BLASTX nr result
ID: Mentha25_contig00007809
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00007809
(1182 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU20574.1| hypothetical protein MIMGU_mgv1a000984mg [Mimulus... 707 0.0
gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlise... 688 0.0
ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S... 668 0.0
emb|CBI37517.3| unnamed protein product [Vitis vinifera] 664 0.0
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ... 664 0.0
ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [S... 662 0.0
ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [F... 657 0.0
gb|EXB95897.1| DNA topoisomerase 3-alpha [Morus notabilis] 657 0.0
ref|XP_007048481.1| Topoisomerase 3alpha isoform 2, partial [The... 653 0.0
ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma ca... 653 0.0
ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [C... 651 0.0
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric... 649 0.0
ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Popu... 639 0.0
ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C... 633 e-179
ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [C... 623 e-176
ref|XP_006432122.1| hypothetical protein CICLE_v10003112mg, part... 622 e-175
ref|XP_003558748.1| PREDICTED: DNA topoisomerase 3-alpha [Brachy... 617 e-174
ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [O... 613 e-173
ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana] gi|... 613 e-173
ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arab... 611 e-172
>gb|EYU20574.1| hypothetical protein MIMGU_mgv1a000984mg [Mimulus guttatus]
Length = 923
Score = 707 bits (1825), Expect = 0.0
Identities = 338/380 (88%), Positives = 353/380 (92%)
Frame = +2
Query: 41 TCLRIQQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHH 220
T ++ QQGHP WG+YAQRLLDPEA LWRNPS+GGHDDKAHPPIHPTKFSAGESGWSQDHH
Sbjct: 361 TIVQEQQGHPTWGSYAQRLLDPEAGLWRNPSSGGHDDKAHPPIHPTKFSAGESGWSQDHH 420
Query: 221 KVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSVI 400
KVYELVVRHFLACVSQPAIGA TTV+IDIAGEQFSASG VI+AKNYLDVYRFETWGGS+I
Sbjct: 421 KVYELVVRHFLACVSQPAIGAVTTVDIDIAGEQFSASGTVILAKNYLDVYRFETWGGSMI 480
Query: 401 PTYQYEQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKKLLDRCYA 580
PTY Y QQFTPT LTLDSGVTRPPPLLSEADLLSCMD A IGTDATMHDHIKKLLDR YA
Sbjct: 481 PTYNYGQQFTPTTLTLDSGVTRPPPLLSEADLLSCMDNAGIGTDATMHDHIKKLLDRFYA 540
Query: 581 TKDSNMRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDEVLATCLQ 760
TKDSNMRFSPTKLGEALV GYD+MG+ELWKP LRA MESDM AVS G KRK EVL +CLQ
Sbjct: 541 TKDSNMRFSPTKLGEALVKGYDDMGYELWKPNLRAMMESDMKAVSMGTKRKSEVLDSCLQ 600
Query: 761 QMKACFLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDMVLRKKPD 940
QMKACF+DARLNK KLFEAM VFFERSNR+ G+EQ IGEVVRKCGLCQESDMVLRKKPD
Sbjct: 601 QMKACFVDARLNKEKLFEAMDVFFERSNRANGNEQQAIGEVVRKCGLCQESDMVLRKKPD 660
Query: 941 GNFMVGCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEIPPDYNVN 1120
GNFMVGCLGYPQCRNVVWLPGSVSEA VTT ICSTCSPGPVYMIQFKFRRLEIPP+YNV+
Sbjct: 661 GNFMVGCLGYPQCRNVVWLPGSVSEATVTTTICSTCSPGPVYMIQFKFRRLEIPPNYNVD 720
Query: 1121 HLGCIGGCDDTLRQLVEICG 1180
HLGCIGGCDDTLRQLVEICG
Sbjct: 721 HLGCIGGCDDTLRQLVEICG 740
>gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlisea aurea]
Length = 813
Score = 688 bits (1775), Expect = 0.0
Identities = 326/385 (84%), Positives = 345/385 (89%)
Frame = +2
Query: 26 RISPKTCLRIQQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGESGW 205
R +T ++ QQGHP WG+YAQRLLDPE LW+NP GGHDDKAHPPIHPTKFS+GESGW
Sbjct: 254 RTDLRTIVQEQQGHPAWGSYAQRLLDPETGLWKNPGAGGHDDKAHPPIHPTKFSSGESGW 313
Query: 206 SQDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETW 385
SQDHHKVYELVVRHFLACVSQPAIGAETTVEIDIA EQFSASGR IIAKNYLDVYRFE W
Sbjct: 314 SQDHHKVYELVVRHFLACVSQPAIGAETTVEIDIASEQFSASGRAIIAKNYLDVYRFEKW 373
Query: 386 GGSVIPTYQYEQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKKLL 565
GGS+IP Y Y QQF PT LTLDSGVTRPPPLLSEADLL CMDKA IGTDATMHDHIKKLL
Sbjct: 374 GGSLIPAYAYGQQFIPTTLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLL 433
Query: 566 DRCYATKDSNMRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDEVL 745
DRCYATKDSN RFSPTKLGEALVMGYD+MG+ELWKP LRA MESDM +VS G KRK EVL
Sbjct: 434 DRCYATKDSNTRFSPTKLGEALVMGYDDMGYELWKPHLRAMMESDMKSVSMGTKRKGEVL 493
Query: 746 ATCLQQMKACFLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDMVL 925
CLQQMKACFLDAR NK KLFEAMGVFFERSNRS ++QH G++VRKCGLCQESDMVL
Sbjct: 494 EACLQQMKACFLDARANKEKLFEAMGVFFERSNRSQTADQHMSGDIVRKCGLCQESDMVL 553
Query: 926 RKKPDGNFMVGCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEIPP 1105
RKKPDGNFMVGCLGYPQCRNVVWLPGSVS A VTT +CSTCSPGPVYMIQFKFR+LEIPP
Sbjct: 554 RKKPDGNFMVGCLGYPQCRNVVWLPGSVSSASVTTVVCSTCSPGPVYMIQFKFRQLEIPP 613
Query: 1106 DYNVNHLGCIGGCDDTLRQLVEICG 1180
+YNV+HLGC+GGCD LRQLVEICG
Sbjct: 614 NYNVDHLGCVGGCDSVLRQLVEICG 638
>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
Length = 915
Score = 668 bits (1723), Expect = 0.0
Identities = 316/381 (82%), Positives = 341/381 (89%)
Frame = +2
Query: 38 KTCLRIQQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDH 217
+T ++ Q+GHPVWG YAQRLLDP++ LWRNPS GGHDDKAHPPIHPTKFSAGE+ WSQDH
Sbjct: 359 RTMVQEQEGHPVWGIYAQRLLDPQSGLWRNPSGGGHDDKAHPPIHPTKFSAGETRWSQDH 418
Query: 218 HKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSV 397
H+VYELVVRHFLACVSQPA+GAET VEIDIAGE FSA GRVI+AKNYLDVYRFE+WGGSV
Sbjct: 419 HRVYELVVRHFLACVSQPAVGAETIVEIDIAGESFSACGRVILAKNYLDVYRFESWGGSV 478
Query: 398 IPTYQYEQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKKLLDRCY 577
IPTY + QQFTPT LTLDSGVTRPPPLLSEADLL CMDKA IGTDATMHDHIKKLLDR Y
Sbjct: 479 IPTYSFGQQFTPTTLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFY 538
Query: 578 ATKDSNMRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDEVLATCL 757
A KDSN RFSPTKLGEALVMGYD+MG+ELWKP LRA ME DM AVS G KRK EVL TCL
Sbjct: 539 AIKDSNTRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSIGTKRKAEVLETCL 598
Query: 758 QQMKACFLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDMVLRKKP 937
QQMKACF DAR NK KL EAM +FFERSNRS+G EQ +G+VVR+CGLC ESDMVLR+KP
Sbjct: 599 QQMKACFSDARTNKGKLLEAMAIFFERSNRSSGGEQQAVGDVVRRCGLCLESDMVLRQKP 658
Query: 938 DGNFMVGCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEIPPDYNV 1117
DGNFMVGCLGYPQCRNVVWLPGSVSEA VT N C++CSPGPV+ IQFKFRRLEIPP+Y+V
Sbjct: 659 DGNFMVGCLGYPQCRNVVWLPGSVSEASVTENTCTSCSPGPVFKIQFKFRRLEIPPNYSV 718
Query: 1118 NHLGCIGGCDDTLRQLVEICG 1180
HLGCIGGCDD LRQLVEICG
Sbjct: 719 QHLGCIGGCDDILRQLVEICG 739
>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 664 bits (1713), Expect = 0.0
Identities = 310/375 (82%), Positives = 341/375 (90%)
Frame = +2
Query: 56 QQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHHKVYEL 235
Q GHP+WG+YAQRLLDP A LWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDH ++YEL
Sbjct: 30 QLGHPIWGSYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHQRLYEL 89
Query: 236 VVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSVIPTYQY 415
VVRHFLACVSQPA+GAET VEIDIAGE FS+SGRVIIAKNYLDVYRFE+WGGS+IPTY +
Sbjct: 90 VVRHFLACVSQPAVGAETIVEIDIAGESFSSSGRVIIAKNYLDVYRFESWGGSMIPTYVF 149
Query: 416 EQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKKLLDRCYATKDSN 595
QQF PT LTLDSGVTRPPPLLSEADLL+CMDKA IGTDATMHDHIKKLLDR YATKDSN
Sbjct: 150 GQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDSN 209
Query: 596 MRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDEVLATCLQQMKAC 775
RFSPT LGEALVMGYD+MG+ELWKP LR+ ME DM AVS G KR++EVL TCL+QMKAC
Sbjct: 210 TRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQMKAC 269
Query: 776 FLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDMVLRKKPDGNFMV 955
FLDARLNKVKL EAM +FFERSNRS+G EQH +G+VVR+C LCQESDMVLR+KPDGNFMV
Sbjct: 270 FLDARLNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRRKPDGNFMV 329
Query: 956 GCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEIPPDYNVNHLGCI 1135
GCLGYPQCRNVVWLPGS+SEA +TT C+ C+PGPVY IQFKFRRLEIPP+YN++HLGC+
Sbjct: 330 GCLGYPQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDHLGCV 389
Query: 1136 GGCDDTLRQLVEICG 1180
GCD+ LRQL EICG
Sbjct: 390 CGCDEILRQLTEICG 404
>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
Length = 914
Score = 664 bits (1713), Expect = 0.0
Identities = 310/375 (82%), Positives = 341/375 (90%)
Frame = +2
Query: 56 QQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHHKVYEL 235
Q GHP+WG+YAQRLLDP A LWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDH ++YEL
Sbjct: 355 QLGHPIWGSYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHQRLYEL 414
Query: 236 VVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSVIPTYQY 415
VVRHFLACVSQPA+GAET VEIDIAGE FS+SGRVIIAKNYLDVYRFE+WGGS+IPTY +
Sbjct: 415 VVRHFLACVSQPAVGAETIVEIDIAGESFSSSGRVIIAKNYLDVYRFESWGGSMIPTYVF 474
Query: 416 EQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKKLLDRCYATKDSN 595
QQF PT LTLDSGVTRPPPLLSEADLL+CMDKA IGTDATMHDHIKKLLDR YATKDSN
Sbjct: 475 GQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDSN 534
Query: 596 MRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDEVLATCLQQMKAC 775
RFSPT LGEALVMGYD+MG+ELWKP LR+ ME DM AVS G KR++EVL TCL+QMKAC
Sbjct: 535 TRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQMKAC 594
Query: 776 FLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDMVLRKKPDGNFMV 955
FLDARLNKVKL EAM +FFERSNRS+G EQH +G+VVR+C LCQESDMVLR+KPDGNFMV
Sbjct: 595 FLDARLNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRRKPDGNFMV 654
Query: 956 GCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEIPPDYNVNHLGCI 1135
GCLGYPQCRNVVWLPGS+SEA +TT C+ C+PGPVY IQFKFRRLEIPP+YN++HLGC+
Sbjct: 655 GCLGYPQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDHLGCV 714
Query: 1136 GGCDDTLRQLVEICG 1180
GCD+ LRQL EICG
Sbjct: 715 CGCDEILRQLTEICG 729
>ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum lycopersicum]
Length = 910
Score = 662 bits (1708), Expect = 0.0
Identities = 314/381 (82%), Positives = 336/381 (88%)
Frame = +2
Query: 38 KTCLRIQQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDH 217
+T ++ Q+GHPVWG YAQRLLDP++ LWRNPS GGHDDKAHPPIHPTKFSAGE+ WSQDH
Sbjct: 359 RTMVQEQEGHPVWGTYAQRLLDPQSGLWRNPSGGGHDDKAHPPIHPTKFSAGETRWSQDH 418
Query: 218 HKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSV 397
H+VYELVVRHFLACVSQPA+GAET VEIDIAGE FSA GRVI+AKNYLDVYRFE+WGGSV
Sbjct: 419 HRVYELVVRHFLACVSQPAVGAETIVEIDIAGESFSACGRVILAKNYLDVYRFESWGGSV 478
Query: 398 IPTYQYEQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKKLLDRCY 577
IPTY + QQFTPT LTLDSGV RPPPLLSEADLL CMDKA IGTDATMHDHIKKLLDR Y
Sbjct: 479 IPTYSFGQQFTPTTLTLDSGVIRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFY 538
Query: 578 ATKDSNMRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDEVLATCL 757
A KDSN RFSPTKLGEALVMGYD+MG+ELWKP LRA ME DM AVS G KRK EVL TCL
Sbjct: 539 AIKDSNTRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSTGTKRKAEVLETCL 598
Query: 758 QQMKACFLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDMVLRKKP 937
QQMKACF DAR NK KL EAM +FFERSNRS+ EQ +G VVR+CGLC ESDMVLR+KP
Sbjct: 599 QQMKACFSDARTNKEKLLEAMAIFFERSNRSSSGEQQAVGAVVRRCGLCLESDMVLRQKP 658
Query: 938 DGNFMVGCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEIPPDYNV 1117
DGNFMVGCLGYPQCRNVVWLPGSVSEA VT N C TCSPGPV+ IQFKFR+ EIPPDY+V
Sbjct: 659 DGNFMVGCLGYPQCRNVVWLPGSVSEASVTENTCITCSPGPVFKIQFKFRQQEIPPDYSV 718
Query: 1118 NHLGCIGGCDDTLRQLVEICG 1180
HLGCIGGCDD LRQLVEICG
Sbjct: 719 QHLGCIGGCDDILRQLVEICG 739
>ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [Fragaria vesca subsp.
vesca]
Length = 908
Score = 657 bits (1695), Expect = 0.0
Identities = 310/387 (80%), Positives = 340/387 (87%), Gaps = 4/387 (1%)
Frame = +2
Query: 32 SPKTCLRI----QQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGES 199
SP+T L QQGHP WG+YAQRLLDP + LWRNPS+GGHDDKAHPPIHPTKFSAGES
Sbjct: 344 SPRTDLHAIVQEQQGHPGWGSYAQRLLDPASGLWRNPSSGGHDDKAHPPIHPTKFSAGES 403
Query: 200 GWSQDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFE 379
WSQDH+++YELVVRHFLACVSQPA+GAETTVEIDIAGE FSASGRVI+AKNYLDVYRFE
Sbjct: 404 NWSQDHNRLYELVVRHFLACVSQPAVGAETTVEIDIAGEMFSASGRVILAKNYLDVYRFE 463
Query: 380 TWGGSVIPTYQYEQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKK 559
+WGGS++PTY QQF PT LTLDSGVTRPPPLLSEADLL CMDK IGTDATMHDHIKK
Sbjct: 464 SWGGSLLPTYAVGQQFMPTTLTLDSGVTRPPPLLSEADLLGCMDKEGIGTDATMHDHIKK 523
Query: 560 LLDRCYATKDSNMRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDE 739
LLDR YATKD+N RFSPT LGEALVMGYD+MG++LWKP LRA ME DM AVSEG K K E
Sbjct: 524 LLDRFYATKDANTRFSPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKAVSEGNKSKAE 583
Query: 740 VLATCLQQMKACFLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDM 919
VL TCLQQMK CFLDAR NKVKLFEAM VFFERSNR G +QHT GE +R+CGLCQE+DM
Sbjct: 584 VLETCLQQMKGCFLDARQNKVKLFEAMAVFFERSNRPGGDDQHTSGEFIRRCGLCQEADM 643
Query: 920 VLRKKPDGNFMVGCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEI 1099
VLRK DGNFMVGC+GYPQCRN +WLPGSVSEAV TTNIC++C+PGPV++IQF FRRLEI
Sbjct: 644 VLRKNRDGNFMVGCMGYPQCRNAIWLPGSVSEAVATTNICNSCTPGPVHLIQFTFRRLEI 703
Query: 1100 PPDYNVNHLGCIGGCDDTLRQLVEICG 1180
PP+Y+ NHLGCIGGCD+ LRQL EICG
Sbjct: 704 PPNYSTNHLGCIGGCDEILRQLTEICG 730
>gb|EXB95897.1| DNA topoisomerase 3-alpha [Morus notabilis]
Length = 1580
Score = 657 bits (1694), Expect = 0.0
Identities = 307/381 (80%), Positives = 337/381 (88%)
Frame = +2
Query: 38 KTCLRIQQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDH 217
K + QQGHP+WG+YAQRLLDP + LWRNP NGGHDDKAHPPIHPTKFSAGE WSQDH
Sbjct: 329 KAIVEEQQGHPIWGSYAQRLLDPGSGLWRNPGNGGHDDKAHPPIHPTKFSAGEPAWSQDH 388
Query: 218 HKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSV 397
++YELVVRHFLACVSQPA+GAETTVEIDIAGE FSASGRV++AKNYLD+YRFE+WGGS+
Sbjct: 389 LRLYELVVRHFLACVSQPAVGAETTVEIDIAGELFSASGRVVLAKNYLDIYRFESWGGSL 448
Query: 398 IPTYQYEQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKKLLDRCY 577
IPTY QQF PT LTLDSGVTRPPPLLSEADLLSCMDK IGTDATMHDHIKKLLDRCY
Sbjct: 449 IPTYVLGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRCY 508
Query: 578 ATKDSNMRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDEVLATCL 757
ATKD+N RFSPT LGEALVMGYD+MG++LWKP LRA ME DM AVSEG K K E+L TCL
Sbjct: 509 ATKDANTRFSPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKAVSEGAKSKAELLETCL 568
Query: 758 QQMKACFLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDMVLRKKP 937
QQMKACFLDARLNK KL E M +FFERSNRS+G EQH EVVR CGLC ESDMVL++
Sbjct: 569 QQMKACFLDARLNKAKLLETMAIFFERSNRSSGDEQHGPVEVVRPCGLCHESDMVLKQNR 628
Query: 938 DGNFMVGCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEIPPDYNV 1117
DGNFMVGC+GYPQCRNVVWLPGSVSEA VT+NIC++C+PGPV++IQFKFRRLEIPPDYN
Sbjct: 629 DGNFMVGCMGYPQCRNVVWLPGSVSEAAVTSNICNSCTPGPVHLIQFKFRRLEIPPDYNA 688
Query: 1118 NHLGCIGGCDDTLRQLVEICG 1180
+HLGCIGGCD LRQL+EICG
Sbjct: 689 SHLGCIGGCDAILRQLIEICG 709
>ref|XP_007048481.1| Topoisomerase 3alpha isoform 2, partial [Theobroma cacao]
gi|508700742|gb|EOX92638.1| Topoisomerase 3alpha isoform
2, partial [Theobroma cacao]
Length = 845
Score = 653 bits (1684), Expect = 0.0
Identities = 305/375 (81%), Positives = 333/375 (88%)
Frame = +2
Query: 56 QQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHHKVYEL 235
QQ HP WG+YAQRLLDP LWRNPS+GGHDDKAHPPIHPTKFSAGE WSQDH K+YEL
Sbjct: 359 QQDHPEWGSYAQRLLDPGTSLWRNPSSGGHDDKAHPPIHPTKFSAGEHNWSQDHRKLYEL 418
Query: 236 VVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSVIPTYQY 415
VVRHFLACVSQPA+GAETTVEIDIA EQFS SGRVI+ +NYLDVYR+E+WGGS+IPTY
Sbjct: 419 VVRHFLACVSQPAVGAETTVEIDIADEQFSTSGRVILERNYLDVYRYESWGGSMIPTYTL 478
Query: 416 EQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKKLLDRCYATKDSN 595
QQF PT+LTLD+GVTRPPPLLSEADLLSCMDKA IGTDATMHDHIKKLLDR YATKDSN
Sbjct: 479 GQQFIPTSLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSN 538
Query: 596 MRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDEVLATCLQQMKAC 775
RFSPTKLGEALVMGYD+MG+ELWKP LR+ ME DM VS G KRKDEVLATCLQQMKAC
Sbjct: 539 TRFSPTKLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQMKAC 598
Query: 776 FLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDMVLRKKPDGNFMV 955
FLDARLNKVKL EAM VFFERSN+S G + H GEVVR+CGLC+ES MVL+K DGNFMV
Sbjct: 599 FLDARLNKVKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDGNFMV 658
Query: 956 GCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEIPPDYNVNHLGCI 1135
GCLG+PQCRN +WLPGSV EA VT+NIC +C+PGPVY+IQFKFR+LEIPP +N NHLGCI
Sbjct: 659 GCLGFPQCRNAIWLPGSVLEAAVTSNICGSCNPGPVYLIQFKFRQLEIPPGFNANHLGCI 718
Query: 1136 GGCDDTLRQLVEICG 1180
GGCDD LRQL+EICG
Sbjct: 719 GGCDDILRQLIEICG 733
>ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
gi|508700741|gb|EOX92637.1| Topoisomerase 3alpha isoform
1 [Theobroma cacao]
Length = 914
Score = 653 bits (1684), Expect = 0.0
Identities = 305/375 (81%), Positives = 333/375 (88%)
Frame = +2
Query: 56 QQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHHKVYEL 235
QQ HP WG+YAQRLLDP LWRNPS+GGHDDKAHPPIHPTKFSAGE WSQDH K+YEL
Sbjct: 359 QQDHPEWGSYAQRLLDPGTSLWRNPSSGGHDDKAHPPIHPTKFSAGEHNWSQDHRKLYEL 418
Query: 236 VVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSVIPTYQY 415
VVRHFLACVSQPA+GAETTVEIDIA EQFS SGRVI+ +NYLDVYR+E+WGGS+IPTY
Sbjct: 419 VVRHFLACVSQPAVGAETTVEIDIADEQFSTSGRVILERNYLDVYRYESWGGSMIPTYTL 478
Query: 416 EQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKKLLDRCYATKDSN 595
QQF PT+LTLD+GVTRPPPLLSEADLLSCMDKA IGTDATMHDHIKKLLDR YATKDSN
Sbjct: 479 GQQFIPTSLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSN 538
Query: 596 MRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDEVLATCLQQMKAC 775
RFSPTKLGEALVMGYD+MG+ELWKP LR+ ME DM VS G KRKDEVLATCLQQMKAC
Sbjct: 539 TRFSPTKLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQMKAC 598
Query: 776 FLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDMVLRKKPDGNFMV 955
FLDARLNKVKL EAM VFFERSN+S G + H GEVVR+CGLC+ES MVL+K DGNFMV
Sbjct: 599 FLDARLNKVKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDGNFMV 658
Query: 956 GCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEIPPDYNVNHLGCI 1135
GCLG+PQCRN +WLPGSV EA VT+NIC +C+PGPVY+IQFKFR+LEIPP +N NHLGCI
Sbjct: 659 GCLGFPQCRNAIWLPGSVLEAAVTSNICGSCNPGPVYLIQFKFRQLEIPPGFNANHLGCI 718
Query: 1136 GGCDDTLRQLVEICG 1180
GGCDD LRQL+EICG
Sbjct: 719 GGCDDILRQLIEICG 733
>ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cicer arietinum]
Length = 920
Score = 651 bits (1680), Expect = 0.0
Identities = 308/375 (82%), Positives = 334/375 (89%)
Frame = +2
Query: 56 QQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHHKVYEL 235
QQGHP WG YAQRLLDPEA LWRNP GGHDDKAHPPIHPTKFSAGESGWSQDH K+YEL
Sbjct: 360 QQGHPQWGVYAQRLLDPEAGLWRNPRGGGHDDKAHPPIHPTKFSAGESGWSQDHRKLYEL 419
Query: 236 VVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSVIPTYQY 415
VVRHFLACVS+PA+GAETTVEIDIAGE FSA GRVI+ KNYLDVY++E+WGGS+IPTY
Sbjct: 420 VVRHFLACVSKPAVGAETTVEIDIAGELFSACGRVILEKNYLDVYQYESWGGSIIPTYTI 479
Query: 416 EQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKKLLDRCYATKDSN 595
QQF PT LTLDSGVTRPPP LSEADLLSCMDK IGTDATMHDHIKKLLDR YATKD++
Sbjct: 480 GQQFIPTTLTLDSGVTRPPPPLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDAS 539
Query: 596 MRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDEVLATCLQQMKAC 775
MRF+PT LGEALVMGYD+MG++LWKP LRA ME DM +VSEG K K EVL T LQQMKAC
Sbjct: 540 MRFTPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKSVSEGTKSKTEVLDTSLQQMKAC 599
Query: 776 FLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDMVLRKKPDGNFMV 955
FLDARLNKVKL EAMG+FFERSNRS G EQ+ IGEVVR+CGLC+ESDMVL+K DGNFMV
Sbjct: 600 FLDARLNKVKLLEAMGIFFERSNRSGGEEQNAIGEVVRRCGLCRESDMVLKKSRDGNFMV 659
Query: 956 GCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEIPPDYNVNHLGCI 1135
GCLG+PQCRN VWLPGSVSEAVVTTN CS C+PGPVY IQFKFR+LEIPP+Y+VNHLGCI
Sbjct: 660 GCLGFPQCRNAVWLPGSVSEAVVTTNTCSNCTPGPVYRIQFKFRQLEIPPNYDVNHLGCI 719
Query: 1136 GGCDDTLRQLVEICG 1180
GGCD+ L QL EICG
Sbjct: 720 GGCDEILTQLTEICG 734
>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
gi|223533243|gb|EEF34998.1| prokaryotic DNA
topoisomerase, putative [Ricinus communis]
Length = 833
Score = 649 bits (1674), Expect = 0.0
Identities = 300/386 (77%), Positives = 340/386 (88%)
Frame = +2
Query: 23 TRISPKTCLRIQQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGESG 202
+R T +R QQ HP+WG+YAQRLLDP LWRNPS GGHDDKAHPPIHPTKFS GE+G
Sbjct: 347 SRTDLHTIVRDQQAHPIWGSYAQRLLDPGTGLWRNPSTGGHDDKAHPPIHPTKFSPGETG 406
Query: 203 WSQDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFET 382
WSQDHH+VYELVVRHFLACVSQPA+GAETTVEIDIAGEQFSASGRVI+AKNYLDVYRFE+
Sbjct: 407 WSQDHHRVYELVVRHFLACVSQPAVGAETTVEIDIAGEQFSASGRVILAKNYLDVYRFES 466
Query: 383 WGGSVIPTYQYEQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKKL 562
WGGS+IPTY + QQF PT LTLDSGVTRPPPLLSE+DLLSCMDKA IGTDATMHDHIKKL
Sbjct: 467 WGGSMIPTYVHGQQFMPTTLTLDSGVTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKL 526
Query: 563 LDRCYATKDSNMRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDEV 742
LDR YATKD+N RFSPT LGEALVMGYD+MG+ELWKP LR+ ME DM VS G K K EV
Sbjct: 527 LDRFYATKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRSMMEYDMKEVSMGHKSKAEV 586
Query: 743 LATCLQQMKACFLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDMV 922
L TCLQQMK CFLDAR+NKVKL EAM VFFERS+RS+G++ H ++VR+CGLC+E++MV
Sbjct: 587 LETCLQQMKTCFLDARINKVKLLEAMAVFFERSDRSSGNDNHATVDIVRQCGLCRETNMV 646
Query: 923 LRKKPDGNFMVGCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEIP 1102
LR+ DGNFMVGC+GYPQCRN +WLPG + EA VTT++C+ C+PGPVY+IQFKFR+LEIP
Sbjct: 647 LRRNRDGNFMVGCMGYPQCRNAIWLPGPIIEATVTTSVCNYCTPGPVYLIQFKFRQLEIP 706
Query: 1103 PDYNVNHLGCIGGCDDTLRQLVEICG 1180
P ++VNHLGCIGGCDDTLRQL +ICG
Sbjct: 707 PGFSVNHLGCIGGCDDTLRQLTDICG 732
>ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Populus trichocarpa]
gi|222856496|gb|EEE94043.1| hypothetical protein
POPTR_0005s06810g [Populus trichocarpa]
Length = 910
Score = 639 bits (1649), Expect = 0.0
Identities = 300/386 (77%), Positives = 334/386 (86%)
Frame = +2
Query: 23 TRISPKTCLRIQQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGESG 202
+R T ++ Q HPVWG+YAQRLLDP A LWRNPSNGGHDDKAHPPIHPTKFSAGES
Sbjct: 345 SRTDLHTIVQEHQEHPVWGSYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESR 404
Query: 203 WSQDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFET 382
WSQDHH++YELVVRHFLACVSQPA+GAET VEIDIAGE+FSASGRVI+AKNYLDVYRFE+
Sbjct: 405 WSQDHHRLYELVVRHFLACVSQPAVGAETVVEIDIAGERFSASGRVILAKNYLDVYRFES 464
Query: 383 WGGSVIPTYQYEQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKKL 562
WG S+IPTY QQF P LTLDSGVTRPPPLLSEADLLSCMDKA IGTDATMHDHIKKL
Sbjct: 465 WGDSMIPTYLQGQQFIPATLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKL 524
Query: 563 LDRCYATKDSNMRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDEV 742
LDR Y TKD+N RFSPT LGEALVMGYD+MG+ELWKP LR+ ME DM VS G K K EV
Sbjct: 525 LDRFYVTKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRSLMECDMKEVSVGNKSKAEV 584
Query: 743 LATCLQQMKACFLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDMV 922
LATCLQQMKACFLDA++NKVKL EAM +FF RS+RS G + +GE VR CGLCQE++MV
Sbjct: 585 LATCLQQMKACFLDAKVNKVKLLEAMAIFFNRSDRSNGDDSSALGENVRPCGLCQEANMV 644
Query: 923 LRKKPDGNFMVGCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEIP 1102
L+K DGNFMVGC G+PQCRN VWLPG V EA +T NIC++C+PGPVY+IQFKFR+LEIP
Sbjct: 645 LKKNRDGNFMVGCSGFPQCRNAVWLPGPVLEATITNNICNSCTPGPVYLIQFKFRQLEIP 704
Query: 1103 PDYNVNHLGCIGGCDDTLRQLVEICG 1180
P +NVNHLGCIGGCD+TLRQL+EICG
Sbjct: 705 PGFNVNHLGCIGGCDETLRQLIEICG 730
>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
Length = 925
Score = 633 bits (1632), Expect = e-179
Identities = 298/379 (78%), Positives = 330/379 (87%), Gaps = 1/379 (0%)
Frame = +2
Query: 47 LRIQQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHHKV 226
+R QQ H +WGAYAQRLLDPE+RLWRNPS GGHDDKAHPPIHPTKFSAGE GWSQDHH++
Sbjct: 358 VREQQEHQIWGAYAQRLLDPESRLWRNPSGGGHDDKAHPPIHPTKFSAGERGWSQDHHRL 417
Query: 227 YELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRV-IIAKNYLDVYRFETWGGSVIP 403
YELVVRHFLACVSQPA+GA TTVEIDIAGE FS S R I +NYLDVYRFE+WGGS IP
Sbjct: 418 YELVVRHFLACVSQPAVGAVTTVEIDIAGELFSTSKRANSILRNYLDVYRFESWGGSTIP 477
Query: 404 TYQYEQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKKLLDRCYAT 583
TY QQF PT LTLDSGVTRPPPLLSEADLLSCMDK IGTDATMHDHIKKLLDR YAT
Sbjct: 478 TYVSGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYAT 537
Query: 584 KDSNMRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDEVLATCLQQ 763
KD+N RF+PT LGEALVMGYD+MG+ LWKP LRA ME +M AVSEG KRKDEVLA+CLQQ
Sbjct: 538 KDANTRFTPTNLGEALVMGYDDMGYNLWKPNLRAIMEHEMKAVSEGTKRKDEVLASCLQQ 597
Query: 764 MKACFLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDMVLRKKPDG 943
MK CFLDAR+NK KL EAM VFFERSN S G E +GEVV+ CGLCQ+SDMVL++ DG
Sbjct: 598 MKTCFLDARVNKQKLLEAMEVFFERSNGSGGDENRAVGEVVQLCGLCQDSDMVLKRNRDG 657
Query: 944 NFMVGCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEIPPDYNVNH 1123
N+MVGCLG+PQCRNVVWLPGS++EA VT++ C+ C+PGPVY+IQFKFR+LEIPP+YN NH
Sbjct: 658 NYMVGCLGFPQCRNVVWLPGSIAEATVTSDRCTLCTPGPVYLIQFKFRQLEIPPNYNANH 717
Query: 1124 LGCIGGCDDTLRQLVEICG 1180
LGC+GGCDD LRQL EICG
Sbjct: 718 LGCVGGCDDILRQLTEICG 736
>ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [Citrus sinensis]
Length = 940
Score = 623 bits (1607), Expect = e-176
Identities = 295/375 (78%), Positives = 326/375 (86%)
Frame = +2
Query: 56 QQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHHKVYEL 235
Q GHP WG YAQRLLD A LWRNP +GGHDDKAHPPIHPTKFS+GES WSQDH+K+YEL
Sbjct: 391 QIGHPDWGPYAQRLLDHAAGLWRNPGSGGHDDKAHPPIHPTKFSSGESRWSQDHYKLYEL 450
Query: 236 VVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSVIPTYQY 415
VVRHFLACVSQPA+GAET VEI+IAGE FS SGRVI+AKNYLDVYRFE+WGG VIPTY +
Sbjct: 451 VVRHFLACVSQPAVGAETIVEINIAGEVFSTSGRVILAKNYLDVYRFESWGGLVIPTYVH 510
Query: 416 EQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKKLLDRCYATKDSN 595
QQF PT LTLDSGVTRPPPLLSEADLLSCMDKA IGTDATMHDHIKKLLDR YA KD+N
Sbjct: 511 GQQFIPTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAIKDAN 570
Query: 596 MRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDEVLATCLQQMKAC 775
RF+PT +GEALVMGYD+MG+ELWKP LR+ MESDM VS G K K +VLA CLQQMKAC
Sbjct: 571 TRFAPTNIGEALVMGYDDMGYELWKPNLRSMMESDMKEVSVGNKSKADVLANCLQQMKAC 630
Query: 776 FLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDMVLRKKPDGNFMV 955
FLDARL KVKL EAMG+FFERS G +Q GEVVR+CG+CQES+MVL+K DGN MV
Sbjct: 631 FLDARLKKVKLLEAMGIFFERSG---GEDQQAAGEVVRQCGICQESNMVLKKSRDGNLMV 687
Query: 956 GCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEIPPDYNVNHLGCI 1135
GCL +PQCRN VWLPGSVSEA VTTN C++C+PGPVY+IQFKFR+ EIPP +NVNHLGCI
Sbjct: 688 GCLAFPQCRNAVWLPGSVSEAAVTTNTCNSCTPGPVYLIQFKFRQHEIPPGFNVNHLGCI 747
Query: 1136 GGCDDTLRQLVEICG 1180
GGCD+TLRQL+EICG
Sbjct: 748 GGCDETLRQLIEICG 762
>ref|XP_006432122.1| hypothetical protein CICLE_v10003112mg, partial [Citrus clementina]
gi|557534244|gb|ESR45362.1| hypothetical protein
CICLE_v10003112mg, partial [Citrus clementina]
Length = 794
Score = 622 bits (1603), Expect = e-175
Identities = 295/375 (78%), Positives = 326/375 (86%)
Frame = +2
Query: 56 QQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHHKVYEL 235
Q GHP WG YAQRLLD A LWRNP +GGHDDKAHPPIHPTKFS+GES WSQDH+K+YEL
Sbjct: 361 QIGHPDWGPYAQRLLDHAAGLWRNPGSGGHDDKAHPPIHPTKFSSGESRWSQDHYKLYEL 420
Query: 236 VVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSVIPTYQY 415
VVRHFLACVSQPA+GAET VEI+IAGE FS SGRVI+AKNYLDVYRFE+WGG VIPTY +
Sbjct: 421 VVRHFLACVSQPAVGAETIVEINIAGEVFSTSGRVILAKNYLDVYRFESWGGLVIPTYVH 480
Query: 416 EQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKKLLDRCYATKDSN 595
QQF PT LTLDSGVTRPPPLLSEADLLSCMDKA IGTDATMHDHIKKLLDR YA KD+N
Sbjct: 481 GQQFIPTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAIKDAN 540
Query: 596 MRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDEVLATCLQQMKAC 775
RF+PT +GEALVMGYD+MG+ELWKP LR+ MESDM VS G K K +VLA CLQQMKAC
Sbjct: 541 TRFAPTNIGEALVMGYDDMGYELWKPNLRSMMESDMKEVSVGNKSKADVLANCLQQMKAC 600
Query: 776 FLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDMVLRKKPDGNFMV 955
FLDARL KVKL EAMG+FFER S G +Q GEVVR+CG+CQES+MVL+K DGN MV
Sbjct: 601 FLDARLKKVKLLEAMGIFFER--WSGGEDQQAAGEVVRQCGICQESNMVLKKSRDGNLMV 658
Query: 956 GCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEIPPDYNVNHLGCI 1135
GCL +PQCRN VWLPGSVSEA VTTN C++C+PGPVY+IQFKFR+ EIPP +NVNHLGCI
Sbjct: 659 GCLAFPQCRNAVWLPGSVSEAAVTTNTCNSCTPGPVYLIQFKFRQHEIPPGFNVNHLGCI 718
Query: 1136 GGCDDTLRQLVEICG 1180
GGCD+TLRQL+EICG
Sbjct: 719 GGCDETLRQLIEICG 733
>ref|XP_003558748.1| PREDICTED: DNA topoisomerase 3-alpha [Brachypodium distachyon]
Length = 924
Score = 617 bits (1590), Expect = e-174
Identities = 293/385 (76%), Positives = 329/385 (85%), Gaps = 4/385 (1%)
Frame = +2
Query: 32 SPKTCLRI----QQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGES 199
SP T L Q HPVWG+YAQRLL+PE RLWRNPSNGGHDDKAHPPIHPTKF+AGES
Sbjct: 352 SPNTDLHAIAHEQVPHPVWGSYAQRLLNPEERLWRNPSNGGHDDKAHPPIHPTKFTAGES 411
Query: 200 GWSQDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFE 379
WSQDHHKVYELVVRHFLAC SQPA+GAETTVEIDIAGEQF+ASGRV++AKNYLDVYR++
Sbjct: 412 NWSQDHHKVYELVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVVLAKNYLDVYRYD 471
Query: 380 TWGGSVIPTYQYEQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKK 559
+WGGS++PTY QQF PT LTLDSGVTRPPPLL+EADLLSCMDKA IGTDATMH+HIKK
Sbjct: 472 SWGGSLLPTYTIGQQFVPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHEHIKK 531
Query: 560 LLDRCYATKDSNMRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDE 739
LLDRCYATKD+N RFSPT LGEALVMGYDEMG+ELWKP LRA ME+DM AVS G K K E
Sbjct: 532 LLDRCYATKDANSRFSPTNLGEALVMGYDEMGYELWKPYLRAMMEADMKAVSIGTKSKLE 591
Query: 740 VLATCLQQMKACFLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDM 919
VL CLQQMKACFLDAR NKVKL +AMG FF RSNR Q+ + EVVR CG C +S+M
Sbjct: 592 VLEGCLQQMKACFLDARSNKVKLLDAMGTFFARSNRPLNETQNPM-EVVRPCGACNDSEM 650
Query: 920 VLRKKPDGNFMVGCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEI 1099
+L++KP+G FMVGC +PQCRNVVWLPGS+SEA VT IC TC PGPVY IQFKF R +I
Sbjct: 651 LLKRKPNGGFMVGCRSFPQCRNVVWLPGSLSEAAVTEQICPTCVPGPVYKIQFKFNRRDI 710
Query: 1100 PPDYNVNHLGCIGGCDDTLRQLVEI 1174
PP+++V+HLGCIGGCDD L++L+EI
Sbjct: 711 PPNFDVDHLGCIGGCDDVLKELIEI 735
>ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [Oryza brachyantha]
Length = 923
Score = 613 bits (1581), Expect = e-173
Identities = 286/373 (76%), Positives = 323/373 (86%)
Frame = +2
Query: 56 QQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHHKVYEL 235
Q HPVWG YAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGE+ WS +H K+YEL
Sbjct: 365 QTAHPVWGTYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGETNWSDNHKKLYEL 424
Query: 236 VVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSVIPTYQY 415
VVRHFLAC SQPA+GAETTVEIDIAGEQF+ASGRV+++KNYLDVYRF++WGG+++PTY
Sbjct: 425 VVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVVLSKNYLDVYRFDSWGGTLLPTYTI 484
Query: 416 EQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKKLLDRCYATKDSN 595
QQF PT LTLDSGVTRPPPLL+EADLLSCMDKA IGTDATMHDHIKKLLDRCYATKD+N
Sbjct: 485 GQQFIPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHDHIKKLLDRCYATKDAN 544
Query: 596 MRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDEVLATCLQQMKAC 775
RFSPT LGEALVMGYDEMG+ELWKP LR+ ME+DM +VS G K K EVL CLQQMKAC
Sbjct: 545 TRFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSIGTKSKAEVLENCLQQMKAC 604
Query: 776 FLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDMVLRKKPDGNFMV 955
FLDAR NKVKLF+AMG FF RS+R Q++I E VR C C ES+MVL+++P G FMV
Sbjct: 605 FLDARANKVKLFDAMGAFFARSSRPINETQNSI-EAVRPCAACNESEMVLKRRPTGEFMV 663
Query: 956 GCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEIPPDYNVNHLGCI 1135
GC G+PQCRNVVWLPGS+SEA VT +C TC+PGPVY IQFKFRR +IPP ++V+HLGCI
Sbjct: 664 GCRGFPQCRNVVWLPGSLSEASVTDQVCPTCAPGPVYKIQFKFRRRDIPPSFDVDHLGCI 723
Query: 1136 GGCDDTLRQLVEI 1174
GGCDD L++L EI
Sbjct: 724 GGCDDILKELTEI 736
>ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana]
gi|8777305|dbj|BAA96895.1| DNA topoisomerase III
[Arabidopsis thaliana] gi|169218912|gb|ACA50279.1|
topoisomerase 3 alpha [Arabidopsis thaliana]
gi|332010433|gb|AED97816.1| topoisomerase 3alpha
[Arabidopsis thaliana]
Length = 926
Score = 613 bits (1580), Expect = e-173
Identities = 287/386 (74%), Positives = 321/386 (83%)
Frame = +2
Query: 23 TRISPKTCLRIQQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGESG 202
+R + + Q HP WG+YAQRLL+PE LWRNP+NGGHDDKAHPPIHPTKFS+GES
Sbjct: 352 SRTDLRAMVEEQTRHPAWGSYAQRLLEPEGGLWRNPANGGHDDKAHPPIHPTKFSSGESN 411
Query: 203 WSQDHHKVYELVVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFET 382
WS+DH VYELVVRH+LACVSQPA+ AETTVEIDIAGE+FSASGR I+AKNYL+VYRFE+
Sbjct: 412 WSRDHLNVYELVVRHYLACVSQPAVAAETTVEIDIAGERFSASGRAILAKNYLEVYRFES 471
Query: 383 WGGSVIPTYQYEQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKKL 562
WGGSVIP Y+ QQF PT LTLD+ VTRPPPLL EADLLSCMDKA IGTDATMHDHIKKL
Sbjct: 472 WGGSVIPVYEKGQQFIPTTLTLDAAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKL 531
Query: 563 LDRCYATKDSNMRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDEV 742
LDR YATKD+N RFSPT LGEALVMGYD+MG+ELWKP LRA ME DM VS GRK K EV
Sbjct: 532 LDRGYATKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRALMEHDMNEVSVGRKTKAEV 591
Query: 743 LATCLQQMKACFLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDMV 922
L TCLQQMKACFLDAR+ K KL EAM +FFERSN + SE T GEVVR+C LC ESDM
Sbjct: 592 LETCLQQMKACFLDARVKKSKLLEAMTIFFERSNNTDESESQTAGEVVRRCNLCNESDMA 651
Query: 923 LRKKPDGNFMVGCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEIP 1102
LRK DGNFMVGC+ YPQCRN VWLPG EA VTTN+C +C PGPVY I FKFR++ IP
Sbjct: 652 LRKNRDGNFMVGCMNYPQCRNAVWLPGPTLEASVTTNVCQSCGPGPVYKILFKFRQIGIP 711
Query: 1103 PDYNVNHLGCIGGCDDTLRQLVEICG 1180
P ++VNHLGC+GGCDD L+QL++ICG
Sbjct: 712 PGFDVNHLGCVGGCDDILKQLIDICG 737
>ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arabidopsis lyrata subsp.
lyrata] gi|297310711|gb|EFH41135.1| hypothetical protein
ARALYDRAFT_496584 [Arabidopsis lyrata subsp. lyrata]
Length = 923
Score = 611 bits (1576), Expect = e-172
Identities = 287/375 (76%), Positives = 316/375 (84%)
Frame = +2
Query: 56 QQGHPVWGAYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHHKVYEL 235
Q+ HP WG+YAQRLL+PE LWRNP NGGHDDKAHPPIHPTKFS+GES WS+DH VYEL
Sbjct: 363 QRRHPAWGSYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPTKFSSGESNWSRDHLNVYEL 422
Query: 236 VVRHFLACVSQPAIGAETTVEIDIAGEQFSASGRVIIAKNYLDVYRFETWGGSVIPTYQY 415
VVRH+LACVSQPA AETTVEIDIAGE+FSASGR I+AKNYL+VYRFE+WGGSVIP Y+
Sbjct: 423 VVRHYLACVSQPAKAAETTVEIDIAGERFSASGRAILAKNYLEVYRFESWGGSVIPVYEK 482
Query: 416 EQQFTPTALTLDSGVTRPPPLLSEADLLSCMDKAQIGTDATMHDHIKKLLDRCYATKDSN 595
QQF PT LTLDS VTRPPPLL EADLLSCMDKA IGTDATMHDHIKKLLDR YATKD+N
Sbjct: 483 GQQFIPTTLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDAN 542
Query: 596 MRFSPTKLGEALVMGYDEMGHELWKPRLRAEMESDMTAVSEGRKRKDEVLATCLQQMKAC 775
RFSPT LGEALVMGYD+MG+ELWKP LRA ME DM VS GRK K EVL TCLQQMKAC
Sbjct: 543 TRFSPTNLGEALVMGYDDMGYELWKPNLRALMERDMNEVSVGRKTKAEVLETCLQQMKAC 602
Query: 776 FLDARLNKVKLFEAMGVFFERSNRSTGSEQHTIGEVVRKCGLCQESDMVLRKKPDGNFMV 955
FLDAR+ K KL EAM +FFERSN + SE T GEV+R+C LC ESDM LRK DGNFMV
Sbjct: 603 FLDARVKKSKLLEAMTIFFERSNNTDESESQTAGEVIRRCNLCNESDMALRKNRDGNFMV 662
Query: 956 GCLGYPQCRNVVWLPGSVSEAVVTTNICSTCSPGPVYMIQFKFRRLEIPPDYNVNHLGCI 1135
GC+ YPQCRN VWLPG EA VTT++C TC PGPVY I FKFR++ IPP ++VNHLGCI
Sbjct: 663 GCMNYPQCRNAVWLPGPTLEASVTTDVCQTCGPGPVYKILFKFRQIGIPPGFDVNHLGCI 722
Query: 1136 GGCDDTLRQLVEICG 1180
GGCDD L+QL++ICG
Sbjct: 723 GGCDDILKQLIDICG 737