BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00006019
         (2693 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...  1402   0.0  
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer...  1400   0.0  
emb|CBI35100.3| unnamed protein product [Vitis vinifera]             1355   0.0  
ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...  1336   0.0  
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...  1291   0.0  
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro...  1289   0.0  
gb|EYU27090.1| hypothetical protein MIMGU_mgv1a0004241mg, partia...  1288   0.0  
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer...  1285   0.0  
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...  1280   0.0  
ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phas...  1276   0.0  
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...  1265   0.0  
gb|EPS62433.1| hypothetical protein M569_12357, partial [Genlise...  1259   0.0  
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer...  1257   0.0  
ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer...  1252   0.0  
gb|EXC31692.1| putative DNA-directed RNA polymerase I subunit RP...  1252   0.0  
ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymer...  1239   0.0  
ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I sub...  1225   0.0  
ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I sub...  1218   0.0  
ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Caps...  1214   0.0  
ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arab...  1213   0.0  

>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
            lycopersicum]
          Length = 1184

 Score = 1402 bits (3629), Expect = 0.0
 Identities = 698/915 (76%), Positives = 773/915 (84%), Gaps = 18/915 (1%)
 Frame = -1

Query: 2693 SKLKLRIWFTNPEIFSPQKER-SRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIV 2517
            S LKLRIWF  PE+F PQKER S+ M DALYPFECRQAK+SYSGKF+VD+ FQYGDG ++
Sbjct: 64   SSLKLRIWFGKPELFPPQKERASKAMHDALYPFECRQAKISYSGKFLVDICFQYGDGAVI 123

Query: 2516 REKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKG 2337
            REKF  GQ PIMLKSKLCHLR A+D KKLV  KEEPSEMGGYFIL GLERVIR +ILPK 
Sbjct: 124  REKFNFGQFPIMLKSKLCHLRGADDSKKLVAYKEEPSEMGGYFILKGLERVIRLIILPKR 183

Query: 2336 NYPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLL 2157
            NYPTSM RNSFRDRREGY+DKAV IRCVREDQSAV++KLYYL NGSARLGFWIQGREYLL
Sbjct: 184  NYPTSMARNSFRDRREGYSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLL 243

Query: 2156 PVGIILKALTETTDHEIYVSLTCCYNDKSDRGKGSVGTQLIGERAKIILDELQDFSLCTR 1977
            PVGIILKAL +TTDHEIYV+LTCCYN++ DR KGSVGTQL+GERAKIILDE+Q  SL TR
Sbjct: 244  PVGIILKALVDTTDHEIYVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTR 303

Query: 1976 TQCLQHIGEHFQPVMVGMEKQSYSDVANAVLRDYIFVHLDDNIDKFNLLIVMLQKLFSLV 1797
             QCL+HIGEHFQPV++GM+  SY  VA+AVLRDYIFVHLD+N DKFNLLI MLQKLFSL+
Sbjct: 304  AQCLRHIGEHFQPVVIGMQNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLI 363

Query: 1796 DQTSVPDNPDSLQNQECLLPGHLITIYLKEKLQDWLLRAKRTLQDEVENKTKKFELSSVA 1617
            DQTSV DNPDSLQNQE LLPGHLITIYLKEKLQDWLL+ +R+LQ+E + + KKFELSS+ 
Sbjct: 364  DQTSVLDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLT 423

Query: 1616 DVTKVLDKCSPKQIGAAIENMLKTGRLVTQSGLDQLQRAGMTIMAERLNYLRFISHFRAV 1437
            DV K ++K +PKQIG  IE+MLKTGRL TQSGLD  QRAGMT+ AE+LN+LRF+SHFRAV
Sbjct: 424  DVKKAIEKNAPKQIGLTIESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAV 483

Query: 1436 HRGASFAGLRTTSVRKLLPESWGFMCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKD 1257
            HRGASFAGLRTTSVRKLLPESWGF+CPVHTPDGEPCGLLNHMT+SCRITSYYDS+G VKD
Sbjct: 484  HRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKD 543

Query: 1256 FLEIRKSILKVLVSIGMTXXXXXXXXXXXPEVLPVLLDGRVVGSIPFDIIEKAVSHMRRL 1077
            F ++R SIL VL++IGMT           PE+L VLLDGR+ G IP D+IEKAV+H+RRL
Sbjct: 544  FFKMRMSILNVLIAIGMTPSSPKLVQAGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRL 603

Query: 1076 KVSDTSAIPEDLEVGYVPLSMGGAYPGLYLFTSACRFVRPVRNITIPSEESNNIELIGPF 897
            K+S TS+IP DLEVGY+PLSM GAYPGLYLFTS  RFVRPVRNI+ P+EE N++ELIGPF
Sbjct: 604  KLSSTSSIPVDLEVGYIPLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGPF 663

Query: 896  EQVYMEISCP-----------------XXXXXXXXDVXXXTPWSDHNQSPRNMYQCQMAK 768
            EQVYMEISCP                          V   TPWSDHNQSPRNMYQCQM K
Sbjct: 664  EQVYMEISCPDGGDGGRKTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGK 723

Query: 767  QTMGFSCQSLSARADQKMYHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYSGYDM 588
            QTMGFS Q+L+ RADQK+YHLQTPQTPIVRTK YEKY +DD PLGTNAIVAVLAYSGYDM
Sbjct: 724  QTMGFSSQALNCRADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDM 783

Query: 587  EDAMVLNKSSVERGMCRGYIYQTETIDLSEQKNKSDPSQRSFGRSNLDKTWHHLIDSDGL 408
            EDAMVLNKSSV+RGMC G+IYQTETIDL+EQ  KSD +QR F RSNLDK+ H LIDSDGL
Sbjct: 784  EDAMVLNKSSVDRGMCHGHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDSDGL 843

Query: 407  PFVGQRINPDEPYCSIYNEITSGVSLNKLKGSDHXXXXXXXXXVKNKKHIQKANVRFRHP 228
            P+VGQRINP+EPYCSIYNEITS  +  KLKGS+          VKNK H+QKAN+RFR  
Sbjct: 844  PYVGQRINPNEPYCSIYNEITSQTTCMKLKGSEPVVVDYVAVDVKNKAHLQKANIRFRRS 903

Query: 227  RNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESI 48
            RNPVIGDKFSSRHGQKGVCSQLW D DMPFS  TGMRPDLIINPHAFPSRMTIAMLLESI
Sbjct: 904  RNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESI 963

Query: 47   AAKGGALNGNFVDAT 3
            AAKGGAL+G FVDAT
Sbjct: 964  AAKGGALHGKFVDAT 978


>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            [Solanum tuberosum]
          Length = 1179

 Score = 1400 bits (3625), Expect = 0.0
 Identities = 695/915 (75%), Positives = 774/915 (84%), Gaps = 18/915 (1%)
 Frame = -1

Query: 2693 SKLKLRIWFTNPEIFSPQKER-SRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIV 2517
            S LKLRIWF  PE+F PQKER S+ M DALYPFECRQAKLSY+GKF+VD+ FQYGDG ++
Sbjct: 59   SSLKLRIWFGKPELFPPQKERASKTMHDALYPFECRQAKLSYTGKFLVDICFQYGDGAVI 118

Query: 2516 REKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKG 2337
            REKF  GQ PIMLKSKLCHLR A+D +KL+  KEEPSEMGGYFIL GLERVIR +ILPK 
Sbjct: 119  REKFNFGQFPIMLKSKLCHLRGADDSRKLIAYKEEPSEMGGYFILKGLERVIRLIILPKR 178

Query: 2336 NYPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLL 2157
            NYPTSM RNSFRDRREGY+DKAV IRCVREDQSAV++KLYYL NGSARLGFWIQGREYLL
Sbjct: 179  NYPTSMARNSFRDRREGYSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLL 238

Query: 2156 PVGIILKALTETTDHEIYVSLTCCYNDKSDRGKGSVGTQLIGERAKIILDELQDFSLCTR 1977
            PVGIILKAL +TTDHEIYV+LTCCYN++ DR KGSVGTQL+GERAKIILDE+Q  SL TR
Sbjct: 239  PVGIILKALVDTTDHEIYVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTR 298

Query: 1976 TQCLQHIGEHFQPVMVGMEKQSYSDVANAVLRDYIFVHLDDNIDKFNLLIVMLQKLFSLV 1797
             QCL+HIGEHFQPV++GM+  SY  VA+AVLRDYIFVHLD+N DKFNLLI MLQKLFSL+
Sbjct: 299  AQCLRHIGEHFQPVVIGMQNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLI 358

Query: 1796 DQTSVPDNPDSLQNQECLLPGHLITIYLKEKLQDWLLRAKRTLQDEVENKTKKFELSSVA 1617
            DQTSV DNPDSLQNQE LLPGHLITIYLKEKLQDWLL+ +R+LQ+E + + KKFELSS+ 
Sbjct: 359  DQTSVLDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLT 418

Query: 1616 DVTKVLDKCSPKQIGAAIENMLKTGRLVTQSGLDQLQRAGMTIMAERLNYLRFISHFRAV 1437
            DV K ++K +PKQIG AIE+MLKTGRL TQSGLD  QRAGMT+ AE+LN+LRF+SHFRAV
Sbjct: 419  DVKKAIEKNAPKQIGLAIESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAV 478

Query: 1436 HRGASFAGLRTTSVRKLLPESWGFMCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKD 1257
            HRGASFAGLRTTSVRKLLPESWGF+CPVHTPDGEPCGLLNHMT+SCRITSYYDS+G VKD
Sbjct: 479  HRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKD 538

Query: 1256 FLEIRKSILKVLVSIGMTXXXXXXXXXXXPEVLPVLLDGRVVGSIPFDIIEKAVSHMRRL 1077
            F ++R SIL VL++IGMT           PE+L VLLDGR+ G IP D+IEKAV+H+RRL
Sbjct: 539  FFKMRMSILNVLIAIGMTPPSPKLVQGGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRL 598

Query: 1076 KVSDTSAIPEDLEVGYVPLSMGGAYPGLYLFTSACRFVRPVRNITIPSEESNNIELIGPF 897
            K+S TS+IP DLEVGY+PLSM GAYPGLYLFTS  RFVRPVRNI+ P+EE N++EL+GPF
Sbjct: 599  KLSSTSSIPVDLEVGYIPLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELVGPF 658

Query: 896  EQVYMEISCP-----------------XXXXXXXXDVXXXTPWSDHNQSPRNMYQCQMAK 768
            EQVYMEISCP                          V   TPWSDHNQSPRNMYQCQM K
Sbjct: 659  EQVYMEISCPDGGDGGRKTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGK 718

Query: 767  QTMGFSCQSLSARADQKMYHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYSGYDM 588
            QTMGFS Q+L+ RADQK+YHLQTPQTPIVRTK YEKY +DD PLGTNAIVAVLAYSGYDM
Sbjct: 719  QTMGFSSQALNCRADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDM 778

Query: 587  EDAMVLNKSSVERGMCRGYIYQTETIDLSEQKNKSDPSQRSFGRSNLDKTWHHLIDSDGL 408
            EDAMVLNKSSV+RGMC G+IYQTETIDL+EQ  KSD +QR F RSNLDK+ H LID+DGL
Sbjct: 779  EDAMVLNKSSVDRGMCHGHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDTDGL 838

Query: 407  PFVGQRINPDEPYCSIYNEITSGVSLNKLKGSDHXXXXXXXXXVKNKKHIQKANVRFRHP 228
            P+VGQRINP+EPYCSIYNEITS  +  KLKGS+          VKNK H+QKAN+RFR  
Sbjct: 839  PYVGQRINPNEPYCSIYNEITSQTTSMKLKGSEPVVVDYVAVDVKNKTHLQKANIRFRRS 898

Query: 227  RNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESI 48
            RNPVIGDKFSSRHGQKGVCSQLW D DMPFS  TGMRPDLIINPHAFPSRMTIAMLLESI
Sbjct: 899  RNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESI 958

Query: 47   AAKGGALNGNFVDAT 3
            AAKGGAL+G FVDAT
Sbjct: 959  AAKGGALHGKFVDAT 973


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score = 1355 bits (3508), Expect = 0.0
 Identities = 675/912 (74%), Positives = 756/912 (82%), Gaps = 18/912 (1%)
 Frame = -1

Query: 2684 KLRIWFTNPEIFSPQKERS-RNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIVREK 2508
            ++ +WF  PE++ PQKERS R M DALYPFECRQAK+SYSGK + D+ FQYG+GV +REK
Sbjct: 16   RIALWFGQPELYPPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREK 75

Query: 2507 FCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGNYP 2328
            F LGQ PIMLKSKLCHLR A DP+KLV  KEE SEMGGYFILNGLERV+R LILPK NYP
Sbjct: 76   FNLGQFPIMLKSKLCHLRGA-DPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYP 134

Query: 2327 TSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLPVG 2148
             SMVRNSFRDRREGYTDKAV IRCVREDQSAVTVKLYYL NGSARLGFWIQGREYLLPVG
Sbjct: 135  MSMVRNSFRDRREGYTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVG 194

Query: 2147 IILKALTETTDHEIYVSLTCCYNDKSDRGKGSVGTQLIGERAKIILDELQDFSLCTRTQC 1968
            ++LKAL +TTDHEIY SLTCCY++K + GKG+VGTQL+GER KIILDE++D SL TR QC
Sbjct: 195  VVLKALIDTTDHEIYESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQC 254

Query: 1967 LQHIGEHFQPVMVGMEKQSYSDVANAVLRDYIFVHLDDNIDKFNLLIVMLQKLFSLVDQT 1788
            LQHIGEHFQ VM G+E +SYS VA+AVLR+YIFVHLD+N DKFNLLI M+QKLFSL+DQT
Sbjct: 255  LQHIGEHFQLVMDGLENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQT 314

Query: 1787 SVPDNPDSLQNQECLLPGHLITIYLKEKLQDWLLRAKRTLQDEVENKTKKFELSSVADVT 1608
            SVPDNPD LQNQE LLPGHLITIYLKEKLQ+WL +A+R LQDE+ NK K FE SS+A V 
Sbjct: 315  SVPDNPDVLQNQEVLLPGHLITIYLKEKLQEWLYKARRLLQDEI-NKRKNFEFSSLAHVK 373

Query: 1607 KVLDKCSPKQIGAAIENMLKTGRLVTQSGLDQLQRAGMTIMAERLNYLRFISHFRAVHRG 1428
            KV+DK   +QI  A+ENMLKTGRLVTQSGLD  QRAGMT+ AERLN+LRF+SHFRAVHRG
Sbjct: 374  KVMDKNPSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRG 433

Query: 1427 ASFAGLRTTSVRKLLPESWGFMCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLE 1248
            ASFAGLRTTSVRKLLPE+WGF+CPVHTPDGEPCGLLNHM S+CRITSY+DS G  +DF +
Sbjct: 434  ASFAGLRTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFK 493

Query: 1247 IRKSILKVLVSIGMTXXXXXXXXXXXPEVLPVLLDGRVVGSIPFDIIEKAVSHMRRLKVS 1068
            IR SIL VL+ IGMT           PEVL V+LDGRVVGSIP   +E AV+H+RRLKVS
Sbjct: 494  IRMSILSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVS 553

Query: 1067 DTSAIPEDLEVGYVPLSMGGAYPGLYLFTSACRFVRPVRNITIPSEESNNIELIGPFEQV 888
              S IP+DLEVGY+PLSMGGAYPGLYLFTS  RFVRPVRNI+IPSEE ++IELIGPFEQV
Sbjct: 554  AISVIPDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQV 613

Query: 887  YMEISCPXXXXXXXXD-----------------VXXXTPWSDHNQSPRNMYQCQMAKQTM 759
            YMEI CP        +                 V   TPWSDHNQSPRNMYQCQM KQTM
Sbjct: 614  YMEIRCPDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTM 673

Query: 758  GFSCQSLSARADQKMYHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYSGYDMEDA 579
             FS Q+++ RADQK+YHLQTPQTPIVRT  Y KY++D+ P GTNAIVAVLAYSGYDMEDA
Sbjct: 674  AFSSQAINCRADQKLYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDA 733

Query: 578  MVLNKSSVERGMCRGYIYQTETIDLSEQKNKSDPSQRSFGRSNLDKTWHHLIDSDGLPFV 399
            M+LNKSSV+RG+C G IYQTETIDLS++ NKSD  QR F RSN+DK+ + LIDSDGLP+V
Sbjct: 734  MILNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYV 793

Query: 398  GQRINPDEPYCSIYNEITSGVSLNKLKGSDHXXXXXXXXXVKNKKHIQKANVRFRHPRNP 219
            GQ INP+EPYCSIYNE+TS     KLKGS+           KNKKH QK N+RFR PRNP
Sbjct: 794  GQMINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAKNKKHPQKVNIRFRRPRNP 853

Query: 218  VIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESIAAK 39
            +IGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFPSRMTIAMLLES+AAK
Sbjct: 854  IIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAK 913

Query: 38   GGALNGNFVDAT 3
            GG+L+G FVDAT
Sbjct: 914  GGSLHGKFVDAT 925


>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score = 1336 bits (3457), Expect = 0.0
 Identities = 666/901 (73%), Positives = 745/901 (82%), Gaps = 17/901 (1%)
 Frame = -1

Query: 2654 IFSPQKERSRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIVREKFCLGQLPIMLK 2475
            + S +   +R M DALYPFECRQAK+SYSGK + D+ FQYG+GV +REKF LGQ PIMLK
Sbjct: 34   LMSVKPRSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLK 93

Query: 2474 SKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGNYPTSMVRNSFRDR 2295
            SKLCHLR A DP+KLV  KEE SEMGGYFILNGLERV+R LILPK NYP SMVRNSFRDR
Sbjct: 94   SKLCHLRGA-DPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDR 152

Query: 2294 REGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLPVGIILKALTETTD 2115
            REGYTDKAV IRCVREDQSAVTVKLYYL NGSARLGFWIQGREYLLPVG++LKAL +TTD
Sbjct: 153  REGYTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTD 212

Query: 2114 HEIYVSLTCCYNDKSDRGKGSVGTQLIGERAKIILDELQDFSLCTRTQCLQHIGEHFQPV 1935
            HEIY SLTCCY++K + GKG+VGTQL+GER KIILDE++D SL TR QCLQHIGEHFQ V
Sbjct: 213  HEIYESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLV 272

Query: 1934 MVGMEKQSYSDVANAVLRDYIFVHLDDNIDKFNLLIVMLQKLFSLVDQTSVPDNPDSLQN 1755
            M G+E +SYS VA+AVLR+YIFVHLD+N DKFNLLI M+QKLFSL+DQTSVPDNPD LQN
Sbjct: 273  MDGLENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQN 332

Query: 1754 QECLLPGHLITIYLKEKLQDWLLRAKRTLQDEVENKTKKFELSSVADVTKVLDKCSPKQI 1575
            QE LLPGHLITIYLKEKLQ+WL +A+R LQDE+ NK K FE SS+A V KV+DK   +QI
Sbjct: 333  QEVLLPGHLITIYLKEKLQEWLYKARRLLQDEI-NKRKNFEFSSLAHVKKVMDKNPSRQI 391

Query: 1574 GAAIENMLKTGRLVTQSGLDQLQRAGMTIMAERLNYLRFISHFRAVHRGASFAGLRTTSV 1395
              A+ENMLKTGRLVTQSGLD  QRAGMT+ AERLN+LRF+SHFRAVHRGASFAGLRTTSV
Sbjct: 392  SLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSV 451

Query: 1394 RKLLPESWGFMCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEIRKSILKVLVS 1215
            RKLLPE+WGF+CPVHTPDGEPCGLLNHM S+CRITSY+DS G  +DF +IR SIL VL+ 
Sbjct: 452  RKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIG 511

Query: 1214 IGMTXXXXXXXXXXXPEVLPVLLDGRVVGSIPFDIIEKAVSHMRRLKVSDTSAIPEDLEV 1035
            IGMT           PEVL V+LDGRVVGSIP   +E AV+H+RRLKVS  S IP+DLEV
Sbjct: 512  IGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEV 571

Query: 1034 GYVPLSMGGAYPGLYLFTSACRFVRPVRNITIPSEESNNIELIGPFEQVYMEISCPXXXX 855
            GY+PLSMGGAYPGLYLFTS  RFVRPVRNI+IPSEE ++IELIGPFEQVYMEI CP    
Sbjct: 572  GYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSD 631

Query: 854  XXXXD-----------------VXXXTPWSDHNQSPRNMYQCQMAKQTMGFSCQSLSARA 726
                +                 V   TPWSDHNQSPRNMYQCQM KQTM FS Q+++ RA
Sbjct: 632  GGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRA 691

Query: 725  DQKMYHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYSGYDMEDAMVLNKSSVERG 546
            DQK+YHLQTPQTPIVRT  Y KY++D+ P GTNAIVAVLAYSGYDMEDAM+LNKSSV+RG
Sbjct: 692  DQKLYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRG 751

Query: 545  MCRGYIYQTETIDLSEQKNKSDPSQRSFGRSNLDKTWHHLIDSDGLPFVGQRINPDEPYC 366
            +C G IYQTETIDLS++ NKSD  QR F RSN+DK+ + LIDSDGLP+VGQ INP+EPYC
Sbjct: 752  LCHGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYC 811

Query: 365  SIYNEITSGVSLNKLKGSDHXXXXXXXXXVKNKKHIQKANVRFRHPRNPVIGDKFSSRHG 186
            SIYNE+TS     KLKGS+           KNKKH QK N+RFR PRNP+IGDKFSSRHG
Sbjct: 812  SIYNEVTSSTRATKLKGSEPVIVDYVALDAKNKKHPQKVNIRFRRPRNPIIGDKFSSRHG 871

Query: 185  QKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALNGNFVDA 6
            QKGVCSQLW D DMPFSG TGMRPDLIINPHAFPSRMTIAMLLES+AAKGG+L+G FVDA
Sbjct: 872  QKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDA 931

Query: 5    T 3
            T
Sbjct: 932  T 932


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
            [Glycine max]
          Length = 1175

 Score = 1291 bits (3340), Expect = 0.0
 Identities = 645/912 (70%), Positives = 734/912 (80%), Gaps = 18/912 (1%)
 Frame = -1

Query: 2684 KLRIWFTNPEIFSPQKER-SRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIVREK 2508
            KLRIW  NP ++ PQKER SR M +AL PFECRQAK+SYSGK  +D+ FQY DG I+RE 
Sbjct: 53   KLRIWLDNPVLYPPQKERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIREN 112

Query: 2507 FCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGNYP 2328
               GQ PIML+SKLC+LR A DP+KLV  KEE SEMGGYFILNGLERV+R LILPK NYP
Sbjct: 113  VNFGQFPIMLQSKLCNLRGA-DPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYP 171

Query: 2327 TSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLPVG 2148
             SMVRNSF DRREGYTDKAV IRCVR DQS+++V+LYYL NGSARLGFW++GREYLLPVG
Sbjct: 172  MSMVRNSFSDRREGYTDKAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVG 231

Query: 2147 IILKALTETTDHEIYVSLTCCYNDKSDRGKGSVGTQLIGERAKIILDELQDFSLCTRTQC 1968
            IILKAL +TTD EIYV+LT CYN+K ++GKG+VGTQL+GERAKIILDEL+D SL TR QC
Sbjct: 232  IILKALIDTTDREIYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQC 291

Query: 1967 LQHIGEHFQPVMVGMEKQSYSDVANAVLRDYIFVHLDDNIDKFNLLIVMLQKLFSLVDQT 1788
            L++IGEHFQPVM  ++  SY  VA+AVL+D I VHLD+N DKFNLLI MLQKLFSL+DQT
Sbjct: 292  LEYIGEHFQPVMNELKNDSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQT 351

Query: 1787 SVPDNPDSLQNQECLLPGHLITIYLKEKLQDWLLRAKRTLQDEVENKTKKFELSSVADVT 1608
            SVPDNPDSLQN E LLPGHLIT+YLKEKL+DWL + +R L DE++ K+KKF+ S +  V 
Sbjct: 352  SVPDNPDSLQNHEVLLPGHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVK 411

Query: 1607 KVLDKCSPKQIGAAIENMLKTGRLVTQSGLDQLQRAGMTIMAERLNYLRFISHFRAVHRG 1428
            KV+DK SPKQ+  A+ENMLKTGRLVTQ+GLD  QRAG T+ AERLN+LRF+SHFRAVHRG
Sbjct: 412  KVMDKNSPKQVSTAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRG 471

Query: 1427 ASFAGLRTTSVRKLLPESWGFMCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLE 1248
            ASFAGLRTT+VRKLLPESWGF+CPVHTPDGEPCGLLNHMT + RITS++DS+G +KD+ +
Sbjct: 472  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFK 531

Query: 1247 IRKSILKVLVSIGMTXXXXXXXXXXXPEVLPVLLDGRVVGSIPFDIIEKAVSHMRRLKVS 1068
            I+ SIL VL+ +GMT           PE L VLLDG VVG I    +EK V+H+R LKVS
Sbjct: 532  IKMSILNVLLEVGMTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVS 591

Query: 1067 DTSAIPEDLEVGYVPLSMGGAYPGLYLFTSACRFVRPVRNITIPSEESNNIELIGPFEQV 888
              + IP+D+EVGYVPLSMGGAYPGLYL TS  RFVRPVRNI+I S+ S NIELIGPFEQV
Sbjct: 592  SVAVIPDDMEVGYVPLSMGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQV 651

Query: 887  YMEISCP-----------------XXXXXXXXDVXXXTPWSDHNQSPRNMYQCQMAKQTM 759
            +MEI CP                          V   TPWSDHNQSPRNMYQCQMAKQTM
Sbjct: 652  FMEIRCPDGGDGGRKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTM 711

Query: 758  GFSCQSLSARADQKMYHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYSGYDMEDA 579
             FS Q++  RADQK+YHLQTPQTPIVRT TY KYNID+ P GTNAIVAVLAY+GYDMEDA
Sbjct: 712  AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDA 771

Query: 578  MVLNKSSVERGMCRGYIYQTETIDLSEQKNKSDPSQRSFGRSNLDKTWHHLIDSDGLPFV 399
            M+LNKSSVERGM  G IYQTETIDL+EQ  +SD S R F +SN++K+    IDSDGLP V
Sbjct: 772  MILNKSSVERGMFHGQIYQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHV 831

Query: 398  GQRINPDEPYCSIYNEITSGVSLNKLKGSDHXXXXXXXXXVKNKKHIQKANVRFRHPRNP 219
            GQ I PDEPYCSIYNE+TS +   K KGS+          VKNKKH+QK N+RFRHPRNP
Sbjct: 832  GQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAADVKNKKHLQKVNIRFRHPRNP 891

Query: 218  VIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESIAAK 39
            VIGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFPSRMTIAMLLES+AAK
Sbjct: 892  VIGDKFSSRHGQKGVCSQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAK 951

Query: 38   GGALNGNFVDAT 3
            GG+L G FVDAT
Sbjct: 952  GGSLRGEFVDAT 963


>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
            gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
            isoform 2 [Theobroma cacao]
          Length = 1180

 Score = 1289 bits (3336), Expect = 0.0
 Identities = 638/915 (69%), Positives = 732/915 (80%), Gaps = 18/915 (1%)
 Frame = -1

Query: 2693 SKLKLRIWFTNPEIFSPQKERS-RNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIV 2517
            S   LRIW  +PE++ PQK+RS +    ALYPFECRQAK+SY+G F +D+ FQ+  GV+V
Sbjct: 57   SNKTLRIWLDHPEVYPPQKDRSSKTSAGALYPFECRQAKISYTGSFHIDVCFQWDGGVVV 116

Query: 2516 REKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKG 2337
            REK   G+ PIMLKSK C+LR A DP+KLV  KEE  EMGGYFILNGLERV+R LILPK 
Sbjct: 117  REKLNFGEFPIMLKSKRCYLREA-DPRKLVACKEESREMGGYFILNGLERVVRLLILPKR 175

Query: 2336 NYPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLL 2157
            NYP S+VRNSFRDRREGYTDKAV IRCVR D S+VTVKLYYL NGSARLGFW+QGREY+L
Sbjct: 176  NYPMSLVRNSFRDRREGYTDKAVVIRCVRGDLSSVTVKLYYLHNGSARLGFWVQGREYML 235

Query: 2156 PVGIILKALTETTDHEIYVSLTCCYNDKSDRGKGSVGTQLIGERAKIILDELQDFSLCTR 1977
            PVGIILKAL +T D EIY  LTCCYN+K+  GKG+VGTQL+GERAKIILDE+Q  +L T+
Sbjct: 236  PVGIILKALIDTNDREIYTKLTCCYNEKNGEGKGAVGTQLVGERAKIILDEVQHLALFTQ 295

Query: 1976 TQCLQHIGEHFQPVMVGMEKQSYSDVANAVLRDYIFVHLDDNIDKFNLLIVMLQKLFSLV 1797
             QCLQHIGEHFQP+M GME +SYS VA+ VLR+YIFVHLDDN DKFNLLI M+QKLFSL+
Sbjct: 296  EQCLQHIGEHFQPIMEGMESESYSTVADVVLRNYIFVHLDDNNDKFNLLIFMVQKLFSLI 355

Query: 1796 DQTSVPDNPDSLQNQECLLPGHLITIYLKEKLQDWLLRAKRTLQDEVENKTKKFELSSVA 1617
            DQTS PDN DSLQNQE LLPGHLITIYLKEKL+DWL + K+ ++D + NK+K F+  S+ 
Sbjct: 356  DQTSAPDNSDSLQNQEVLLPGHLITIYLKEKLEDWLRKGKKLIEDAINNKSKNFDFCSMK 415

Query: 1616 DVTKVLDKCSPKQIGAAIENMLKTGRLVTQSGLDQLQRAGMTIMAERLNYLRFISHFRAV 1437
            DV KV++K  P Q+ AAIEN+LKTGRL+TQ+GLD  QRAG T+ AERLNY RF+S FR V
Sbjct: 416  DVKKVMEKNRPTQVSAAIENLLKTGRLITQTGLDLQQRAGFTVQAERLNYHRFLSFFRCV 475

Query: 1436 HRGASFAGLRTTSVRKLLPESWGFMCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKD 1257
            HRGASFAGLRTTSVRKLLPESWGF+CPVHTPDGEPCGLLNHMT +CRITSYY+S G ++D
Sbjct: 476  HRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYYNSPGNIRD 535

Query: 1256 FLEIRKSILKVLVSIGMTXXXXXXXXXXXPEVLPVLLDGRVVGSIPFDIIEKAVSHMRRL 1077
            F +IR SIL VLV +GMT           P+VLPVLLDGRVVGS+P    EK V+H+RRL
Sbjct: 536  FFKIRMSILDVLVGVGMTTSWPKVDHAGPPQVLPVLLDGRVVGSLPSGEAEKVVAHLRRL 595

Query: 1076 KVSDTSAIPEDLEVGYVPLSMGGAYPGLYLFTSACRFVRPVRNITIPSEESNNIELIGPF 897
            K++  S IP+DLEVGYVPLS+GG YPGLYLFTS  RFVRPVRNI+IPS +  +IELIGPF
Sbjct: 596  KLAAASVIPDDLEVGYVPLSLGGTYPGLYLFTSPSRFVRPVRNISIPSADGKDIELIGPF 655

Query: 896  EQVYMEISCP-----------------XXXXXXXXDVXXXTPWSDHNQSPRNMYQCQMAK 768
            EQV+MEI CP                          V   TPWSDHNQSPRNMYQCQMAK
Sbjct: 656  EQVFMEIRCPDGGNGGRSNIFPATHEEISPTAMLSVVANLTPWSDHNQSPRNMYQCQMAK 715

Query: 767  QTMGFSCQSLSARADQKMYHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYSGYDM 588
            QTM FS Q+++ARADQK+YHLQTPQTPIVRTKTY KY +D+ P GTNAIVAVLAY+GYDM
Sbjct: 716  QTMAFSLQAINARADQKLYHLQTPQTPIVRTKTYTKYCMDEYPSGTNAIVAVLAYTGYDM 775

Query: 587  EDAMVLNKSSVERGMCRGYIYQTETIDLSEQKNKSDPSQRSFGRSNLDKTWHHLIDSDGL 408
            EDAM+LNKSSVERGMC G IYQTETIDL + K+KSD  QR F R + D++    +DSDGL
Sbjct: 776  EDAMILNKSSVERGMCHGQIYQTETIDLGDDKSKSDRGQRIFKREHSDRSISSCLDSDGL 835

Query: 407  PFVGQRINPDEPYCSIYNEITSGVSLNKLKGSDHXXXXXXXXXVKNKKHIQKANVRFRHP 228
            P VGQ I P+EPYCS  N++T+   L   KGS+           K+KKH+QKAN+RFRHP
Sbjct: 836  PHVGQVIRPNEPYCSTINQVTNSKRLYNHKGSETVIVDYVAVDTKSKKHLQKANIRFRHP 895

Query: 227  RNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESI 48
            RNPVIGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFPSRMTIAMLLES+
Sbjct: 896  RNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESV 955

Query: 47   AAKGGALNGNFVDAT 3
            AAKGG+L+G FVDAT
Sbjct: 956  AAKGGSLHGKFVDAT 970


>gb|EYU27090.1| hypothetical protein MIMGU_mgv1a0004241mg, partial [Mimulus guttatus]
          Length = 1028

 Score = 1288 bits (3332), Expect = 0.0
 Identities = 642/814 (78%), Positives = 705/814 (86%), Gaps = 17/814 (2%)
 Frame = -1

Query: 2393 YFILNGLERVIRSLILPKGNYPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYY 2214
            YFILNGLERV+R LILPK NYPTS+VRNSFR+RREGYTDKAV IRCVREDQSAVTVKLYY
Sbjct: 1    YFILNGLERVVRLLILPKRNYPTSVVRNSFRERREGYTDKAVVIRCVREDQSAVTVKLYY 60

Query: 2213 LINGSARLGFWIQGREYLLPVGIILKALTETTDHEIYVSLTCCYNDKSDRGKGSVGTQLI 2034
            L NGSARLG WIQGREYLLPVGIILKALTETTDHEIYVSLTCCYN+K DR KGSVGTQL+
Sbjct: 61   LNNGSARLGLWIQGREYLLPVGIILKALTETTDHEIYVSLTCCYNEKYDRVKGSVGTQLV 120

Query: 2033 GERAKIILDELQDFSLCTRTQCLQHIGEHFQPVMVGMEKQSYSDVANAVLRDYIFVHLDD 1854
            GERAKIILDELQ+ SL TR QCLQHIGEHFQP+MVG+EK+ YS +A+AVLRDY+FVHLD+
Sbjct: 121  GERAKIILDELQNLSLYTRAQCLQHIGEHFQPLMVGLEKEGYSVIADAVLRDYVFVHLDE 180

Query: 1853 NIDKFNLLIVMLQKLFSLVDQTSVPDNPDSLQNQECLLPGHLITIYLKEKLQDWLLRAKR 1674
            NIDKFNLLI MLQKLFSLVDQTSVPDN DSLQN E LLPGHLITIY+KEKLQD+LL+AK+
Sbjct: 181  NIDKFNLLIFMLQKLFSLVDQTSVPDNTDSLQNHEVLLPGHLITIYVKEKLQDFLLKAKQ 240

Query: 1673 TLQDEVENKTKKFELSSVADVTKVLDKCSPKQIGAAIENMLKTGRLVTQSGLDQLQRAGM 1494
             LQD V+NK K FE+SS+ADV KV+DK  PKQIGAAIEN+LKTG LVT++GLD  Q++GM
Sbjct: 241  ALQDVVDNKKKNFEMSSLADVKKVIDKAFPKQIGAAIENLLKTGNLVTKTGLDLPQKSGM 300

Query: 1493 TIMAERLNYLRFISHFRAVHRGASFAGLRTTSVRKLLPESWGFMCPVHTPDGEPCGLLNH 1314
            T++AERLN+LRFISHFRAVHRG+ FAGLRTTSVRKLLPESWGF+CPVHTPDGEPCGLLNH
Sbjct: 301  TVLAERLNFLRFISHFRAVHRGSLFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNH 360

Query: 1313 MTSSCRITSYYDSEGKVKDFLEIRKSILKVLVSIGMTXXXXXXXXXXXPEVLPVLLDGRV 1134
            MTSSCRITS+YDSEG+VKDFLEIRKSI +VLVSIGM            PEVLP+LLDGRV
Sbjct: 361  MTSSCRITSHYDSEGQVKDFLEIRKSISRVLVSIGMIPSLPKLVQAGPPEVLPILLDGRV 420

Query: 1133 VGSIPFDIIEKAVSHMRRLKVSDTSAIPEDLEVGYVPLSMGGAYPGLYLFTSACRFVRPV 954
            VGSI  DI+ KAV+H+RRLKVS TSAIPEDLEVGY+PLSMGGAYPGLYLFTSA RFVRPV
Sbjct: 421  VGSIASDIVGKAVTHLRRLKVSATSAIPEDLEVGYIPLSMGGAYPGLYLFTSASRFVRPV 480

Query: 953  RNITIPSEESNNIELIGPFEQVYMEISCP-----------------XXXXXXXXDVXXXT 825
            RN  IP  ESNNIE IGPFEQVYMEISCP                          V   T
Sbjct: 481  RNRLIPPGESNNIEHIGPFEQVYMEISCPDGGDGGRKNVFPATHEEIHPTGILSVVGNLT 540

Query: 824  PWSDHNQSPRNMYQCQMAKQTMGFSCQSLSARADQKMYHLQTPQTPIVRTKTYEKYNIDD 645
            PWSDHNQSPRNMYQCQM KQTMGFSCQ+++ RADQK+YHLQTPQTPIVRTKTYEKYNIDD
Sbjct: 541  PWSDHNQSPRNMYQCQMGKQTMGFSCQAINCRADQKLYHLQTPQTPIVRTKTYEKYNIDD 600

Query: 644  CPLGTNAIVAVLAYSGYDMEDAMVLNKSSVERGMCRGYIYQTETIDLSEQKNKSDPSQRS 465
             PLGTNAIVAVLAYSGYDMEDAMVLNKSSV+RGMCRGYIYQTE IDL+E+ +KSD SQ++
Sbjct: 601  YPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMCRGYIYQTENIDLTEKGSKSDRSQQT 660

Query: 464  FGRSNLDKTWHHLIDSDGLPFVGQRINPDEPYCSIYNEITSGVSLNKLKGSDHXXXXXXX 285
            FGRSNLDK+ HHLIDSDGLP+ GQRI P +PYCS+YN +TS V+ +KLKGSDH       
Sbjct: 661  FGRSNLDKSSHHLIDSDGLPYAGQRIKPGDPYCSVYNGVTSRVTTSKLKGSDHAYIDYVA 720

Query: 284  XXVKNKKHIQKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLI 105
              VK K  +QKAN+RFR+PRNPVIGDKFSSRHGQKGVCSQLW D DMPFSG +GMRPDLI
Sbjct: 721  VDVKTKTRMQKANIRFRYPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVSGMRPDLI 780

Query: 104  INPHAFPSRMTIAMLLESIAAKGGALNGNFVDAT 3
            INPHAFPSRMTI MLLES+AAKGGA++G FVDAT
Sbjct: 781  INPHAFPSRMTIGMLLESMAAKGGAMDGKFVDAT 814


>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Glycine max]
          Length = 1175

 Score = 1285 bits (3325), Expect = 0.0
 Identities = 643/912 (70%), Positives = 730/912 (80%), Gaps = 18/912 (1%)
 Frame = -1

Query: 2684 KLRIWFTNPEIFSPQKER-SRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIVREK 2508
            KLRIW  NP ++ PQKER SR M +AL PFECRQAK+SY+GK  +D+ FQY DG I+RE 
Sbjct: 53   KLRIWLDNPVLYPPQKERISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPIIREN 112

Query: 2507 FCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGNYP 2328
               GQ PIML+SKLC+LR A DP+KLV  +EE SEMGGYFILNGLERVIR LILPK N+P
Sbjct: 113  INFGQFPIMLQSKLCNLRGA-DPQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHP 171

Query: 2327 TSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLPVG 2148
             SMVRNSF DRREGYTDKA+ IRCVR DQS+++V+LYYL NGSARLGFW++GREYLLPVG
Sbjct: 172  MSMVRNSFSDRREGYTDKAIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVG 231

Query: 2147 IILKALTETTDHEIYVSLTCCYNDKSDRGKGSVGTQLIGERAKIILDELQDFSLCTRTQC 1968
            IILKAL +TTD EIYV+LT CYN+K ++GKG+VGTQL+GERAKIILDEL+D SL TR QC
Sbjct: 232  IILKALIDTTDREIYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQC 291

Query: 1967 LQHIGEHFQPVMVGMEKQSYSDVANAVLRDYIFVHLDDNIDKFNLLIVMLQKLFSLVDQT 1788
            L++IGEHFQPV+  ++  SY  VA AVL+D I VHLD+N DKFNLLI MLQKLFSL+DQT
Sbjct: 292  LEYIGEHFQPVITELKNDSYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQT 351

Query: 1787 SVPDNPDSLQNQECLLPGHLITIYLKEKLQDWLLRAKRTLQDEVENKTKKFELSSVADVT 1608
            SVPDNPDSLQN E LLPGHLIT+YLKEKL+DWL + KR L DE++ K+KKF+ S +  V 
Sbjct: 352  SVPDNPDSLQNHEVLLPGHLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVK 411

Query: 1607 KVLDKCSPKQIGAAIENMLKTGRLVTQSGLDQLQRAGMTIMAERLNYLRFISHFRAVHRG 1428
            KV+DK SPKQ+  A+ENMLKTGRLVTQ+GLD  QRAG T+ AERLN+LRF+SHFRAVHRG
Sbjct: 412  KVMDKNSPKQVSTAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRG 471

Query: 1427 ASFAGLRTTSVRKLLPESWGFMCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLE 1248
            ASFAGLRTT+VRKLLPESWGF+CPVHTPDGEPCGLLNHMT + RITS++DS+G VKD+ +
Sbjct: 472  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFK 531

Query: 1247 IRKSILKVLVSIGMTXXXXXXXXXXXPEVLPVLLDGRVVGSIPFDIIEKAVSHMRRLKVS 1068
            I+ SIL VL+ +GMT           PE L VLLDG VVG I     EK V+H+R LKVS
Sbjct: 532  IKMSILNVLLEVGMTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVS 591

Query: 1067 DTSAIPEDLEVGYVPLSMGGAYPGLYLFTSACRFVRPVRNITIPSEESNNIELIGPFEQV 888
              + IP+D+EVGYVPLSMGGAYPGLYL TS  RFVRPVRNI+IPS  S NIE IGPFEQV
Sbjct: 592  SAAVIPDDMEVGYVPLSMGGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQV 651

Query: 887  YMEISCP-----------------XXXXXXXXDVXXXTPWSDHNQSPRNMYQCQMAKQTM 759
            +MEI CP                          V   TPWSDHNQSPRNMYQCQMAKQTM
Sbjct: 652  FMEIRCPDGGDGGRKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTM 711

Query: 758  GFSCQSLSARADQKMYHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYSGYDMEDA 579
             FS Q++  RADQK+YHLQTPQTPIVRT TY KYNID+ P GTNAIVAVLAY+GYDMEDA
Sbjct: 712  AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDA 771

Query: 578  MVLNKSSVERGMCRGYIYQTETIDLSEQKNKSDPSQRSFGRSNLDKTWHHLIDSDGLPFV 399
            M+LNKSSVERGM  G IYQTETIDL+EQ  + D S R F +SNL+K+    IDSDGLP V
Sbjct: 772  MILNKSSVERGMFHGQIYQTETIDLTEQGGRLDRSSRMFRKSNLEKSACPSIDSDGLPHV 831

Query: 398  GQRINPDEPYCSIYNEITSGVSLNKLKGSDHXXXXXXXXXVKNKKHIQKANVRFRHPRNP 219
            GQ I PDEPYCSIYNE+TS +   K KGS+          VKNKKH+QK N+RFRHPRNP
Sbjct: 832  GQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAVDVKNKKHLQKVNIRFRHPRNP 891

Query: 218  VIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESIAAK 39
            VIGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFPSRMTIAMLLES+AAK
Sbjct: 892  VIGDKFSSRHGQKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAK 951

Query: 38   GGALNGNFVDAT 3
            GG+L G FVDAT
Sbjct: 952  GGSLRGEFVDAT 963


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score = 1280 bits (3313), Expect = 0.0
 Identities = 629/912 (68%), Positives = 734/912 (80%), Gaps = 18/912 (1%)
 Frame = -1

Query: 2684 KLRIWFTNPEIFSPQKERS-RNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIVREK 2508
            KLRIW   PE++ PQKER+ R + +AL P+ECRQAK+SY+GKFM D+ FQY +  ++REK
Sbjct: 53   KLRIWLGKPELYPPQKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREK 112

Query: 2507 FCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGNYP 2328
            F  GQ PIMLKSKLCHLR   DPKKLV   EE SEMGGYF++NGLERV+R LI PK NYP
Sbjct: 113  FNFGQFPIMLKSKLCHLRGL-DPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYP 171

Query: 2327 TSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLPVG 2148
            TSMVRNSF DRREGYTDKAV IRCVREDQS+VTVKLYYL NGSARLGFW+QG+EYLLP+G
Sbjct: 172  TSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIG 231

Query: 2147 IILKALTETTDHEIYVSLTCCYNDKSDRGKGSVGTQLIGERAKIILDELQDFSLCTRTQC 1968
            ++LKAL +TTDHEIY SLT CY+DK  + KG+VGTQL+GERAKIILDE++D +L    QC
Sbjct: 232  VVLKALIDTTDHEIYASLTSCYSDKHGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQC 291

Query: 1967 LQHIGEHFQPVMVGMEKQSYSDVANAVLRDYIFVHLDDNIDKFNLLIVMLQKLFSLVDQT 1788
            L HIG+HFQPVM G+ K+ +S VA+AVL+DYIFVHLD+N DKFNLLI M QKLFSL+DQT
Sbjct: 292  LDHIGQHFQPVMEGLGKEKFSTVADAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSLIDQT 351

Query: 1787 SVPDNPDSLQNQECLLPGHLITIYLKEKLQDWLLRAKRTLQDEVENKTKKFELSSVADVT 1608
            SVPDNPDSLQNQ+ LLPG LIT+YLKEKL+DWL + K+ L+DE+ N +K FE  S+A V 
Sbjct: 352  SVPDNPDSLQNQDVLLPGQLITLYLKEKLEDWLQKVKKLLEDEISNPSKNFEFCSLAHVK 411

Query: 1607 KVLDKCSPKQIGAAIENMLKTGRLVTQSGLDQLQRAGMTIMAERLNYLRFISHFRAVHRG 1428
            KV+DK   KQ+ +A+ENMLKTGRLVTQ+GLD  QRAG T+ AERLN+LRF+SHFRAVHRG
Sbjct: 412  KVMDKNPSKQVSSAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG 471

Query: 1427 ASFAGLRTTSVRKLLPESWGFMCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLE 1248
            ASFAGLRTT+VRKLLPESWGF+CPVHTPDGEPCGLLNH+TS+CRITS+++S+GKV+DF +
Sbjct: 472  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSHFNSQGKVRDFYK 531

Query: 1247 IRKSILKVLVSIGMTXXXXXXXXXXXPEVLPVLLDGRVVGSIPFDIIEKAVSHMRRLKVS 1068
            IR SIL VL+++GM            P+ L VLLDGR+VG I  + +EK V+H+RRLKV 
Sbjct: 532  IRTSILSVLIAVGMIPSLPKLVQMGLPDFLNVLLDGRIVGYISSNEVEKIVAHLRRLKVL 591

Query: 1067 DTSAIPEDLEVGYVPLSMGGAYPGLYLFTSACRFVRPVRNITIPSEESNNIELIGPFEQV 888
                IP+DLEVGYVPLS+ GAYPGLYLFTS  RFVRPV+N++I  E+++NIELIGPFEQV
Sbjct: 592  SPHVIPDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQV 651

Query: 887  YMEISCP-----------------XXXXXXXXDVXXXTPWSDHNQSPRNMYQCQMAKQTM 759
            +MEI CP                          V   TPWSDHNQSPRNMYQCQMAKQTM
Sbjct: 652  FMEIRCPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTM 711

Query: 758  GFSCQSLSARADQKMYHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYSGYDMEDA 579
             FS Q++  RADQK+YHLQTPQTPIVRT TY KYNID+ P GTNAIVAVLAY+GYDMEDA
Sbjct: 712  AFSLQAIRYRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDA 771

Query: 578  MVLNKSSVERGMCRGYIYQTETIDLSEQKNKSDPSQRSFGRSNLDKTWHHLIDSDGLPFV 399
            M+LNKSSVERGM  G IYQTETIDLS+Q N+S  SQ+ F RSN+D +   +ID+DGLP+V
Sbjct: 772  MILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYV 831

Query: 398  GQRINPDEPYCSIYNEITSGVSLNKLKGSDHXXXXXXXXXVKNKKHIQKANVRFRHPRNP 219
            GQ I PDEPYCSIY+E+       KLKGS+          VKNK + QK N+RFR PRNP
Sbjct: 832  GQMIQPDEPYCSIYDEVAGTTRTMKLKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNP 891

Query: 218  VIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESIAAK 39
            +IGDKFSSRHGQKGVCSQLW D DMPF GATGMRPDLIINPHAFPSRMTIAML+ES+AAK
Sbjct: 892  MIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAK 951

Query: 38   GGALNGNFVDAT 3
            GG LNG FV+AT
Sbjct: 952  GGCLNGEFVNAT 963


>ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
            gi|561006696|gb|ESW05690.1| hypothetical protein
            PHAVU_011G201300g [Phaseolus vulgaris]
          Length = 1180

 Score = 1276 bits (3302), Expect = 0.0
 Identities = 635/912 (69%), Positives = 732/912 (80%), Gaps = 18/912 (1%)
 Frame = -1

Query: 2684 KLRIWFTNPEIFSPQKER-SRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIVREK 2508
            KLRIW  NP ++ PQKER S+ M +AL PFECRQAK+SY+GK  +D+ FQY DG ++RE 
Sbjct: 53   KLRIWLENPVVYPPQKERISKTMREALLPFECRQAKISYAGKITIDVCFQYNDGPVIREN 112

Query: 2507 FCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGNYP 2328
               GQ PIML+SKLC+LR A DPKKLV  KEE SEMGGYFILNGLERVIR LILPK NYP
Sbjct: 113  VNFGQFPIMLQSKLCNLRGA-DPKKLVSCKEEASEMGGYFILNGLERVIRLLILPKRNYP 171

Query: 2327 TSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLPVG 2148
             SMVR+SF DRREGYTDKAV IRCVR DQS+++++LYYL NGSARLGFW++GREYLLPVG
Sbjct: 172  MSMVRSSFCDRREGYTDKAVVIRCVRADQSSLSIRLYYLRNGSARLGFWLRGREYLLPVG 231

Query: 2147 IILKALTETTDHEIYVSLTCCYNDKSDRGKGSVGTQLIGERAKIILDELQDFSLCTRTQC 1968
            I+LKAL +TTD EIYV+LT CYN+K  +GKG+VGTQL+GERAKIILDEL+D SL TR QC
Sbjct: 232  IVLKALIDTTDREIYVNLTSCYNEKYAKGKGAVGTQLVGERAKIILDELRDLSLFTRRQC 291

Query: 1967 LQHIGEHFQPVMVGMEKQSYSDVANAVLRDYIFVHLDDNIDKFNLLIVMLQKLFSLVDQT 1788
            L++IGEHFQP+M  + K SY+ VA+AVL+D I VHLD++ DKFNLLI MLQKLFSL+DQT
Sbjct: 292  LEYIGEHFQPIMPELMKDSYAIVADAVLKDCILVHLDNDFDKFNLLIFMLQKLFSLIDQT 351

Query: 1787 SVPDNPDSLQNQECLLPGHLITIYLKEKLQDWLLRAKRTLQDEVENKTKKFELSSVADVT 1608
            SVPDNPDSLQN E LLPGHLI++Y+KEKL+DWL + K+ L DE++ K+ KF+ S +A V 
Sbjct: 352  SVPDNPDSLQNHEVLLPGHLISLYIKEKLEDWLQKGKKLLMDEIQKKSNKFDFSDIAQVK 411

Query: 1607 KVLDKCSPKQIGAAIENMLKTGRLVTQSGLDQLQRAGMTIMAERLNYLRFISHFRAVHRG 1428
            K++DK S K + A++EN+LKTGRLVTQ+GLD  QRAG T+ AERLN+LRF+SHFRAVHRG
Sbjct: 412  KIMDKNSAKLVSASVENLLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFMSHFRAVHRG 471

Query: 1427 ASFAGLRTTSVRKLLPESWGFMCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLE 1248
            ASFAGLRTT+VRKLLPESWGF+CPVHTPDGEPCGLLNHMT +CRITS++DS+G +KD+ +
Sbjct: 472  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTCRITSFFDSQGNIKDYFK 531

Query: 1247 IRKSILKVLVSIGMTXXXXXXXXXXXPEVLPVLLDGRVVGSIPFDIIEKAVSHMRRLKVS 1068
            I+KSI  +L+ +GMT           PE L VLLDG VVG I    +EK V+++R LKVS
Sbjct: 532  IQKSIRDILMEVGMTSSLPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAYIRELKVS 591

Query: 1067 DTSAIPEDLEVGYVPLSMGGAYPGLYLFTSACRFVRPVRNITIPSEESNNIELIGPFEQV 888
              S IP D+EVGYVPLSMGGAYPGLYLFTS  RFVRPV+NI+IPS  S +IELIGPFEQV
Sbjct: 592  SASVIPGDMEVGYVPLSMGGAYPGLYLFTSPSRFVRPVKNISIPSNGSESIELIGPFEQV 651

Query: 887  YMEISC-----------------PXXXXXXXXDVXXXTPWSDHNQSPRNMYQCQMAKQTM 759
            +MEI C                           V   TPWSDHNQSPRNMYQCQMAKQTM
Sbjct: 652  FMEIRCLDGGDGGRKSSFPATHEEIHPTEMLSVVANLTPWSDHNQSPRNMYQCQMAKQTM 711

Query: 758  GFSCQSLSARADQKMYHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYSGYDMEDA 579
             FS Q++  RADQK+YHLQTPQTPIVRT TY KYNID+ P GTNAIVAVLAY+GYDMEDA
Sbjct: 712  AFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDA 771

Query: 578  MVLNKSSVERGMCRGYIYQTETIDLSEQKNKSDPSQRSFGRSNLDKTWHHLIDSDGLPFV 399
            M+LNKSSVERGM  G IYQTETIDL+EQ+ KSD S R F +SN++K     IDSDGLP V
Sbjct: 772  MILNKSSVERGMFHGQIYQTETIDLTEQRGKSDRSSRIFRKSNVEKLGCPSIDSDGLPHV 831

Query: 398  GQRINPDEPYCSIYNEITSGVSLNKLKGSDHXXXXXXXXXVKNKKHIQKANVRFRHPRNP 219
            GQ I PDEPYCSIYNE+TS     K KGS+          VKNKKHIQK N+RFRHPRNP
Sbjct: 832  GQMIRPDEPYCSIYNEVTSSTQTYKRKGSEAVYVDYVAVDVKNKKHIQKVNIRFRHPRNP 891

Query: 218  VIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESIAAK 39
            VIGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFPSRMTIAMLLES+AAK
Sbjct: 892  VIGDKFSSRHGQKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAK 951

Query: 38   GGALNGNFVDAT 3
            GG+L G FVDAT
Sbjct: 952  GGSLRGEFVDAT 963


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score = 1265 bits (3273), Expect = 0.0
 Identities = 635/901 (70%), Positives = 726/901 (80%), Gaps = 23/901 (2%)
 Frame = -1

Query: 2636 ERSRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIVREKFCLGQLPIMLKSKLCHL 2457
            E SR     L PFECRQAK+SY+GKF  D+ F+Y    ++REK+  GQLPIMLKS+LCHL
Sbjct: 50   ESSRTKHKRLLPFECRQAKISYTGKFEADVCFEYHGKAVIREKYNFGQLPIMLKSRLCHL 109

Query: 2456 RAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGNYPTSMVRNSFRDRREGYTD 2277
                D ++LV   EE +EMGGYFILNGLERV+R LI+PK NYP S VR SFRDRREGYTD
Sbjct: 110  YGV-DSQQLVSFNEESAEMGGYFILNGLERVVRLLIMPKRNYPMSTVRGSFRDRREGYTD 168

Query: 2276 KAVTIRCVRE------DQSAVTVKLYYLINGSARLGFWIQGREYLLPVGIILKALTETTD 2115
            KAV IRCVRE      DQS+V+VKLYYL +GSARLGFWIQGREYLLP GI+LKAL ETTD
Sbjct: 169  KAVVIRCVREYQSSLTDQSSVSVKLYYLRSGSARLGFWIQGREYLLPAGIVLKALAETTD 228

Query: 2114 HEIYVSLTCCYNDKSDRGKGSVGTQLIGERAKIILDELQDFSLCTRTQCLQHIGEHFQPV 1935
             EIY  LTCCY++K ++ KG+VG+QL+GERAKIILDE++D SL T+++CL+HIGEHFQPV
Sbjct: 229  REIYEKLTCCYDEKYEKAKGAVGSQLVGERAKIILDEVRDLSLFTQSECLRHIGEHFQPV 288

Query: 1934 MVGMEKQSYSDVANAVLRDYIFVHLDDNIDKFNLLIVMLQKLFSLVDQTSVPDNPDSLQN 1755
            M G+EK+++S+VA+AVL+DYIFVHL++  DKFNLLI MLQKLFSLVDQTSV DNPDSLQN
Sbjct: 289  MDGLEKETFSNVAHAVLKDYIFVHLNNYDDKFNLLIFMLQKLFSLVDQTSVVDNPDSLQN 348

Query: 1754 QECLLPGHLITIYLKEKLQDWLLRAKRTLQDEVENKTKKFELSSVADVTKVLDKCSPKQI 1575
            QE LLPGHL+TIYLKEKL++WL +AK+ LQ+E+  K   F   SV DV KV+DK     I
Sbjct: 349  QEVLLPGHLVTIYLKEKLEEWLRKAKKVLQEEIA-KNNNFNFLSVLDVKKVIDKNPSTTI 407

Query: 1574 GAAIENMLKTGRLVTQSGLDQLQRAGMTIMAERLNYLRFISHFRAVHRGASFAGLRTTSV 1395
              A+ENMLKTGRLVTQ+GLD  QRAG T+ AERLN+LRF+S FRAVHRGASFAGLRTTSV
Sbjct: 408  SLAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTSV 467

Query: 1394 RKLLPESWGFMCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEIRKSILKVLVS 1215
            RKLLPESWGF+CPVHTPDGEPCGLLNHMT SCRITSY+DS+G VKDF +IRKSIL VL S
Sbjct: 468  RKLLPESWGFLCPVHTPDGEPCGLLNHMTRSCRITSYFDSQGAVKDFFDIRKSILGVLTS 527

Query: 1214 IGMTXXXXXXXXXXXPEVLPVLLDGRVVGSIPFDIIEKAVSHMRRLKVSDTSAIPEDLEV 1035
            +GMT           P+VL VLLDGRVVGSIP   +EK V H+RRLKV+ +S IP+DLEV
Sbjct: 528  LGMTSSLPKLVQAGPPQVLSVLLDGRVVGSIPSSQVEKVVVHLRRLKVAASSVIPDDLEV 587

Query: 1034 GYVPLSMGGAYPGLYLFTSACRFVRPVRNITIPSEESNNIELIGPFEQVYMEISCPXXXX 855
            GYVPLSMGGA+PGLYLFTS  RF+RPV+NI+IP+ E  NIELIGPFEQV+MEI CP    
Sbjct: 588  GYVPLSMGGAFPGLYLFTSPSRFIRPVKNISIPAGEGENIELIGPFEQVFMEIRCPDGGN 647

Query: 854  XXXXD-----------------VXXXTPWSDHNQSPRNMYQCQMAKQTMGFSCQSLSARA 726
                D                 V   TPWSDHNQSPRNMYQCQMAKQTM FS QSL  RA
Sbjct: 648  GGRSDAFPATHEEIHPTDMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQSLRFRA 707

Query: 725  DQKMYHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYSGYDMEDAMVLNKSSVERG 546
            DQK+YHLQTPQTPIVRT +Y KY +D+ P GTNAIVAVLAY+GYDMEDAM+LNKSSVERG
Sbjct: 708  DQKLYHLQTPQTPIVRTSSYTKYCVDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERG 767

Query: 545  MCRGYIYQTETIDLSEQKNKSDPSQRSFGRSNLDKTWHHLIDSDGLPFVGQRINPDEPYC 366
            MC G IYQTETIDLSE+ ++SD +QR F RSN+DK+ H +IDSDGLP+VGQ I+P+EPYC
Sbjct: 768  MCHGQIYQTETIDLSEEGSRSDRAQRMFRRSNIDKSLHSVIDSDGLPYVGQMIHPNEPYC 827

Query: 365  SIYNEITSGVSLNKLKGSDHXXXXXXXXXVKNKKHIQKANVRFRHPRNPVIGDKFSSRHG 186
            SIYNEIT+    N  KGSD           KNKKH+QK N+RFRHPRNP+IGDKFSSRHG
Sbjct: 828  SIYNEITNTTRTNNRKGSDPVIVDYVAIDTKNKKHLQKVNIRFRHPRNPIIGDKFSSRHG 887

Query: 185  QKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALNGNFVDA 6
            QKGVCSQLW D DMPFSG TGMRPDLIINPHAFPSRMTIAMLLES+AAKGG+LNG FVDA
Sbjct: 888  QKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESLAAKGGSLNGKFVDA 947

Query: 5    T 3
            T
Sbjct: 948  T 948


>gb|EPS62433.1| hypothetical protein M569_12357, partial [Genlisea aurea]
          Length = 1144

 Score = 1259 bits (3259), Expect = 0.0
 Identities = 636/897 (70%), Positives = 729/897 (81%), Gaps = 24/897 (2%)
 Frame = -1

Query: 2621 MGDALYPFECRQAKLSYSGKFMVDMNFQYGDG------VIVREKFCLGQLPIMLKSKLCH 2460
            M + + P ECRQAKLSYSGKF +D+ FQY DG        +RE    GQ PIMLKSKLCH
Sbjct: 38   MVEKIQPVECRQAKLSYSGKFTLDVIFQYDDGGSNQNHFSIRENMSFGQFPIMLKSKLCH 97

Query: 2459 LRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGNYPTSMVRNSFRDRREGYT 2280
            LR A+D KKLV L EE SEMGGYFILNGLERV+R +IL K NYP SM R+SFR+RREGYT
Sbjct: 98   LRDADDSKKLVALNEESSEMGGYFILNGLERVVRLVILQKQNYPMSMERSSFRERREGYT 157

Query: 2279 DKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLPVGIILKALTETTDHEIYV 2100
            +KAV IRCVRED S+VTV+LYY+ NGSAR+GFWIQGRE LLP+GI+LKAL ETTD  IY 
Sbjct: 158  EKAVAIRCVREDYSSVTVRLYYIENGSARVGFWIQGREILLPIGIVLKALVETTDKNIYW 217

Query: 2099 SLTCCYNDKSDRGKGSVGTQLIGERAKIILDELQDFSLCTRTQCLQHIGEHFQPVMVGME 1920
             LTCCYN+ +D+ +G+VGTQLIGER ++ILDE+ + SL TR QCLQHIGE F+P M+G+E
Sbjct: 218  RLTCCYNENNDQVRGAVGTQLIGERVQVILDEIHNLSLHTRAQCLQHIGERFRPWMIGLE 277

Query: 1919 KQSYSDVANAVLRDYIFVHLDDNIDKFNLLIVMLQKLFSLVDQTSVPDNPDSLQNQECLL 1740
             +S   VA+AVL+++I VHLDD+ DKFNLLI ML KLFSLVD TS+PDNPD+LQNQE LL
Sbjct: 278  NESDYVVADAVLKNFILVHLDDHKDKFNLLIFMLWKLFSLVDHTSIPDNPDALQNQEVLL 337

Query: 1739 PGHLITIYLKEKLQDWLLRAKRTLQDEVENKTKKFELSSVADVTKVLDKCSPKQIGAAIE 1560
            PGHLIT+YLKEKLQ+WLLR+KR LQDE +NK KKF+LSS+ +V KVL+K SP+QIG AIE
Sbjct: 338  PGHLITVYLKEKLQEWLLRSKRALQDEADNKAKKFDLSSLVNVRKVLEKNSPRQIGQAIE 397

Query: 1559 NMLKTGRLVTQSGLDQLQRAGMTIMAERLNYLRFISHFRAVHRGASFAGLRTTSVRKLLP 1380
             +LKTG L T+S LD  QRAGMT++AERLN+LRF+SHFRAVHRGASFAGLRTTSVRKLLP
Sbjct: 398  MLLKTGALKTKSSLDLPQRAGMTVLAERLNFLRFVSHFRAVHRGASFAGLRTTSVRKLLP 457

Query: 1379 ESWGFMCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEIRKSILKVLVSIGMTX 1200
            ESWGF+CPVHTPDGEPCGLLNHMT SCRITS+YDSEGKVKDFL+IRKS+L+VLVS GM  
Sbjct: 458  ESWGFLCPVHTPDGEPCGLLNHMTVSCRITSHYDSEGKVKDFLKIRKSVLEVLVSSGMEP 517

Query: 1199 XXXXXXXXXXPEVLPVLLDGRVVGSIPFDIIEKAVSHMRRLKVSDTSAIPEDLEVGYVPL 1020
                      PE L VLLDGRVVGSI   ++EK VS++RRLKVS  S IP DLEVG+VP+
Sbjct: 518  SEPKTVLAGPPEYLSVLLDGRVVGSIASGLVEKCVSYLRRLKVSAISGIPNDLEVGHVPV 577

Query: 1019 SMGGAYPGLYLFTSACRFVRPVRNITIPSEESNNIELIGPFEQ-VYMEISCP-------- 867
            S GGAYP LYLFTSA RF+RPV N+TI  EES NIELIGPFEQ VYMEI CP        
Sbjct: 578  SSGGAYPALYLFTSASRFIRPVINLTIHPEESKNIELIGPFEQVVYMEIRCPDGGDSGRN 637

Query: 866  ---------XXXXXXXXDVXXXTPWSDHNQSPRNMYQCQMAKQTMGFSCQSLSARADQKM 714
                              V   TPWSDHNQSPRNMYQCQM KQTMGFSCQ+L +RADQK+
Sbjct: 638  NVCPTTHAEIHPTGILSLVANLTPWSDHNQSPRNMYQCQMGKQTMGFSCQALHSRADQKL 697

Query: 713  YHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYSGYDMEDAMVLNKSSVERGMCRG 534
            YHLQTPQTPIVRT+TYEKY+ID+ PLGTNAIVAVLAY+GYDMEDAM+LNKSSV+RGM RG
Sbjct: 698  YHLQTPQTPIVRTETYEKYDIDEYPLGTNAIVAVLAYTGYDMEDAMILNKSSVDRGMFRG 757

Query: 533  YIYQTETIDLSEQKNKSDPSQRSFGRSNLDKTWHHLIDSDGLPFVGQRINPDEPYCSIYN 354
            YIYQTET+DL++++ KSD + +SF R+NLDK+ +HLIDSDGLP VGQRI P  PYCSIYN
Sbjct: 758  YIYQTETVDLTDKRYKSDGNPKSFRRTNLDKSSNHLIDSDGLPHVGQRITPGSPYCSIYN 817

Query: 353  EITSGVSLNKLKGSDHXXXXXXXXXVKNKKHIQKANVRFRHPRNPVIGDKFSSRHGQKGV 174
            E+TS V+ NKLKGSD          VK +K ++ AN+RFRHPR P+IGDKFSSRHGQKGV
Sbjct: 818  EVTSKVATNKLKGSDAAYVDYVAVDVKPQKSLKIANIRFRHPRFPIIGDKFSSRHGQKGV 877

Query: 173  CSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALNGNFVDAT 3
            CSQLW D DMPFS  TGMRPDLIINPHAFPSRMTIAMLLESI AK GALNG+FV+AT
Sbjct: 878  CSQLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIGAKVGALNGDFVNAT 934


>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Citrus sinensis]
          Length = 1175

 Score = 1257 bits (3252), Expect = 0.0
 Identities = 630/915 (68%), Positives = 732/915 (80%), Gaps = 21/915 (2%)
 Frame = -1

Query: 2684 KLRIWFTNPEIFSPQKER-SRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDG--VIVR 2514
            +L+I   NPEIF PQKE+ S+ + DAL PFECRQAK+SY+GK M D+ FQY D    +VR
Sbjct: 51   RLKISVGNPEIFPPQKEQGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDAGSPVVR 110

Query: 2513 EKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGN 2334
            E+F  GQ P+MLK++ CHL+ A D +KLV LKEE +EMGGYFILNGLERV RS+ILPK N
Sbjct: 111  ERFNFGQFPVMLKTRRCHLQGA-DSQKLVSLKEEAAEMGGYFILNGLERVFRSVILPKQN 169

Query: 2333 YPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLP 2154
            YP SMVR+SFRDRREGYTDKAV IRCVR+DQS+VT+KLYYL+NGS RLGFW+QG+EYLLP
Sbjct: 170  YPMSMVRSSFRDRREGYTDKAVVIRCVRKDQSSVTLKLYYLLNGSVRLGFWLQGKEYLLP 229

Query: 2153 VGIILKALTETTDHEIYVSLTCCYNDKSDRGKGSVGTQLIGERAKIILDELQDFSLCTRT 1974
            VGI+LKAL +T D EI+  LTCCY++K  + KG+VG+ L+ ER KIIL E+QD SL TR 
Sbjct: 230  VGIVLKALVDTNDLEIFNHLTCCYDEKYKKEKGAVGSPLVSERVKIILAEVQDLSLTTRL 289

Query: 1973 QCLQHIGEHFQPVMVGMEKQSYSDVANAVLRDYIFVHLDDNIDKFNLLIVMLQKLFSLVD 1794
            QCLQHIGEHFQPV+ G++ +SY  VA  V+RDYIFVHL+DN DKFNLLI MLQKLFSLVD
Sbjct: 290  QCLQHIGEHFQPVIDGLQSESYYAVAETVIRDYIFVHLNDNNDKFNLLIFMLQKLFSLVD 349

Query: 1793 QTSVPDNPDSLQNQECLLPGHLITIYLKEKLQDWLLRAKRTLQDEVENKTKKFELSSVAD 1614
             TSV DNPDSLQNQE LLPGHLITIYLKEKL+DWL + K+ +QDE+EN  KKF+  ++A+
Sbjct: 350  HTSVSDNPDSLQNQEILLPGHLITIYLKEKLEDWLRKGKKLIQDEIENNGKKFDFFNLAN 409

Query: 1613 VTKVLDKCSPKQIGAAIENMLKTGRLVTQSGLDQLQRAGMTIMAERLNYLRFISHFRAVH 1434
            + KV++K   KQIG +IE MLKTGRL TQ+GLD  QRAG T+ AERLN+LRFIS FRAVH
Sbjct: 410  IKKVMEKNPSKQIGTSIETMLKTGRLATQTGLDLQQRAGYTVQAERLNFLRFISFFRAVH 469

Query: 1433 RGASFAGLRTTSVRKLLPESWGFMCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDF 1254
            RGASFAGLRTTSVRKLLPESWGF+CPVHTPDGEPCGLLNHMTS+CR+ SYYDS G ++DF
Sbjct: 470  RGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVASYYDSRGNIRDF 529

Query: 1253 LEIRKSILKVLVSIGMTXXXXXXXXXXXPEVLPVLLDGRVVGSIPFDIIEKAVSHMRRLK 1074
             ++R SIL+VL+ +GM            P VL VLLDGRVVG IP   IEK V+H+RRLK
Sbjct: 530  SKMRTSILRVLIGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLRRLK 589

Query: 1073 VSDTSAIPEDLEVGYVPLSMGGAYPGLYLFTSACRFVRPVRNITIPSEESNNIELIGPFE 894
            VS  S IP+DLEVGYVPLS+GGAYPGLYLFTS  +FVRPVRNI++PSEES NIELIGPFE
Sbjct: 590  VSAASVIPDDLEVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIGPFE 649

Query: 893  QVYMEISCP-----------------XXXXXXXXDVXXXTPWSDHNQSPRNMYQCQMAKQ 765
            QV+MEI CP                          V   TP+SDHNQSPRNMYQCQMAKQ
Sbjct: 650  QVFMEIRCPDGGDGGRRNAFPATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQMAKQ 709

Query: 764  TMGFSCQSLSARADQKMYHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYSGYDME 585
            TMGFS Q+L  RADQK+YHLQTPQTPIVRT TY KY+ID+ P GTNAIVAVLAY+GYDME
Sbjct: 710  TMGFSVQALKFRADQKLYHLQTPQTPIVRTNTYTKYSIDEYPTGTNAIVAVLAYTGYDME 769

Query: 584  DAMVLNKSSVERGMCRGYIYQTETIDLSEQKNKSDPSQRSFGRSNLDKTWHHLIDSDGLP 405
            DAM+LNKSSV+RGMC G IYQTETIDLS+  NK D  Q+ F R+   K+ H +IDSDGLP
Sbjct: 770  DAMILNKSSVDRGMCHGQIYQTETIDLSDDGNKVDRGQKLFRRNKDAKSLHSVIDSDGLP 829

Query: 404  FVGQRINPDEPYCSIYNEITSGVSLNKLKGSDHXXXXXXXXXVKNKKHI-QKANVRFRHP 228
            +VGQ I+P EPYCSIY++ T+    N  KGS+          +KN K++ QKAN+RFRH 
Sbjct: 830  YVGQMIHPGEPYCSIYDKTTNSWRTNSRKGSESVFVDYVAVDMKNSKNLPQKANIRFRHT 889

Query: 227  RNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESI 48
            RNP+IGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFPSRMTIAMLLES+
Sbjct: 890  RNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESV 949

Query: 47   AAKGGALNGNFVDAT 3
            AAKGG+L+G F+DAT
Sbjct: 950  AAKGGSLHGKFMDAT 964


>ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Cicer arietinum]
            gi|502078798|ref|XP_004486058.1| PREDICTED: probable
            DNA-directed RNA polymerase I subunit RPA2-like isoform
            X2 [Cicer arietinum]
          Length = 1177

 Score = 1252 bits (3240), Expect = 0.0
 Identities = 633/914 (69%), Positives = 728/914 (79%), Gaps = 21/914 (2%)
 Frame = -1

Query: 2681 LRIWFTNPEIFSPQKER----SRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIVR 2514
            L+I   NP+IF PQKER    SRN+   LYPFECRQAK+SY+G F  ++ FQY +G IVR
Sbjct: 60   LKISMDNPKIFEPQKERGFSKSRNI---LYPFECRQAKISYTGTFTAELCFQYDNGPIVR 116

Query: 2513 EKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGN 2334
            EKF  GQ PIML+SKLC+LR A+ PKKLV  KEE SE+GGYFILNGLERV+R LI+PK N
Sbjct: 117  EKFNFGQFPIMLQSKLCNLRGAS-PKKLVSYKEEASEVGGYFILNGLERVMRLLIMPKRN 175

Query: 2333 YPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLP 2154
            YP S VR+SF +RREGYTDKAV IRCVR DQ++V++KLYYL NGSARLGFWI GREY+LP
Sbjct: 176  YPMSTVRSSFSERREGYTDKAVVIRCVRADQTSVSIKLYYLRNGSARLGFWILGREYMLP 235

Query: 2153 VGIILKALTETTDHEIYVSLTCCYNDKSDRGKGSVGTQLIGERAKIILDELQDFSLCTRT 1974
            VGI+LKAL +TTD EIYV+LT CYN+K ++GKG+VGTQL+GERAKIILDE++D SL TR 
Sbjct: 236  VGIVLKALIDTTDREIYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDEVRDLSLFTRL 295

Query: 1973 QCLQHIGEHFQPVMVGMEKQSYSDVANAVLRDYIFVHLDDNIDKFNLLIVMLQKLFSLVD 1794
            QCLQ+IGEHFQP++ G++ +S+  VA+AVLRDYI VHLD+N DKFNLLI MLQKLFSL+D
Sbjct: 296  QCLQYIGEHFQPILQGLKNESHHIVADAVLRDYILVHLDNNFDKFNLLIFMLQKLFSLID 355

Query: 1793 QTSVPDNPDSLQNQECLLPGHLITIYLKEKLQDWLLRAKRTLQDEVENKTKKFELSSVAD 1614
            QTSVPDNPDSLQNQE LLPGHLIT+YLKEKL++WL + KR L DE+E K   FE   +AD
Sbjct: 356  QTSVPDNPDSLQNQEVLLPGHLITLYLKEKLEEWLQKGKRLLLDEIEKKGATFEFGRIAD 415

Query: 1613 VTKVLDKCSPKQIGAAIENMLKTGRLVTQSGLDQLQRAGMTIMAERLNYLRFISHFRAVH 1434
            V KVL+K   K I  AIENMLKTGRLVT +GLD  QRAG T+ AER+N+LRFISHFRAVH
Sbjct: 416  VKKVLEKNHTKGISTAIENMLKTGRLVTTTGLDLHQRAGYTVQAERINFLRFISHFRAVH 475

Query: 1433 RGASFAGLRTTSVRKLLPESWGFMCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDF 1254
            RG+SFAGLRTT+VRKLLPESWGF+CPVHTPDGEPCGLLNHMT +CR+TS+YDSEG +KD+
Sbjct: 476  RGSSFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTCRVTSFYDSEGNIKDY 535

Query: 1253 LEIRKSILKVLVSIGMTXXXXXXXXXXXPEVLPVLLDGRVVGSIPFDIIEKAVSHMRRLK 1074
             +I+ SIL +LV IGMT           PEVL VLLDG +VG IP   +EK V+H+R LK
Sbjct: 536  FKIKLSILNILVEIGMTQSLPKIFLPGPPEVLTVLLDGCIVGFIPSTEVEKVVAHIRELK 595

Query: 1073 VSDTSAIPEDLEVGYVPLSMGGAYPGLYLFTSACRFVRPVRNITIPSEESNNIELIGPFE 894
            VS  + IP D+EVGYVPLSMGGAYPGLYLFTS  RFVRPVRN++IPS  + N+ELIGPFE
Sbjct: 596  VSSAAVIPNDMEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNLSIPS-TNENVELIGPFE 654

Query: 893  QVYMEISCP-----------------XXXXXXXXDVXXXTPWSDHNQSPRNMYQCQMAKQ 765
            QV+MEI CP                          V   TPWSDHNQSPRNMYQCQMAKQ
Sbjct: 655  QVFMEIRCPDGGDGGRKSPFPATHEEIHPTGMLSVVGNLTPWSDHNQSPRNMYQCQMAKQ 714

Query: 764  TMGFSCQSLSARADQKMYHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYSGYDME 585
            TMGFS Q++  RADQK+YHLQTPQTPIVRT+ Y +Y+ID+ P GTNAIVAVLAY+GYDME
Sbjct: 715  TMGFSSQTIQHRADQKLYHLQTPQTPIVRTRAYSEYSIDEYPSGTNAIVAVLAYTGYDME 774

Query: 584  DAMVLNKSSVERGMCRGYIYQTETIDLSEQKNKSDPSQRSFGRSNLDKTWHHLIDSDGLP 405
            DAM+LNKSSVERGM  G IYQTETIDL+E+  KSD S R F +S LDK     IDSDGLP
Sbjct: 775  DAMILNKSSVERGMFHGQIYQTETIDLTEKGGKSDQSARVFRKSKLDKPCPS-IDSDGLP 833

Query: 404  FVGQRINPDEPYCSIYNEITSGVSLNKLKGSDHXXXXXXXXXVKNKKHIQKANVRFRHPR 225
             VGQ I PDEPYCS YNE+T+   L K KGS+           K KK++ K N+RFRHPR
Sbjct: 834  HVGQMIWPDEPYCSTYNEVTNKTYLFKKKGSEPVYVDYVAVDTKTKKNLNKVNIRFRHPR 893

Query: 224  NPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESIA 45
            NPVIGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFPSRMTIAMLLES+A
Sbjct: 894  NPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVA 953

Query: 44   AKGGALNGNFVDAT 3
            AKGG+L+G F DAT
Sbjct: 954  AKGGSLHGKFKDAT 967


>gb|EXC31692.1| putative DNA-directed RNA polymerase I subunit RPA2 [Morus notabilis]
          Length = 1243

 Score = 1252 bits (3239), Expect = 0.0
 Identities = 635/951 (66%), Positives = 728/951 (76%), Gaps = 66/951 (6%)
 Frame = -1

Query: 2657 EIFSPQKERSRNMGDA--------LYPFECRQAKLSYSGKFMVDMNFQYGDGVIVREKFC 2502
            E+F  Q E   ++ DA        + P +CRQAK+SY+GKFM D  FQY +G ++REKF 
Sbjct: 16   ELFRHQIESFDHLIDAGLETLLLGIKPIQCRQAKISYTGKFMADGCFQYDNGAVIREKFN 75

Query: 2501 LGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGNYPTS 2322
             GQ PIMLKSKLC+L  A DP+KLV  KEE SEMGGYFILNGLERV+R LILPK NYP S
Sbjct: 76   FGQFPIMLKSKLCNLSGA-DPQKLVASKEEDSEMGGYFILNGLERVVRLLILPKRNYPMS 134

Query: 2321 MVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLPVGII 2142
            MVRNSFRDRR+GYTDKAV IRCVREDQS+V+V++YYL NGSARLGFW+ GREYLLPVGI+
Sbjct: 135  MVRNSFRDRRQGYTDKAVGIRCVREDQSSVSVRVYYLRNGSARLGFWVHGREYLLPVGIV 194

Query: 2141 LKALTETTDHEIYVSLTCCYNDKSDRGKGSVGTQLIGERAKIILDELQDFSLCTRTQCLQ 1962
            LKAL +TTD EIY SLTCCY++K  +GKG VGTQL+GERA+IILDE++  SL TR +CL+
Sbjct: 195  LKALVDTTDREIYASLTCCYSEKYGKGKGVVGTQLLGERAQIILDEVRALSLYTRIECLE 254

Query: 1961 HIGEHFQPVMVGMEKQSYSDVANAVLRDYIFVHLDDNIDKFNLLIVMLQKLFSLVDQTSV 1782
            HIGEHFQPVM G E +S+S VA +VL+DYIFVHLD+N DKFNLLI M+QKLFSL+DQTSV
Sbjct: 255  HIGEHFQPVMEGFENKSFSVVAESVLKDYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSV 314

Query: 1781 PDNPDSLQNQECLLPGHLITIYLKEKLQDWLLRAKRTLQDEVENKTKKFELSSVADVTKV 1602
            PDNPDSLQN E LLPGHLI IYLKEKL+DWL +AK+ LQDE+ NK K F+  S+  V KV
Sbjct: 315  PDNPDSLQNHEVLLPGHLIAIYLKEKLEDWLSKAKKLLQDEITNKGKSFDFCSLVQVKKV 374

Query: 1601 LDKCSPKQIGAAIENMLKTGRLVTQSGLDQLQ---------------------------- 1506
            +DK   KQI +A+ENMLKTGRL TQ+GLD  Q                            
Sbjct: 375  MDKNPAKQISSAVENMLKTGRLATQTGLDLQQKGWVDNLVALSKVSLSKKDGCLGVRNLL 434

Query: 1505 -------------RAGMTIMAERLNYLRFISHFRAVHRGASFAGLRTTSVRKLLPESWGF 1365
                         RAG T+ AERLNYLRF+SHFRAVHRG SFAGLRTTSVRKLLPESWGF
Sbjct: 435  KKESGIIVEMVVERAGFTVQAERLNYLRFLSHFRAVHRGTSFAGLRTTSVRKLLPESWGF 494

Query: 1364 MCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEIRKSILKVLVSIGMTXXXXXX 1185
            +CPVHTPDGEPCGLLNH+T +CRITSY+DS+G  KDF +IR SIL VLV +GM+      
Sbjct: 495  LCPVHTPDGEPCGLLNHLTCTCRITSYFDSQGNNKDFFKIRMSILSVLVEVGMSPSLPKL 554

Query: 1184 XXXXXPEVLPVLLDGRVVGSIPFDIIEKAVSHMRRLKVSDTSAIPEDLEVGYVPLSMGGA 1005
                 PEVL VLLDGR+VGSI   +IEK V+H+RRLKVS  S IP+DLEVGYVPLSMGG 
Sbjct: 555  VQAGPPEVLSVLLDGRIVGSISSSVIEKVVAHLRRLKVSPASEIPDDLEVGYVPLSMGGT 614

Query: 1004 YPGLYLFTSACRFVRPVRNITIPSEESNNIELIGPFEQVYMEISCPXXXXXXXXDVXXXT 825
            YPGLYLFTS CRFVRPV+NI+IPS +  NIELIGPFEQV+MEI CP        D    T
Sbjct: 615  YPGLYLFTSPCRFVRPVKNISIPSTDDQNIELIGPFEQVFMEIKCPDGGDGGRRDSFPAT 674

Query: 824  -----------------PWSDHNQSPRNMYQCQMAKQTMGFSCQSLSARADQKMYHLQTP 696
                             PW +HNQSPRNMYQCQMAKQTMGFS Q+L  RADQK+YHLQTP
Sbjct: 675  HEEIHPTGMLSVVANLIPWPNHNQSPRNMYQCQMAKQTMGFSLQALHCRADQKLYHLQTP 734

Query: 695  QTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYSGYDMEDAMVLNKSSVERGMCRGYIYQTE 516
            Q+PIVRT TY KYN+D  P GTNAIVAVLAY+GYDMEDAM+LNKSSV+RGM  G IYQTE
Sbjct: 735  QSPIVRTSTYTKYNMDAYPSGTNAIVAVLAYTGYDMEDAMILNKSSVDRGMFHGQIYQTE 794

Query: 515  TIDLSEQKNKSDPSQRSFGRSNLDKTWHHLIDSDGLPFVGQRINPDEPYCSIYNEITSGV 336
            TIDLS+Q N+SD  Q  F RSN+D++ H LIDSDGLP+VGQ I P+EP+CSIYNE+T G 
Sbjct: 795  TIDLSDQSNRSDRVQSVFRRSNVDRSMHSLIDSDGLPYVGQTIKPNEPFCSIYNEVTGGT 854

Query: 335  SLNKLKGSDHXXXXXXXXXVKNKKHIQKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQ 156
               K KGS+          VKNK+ ++K N+RFR PRNP+IGDKFSSRHGQKGVCSQLW 
Sbjct: 855  RTMKRKGSEPVVVDYVAIDVKNKQKLRKVNIRFRQPRNPIIGDKFSSRHGQKGVCSQLWP 914

Query: 155  DTDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALNGNFVDAT 3
            D DMPFSGATGMRPDLIINPHAFPSRMTIAMLLES+AAKGG+L+G +VDAT
Sbjct: 915  DIDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKYVDAT 965


>ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X2 [Citrus sinensis]
          Length = 954

 Score = 1239 bits (3206), Expect = 0.0
 Identities = 622/903 (68%), Positives = 721/903 (79%), Gaps = 21/903 (2%)
 Frame = -1

Query: 2684 KLRIWFTNPEIFSPQKER-SRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDG--VIVR 2514
            +L+I   NPEIF PQKE+ S+ + DAL PFECRQAK+SY+GK M D+ FQY D    +VR
Sbjct: 51   RLKISVGNPEIFPPQKEQGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDAGSPVVR 110

Query: 2513 EKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGN 2334
            E+F  GQ P+MLK++ CHL+ A D +KLV LKEE +EMGGYFILNGLERV RS+ILPK N
Sbjct: 111  ERFNFGQFPVMLKTRRCHLQGA-DSQKLVSLKEEAAEMGGYFILNGLERVFRSVILPKQN 169

Query: 2333 YPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLP 2154
            YP SMVR+SFRDRREGYTDKAV IRCVR+DQS+VT+KLYYL+NGS RLGFW+QG+EYLLP
Sbjct: 170  YPMSMVRSSFRDRREGYTDKAVVIRCVRKDQSSVTLKLYYLLNGSVRLGFWLQGKEYLLP 229

Query: 2153 VGIILKALTETTDHEIYVSLTCCYNDKSDRGKGSVGTQLIGERAKIILDELQDFSLCTRT 1974
            VGI+LKAL +T D EI+  LTCCY++K  + KG+VG+ L+ ER KIIL E+QD SL TR 
Sbjct: 230  VGIVLKALVDTNDLEIFNHLTCCYDEKYKKEKGAVGSPLVSERVKIILAEVQDLSLTTRL 289

Query: 1973 QCLQHIGEHFQPVMVGMEKQSYSDVANAVLRDYIFVHLDDNIDKFNLLIVMLQKLFSLVD 1794
            QCLQHIGEHFQPV+ G++ +SY  VA  V+RDYIFVHL+DN DKFNLLI MLQKLFSLVD
Sbjct: 290  QCLQHIGEHFQPVIDGLQSESYYAVAETVIRDYIFVHLNDNNDKFNLLIFMLQKLFSLVD 349

Query: 1793 QTSVPDNPDSLQNQECLLPGHLITIYLKEKLQDWLLRAKRTLQDEVENKTKKFELSSVAD 1614
             TSV DNPDSLQNQE LLPGHLITIYLKEKL+DWL + K+ +QDE+EN  KKF+  ++A+
Sbjct: 350  HTSVSDNPDSLQNQEILLPGHLITIYLKEKLEDWLRKGKKLIQDEIENNGKKFDFFNLAN 409

Query: 1613 VTKVLDKCSPKQIGAAIENMLKTGRLVTQSGLDQLQRAGMTIMAERLNYLRFISHFRAVH 1434
            + KV++K   KQIG +IE MLKTGRL TQ+GLD  QRAG T+ AERLN+LRFIS FRAVH
Sbjct: 410  IKKVMEKNPSKQIGTSIETMLKTGRLATQTGLDLQQRAGYTVQAERLNFLRFISFFRAVH 469

Query: 1433 RGASFAGLRTTSVRKLLPESWGFMCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDF 1254
            RGASFAGLRTTSVRKLLPESWGF+CPVHTPDGEPCGLLNHMTS+CR+ SYYDS G ++DF
Sbjct: 470  RGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVASYYDSRGNIRDF 529

Query: 1253 LEIRKSILKVLVSIGMTXXXXXXXXXXXPEVLPVLLDGRVVGSIPFDIIEKAVSHMRRLK 1074
             ++R SIL+VL+ +GM            P VL VLLDGRVVG IP   IEK V+H+RRLK
Sbjct: 530  SKMRTSILRVLIGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLRRLK 589

Query: 1073 VSDTSAIPEDLEVGYVPLSMGGAYPGLYLFTSACRFVRPVRNITIPSEESNNIELIGPFE 894
            VS  S IP+DLEVGYVPLS+GGAYPGLYLFTS  +FVRPVRNI++PSEES NIELIGPFE
Sbjct: 590  VSAASVIPDDLEVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIGPFE 649

Query: 893  QVYMEISCP-----------------XXXXXXXXDVXXXTPWSDHNQSPRNMYQCQMAKQ 765
            QV+MEI CP                          V   TP+SDHNQSPRNMYQCQMAKQ
Sbjct: 650  QVFMEIRCPDGGDGGRRNAFPATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQMAKQ 709

Query: 764  TMGFSCQSLSARADQKMYHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYSGYDME 585
            TMGFS Q+L  RADQK+YHLQTPQTPIVRT TY KY+ID+ P GTNAIVAVLAY+GYDME
Sbjct: 710  TMGFSVQALKFRADQKLYHLQTPQTPIVRTNTYTKYSIDEYPTGTNAIVAVLAYTGYDME 769

Query: 584  DAMVLNKSSVERGMCRGYIYQTETIDLSEQKNKSDPSQRSFGRSNLDKTWHHLIDSDGLP 405
            DAM+LNKSSV+RGMC G IYQTETIDLS+  NK D  Q+ F R+   K+ H +IDSDGLP
Sbjct: 770  DAMILNKSSVDRGMCHGQIYQTETIDLSDDGNKVDRGQKLFRRNKDAKSLHSVIDSDGLP 829

Query: 404  FVGQRINPDEPYCSIYNEITSGVSLNKLKGSDHXXXXXXXXXVKNKKHI-QKANVRFRHP 228
            +VGQ I+P EPYCSIY++ T+    N  KGS+          +KN K++ QKAN+RFRH 
Sbjct: 830  YVGQMIHPGEPYCSIYDKTTNSWRTNSRKGSESVFVDYVAVDMKNSKNLPQKANIRFRHT 889

Query: 227  RNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESI 48
            RNP+IGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFPSRMTIAMLLES+
Sbjct: 890  RNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESV 949

Query: 47   AAK 39
            AAK
Sbjct: 950  AAK 952


>ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1169

 Score = 1225 bits (3169), Expect = 0.0
 Identities = 615/911 (67%), Positives = 718/911 (78%), Gaps = 18/911 (1%)
 Frame = -1

Query: 2681 LRIWFTNPEIFS-PQKERSRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIVREKF 2505
            LRIWF +  I   P K+RS    + LYPFECRQ ++SY+GK + D+ FQ GD   VRE+F
Sbjct: 56   LRIWFADDPILGRPLKDRS---SEPLYPFECRQTRISYTGKLLADIYFQRGDKAPVREQF 112

Query: 2504 CLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGNYPT 2325
              GQ PIML SK C+LR  +DP++LV  KEE SEMGGYFILNGLERVIR +ILPK NYP 
Sbjct: 113  NFGQFPIMLMSKCCNLRG-HDPQQLVSCKEEASEMGGYFILNGLERVIRPVILPKRNYPM 171

Query: 2324 SMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLPVGI 2145
            S VRNSFRDR+EGYTDKAV IRC R+DQS+VTVKLYYL NGSARLG WIQG+E+LLPVG+
Sbjct: 172  STVRNSFRDRKEGYTDKAVVIRCARDDQSSVTVKLYYLQNGSARLGVWIQGKEFLLPVGL 231

Query: 2144 ILKALTETTDHEIYVSLTCCYNDKSDRGKGSVGTQLIGERAKIILDELQDFSLCTRTQCL 1965
            ILKAL +T D+E+Y SLTCCY  K ++GKG+VGTQL+GERA+II++E+ +  L TR QCL
Sbjct: 232  ILKALVDTPDNELYASLTCCYPGKFEKGKGAVGTQLVGERAQIIINEVVELGLFTRGQCL 291

Query: 1964 QHIGEHFQPVMVGMEKQSYSDVANAVLRDYIFVHLDDNIDKFNLLIVMLQKLFSLVDQTS 1785
            ++IGEHFQP+M G+E +SYS V +AVL+DYIFVHLD N DKFNLLI MLQKLFSL+DQTS
Sbjct: 292  ENIGEHFQPLMSGLENESYSVVGDAVLKDYIFVHLDKNEDKFNLLIFMLQKLFSLMDQTS 351

Query: 1784 VPDNPDSLQNQECLLPGHLITIYLKEKLQDWLLRAKRTLQDEVENKTKKFELSSVADVTK 1605
            V DNPDSLQNQE LLPGHLITIYLKEKL+DWL R K+ LQDE++ +       SV  + K
Sbjct: 352  VLDNPDSLQNQEVLLPGHLITIYLKEKLEDWLQRTKKLLQDEIKKENNNINFGSVDSLKK 411

Query: 1604 VLDKCSPKQIGAAIENMLKTGRLVTQSGLDQLQRAGMTIMAERLNYLRFISHFRAVHRGA 1425
            VLDK   +QI  A+ENMLKTGR+ TQ+GLD  QRAG ++ AERLN+LRF+SHFRAVHRGA
Sbjct: 412  VLDKNPTRQISLAVENMLKTGRINTQTGLDLQQRAGFSVQAERLNFLRFLSHFRAVHRGA 471

Query: 1424 SFAGLRTTSVRKLLPESWGFMCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEI 1245
            SFAGLRTTSVRKLLPESWGF+CPVHTPDGEPCGLLNHMT +CRITSY+D++G ++DF +I
Sbjct: 472  SFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTCRITSYFDAQGNIRDFTKI 531

Query: 1244 RKSILKVLVSIGMTXXXXXXXXXXXPEVLPVLLDGRVVGSIPFDIIEKAVSHMRRLKVSD 1065
            R SIL VL+ +GM            P  L VLLDGRVVG I    +EK V+H+R+LKVS 
Sbjct: 532  RMSILNVLIEVGMIPSLPMLVHVGLPANLSVLLDGRVVGYISSTQVEKVVAHLRKLKVSA 591

Query: 1064 TSAIPEDLEVGYVPLSMGGAYPGLYLFTSACRFVRPVRNITIPSEESNNIELIGPFEQVY 885
             S IP+DLEVGYVPLSMGGAYPGLYLFTS  RFVRPV+NI+I + E  NIELIGPFEQV+
Sbjct: 592  ASVIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVKNISISAVEGQNIELIGPFEQVF 651

Query: 884  MEISCP-----------------XXXXXXXXDVXXXTPWSDHNQSPRNMYQCQMAKQTMG 756
            MEI CP                          V   TPWS+HNQSPRNMYQCQMAKQTMG
Sbjct: 652  MEIKCPDGRDGGRKDAFPATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMG 711

Query: 755  FSCQSLSARADQKMYHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYSGYDMEDAM 576
            FS Q+L  RADQK+YHL+TPQ+PIVRTKTY  Y +D+ P GTNAIVAVL+Y+GYDMEDAM
Sbjct: 712  FSLQALRNRADQKLYHLKTPQSPIVRTKTYTNYCVDEYPTGTNAIVAVLSYTGYDMEDAM 771

Query: 575  VLNKSSVERGMCRGYIYQTETIDLSEQKNKSDPSQRSFGRSNLDKTWHHLIDSDGLPFVG 396
            +L+KSSV+RGM  G +YQTE++DLS+QK +S  SQRSF RS  DK+ H LIDSDGLP+VG
Sbjct: 772  ILSKSSVDRGMFHGLVYQTESVDLSDQKGRSG-SQRSFRRSAADKSHHSLIDSDGLPYVG 830

Query: 395  QRINPDEPYCSIYNEITSGVSLNKLKGSDHXXXXXXXXXVKNKKHIQKANVRFRHPRNPV 216
            Q INPDEPY SIY+E+   +   K KGS+          +  KKH+QK N+RFRHPRNP+
Sbjct: 831  QTINPDEPYYSIYDEVKGAIRTTKRKGSE--PAIVDYVAIDGKKHLQKVNIRFRHPRNPI 888

Query: 215  IGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESIAAKG 36
            IGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFPSRMTIAMLLES+AAKG
Sbjct: 889  IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKG 948

Query: 35   GALNGNFVDAT 3
            G+L+G FVDAT
Sbjct: 949  GSLHGKFVDAT 959


>ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1171

 Score = 1218 bits (3151), Expect = 0.0
 Identities = 611/911 (67%), Positives = 717/911 (78%), Gaps = 18/911 (1%)
 Frame = -1

Query: 2681 LRIWFTNPEIFS-PQKERSRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIVREKF 2505
            LRIWF +  I   P K+RS    + LYPFECRQ ++SY+GK + D+ FQ GD   VRE+F
Sbjct: 58   LRIWFADDPILGRPLKDRST---EPLYPFECRQTRISYTGKLLADIYFQRGDKAPVREQF 114

Query: 2504 CLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGNYPT 2325
              GQ PIML SK C+LR  +DP++LV  KEE SEMGGYFILNGLERVIR +ILPK NYP 
Sbjct: 115  NFGQFPIMLMSKCCNLRG-HDPQQLVYCKEESSEMGGYFILNGLERVIRPVILPKRNYPM 173

Query: 2324 SMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLPVGI 2145
            S VRNSFRDR+EGYTDKAV IRC R+DQS+VTVKLYYL NGSARLG WIQG+E+LLPVG+
Sbjct: 174  STVRNSFRDRKEGYTDKAVVIRCARDDQSSVTVKLYYLQNGSARLGVWIQGKEFLLPVGL 233

Query: 2144 ILKALTETTDHEIYVSLTCCYNDKSDRGKGSVGTQLIGERAKIILDELQDFSLCTRTQCL 1965
            ILKAL +T D+E+Y SLTCCY +K ++GKG+VGTQL+GERA+II++E+ D  L TR QCL
Sbjct: 234  ILKALIDTPDNELYASLTCCYPEKFEKGKGAVGTQLVGERAQIIINEVVDLGLFTRGQCL 293

Query: 1964 QHIGEHFQPVMVGMEKQSYSDVANAVLRDYIFVHLDDNIDKFNLLIVMLQKLFSLVDQTS 1785
            +HIGEHFQP+M G+E + YS V +AVL+DYIFVHLD N DKFNLLI MLQKLFSL+DQTS
Sbjct: 294  EHIGEHFQPLMGGLENEPYSVVGDAVLKDYIFVHLDKNEDKFNLLIFMLQKLFSLMDQTS 353

Query: 1784 VPDNPDSLQNQECLLPGHLITIYLKEKLQDWLLRAKRTLQDEVENKTKKFELSSVADVTK 1605
            V DNPDSLQNQE LLPGHLITIYLKEKL+DWL R K+ LQDE++ ++      SV  + K
Sbjct: 354  VLDNPDSLQNQEVLLPGHLITIYLKEKLEDWLQRTKKLLQDEIKKESNNINFGSVDSLKK 413

Query: 1604 VLDKCSPKQIGAAIENMLKTGRLVTQSGLDQLQRAGMTIMAERLNYLRFISHFRAVHRGA 1425
            VLDK   +QI  A+ENMLKTGR+ TQ+GLD  QRAG ++ AERLN+LRF+SHFRAVHRGA
Sbjct: 414  VLDKNPTRQISLAVENMLKTGRINTQTGLDLQQRAGFSVQAERLNFLRFLSHFRAVHRGA 473

Query: 1424 SFAGLRTTSVRKLLPESWGFMCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEI 1245
            SFAGLRTTSVRKLLPESWGF+CPVHTPDGEPCGLLNHMT +CRITSY+D++G ++DF ++
Sbjct: 474  SFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTCRITSYFDAQGNIRDFTKM 533

Query: 1244 RKSILKVLVSIGMTXXXXXXXXXXXPEVLPVLLDGRVVGSIPFDIIEKAVSHMRRLKVSD 1065
            + SIL VL+ +GM            P  L VLLDGRVVG I    +EK V+H+R+LKVS 
Sbjct: 534  QMSILNVLIEVGMIPSLPMLVHAGLPANLSVLLDGRVVGYISSTQVEKVVAHLRKLKVSA 593

Query: 1064 TSAIPEDLEVGYVPLSMGGAYPGLYLFTSACRFVRPVRNITIPSEESNNIELIGPFEQVY 885
             S IP+DLEVGYVPLSMGGAYPGLYLFTS  RFVRPV+NI+I + E  NIELIGPFEQV+
Sbjct: 594  ASVIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVKNISISAVEGQNIELIGPFEQVF 653

Query: 884  MEISCP-----------------XXXXXXXXDVXXXTPWSDHNQSPRNMYQCQMAKQTMG 756
            MEI CP                          V   TPWS+HNQSPRNMYQCQMAKQTMG
Sbjct: 654  MEIRCPDGRDGGRKDAFPATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMG 713

Query: 755  FSCQSLSARADQKMYHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYSGYDMEDAM 576
            FS Q+L  RADQK+YHL+TPQ+PIVRTKTY  Y +D+ P GTNAIVAVL+Y+GYDMEDAM
Sbjct: 714  FSLQALRNRADQKLYHLKTPQSPIVRTKTYTNYCVDEYPTGTNAIVAVLSYTGYDMEDAM 773

Query: 575  VLNKSSVERGMCRGYIYQTETIDLSEQKNKSDPSQRSFGRSNLDKTWHHLIDSDGLPFVG 396
            +L+KSSV+RGM  G +YQTE+IDLS+QK +S  SQRSF RS  DK++H LIDSDGLP+VG
Sbjct: 774  ILSKSSVDRGMFHGLVYQTESIDLSDQKGRSG-SQRSFRRSAADKSYHSLIDSDGLPYVG 832

Query: 395  QRINPDEPYCSIYNEITSGVSLNKLKGSDHXXXXXXXXXVKNKKHIQKANVRFRHPRNPV 216
            Q I PDEPY S Y+E+   +   K KGS+          +  KK +QK N+RFRHPRNP+
Sbjct: 833  QTIKPDEPYYSTYDEVKGAIRTTKRKGSE--PAIVDYVAIDGKKQLQKVNIRFRHPRNPI 890

Query: 215  IGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESIAAKG 36
            IGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFPSRMTIAMLLES+AAKG
Sbjct: 891  IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKG 950

Query: 35   GALNGNFVDAT 3
            G+L+G +VDAT
Sbjct: 951  GSLHGKYVDAT 961


>ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Capsella rubella]
            gi|482575323|gb|EOA39510.1| hypothetical protein
            CARUB_v10008127mg [Capsella rubella]
          Length = 1171

 Score = 1214 bits (3141), Expect = 0.0
 Identities = 598/909 (65%), Positives = 723/909 (79%), Gaps = 21/909 (2%)
 Frame = -1

Query: 2666 TNPEIFSPQKER--SRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIVREKFCLGQ 2493
            TNP +F+PQKE   S +  + L+PFECRQAK+SY+G FM D+ F+Y +GV+VR+KF  GQ
Sbjct: 49   TNPVVFAPQKESFSSTSRKEPLFPFECRQAKISYTGTFMADVCFKYNEGVVVRDKFDFGQ 108

Query: 2492 LPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGNYPTSMVR 2313
             PIML SKLC LR A D +KL+  KE  SEMGGYF+LNG+ERV R +I PK N+PTSM+R
Sbjct: 109  FPIMLMSKLCSLRGA-DCRKLLKCKESTSEMGGYFVLNGIERVFRCVIAPKRNHPTSMIR 167

Query: 2312 NSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLPVGIILKA 2133
            NSFRDRREGY+DKAV IRCVR+DQS+VTVKLYYL NGSAR+GFWI GREYLLPVG++LKA
Sbjct: 168  NSFRDRREGYSDKAVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGGREYLLPVGLVLKA 227

Query: 2132 LTETTDHEIYVSLTCCYNDKSDRGKGSVGTQLIGERAKIILDELQDFSLCTRTQCLQHIG 1953
            LT+T D E+Y SL CCYN+   RG G++GTQL+ ERAK+ILDE++D  L TR QC +H+G
Sbjct: 228  LTKTNDEEVYKSLNCCYNENYGRGDGAIGTQLVRERAKVILDEVRDMGLFTREQCRKHLG 287

Query: 1952 EHFQPVMVGMEKQSYSDVANAVLRDYIFVHLDDNIDKFNLLIVMLQKLFSLVDQTSVPDN 1773
            EHFQPV+ G+EK+SY  VA AVLRDYIFVHLD++ DKFNLLI ++QKL+SLVDQTS+PDN
Sbjct: 288  EHFQPVLDGLEKESYPTVAEAVLRDYIFVHLDNDHDKFNLLIFLIQKLYSLVDQTSLPDN 347

Query: 1772 PDSLQNQECLLPGHLITIYLKEKLQDWLLRAKRTLQDEVENKTKK--FELSSVADVTKVL 1599
            PDSLQNQE L+PGHLIT+YLKEKL++WL + K  L+DE+ N + K  F   S+ADV K+ 
Sbjct: 348  PDSLQNQEILVPGHLITVYLKEKLEEWLRKCKSLLKDELHNTSSKSKFSFESLADVKKLF 407

Query: 1598 DKCSPKQIGAAIENMLKTGRLVTQSGLDQLQRAGMTIMAERLNYLRFISHFRAVHRGASF 1419
            +K  P+ +G +IE +LKTGR+ TQSGLD  QRAG T+ AERLN+LRF+S FRAVHRGASF
Sbjct: 408  NKNPPRSVGMSIETLLKTGRMNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASF 467

Query: 1418 AGLRTTSVRKLLPESWGFMCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEIRK 1239
            AGLRTT+VRKLLPESWGF+CPVHTPDGEPCGLLNHMT + RITS +DS+G ++DFL+IRK
Sbjct: 468  AGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTSRITSQFDSKGNIRDFLKIRK 527

Query: 1238 SILKVLVSIGMTXXXXXXXXXXXPEVLPVLLDGRVVGSIPFDIIEKAVSHMRRLKVSDTS 1059
            S+++VL+  GM            PEV+ VLLDG+VVG++  +++   VS++RRLK+   S
Sbjct: 528  SVVEVLIGAGMVSSLPKLVQAAPPEVIHVLLDGQVVGTLSSNLVTNVVSYLRRLKIEAPS 587

Query: 1058 AIPEDLEVGYVPLSMGGAYPGLYLFTSACRFVRPVRNITIPSEESNNIELIGPFEQVYME 879
             IPEDLEVGYVP SMGG+YPGLYL +   RF+RPV+NI+IPSE   +IELIGPFEQV+ME
Sbjct: 588  VIPEDLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNISIPSE---SIELIGPFEQVFME 644

Query: 878  ISCPXXXXXXXXD-----------------VXXXTPWSDHNQSPRNMYQCQMAKQTMGFS 750
            ISCP        +                 V   TPWSDHNQSPRNMYQCQMAKQTM +S
Sbjct: 645  ISCPDGGNGGRNNSCPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYS 704

Query: 749  CQSLSARADQKMYHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYSGYDMEDAMVL 570
             Q+L  RADQK+YHLQTPQ+P+VRTKTY  Y+ID+ P GTNAIVAVLA++G+DMEDAM+L
Sbjct: 705  TQALQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMIL 764

Query: 569  NKSSVERGMCRGYIYQTETIDLSEQKNKSDPSQRSFGRSNLDKTWHHLIDSDGLPFVGQR 390
            NKSSVERGMC G IYQTE IDLS+Q ++ D   +SF RS  DK+ H  ID+DGLP+VGQ+
Sbjct: 765  NKSSVERGMCHGQIYQTENIDLSDQNSRYDSGHKSFRRSTTDKSDHSTIDADGLPYVGQK 824

Query: 389  INPDEPYCSIYNEITSGVSLNKLKGSDHXXXXXXXXXVKNKKHIQKANVRFRHPRNPVIG 210
            I PDEPY SIY+E+T+ +   K KG+D          +K+KKH QKAN+RFRH RNP+IG
Sbjct: 825  IYPDEPYYSIYDEVTNRIRTIKRKGTDPVIVDFVSVDMKSKKHPQKANIRFRHARNPIIG 884

Query: 209  DKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESIAAKGGA 30
            DKFSSRHGQKGVCSQLW D DMPF+G TGMRPDLIINPHAFPSRMTIAMLLESIAAKGG+
Sbjct: 885  DKFSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGS 944

Query: 29   LNGNFVDAT 3
            L+G FVDAT
Sbjct: 945  LHGKFVDAT 953


>ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arabidopsis lyrata subsp.
            lyrata] gi|297339431|gb|EFH69848.1| hypothetical protein
            ARALYDRAFT_313639 [Arabidopsis lyrata subsp. lyrata]
          Length = 1188

 Score = 1213 bits (3139), Expect = 0.0
 Identities = 600/910 (65%), Positives = 720/910 (79%), Gaps = 19/910 (2%)
 Frame = -1

Query: 2675 IWFTNPEIFSPQKE--RSRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIVREKFC 2502
            +W  NP +F+PQKE  RS +  + L PFECRQAK+SY+G FM D+ F+Y DGV+VR++F 
Sbjct: 68   LWLENPVVFAPQKESFRSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVVVRDRFD 127

Query: 2501 LGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGNYPTS 2322
             GQ PIML SKLC LR A D +KL+  KE  SEMGGYFILNG+ERV R +I PK N+PTS
Sbjct: 128  FGQFPIMLMSKLCSLRGA-DCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTS 186

Query: 2321 MVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLPVGII 2142
            M+RNSFRDR+EGYT+KAV  RCVR+DQS+VTVKLYYL NGSAR+GFWI GREYLLPVG++
Sbjct: 187  MIRNSFRDRKEGYTEKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLV 246

Query: 2141 LKALTETTDHEIYVSLTCCYNDKSDRGKGSVGTQLIGERAKIILDELQDFSLCTRTQCLQ 1962
            LKALT T D EIY SL CCY++   RG G++GTQLI ERAKIILDE++D  L TR QC +
Sbjct: 247  LKALTNTCDEEIYESLNCCYSEHYGRGDGAIGTQLIRERAKIILDEVRDLGLFTREQCRK 306

Query: 1961 HIGEHFQPVMVGMEKQSYSDVANAVLRDYIFVHLDDNIDKFNLLIVMLQKLFSLVDQTSV 1782
            H+G+HFQPV+ G+EK+S+  VA AVLRDY+FVHLD++ DKFNLLI ++QKL+SLVDQTS+
Sbjct: 307  HLGQHFQPVLDGLEKESHPMVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSL 366

Query: 1781 PDNPDSLQNQECLLPGHLITIYLKEKLQDWLLRAKRTLQDEVENKTKKFELSSVADVTKV 1602
            PDNPDSLQNQE L+PGH+ITIYLKEKL+DWL + K  L+DE+ N + KF   S+ADV K+
Sbjct: 367  PDNPDSLQNQEILVPGHVITIYLKEKLEDWLRKCKSLLKDELLNTSSKFSFESLADVKKL 426

Query: 1601 LDKCSPKQIGAAIENMLKTGRLVTQSGLDQLQRAGMTIMAERLNYLRFISHFRAVHRGAS 1422
            ++K  P+ IG +IE +LKTG L TQSGLD  QRAG T+ AERLN+LRF+S FRAVHRGAS
Sbjct: 427  INKNPPRSIGTSIETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGAS 486

Query: 1421 FAGLRTTSVRKLLPESWGFMCPVHTPDGEPCGLLNHMTSSCRITSYYDSEGKVKDFLEIR 1242
            FAGLRTT+VRKLLPESWGF+CPVHTPDG PCGLLNHMT + RITS +DS+G ++DFL+IR
Sbjct: 487  FAGLRTTTVRKLLPESWGFLCPVHTPDGTPCGLLNHMTCTSRITSQFDSKGNIRDFLKIR 546

Query: 1241 KSILKVLVSIGMTXXXXXXXXXXXPEVLPVLLDGRVVGSIPFDIIEKAVSHMRRLKVSDT 1062
            KS+++VL   GM            P+V+ VLLDG+VVG++  +++ K VS++RRLKV   
Sbjct: 547  KSVVEVLTGAGMVSSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYLRRLKVEAP 606

Query: 1061 SAIPEDLEVGYVPLSMGGAYPGLYLFTSACRFVRPVRNITIPSEESNNIELIGPFEQVYM 882
            S IPEDLEVGYVP+SMGG+YPGLYL +   RF+RPV+NI+IPSE   NIELIGPFEQV+M
Sbjct: 607  SVIPEDLEVGYVPISMGGSYPGLYLASCPARFIRPVKNISIPSE---NIELIGPFEQVFM 663

Query: 881  EISCP-----------------XXXXXXXXDVXXXTPWSDHNQSPRNMYQCQMAKQTMGF 753
            EISCP                          V   TPWSDHNQSPRNMYQCQMAKQTM +
Sbjct: 664  EISCPDGGNGGRNNSSPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAY 723

Query: 752  SCQSLSARADQKMYHLQTPQTPIVRTKTYEKYNIDDCPLGTNAIVAVLAYSGYDMEDAMV 573
            S Q+L  RADQK+YHLQTPQ+P+VRTKTY  Y+ID+ P GTNAIVAVLA++G+DMEDAM+
Sbjct: 724  STQALQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMI 783

Query: 572  LNKSSVERGMCRGYIYQTETIDLSEQKNKSDPSQRSFGRSNLDKTWHHLIDSDGLPFVGQ 393
            LNKSSVERGMC G IYQTE IDLS+Q ++ D   +SF RS  DK+ H  ID+DGLP+VGQ
Sbjct: 784  LNKSSVERGMCHGQIYQTENIDLSDQNSRYDSGHKSFRRSTTDKSDHSRIDADGLPYVGQ 843

Query: 392  RINPDEPYCSIYNEITSGVSLNKLKGSDHXXXXXXXXXVKNKKHIQKANVRFRHPRNPVI 213
            +I PDEPYC IY+E+T    L K KG+D          +K+KKH QKAN+RFRH RNP+I
Sbjct: 844  KIYPDEPYCRIYDEVTGKQRLMKGKGTDPVIVDFVSVDMKSKKHPQKANIRFRHARNPII 903

Query: 212  GDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESIAAKGG 33
            GDKFSSRHGQKGVCSQLW D +MPF+G TGMRPDLIINPHAFPSRMTIAMLLESIAAKGG
Sbjct: 904  GDKFSSRHGQKGVCSQLWPDIEMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGG 963

Query: 32   ALNGNFVDAT 3
            +L+G FVDAT
Sbjct: 964  SLHGKFVDAT 973