BLASTX nr result
ID: Mentha25_contig00009208
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00009208
(566 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus... 348 6e-94
gb|AAY89349.1| RNA polymerase II largest subunit [Antirrhinum ma... 347 2e-93
emb|CBI18915.3| unnamed protein product [Vitis vinifera] 346 2e-93
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 346 2e-93
gb|ACD63083.1| RNA polymerase II largest subunit [Ceratophyllum ... 346 3e-93
gb|ACD63082.1| RNA polymerase II largest subunit [Beta vulgaris] 346 3e-93
gb|AAQ08516.1| RNA polymerase II largest subunit [Magnolia x sou... 346 3e-93
gb|ACD63085.1| RNA polymerase II largest subunit [Illicium parvi... 345 4e-93
gb|AAQ08517.1| RNA polymerase II largest subunit [Nymphaea odorata] 345 6e-93
ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [A... 344 1e-92
gb|ACD63086.1| RNA polymerase II largest subunit [Liriodendron t... 344 1e-92
gb|AAQ08518.1| RNA polymerase II largest subunit [Amborella tric... 344 1e-92
gb|ACD63091.1| RNA polymerase II largest subunit [Saruma henryi] 341 9e-92
gb|ACD63089.1| RNA polymerase II largest subunit [Persea americana] 340 2e-91
gb|ACD63087.1| RNA polymerase II largest subunit [Nicotiana taba... 339 3e-91
ref|XP_006383037.1| DNA-directed RNA polymerase II largest subun... 339 3e-91
gb|EXC35292.1| DNA-directed RNA polymerase II subunit rpb1 [Moru... 338 8e-91
gb|EEC82922.1| hypothetical protein OsI_27866 [Oryza sativa Indi... 338 8e-91
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su... 337 1e-90
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su... 337 1e-90
>gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus guttatus]
Length = 1842
Score = 348 bits (893), Expect = 6e-94
Identities = 174/188 (92%), Positives = 180/188 (95%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWHQE EKGFITPGDTQVRIEKGELL+GTLCKK LG+S+GSLIHVIWEEVGPDAARKFLG
Sbjct: 606 AWHQETEKGFITPGDTQVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLG 665
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQNAFSMGIGDTIAD TM KI+ETI+ AKNEV ELIRAAQEKQLE EPG
Sbjct: 666 HTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEPEPG 725
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 726 RTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQ 785
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 786 QNVEGKRI 793
>gb|AAY89349.1| RNA polymerase II largest subunit [Antirrhinum majus]
Length = 780
Score = 347 bits (889), Expect = 2e-93
Identities = 173/188 (92%), Positives = 179/188 (95%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWHQE EKGFITPGDTQVRIEKGELL+GTLCKKTLG+ +GSLIHVIWEEVGPDAARKFLG
Sbjct: 283 AWHQEKEKGFITPGDTQVRIEKGELLTGTLCKKTLGTGTGSLIHVIWEEVGPDAARKFLG 342
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQNAFS+GIGDTIAD TM KI+ETI AKNEV ELIRAAQEKQLEAEPG
Sbjct: 343 HTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETIQNAKNEVKELIRAAQEKQLEAEPG 402
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFENRVNQVLNKARDDAGSSAQKSL+E NNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 403 RTMMESFENRVNQVLNKARDDAGSSAQKSLSEHNNLKAMVTAGSKGSFINISQMTACVGQ 462
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 463 QNVEGKRI 470
>emb|CBI18915.3| unnamed protein product [Vitis vinifera]
Length = 1565
Score = 346 bits (888), Expect = 2e-93
Identities = 172/188 (91%), Positives = 180/188 (95%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWH E E GFITPGDTQVRIEKGELL+GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLG
Sbjct: 654 AWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLG 713
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQN FS+GIGDTIAD TM KI+ETI+KAKNEV ELIRAAQE+QLEAEPG
Sbjct: 714 HTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQLEAEPG 773
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 774 RTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQ 833
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 834 QNVEGKRI 841
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
vinifera]
Length = 1848
Score = 346 bits (888), Expect = 2e-93
Identities = 172/188 (91%), Positives = 180/188 (95%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWH E E GFITPGDTQVRIEKGELL+GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLG
Sbjct: 606 AWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLG 665
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQN FS+GIGDTIAD TM KI+ETI+KAKNEV ELIRAAQE+QLEAEPG
Sbjct: 666 HTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQLEAEPG 725
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 726 RTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQ 785
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 786 QNVEGKRI 793
>gb|ACD63083.1| RNA polymerase II largest subunit [Ceratophyllum demersum]
Length = 1010
Score = 346 bits (887), Expect = 3e-93
Identities = 171/188 (90%), Positives = 180/188 (95%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWH E E GFITPGDTQVRIE+GELL+GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLG
Sbjct: 525 AWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLG 584
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQN FS+GIGDTIAD TM KI+ETI+KAKNEV ELI+AAQEKQLEAEPG
Sbjct: 585 HTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETISKAKNEVKELIKAAQEKQLEAEPG 644
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 645 RTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQ 704
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 705 QNVEGKRI 712
>gb|ACD63082.1| RNA polymerase II largest subunit [Beta vulgaris]
Length = 1012
Score = 346 bits (887), Expect = 3e-93
Identities = 171/188 (90%), Positives = 180/188 (95%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWH E E GFITPGDTQVRIE+GELL+GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLG
Sbjct: 527 AWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLG 586
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQN FS+GIGDTIAD TM KI+ETI+KAKNEV ELI+AAQEKQLEAEPG
Sbjct: 587 HTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETISKAKNEVKELIKAAQEKQLEAEPG 646
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 647 RTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQ 706
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 707 QNVEGKRI 714
>gb|AAQ08516.1| RNA polymerase II largest subunit [Magnolia x soulangeana]
Length = 1010
Score = 346 bits (887), Expect = 3e-93
Identities = 171/188 (90%), Positives = 180/188 (95%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWH E E GFITPGDTQVRIE+GELL+GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLG
Sbjct: 525 AWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLG 584
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQN FS+GIGDTIAD TM KI+ETI+KAKNEV ELI+AAQEKQLEAEPG
Sbjct: 585 HTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETISKAKNEVKELIKAAQEKQLEAEPG 644
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 645 RTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQ 704
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 705 QNVEGKRI 712
>gb|ACD63085.1| RNA polymerase II largest subunit [Illicium parviflorum]
Length = 1013
Score = 345 bits (886), Expect = 4e-93
Identities = 172/188 (91%), Positives = 179/188 (95%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWH E E GFITPGDT VRIEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLG
Sbjct: 528 AWHSESETGFITPGDTHVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLG 587
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQN FS+GIGDTIAD TM KI+ETI+KAKNEV ELI+AAQEKQLEAEPG
Sbjct: 588 HTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIKAAQEKQLEAEPG 647
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 648 RTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQ 707
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 708 QNVEGKRI 715
>gb|AAQ08517.1| RNA polymerase II largest subunit [Nymphaea odorata]
Length = 1013
Score = 345 bits (884), Expect = 6e-93
Identities = 171/188 (90%), Positives = 180/188 (95%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWH E E GFITPGDT VRIE+GELLSGTLCKKT+G+SSGSLIHVIWEEVGPDAARKFLG
Sbjct: 528 AWHSESETGFITPGDTCVRIERGELLSGTLCKKTMGTSSGSLIHVIWEEVGPDAARKFLG 587
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQNAFS+GIGDTIAD TM KI+ETI+KAKNEV ELI+AAQEKQLEAEPG
Sbjct: 588 HTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKNEVKELIKAAQEKQLEAEPG 647
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFENRVNQVLNKARDDAGSSAQ+SL+ESNNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 648 RTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVTAGSKGSFINISQMTACVGQ 707
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 708 QNVEGKRI 715
>ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [Amborella trichopoda]
gi|548833823|gb|ERM96260.1| hypothetical protein
AMTR_s00001p00152770 [Amborella trichopoda]
Length = 1844
Score = 344 bits (882), Expect = 1e-92
Identities = 172/188 (91%), Positives = 179/188 (95%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWH E E GFITPGDT VRIE+GELLSGTLCKKTLG+SSGSLIHVIWEEVGPDAARKFLG
Sbjct: 609 AWHSESESGFITPGDTCVRIERGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAARKFLG 668
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQ AFS+GIGDTIAD TM KI+ETI+KAKNEV ELI+AAQEKQLEAEPG
Sbjct: 669 HTQWLVNYWLLQQAFSIGIGDTIADAATMEKINETISKAKNEVKELIKAAQEKQLEAEPG 728
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 729 RTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQ 788
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 789 QNVEGKRI 796
>gb|ACD63086.1| RNA polymerase II largest subunit [Liriodendron tulipifera]
Length = 1010
Score = 344 bits (882), Expect = 1e-92
Identities = 170/188 (90%), Positives = 180/188 (95%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWH E E GFITPGDTQVRIE+GELL+GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLG
Sbjct: 525 AWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLG 584
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQN FS+GIGDTIAD TM KI+ETI+KAKNEV ELI+AAQ+KQLEAEPG
Sbjct: 585 HTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIKAAQDKQLEAEPG 644
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 645 RTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQ 704
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 705 QNVEGKRI 712
>gb|AAQ08518.1| RNA polymerase II largest subunit [Amborella trichopoda]
Length = 1013
Score = 344 bits (882), Expect = 1e-92
Identities = 172/188 (91%), Positives = 179/188 (95%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWH E E GFITPGDT VRIE+GELLSGTLCKKTLG+SSGSLIHVIWEEVGPDAARKFLG
Sbjct: 528 AWHSESESGFITPGDTCVRIERGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAARKFLG 587
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQ AFS+GIGDTIAD TM KI+ETI+KAKNEV ELI+AAQEKQLEAEPG
Sbjct: 588 HTQWLVNYWLLQQAFSIGIGDTIADAATMEKINETISKAKNEVKELIKAAQEKQLEAEPG 647
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 648 RTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQ 707
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 708 QNVEGKRI 715
>gb|ACD63091.1| RNA polymerase II largest subunit [Saruma henryi]
Length = 1009
Score = 341 bits (874), Expect = 9e-92
Identities = 169/188 (89%), Positives = 178/188 (94%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWH E E GFITPGDTQVRIE+GELL+GTLCKK LG+S+GSLIHVIWEEVGPDAARKFLG
Sbjct: 524 AWHAESETGFITPGDTQVRIERGELLAGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLG 583
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQNAFS+GIGDTIAD TM KI++TI KAKNEV ELI+AA EKQLEAEPG
Sbjct: 584 HTQWLVNYWLLQNAFSIGIGDTIADAATMEKINDTITKAKNEVKELIKAAHEKQLEAEPG 643
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 644 RTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQ 703
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 704 QNVEGKRI 711
>gb|ACD63089.1| RNA polymerase II largest subunit [Persea americana]
Length = 1009
Score = 340 bits (871), Expect = 2e-91
Identities = 169/188 (89%), Positives = 178/188 (94%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWH E E GFITPGDTQVRIEKGELL+GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLG
Sbjct: 524 AWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLG 583
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQN FS+GIGDTIAD TM KI+ETI KAK+EV +LI+AAQEK LEAEPG
Sbjct: 584 HTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKSLEAEPG 643
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 644 RTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQ 703
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 704 QNVEGKRI 711
>gb|ACD63087.1| RNA polymerase II largest subunit [Nicotiana tabacum]
Length = 1010
Score = 339 bits (870), Expect = 3e-91
Identities = 168/188 (89%), Positives = 180/188 (95%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWH + EKG ITPGDTQVRIEKGELL+GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLG
Sbjct: 525 AWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLG 584
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQNAFS+GIGDTIAD TM KI+ETI+ AK++V ELI+AAQEKQLEAEPG
Sbjct: 585 HTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQLEAEPG 644
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFENRVNQVLNKARDDAGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 645 RTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQ 704
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 705 QNVEGKRI 712
>ref|XP_006383037.1| DNA-directed RNA polymerase II largest subunit family protein
[Populus trichocarpa] gi|550338614|gb|ERP60834.1|
DNA-directed RNA polymerase II largest subunit family
protein [Populus trichocarpa]
Length = 1837
Score = 339 bits (869), Expect = 3e-91
Identities = 168/188 (89%), Positives = 177/188 (94%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWH + E+G ITPGDT VRIEKGELLSGTLCKKTLG+SSGSLIHVIWEEVGPDAARKFLG
Sbjct: 606 AWHMDSERGMITPGDTLVRIEKGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAARKFLG 665
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQNAFS+GIGDTIAD TM KI+ETI+ AKNEV +LIR AQ K+LEAEPG
Sbjct: 666 HTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKNEVKDLIRKAQNKELEAEPG 725
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 726 RTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQ 785
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 786 QNVEGKRI 793
>gb|EXC35292.1| DNA-directed RNA polymerase II subunit rpb1 [Morus notabilis]
Length = 1866
Score = 338 bits (866), Expect = 8e-91
Identities = 167/188 (88%), Positives = 177/188 (94%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWH E E G+ITPGDT VRIEKGELLSGTLCKKTLG+SSGSLIHVIWEEVGPDAARKFLG
Sbjct: 621 AWHAESESGYITPGDTLVRIEKGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAARKFLG 680
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQN FS+GIGDTIAD TM KI+ETI++AKN+V ELIR AQ K+LEAEPG
Sbjct: 681 HTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETISRAKNDVKELIRKAQAKELEAEPG 740
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFEN+VNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 741 RTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQ 800
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 801 QNVEGKRI 808
>gb|EEC82922.1| hypothetical protein OsI_27866 [Oryza sativa Indica Group]
Length = 1449
Score = 338 bits (866), Expect = 8e-91
Identities = 167/188 (88%), Positives = 177/188 (94%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWH E E GFITPGDT VRIEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLG
Sbjct: 576 AWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLG 635
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQN FS+GIGDTIAD TM KI+ETI+KAK++V ELI+ A +KQLEAEPG
Sbjct: 636 HTQWLVNYWLLQNGFSIGIGDTIADAATMVKINETISKAKDDVKELIKQAHDKQLEAEPG 695
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 696 RTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQ 755
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 756 QNVEGKRI 763
>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum
tuberosum]
Length = 1839
Score = 337 bits (864), Expect = 1e-90
Identities = 167/188 (88%), Positives = 178/188 (94%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWH + EKG+ITPGDTQVRIEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLG
Sbjct: 606 AWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLG 665
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQ AFS+GIGDTIAD TM KI+ETI+ AK +V ELI+AAQEK LEAEPG
Sbjct: 666 HTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLLEAEPG 725
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFENRVNQVLNKARDDAGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 726 RTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQ 785
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 786 QNVEGKRI 793
>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Solanum
lycopersicum]
Length = 1846
Score = 337 bits (864), Expect = 1e-90
Identities = 167/188 (88%), Positives = 178/188 (94%)
Frame = -1
Query: 566 AWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLG 387
AWH + EKG+ITPGDTQVRIEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLG
Sbjct: 606 AWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLG 665
Query: 386 HTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPG 207
HTQWLVNYWLLQ AFS+GIGDTIAD TM KI+ETI+ AK +V ELI+AAQEK LEAEPG
Sbjct: 666 HTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLLEAEPG 725
Query: 206 RTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQ 27
RTMMESFENRVNQVLNKARDDAGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMTACVGQ
Sbjct: 726 RTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQ 785
Query: 26 QNVEGKRI 3
QNVEGKRI
Sbjct: 786 QNVEGKRI 793