BLASTX nr result
ID: Mentha25_contig00006886
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00006886
(616 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU42543.1| hypothetical protein MIMGU_mgv1a000463mg [Mimulus... 291 1e-76
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico... 270 2e-70
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 266 4e-69
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 263 2e-68
gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlise... 252 7e-65
gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis] 246 4e-63
ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 244 1e-62
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V... 243 3e-62
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis... 240 3e-61
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu... 240 3e-61
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun... 239 4e-61
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici... 238 8e-61
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum] 238 1e-60
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum] 238 1e-60
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 237 2e-60
ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago trunc... 235 7e-60
ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis tha... 234 2e-59
ref|XP_007155403.1| hypothetical protein PHAVU_003G198500g [Phas... 233 3e-59
ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutr... 233 3e-59
ref|XP_002872551.1| RNA-dependent RNA polymerase 2 [Arabidopsis ... 233 4e-59
>gb|EYU42543.1| hypothetical protein MIMGU_mgv1a000463mg [Mimulus guttatus]
Length = 1135
Score = 291 bits (745), Expect = 1e-76
Identities = 140/206 (67%), Positives = 168/206 (81%), Gaps = 4/206 (1%)
Frame = +3
Query: 9 KCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRATIH 188
KCLELA LHSMAVDFAK+GAPAEMPR LKPREFPDFMER+E+PTY+S LGKLYRAT+
Sbjct: 908 KCLELATLHSMAVDFAKSGAPAEMPRALKPREFPDFMERFEQPTYISKGVLGKLYRATVQ 967
Query: 189 FIQETNPN-PDLPNSI-PSNAFDPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAES 362
FI ++N N D N I P + FD DL++DGYE FVE A+ +KE YL+RM +L YYGA S
Sbjct: 968 FIDQSNDNHSDEKNKISPHDYFDQDLVIDGYESFVEIAKEHKEMYLDRMDSLLRYYGAAS 1027
Query: 363 EVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSS--DEEKQKV 536
EVEILTGN +KS YLQ DNRR+GEV++R+LV+VKSLMKEVKGW S C +E+++K+
Sbjct: 1028 EVEILTGNFRKKSDYLQRDNRRYGEVRDRVLVAVKSLMKEVKGWLRSGCDEAVEEDQRKL 1087
Query: 537 ASSWYYVTYHPSYSDGSRNCLGFPWA 614
A++WYYVTYHPSY DGS +CLGFPWA
Sbjct: 1088 AAAWYYVTYHPSYVDGSEHCLGFPWA 1113
>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
Length = 1120
Score = 270 bits (691), Expect = 2e-70
Identities = 129/201 (64%), Positives = 156/201 (77%)
Frame = +3
Query: 9 KCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRATIH 188
KCL+LA LHSMAVDFAKTGA AEMPR+LKPREFPDF+ERW+KP Y+S LGKLYRA ++
Sbjct: 902 KCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFLERWDKPMYISEGVLGKLYRAIVN 961
Query: 189 FIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAESEV 368
+N + +A+D L+ DGYE F+E A+++KE YL+RM +L +YYGAE EV
Sbjct: 962 SSVRSNSDDLGSVRAIQDAYDHALLFDGYEAFIETAKNHKETYLDRMNSLLNYYGAEKEV 1021
Query: 369 EILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSSDEEKQKVASSW 548
EILTGNL +KS YLQ DNRR+ E+K+RILVS KSL KEVKGWF C DE K K+AS+W
Sbjct: 1022 EILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLQKEVKGWFTGCCKEDEHK-KLASAW 1080
Query: 549 YYVTYHPSYSDGSRNCLGFPW 611
Y+VTYHPSY +GS NCLGFPW
Sbjct: 1081 YHVTYHPSYCEGSANCLGFPW 1101
>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
Length = 1119
Score = 266 bits (680), Expect = 4e-69
Identities = 127/203 (62%), Positives = 156/203 (76%)
Frame = +3
Query: 3 SQKCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRAT 182
+ KCL+LA LHSMAVDFAKTGA AEMPR+LKPREFPDFMERW+KP Y+S LGKLYR
Sbjct: 899 NSKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYRGV 958
Query: 183 IHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAES 362
I N + + +A+D DL+V+GYE F+E A+++KE YL+ M +L +YYGAE
Sbjct: 959 IKSYIRRNSDDLSTDRAIQDAYDHDLLVEGYEAFIETAKTHKEMYLDSMNSLLNYYGAEK 1018
Query: 363 EVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSSDEEKQKVAS 542
EVEILTGNL +KS YLQ DNRR+ E+K+RILVS KSL KEVKGWF S C ++++ QK+ S
Sbjct: 1019 EVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLHKEVKGWF-SGCCTEDDHQKLVS 1077
Query: 543 SWYYVTYHPSYSDGSRNCLGFPW 611
+WY+VTYHPSY S NCLGFPW
Sbjct: 1078 AWYHVTYHPSYCHESANCLGFPW 1100
>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum lycopersicum]
Length = 1119
Score = 263 bits (673), Expect = 2e-68
Identities = 127/203 (62%), Positives = 153/203 (75%)
Frame = +3
Query: 3 SQKCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRAT 182
+ KCL+LA LHSMAVDFAKTGA AEMPR+LKPREFPDFMERW+KP Y+S LGKLYR
Sbjct: 899 NSKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYRGV 958
Query: 183 IHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAES 362
+ N + + +A+D DL+V+GYE F E A+++K YL+ M +L +YYGAE
Sbjct: 959 MKSYIRRNSDDLSADRAIQDAYDHDLLVEGYEAFTETAKTHKAMYLDSMNSLLNYYGAEK 1018
Query: 363 EVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSSDEEKQKVAS 542
EVEILTGNL +KS YLQ DNRR+ E+K+RILVS KSL KEVKGWF S C D+ QK+AS
Sbjct: 1019 EVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLHKEVKGWFTSCCQEDDH-QKLAS 1077
Query: 543 SWYYVTYHPSYSDGSRNCLGFPW 611
+WY+VTYHPSY S NCLGFPW
Sbjct: 1078 AWYHVTYHPSYCHESANCLGFPW 1100
>gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlisea aurea]
Length = 1094
Score = 252 bits (643), Expect = 7e-65
Identities = 131/207 (63%), Positives = 149/207 (71%), Gaps = 3/207 (1%)
Frame = +3
Query: 3 SQKCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRAT 182
S KCLELA LHS AVD+AK+GAPA MPR L PRE+PDFMER KPTY S LGKLYRA
Sbjct: 879 SSKCLELAALHSTAVDYAKSGAPAAMPRALLPREYPDFMERVGKPTYPSTGPLGKLYRAA 938
Query: 183 IHFIQETNPNPDLPNSIPSNAF-DPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAE 359
+ FI + N N IPS F D DL+ DG+E F+E A S++E Y ERM L YYGAE
Sbjct: 939 LRFIGQRNS----ANEIPSRGFFDGDLVADGHEAFLETALSHRERYSERMGQLLSYYGAE 994
Query: 360 SEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSSDEE--KQK 533
E EILTGN+ KSSYL DNRR+GEVK+RILVSVKSLMKE K WF SS++E +K
Sbjct: 995 DEAEILTGNIESKSSYLSRDNRRYGEVKDRILVSVKSLMKEAKVWFGDGLSSEKEGDDRK 1054
Query: 534 VASSWYYVTYHPSYSDGSRNCLGFPWA 614
+AS+WY VTYHP Y G RNC GFPWA
Sbjct: 1055 LASAWYVVTYHPRYGVGRRNCSGFPWA 1081
>gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
Length = 1115
Score = 246 bits (628), Expect = 4e-63
Identities = 116/203 (57%), Positives = 155/203 (76%)
Frame = +3
Query: 3 SQKCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRAT 182
S+ CL+LA LHSMAVDFAKTGAPAEMPR L+PR++PDFMER ++P YVS+ ALGKLYRAT
Sbjct: 895 SENCLQLATLHSMAVDFAKTGAPAEMPRALRPRDYPDFMERLDRPMYVSNGALGKLYRAT 954
Query: 183 IHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAES 362
+ + + N A+D DL V+G+E F+ AES+++ Y+++M + +YY ES
Sbjct: 955 VESESQGSSNLVWSEKTAEAAYDRDLEVNGFEEFIALAESHRDMYIDKMNGIMNYYELES 1014
Query: 363 EVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSSDEEKQKVAS 542
E E+LTGNL ++++YLQ DNRR+ EVK+RIL++VKSL +E KGWFE SC + E+QK+AS
Sbjct: 1015 EDEVLTGNLRKRAAYLQRDNRRYFEVKDRILLAVKSLQREAKGWFEGSCEA-MEQQKMAS 1073
Query: 543 SWYYVTYHPSYSDGSRNCLGFPW 611
+WY+VTYHP+Y S NCL FPW
Sbjct: 1074 AWYHVTYHPNYYQKSINCLSFPW 1096
>ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cicer arietinum]
Length = 1122
Score = 244 bits (624), Expect = 1e-62
Identities = 118/203 (58%), Positives = 147/203 (72%)
Frame = +3
Query: 3 SQKCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRAT 182
S+KCLELA LHSMAVDFAKTGAPAEMPR LKPREFPDFMER++KP Y+S+ LGKLYRA
Sbjct: 903 SRKCLELAELHSMAVDFAKTGAPAEMPRALKPREFPDFMERFDKPMYISNGVLGKLYRAL 962
Query: 183 IHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAES 362
+ + N L A+D L V+G+E F+E A S+KE Y ++M +L +Y AE+
Sbjct: 963 VESTTQVRSNIVLSEKFAEEAYDHQLEVNGFEAFLETASSHKEMYAQKMSSLMSFYDAET 1022
Query: 363 EVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSSDEEKQKVAS 542
E E+LTGNL ++SYLQ DNRR+G++K+RIL+SVK L +E K WFES C E Q +AS
Sbjct: 1023 EDEMLTGNLQNRASYLQRDNRRYGDMKDRILISVKDLQREAKEWFESDC-QPHEYQLMAS 1081
Query: 543 SWYYVTYHPSYSDGSRNCLGFPW 611
+WY+VTYHP YS S L FPW
Sbjct: 1082 AWYHVTYHPKYSHESSTFLSFPW 1104
>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
gi|297733815|emb|CBI15062.3| unnamed protein product
[Vitis vinifera]
Length = 1127
Score = 243 bits (620), Expect = 3e-62
Identities = 123/203 (60%), Positives = 149/203 (73%)
Frame = +3
Query: 3 SQKCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRAT 182
S+KCLELA LHSMAVDFAKTGAPAEMPR LKP+EFPDFMER +KP Y+S+ ALGKLYRAT
Sbjct: 897 SKKCLELATLHSMAVDFAKTGAPAEMPRVLKPKEFPDFMERVDKPMYISNGALGKLYRAT 956
Query: 183 IHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAES 362
I + +IP A+D DL VDG+E F+E A+ +KE Y E+M L ++YGAES
Sbjct: 957 IASRVNEKSSFVWSGTIPGAAYDHDLEVDGFETFLEIAKLHKEMYAEKMATLMNFYGAES 1016
Query: 363 EVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSSDEEKQKVAS 542
E E+LTGNL K YLQ DNRRF E+K+RIL+SVKSL KE K W SC + QK+AS
Sbjct: 1017 EDEMLTGNLRNKLMYLQRDNRRFTEMKDRILISVKSLQKEAKEWLYGSC-KPHQHQKMAS 1075
Query: 543 SWYYVTYHPSYSDGSRNCLGFPW 611
+WY+VTYH ++S + N L FPW
Sbjct: 1076 AWYHVTYHSTFSSQTPNFLSFPW 1098
>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
2 [Cucumis sativus]
Length = 1117
Score = 240 bits (612), Expect = 3e-61
Identities = 119/204 (58%), Positives = 149/204 (73%)
Frame = +3
Query: 3 SQKCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRAT 182
S KCLELA LHSMAVDFAKTGAPAEMPR LKPREFPDFMER++KP Y+S + LGKLYRA
Sbjct: 897 SAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAA 956
Query: 183 IHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAES 362
+ I++ +D DL VDG+E F+E AE+YKE Y+E+M L +YYGAE
Sbjct: 957 VKSIEQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEY 1016
Query: 363 EVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSSDEEKQKVAS 542
E EIL G+L ++SYLQ DNR++G++K+RIL+SVK+L KEVK WFE+SC ++ +AS
Sbjct: 1017 EDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSC-DPLNRRMMAS 1075
Query: 543 SWYYVTYHPSYSDGSRNCLGFPWA 614
+WY+VTYHPSY FPWA
Sbjct: 1076 AWYHVTYHPSYFKEDMFYFSFPWA 1099
>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
gi|222868578|gb|EEF05709.1| hypothetical protein
POPTR_0015s08500g [Populus trichocarpa]
Length = 1110
Score = 240 bits (612), Expect = 3e-61
Identities = 119/203 (58%), Positives = 145/203 (71%)
Frame = +3
Query: 3 SQKCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRAT 182
S+KCL+LA LHSMAVDFAKTGAPAEMP YLKPREFPDFMER EK Y+S LGKLYR
Sbjct: 892 SEKCLQLATLHSMAVDFAKTGAPAEMPLYLKPREFPDFMERAEKQMYISDGVLGKLYRDI 951
Query: 183 IHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAES 362
++ N I +D DL V G+E F+ A YKE+Y+E+M L YYGA++
Sbjct: 952 HDSTRQERSNFMWSKKIAEATYDQDLEVKGFEDFLGIASIYKEKYMEKMSTLMDYYGAKT 1011
Query: 363 EVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSSDEEKQKVAS 542
E EILTGNL + +YLQ DNR++G+VK+RILVS+K+L KE K WFESSC+ E Q +AS
Sbjct: 1012 EDEILTGNLRHRPTYLQRDNRKYGDVKDRILVSLKNLKKEAKEWFESSCNPTEH-QCMAS 1070
Query: 543 SWYYVTYHPSYSDGSRNCLGFPW 611
+WY+VTYHP+Y NCL FPW
Sbjct: 1071 AWYHVTYHPTYFHERMNCLSFPW 1093
>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
gi|462407047|gb|EMJ12511.1| hypothetical protein
PRUPE_ppa000513mg [Prunus persica]
Length = 1118
Score = 239 bits (611), Expect = 4e-61
Identities = 115/201 (57%), Positives = 150/201 (74%)
Frame = +3
Query: 9 KCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRATIH 188
KCL+LA+LHSMAVDFAKTGAPAEM R LKP+EFPDFMER +KP Y+S+ ALGKLYRA +
Sbjct: 900 KCLQLADLHSMAVDFAKTGAPAEMSRTLKPKEFPDFMERVDKPMYISNGALGKLYRAVVG 959
Query: 189 FIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAESEV 368
+ + N I A+D DL VDG E +E A+ +++ Y+E+M+ + +YYGA +E
Sbjct: 960 SVLQEKTNLVWSEQIAEAAYDQDLEVDGLESVLEVAKGHRDMYIEKMRTMMNYYGAVTED 1019
Query: 369 EILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSSDEEKQKVASSW 548
EILTGNL +++YLQ DNRR+G++K+RI +S+K+L KE KG FESSC E Q++AS+W
Sbjct: 1020 EILTGNLRNRAAYLQRDNRRYGDMKDRISLSLKNLQKEAKGLFESSCPVSEH-QRMASAW 1078
Query: 549 YYVTYHPSYSDGSRNCLGFPW 611
Y+VTYHPSY NCL FPW
Sbjct: 1079 YHVTYHPSYFQQDMNCLSFPW 1099
>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223550546|gb|EEF52033.1| RNA-dependent RNA polymerase,
putative [Ricinus communis]
Length = 983
Score = 238 bits (608), Expect = 8e-61
Identities = 117/203 (57%), Positives = 145/203 (71%)
Frame = +3
Query: 3 SQKCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRAT 182
S KCL+LA LHSMAVDFAKTGAPAEMP+ LKP+EFPDFMER +K Y+S LGKLYR T
Sbjct: 747 SSKCLQLAELHSMAVDFAKTGAPAEMPKALKPKEFPDFMERIDKKMYISGGVLGKLYRGT 806
Query: 183 IHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAES 362
+ ++ +I +D DL V G+E FVE A S+K+ Y+E++ L YY A+
Sbjct: 807 LDSTRQQRSKFVWTENIAEATYDHDLEVKGFEEFVEIAISHKDMYVEKLSGLMDYYEAKK 866
Query: 363 EVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSSDEEKQKVAS 542
E EILTGNL K+ YLQ DNRR+G+ K+RIL+SVKSL KE K WFES C + +EKQ++AS
Sbjct: 867 EDEILTGNLQNKAMYLQRDNRRYGDTKDRILISVKSLQKEAKEWFESCCQA-KEKQRLAS 925
Query: 543 SWYYVTYHPSYSDGSRNCLGFPW 611
+WY+VTYHPSY CL FPW
Sbjct: 926 AWYHVTYHPSYFQEGITCLSFPW 948
>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 238 bits (606), Expect = 1e-60
Identities = 117/203 (57%), Positives = 141/203 (69%)
Frame = +3
Query: 3 SQKCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRAT 182
S+ CL LA LHSMAVDFAKTGAPAEMPR LKPREFPDFM+R KP Y S LGKLYRAT
Sbjct: 897 SENCLALATLHSMAVDFAKTGAPAEMPRALKPREFPDFMQRGNKPMYTSSGVLGKLYRAT 956
Query: 183 IHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAES 362
I+ +T + +D DL V+G+E + AE++KE Y ERM L YY E
Sbjct: 957 INSTVQTRSKFVWTKEMAELVYDHDLEVNGFESLISVAETHKEMYEERMSLLMSYYDVEY 1016
Query: 363 EVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSSDEEKQKVAS 542
E EILTGN+ K+ +L DNRR+GE+KERI++SVK L +E K WF+SSCS +E QK+AS
Sbjct: 1017 EDEILTGNIYNKAQFLLRDNRRYGEMKERIVLSVKDLQREAKEWFKSSCSKADEHQKLAS 1076
Query: 543 SWYYVTYHPSYSDGSRNCLGFPW 611
+WYYVTYHP+Y N L FPW
Sbjct: 1077 AWYYVTYHPNYFQERMNSLSFPW 1099
>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 238 bits (606), Expect = 1e-60
Identities = 117/203 (57%), Positives = 142/203 (69%)
Frame = +3
Query: 3 SQKCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRAT 182
S+ CL LA LHSMAVDFAKTGAPAEMPR LKPREFPDFM+R KP Y S LGKLYRAT
Sbjct: 897 SENCLALATLHSMAVDFAKTGAPAEMPRALKPREFPDFMQRGNKPMYTSSGVLGKLYRAT 956
Query: 183 IHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAES 362
I+ + + A+D DL V+G+E + AE++KE Y ERM L YY E
Sbjct: 957 INSTVQIRSKFVWTKEMAELAYDHDLEVNGFESLISVAETHKEMYEERMSLLMSYYDVEY 1016
Query: 363 EVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSSDEEKQKVAS 542
E EILTGN+ K+ +L DNRR+GE+KERI++SVK L +E K WF+SSCS +E QK+AS
Sbjct: 1017 EDEILTGNMYNKAQFLLRDNRRYGEMKERIVLSVKDLQREAKEWFKSSCSKADEHQKLAS 1076
Query: 543 SWYYVTYHPSYSDGSRNCLGFPW 611
+WYYVTYHP+Y + N L FPW
Sbjct: 1077 AWYYVTYHPNYFEERMNSLSFPW 1099
>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
Length = 1131
Score = 237 bits (604), Expect = 2e-60
Identities = 119/203 (58%), Positives = 143/203 (70%)
Frame = +3
Query: 3 SQKCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRAT 182
S KCL LA LHSMAVDFAKTGAPAEMP LKP+EFPDFMER +KP Y+S LGKLYRAT
Sbjct: 913 SSKCLHLATLHSMAVDFAKTGAPAEMPLALKPKEFPDFMEREDKPRYISFGVLGKLYRAT 972
Query: 183 IHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAES 362
+ I + N I ++D DL VDG+E F+ AES+KE Y E M AL +YYGA +
Sbjct: 973 LDSIMQIRSNAIWSEKIAEASYDHDLEVDGFEAFLGVAESHKEMYEEEMNALMNYYGAST 1032
Query: 363 EVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSSDEEKQKVAS 542
E EILTGNL ++SYLQ DNRR+G++K+RIL+S K+L E K WF SSC +E Q +AS
Sbjct: 1033 EDEILTGNLRNRASYLQRDNRRYGDMKDRILLSAKNLQNEAKEWFGSSCKENEHPQ-LAS 1091
Query: 543 SWYYVTYHPSYSDGSRNCLGFPW 611
+WY+VTY PSY L FPW
Sbjct: 1092 AWYHVTYSPSYCKERMALLSFPW 1114
>ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago truncatula]
gi|355509999|gb|AES91141.1| Rna-dependent RNA polymerase
[Medicago truncatula]
Length = 1308
Score = 235 bits (600), Expect = 7e-60
Identities = 117/203 (57%), Positives = 145/203 (71%)
Frame = +3
Query: 3 SQKCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRAT 182
S+KCLELA LHSMAVDFAKTGAPAEMPR LKPREFPDFMER+EKP Y+S LGKLYRAT
Sbjct: 904 SRKCLELAELHSMAVDFAKTGAPAEMPRSLKPREFPDFMERFEKPMYISKGVLGKLYRAT 963
Query: 183 IHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAES 362
I + + + A+D L VDG+E F+E A S+++ Y ++M +L +YGA +
Sbjct: 964 IDSNLQVRFDMVMSEKFAKEAYDHQLEVDGFEVFLETALSHRDMYAQKMISLMSFYGATT 1023
Query: 363 EVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSSDEEKQKVAS 542
E E+LTGNL ++SYLQ DNRR+G++K+RIL+SVK L E K WFES C E Q +AS
Sbjct: 1024 EDEMLTGNLQNRASYLQRDNRRYGDMKDRILISVKDLQLEAKEWFESDC-QPHEYQLMAS 1082
Query: 543 SWYYVTYHPSYSDGSRNCLGFPW 611
+WY+VTYHP Y S L FPW
Sbjct: 1083 AWYHVTYHPKYYIESSTFLSFPW 1105
Score = 103 bits (257), Expect = 4e-20
Identities = 50/70 (71%), Positives = 55/70 (78%)
Frame = +3
Query: 3 SQKCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRAT 182
S+KCLELA LHSMAVDFAKTGA AEMPR LKP+EFPDFMER+EKP YVS LGKLYRA
Sbjct: 1153 SRKCLELAELHSMAVDFAKTGALAEMPRVLKPKEFPDFMERFEKPMYVSKGVLGKLYRAL 1212
Query: 183 IHFIQETNPN 212
+ + N
Sbjct: 1213 VESTMQLTSN 1222
Score = 55.8 bits (133), Expect = 9e-06
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +3
Query: 441 KERILVSVK--SLMKEVKGWFESSCSSDEEKQKVASSWYYVTYHPSYSDGSRNCLGFPW 611
K+ +++++K L EVK WFES C E Q +AS+WY+V +HP Y S N + FPW
Sbjct: 1232 KKHMIINLKLMDLQLEVKEWFESDCQPHEH-QLMASAWYHVIHHPKYYHKSSNFVSFPW 1289
>ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis thaliana]
gi|75318859|sp|O82504.1|RDR2_ARATH RecName:
Full=RNA-dependent RNA polymerase 2; Short=AtRDRP2;
AltName: Full=Protein SILENCING MOVEMENT DEFICIENT 1;
AltName: Full=RNA-directed RNA polymerase 2
gi|3600048|gb|AAC35535.1| similar to hypothetical
proteins in Schizosaccharomyces pombe (GB:Z98533) and C.
elegans (GB:Z48334 and Z78419) [Arabidopsis thaliana]
gi|4850292|emb|CAB43048.1| putative RNA-directed RNA
polymerase [Arabidopsis thaliana]
gi|7267812|emb|CAB81214.1| putative RNA-directed RNA
polymerase [Arabidopsis thaliana]
gi|332657576|gb|AEE82976.1| RNA-dependent RNA polymerase
2 [Arabidopsis thaliana]
Length = 1133
Score = 234 bits (596), Expect = 2e-59
Identities = 112/203 (55%), Positives = 147/203 (72%)
Frame = +3
Query: 3 SQKCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRAT 182
SQKCLELANLHS AVDFAKTGAPAEMP LKPREFPDF+ER+EKPTY+S S GKLYRA
Sbjct: 905 SQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAV 964
Query: 183 IHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAES 362
+ + P + +++ A+D L G+E F+E A+++++ Y E++ +L YYGA +
Sbjct: 965 KSSLAQRKPEAESEDTV---AYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAAN 1021
Query: 363 EVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSSDEEKQKVAS 542
E EILTG L K YL DNRR+G++K+RI +SVK L KE GWFE SC +++K+K+AS
Sbjct: 1022 EEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKSCEDEQQKKKLAS 1081
Query: 543 SWYYVTYHPSYSDGSRNCLGFPW 611
+WYYVTY+P++ D L FPW
Sbjct: 1082 AWYYVTYNPNHRDEKLTFLSFPW 1104
>ref|XP_007155403.1| hypothetical protein PHAVU_003G198500g [Phaseolus vulgaris]
gi|561028757|gb|ESW27397.1| hypothetical protein
PHAVU_003G198500g [Phaseolus vulgaris]
Length = 1119
Score = 233 bits (595), Expect = 3e-59
Identities = 116/204 (56%), Positives = 148/204 (72%), Gaps = 1/204 (0%)
Frame = +3
Query: 3 SQKCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRAT 182
S+KCLELA LHSMAVDFAKTGAPA MPR LKPREFPDFMER EKP Y+S LGKLYRA
Sbjct: 899 SRKCLELAELHSMAVDFAKTGAPAAMPRVLKPREFPDFMERVEKPMYISKGVLGKLYRAI 958
Query: 183 IHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAES 362
I + + + A+D L V+G+E F+E A S+KE Y ++M +L ++YGAE+
Sbjct: 959 IESQMQIKYSFVWSEKLAEEAYDRSLEVNGFEAFLETASSHKEMYAQKMSSLMNFYGAET 1018
Query: 363 EVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSSDEEKQKVAS 542
E E+L GNL ++SYLQ DNRR+G++K+RIL+SVK+L +E K WFE+SC E + +AS
Sbjct: 1019 EDEMLLGNLQNRASYLQRDNRRYGDMKDRILLSVKNLQREAKEWFETSC-QPHEYRPMAS 1077
Query: 543 SWYYVTYHPSYSDGSRNC-LGFPW 611
+WY+VTYHPSY +C L FPW
Sbjct: 1078 AWYHVTYHPSYYCQESSCFLSFPW 1101
>ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutrema salsugineum]
gi|557097970|gb|ESQ38406.1| hypothetical protein
EUTSA_v10028370mg [Eutrema salsugineum]
Length = 1124
Score = 233 bits (595), Expect = 3e-59
Identities = 111/203 (54%), Positives = 146/203 (71%)
Frame = +3
Query: 3 SQKCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRAT 182
SQKCLELANLHS AVDFAKTGAPAEMP LKPREFPDF+ER+EKP Y+S S GKLYRA
Sbjct: 903 SQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPMYISESVFGKLYRAV 962
Query: 183 IHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAES 362
+ + P S + A+D L G+E F+E A+++++ Y E++ +L +YYGA +
Sbjct: 963 KRSLAQRKPEE--AESEVTMAYDSTLEEAGFESFIETAKAHRDMYAEKLSSLMNYYGAAN 1020
Query: 363 EVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSSDEEKQKVAS 542
E EILTG L K YLQ DNRR+G++K+RI +SVK L +E GWF+ SC +++++K+AS
Sbjct: 1021 EEEILTGILRTKEMYLQRDNRRYGDMKDRITLSVKDLQREAMGWFDKSCKEEQQRKKLAS 1080
Query: 543 SWYYVTYHPSYSDGSRNCLGFPW 611
+WYYVTY+PS+ D L FPW
Sbjct: 1081 AWYYVTYNPSHRDEKPKFLSFPW 1103
>ref|XP_002872551.1| RNA-dependent RNA polymerase 2 [Arabidopsis lyrata subsp. lyrata]
gi|297318388|gb|EFH48810.1| RNA-dependent RNA polymerase
2 [Arabidopsis lyrata subsp. lyrata]
Length = 1134
Score = 233 bits (593), Expect = 4e-59
Identities = 111/203 (54%), Positives = 145/203 (71%)
Frame = +3
Query: 3 SQKCLELANLHSMAVDFAKTGAPAEMPRYLKPREFPDFMERWEKPTYVSHSALGKLYRAT 182
SQKCLELANLHS AVDFAKTGAPAEMP LKPREFPDF+ER+EKPTY+S S GKLYRA
Sbjct: 906 SQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAV 965
Query: 183 IHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLERMKALFHYYGAES 362
+ + P + ++ +D L G+E F+E A+++++ Y E++ +L YYGA +
Sbjct: 966 RSSLAQRKPEAESDGTL---TYDATLEEAGFESFIETAKAHRDMYAEKLTSLMIYYGAVN 1022
Query: 363 EVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESSCSSDEEKQKVAS 542
E EILTG L K YL DNRR+G++K+RI +SVK L KE GWF+ SC +++K+K+AS
Sbjct: 1023 EEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFDKSCEDEQQKKKLAS 1082
Query: 543 SWYYVTYHPSYSDGSRNCLGFPW 611
+WYYVTY+PS+ D L FPW
Sbjct: 1083 AWYYVTYNPSHRDEKLTFLSFPW 1105