEVDVHFTREKVAAKFINVG 1253 +L EL I ++WCDN A L++NP FHARTKHIEVD HF RE++ ++FIN+G Sbjct: 1084 QTLLAELEIKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERLLSRFINLG 1142