BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00006263
         (755 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus not...   170   6e-40
ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su...   170   6e-40
ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Popu...   170   6e-40
ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II su...   170   6e-40
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ...   170   6e-40
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta...   170   6e-40
ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su...   170   6e-40
gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia...   170   6e-40
gb|AAZ08467.1| RNA polymerase II second largest subunit [Linanth...   169   7e-40
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode...   169   1e-39
ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II su...   168   2e-39
gb|ADE76913.1| unknown [Picea sitchensis]                             168   2e-39
gb|AAY89346.1| RNA polymerase II second largest subunit [Nicotia...   168   2e-39
ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phas...   167   3e-39
ref|XP_007025631.1| DNA-directed RNA polymerase family protein i...   167   3e-39
ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II su...   167   3e-39
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su...   167   3e-39
ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago trunca...   167   3e-39
gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrh...   167   3e-39
ref|XP_006859038.1| hypothetical protein AMTR_s00068p00181410 [A...   167   4e-39

>gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
          Length = 1193

 Score =  170 bits (430), Expect = 6e-40
 Identities = 79/81 (97%), Positives = 81/81 (100%)
 Frame = +3

Query: 3    DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
            DCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI
Sbjct: 1098 DCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 1157

Query: 183  PYACKLLFQELMAMAIAPRMM 245
            PYACKLLFQELMAMAIAPRM+
Sbjct: 1158 PYACKLLFQELMAMAIAPRML 1178


>ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Solanum
            tuberosum]
          Length = 1191

 Score =  170 bits (430), Expect = 6e-40
 Identities = 79/81 (97%), Positives = 81/81 (100%)
 Frame = +3

Query: 3    DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
            DCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI
Sbjct: 1096 DCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 1155

Query: 183  PYACKLLFQELMAMAIAPRMM 245
            PYACKLLFQELMAMAIAPRM+
Sbjct: 1156 PYACKLLFQELMAMAIAPRML 1176


>ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Populus trichocarpa]
            gi|550340301|gb|EEE85647.2| hypothetical protein
            POPTR_0004s04320g [Populus trichocarpa]
          Length = 1215

 Score =  170 bits (430), Expect = 6e-40
 Identities = 79/81 (97%), Positives = 81/81 (100%)
 Frame = +3

Query: 3    DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
            DCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI
Sbjct: 1120 DCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 1179

Query: 183  PYACKLLFQELMAMAIAPRMM 245
            PYACKLLFQELMAMAIAPRM+
Sbjct: 1180 PYACKLLFQELMAMAIAPRML 1200


>ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Fragaria
            vesca subsp. vesca]
          Length = 1191

 Score =  170 bits (430), Expect = 6e-40
 Identities = 79/81 (97%), Positives = 81/81 (100%)
 Frame = +3

Query: 3    DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
            DCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI
Sbjct: 1097 DCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 1156

Query: 183  PYACKLLFQELMAMAIAPRMM 245
            PYACKLLFQELMAMAIAPRM+
Sbjct: 1157 PYACKLLFQELMAMAIAPRML 1177


>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
            gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
            Full=DNA-directed RNA polymerase II subunit RPB2;
            Short=RNA polymerase II subunit 2; Short=RNA polymerase
            II subunit B2; AltName: Full=DNA-directed RNA polymerase
            II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
            polymerase II subunit 2 [Solanum lycopersicum]
          Length = 1191

 Score =  170 bits (430), Expect = 6e-40
 Identities = 79/81 (97%), Positives = 81/81 (100%)
 Frame = +3

Query: 3    DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
            DCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI
Sbjct: 1096 DCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 1155

Query: 183  PYACKLLFQELMAMAIAPRMM 245
            PYACKLLFQELMAMAIAPRM+
Sbjct: 1156 PYACKLLFQELMAMAIAPRML 1176


>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
            gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
            II subunit, putative [Ricinus communis]
          Length = 1194

 Score =  170 bits (430), Expect = 6e-40
 Identities = 79/81 (97%), Positives = 81/81 (100%)
 Frame = +3

Query: 3    DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
            DCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI
Sbjct: 1099 DCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 1158

Query: 183  PYACKLLFQELMAMAIAPRMM 245
            PYACKLLFQELMAMAIAPRM+
Sbjct: 1159 PYACKLLFQELMAMAIAPRML 1179


>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
            vinifera] gi|147841183|emb|CAN72948.1| hypothetical
            protein VITISV_033708 [Vitis vinifera]
            gi|302143287|emb|CBI21848.3| unnamed protein product
            [Vitis vinifera]
          Length = 1193

 Score =  170 bits (430), Expect = 6e-40
 Identities = 79/81 (97%), Positives = 81/81 (100%)
 Frame = +3

Query: 3    DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
            DCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI
Sbjct: 1098 DCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 1157

Query: 183  PYACKLLFQELMAMAIAPRMM 245
            PYACKLLFQELMAMAIAPRM+
Sbjct: 1158 PYACKLLFQELMAMAIAPRML 1178


>gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia x hybrida]
          Length = 1195

 Score =  170 bits (430), Expect = 6e-40
 Identities = 79/81 (97%), Positives = 81/81 (100%)
 Frame = +3

Query: 3    DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
            DCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI
Sbjct: 1100 DCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 1159

Query: 183  PYACKLLFQELMAMAIAPRMM 245
            PYACKLLFQELMAMAIAPRM+
Sbjct: 1160 PYACKLLFQELMAMAIAPRML 1180


>gb|AAZ08467.1| RNA polymerase II second largest subunit [Linanthus californicus]
          Length = 733

 Score =  169 bits (429), Expect = 7e-40
 Identities = 78/81 (96%), Positives = 81/81 (100%)
 Frame = +3

Query: 3   DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
           DCMIAHGAAHFLKERLFDQSDAYR+HVCERCGL+AIANLKKNSFECRGCKNKTDIVQVHI
Sbjct: 640 DCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLVAIANLKKNSFECRGCKNKTDIVQVHI 699

Query: 183 PYACKLLFQELMAMAIAPRMM 245
           PYACKLLFQELM+MAIAPRMM
Sbjct: 700 PYACKLLFQELMSMAIAPRMM 720


>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
          Length = 1191

 Score =  169 bits (428), Expect = 1e-39
 Identities = 79/81 (97%), Positives = 81/81 (100%)
 Frame = +3

Query: 3    DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
            DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI
Sbjct: 1096 DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 1155

Query: 183  PYACKLLFQELMAMAIAPRMM 245
            PYACKLLFQELM+MAIAPRM+
Sbjct: 1156 PYACKLLFQELMSMAIAPRML 1176


>ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Citrus
            sinensis]
          Length = 1195

 Score =  168 bits (425), Expect = 2e-39
 Identities = 78/81 (96%), Positives = 80/81 (98%)
 Frame = +3

Query: 3    DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
            DCMIAHGAAHFLKERLFDQSDAYR+HVCE CGLIAIANLKKNSFECRGCKNKTDIVQVHI
Sbjct: 1099 DCMIAHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKNSFECRGCKNKTDIVQVHI 1158

Query: 183  PYACKLLFQELMAMAIAPRMM 245
            PYACKLLFQELMAMAIAPRM+
Sbjct: 1159 PYACKLLFQELMAMAIAPRML 1179


>gb|ADE76913.1| unknown [Picea sitchensis]
          Length = 135

 Score =  168 bits (425), Expect = 2e-39
 Identities = 78/80 (97%), Positives = 80/80 (100%)
 Frame = +3

Query: 3   DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
           DCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSF+CRGCKNKTDIVQVHI
Sbjct: 39  DCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNKTDIVQVHI 98

Query: 183 PYACKLLFQELMAMAIAPRM 242
           PYACKLLFQELMAMAIAPRM
Sbjct: 99  PYACKLLFQELMAMAIAPRM 118


>gb|AAY89346.1| RNA polymerase II second largest subunit [Nicotiana sylvestris]
          Length = 1087

 Score =  168 bits (425), Expect = 2e-39
 Identities = 78/81 (96%), Positives = 81/81 (100%)
 Frame = +3

Query: 3    DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
            DCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK+SFECRGCKNKTDIVQVHI
Sbjct: 999  DCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKSSFECRGCKNKTDIVQVHI 1058

Query: 183  PYACKLLFQELMAMAIAPRMM 245
            PYACKLLFQELMAMAIAPRM+
Sbjct: 1059 PYACKLLFQELMAMAIAPRML 1079


>ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phaseolus vulgaris]
            gi|561021391|gb|ESW20162.1| hypothetical protein
            PHAVU_006G185800g [Phaseolus vulgaris]
          Length = 1194

 Score =  167 bits (424), Expect = 3e-39
 Identities = 78/81 (96%), Positives = 81/81 (100%)
 Frame = +3

Query: 3    DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
            DCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQV+I
Sbjct: 1099 DCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYI 1158

Query: 183  PYACKLLFQELMAMAIAPRMM 245
            PYACKLLFQELMAMAIAPRM+
Sbjct: 1159 PYACKLLFQELMAMAIAPRML 1179


>ref|XP_007025631.1| DNA-directed RNA polymerase family protein isoform 1 [Theobroma
            cacao] gi|508780997|gb|EOY28253.1| DNA-directed RNA
            polymerase family protein isoform 1 [Theobroma cacao]
          Length = 1189

 Score =  167 bits (424), Expect = 3e-39
 Identities = 78/81 (96%), Positives = 81/81 (100%)
 Frame = +3

Query: 3    DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
            DCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQV+I
Sbjct: 1096 DCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYI 1155

Query: 183  PYACKLLFQELMAMAIAPRMM 245
            PYACKLLFQELMAMAIAPRM+
Sbjct: 1156 PYACKLLFQELMAMAIAPRML 1176


>ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
            max]
          Length = 1193

 Score =  167 bits (424), Expect = 3e-39
 Identities = 78/81 (96%), Positives = 81/81 (100%)
 Frame = +3

Query: 3    DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
            DCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQV+I
Sbjct: 1099 DCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYI 1158

Query: 183  PYACKLLFQELMAMAIAPRMM 245
            PYACKLLFQELMAMAIAPRM+
Sbjct: 1159 PYACKLLFQELMAMAIAPRML 1179


>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
            max]
          Length = 1192

 Score =  167 bits (424), Expect = 3e-39
 Identities = 78/81 (96%), Positives = 81/81 (100%)
 Frame = +3

Query: 3    DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
            DCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQV+I
Sbjct: 1099 DCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYI 1158

Query: 183  PYACKLLFQELMAMAIAPRMM 245
            PYACKLLFQELMAMAIAPRM+
Sbjct: 1159 PYACKLLFQELMAMAIAPRML 1179


>ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago truncatula]
            gi|355478420|gb|AES59623.1| DNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 1213

 Score =  167 bits (424), Expect = 3e-39
 Identities = 78/81 (96%), Positives = 81/81 (100%)
 Frame = +3

Query: 3    DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
            DCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQV+I
Sbjct: 1118 DCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYI 1177

Query: 183  PYACKLLFQELMAMAIAPRMM 245
            PYACKLLFQELMAMAIAPRM+
Sbjct: 1178 PYACKLLFQELMAMAIAPRML 1198


>gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrhinum majus]
          Length = 1200

 Score =  167 bits (424), Expect = 3e-39
 Identities = 78/81 (96%), Positives = 81/81 (100%)
 Frame = +3

Query: 3    DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
            DCMIAHGAAHFLKERLFDQSDAYRIHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHI
Sbjct: 1105 DCMIAHGAAHFLKERLFDQSDAYRIHVCEQCGLIAIANLKKNSFECRGCKNKTDIVQVHI 1164

Query: 183  PYACKLLFQELMAMAIAPRMM 245
            PYACKLLFQELM+MAIAPRM+
Sbjct: 1165 PYACKLLFQELMSMAIAPRML 1185


>ref|XP_006859038.1| hypothetical protein AMTR_s00068p00181410 [Amborella trichopoda]
            gi|548863150|gb|ERN20505.1| hypothetical protein
            AMTR_s00068p00181410 [Amborella trichopoda]
          Length = 1190

 Score =  167 bits (423), Expect = 4e-39
 Identities = 77/80 (96%), Positives = 80/80 (100%)
 Frame = +3

Query: 3    DCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHI 182
            DCMIAHGAAHFLKERLFDQSDAYR+HVCE+CGLIAIANLKKNSFECRGCKNKTDI+QVHI
Sbjct: 1091 DCMIAHGAAHFLKERLFDQSDAYRVHVCEQCGLIAIANLKKNSFECRGCKNKTDIIQVHI 1150

Query: 183  PYACKLLFQELMAMAIAPRM 242
            PYACKLLFQELMAMAIAPRM
Sbjct: 1151 PYACKLLFQELMAMAIAPRM 1170