BLASTX nr result

ID: Mentha25_contig00005456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00005456
         (540 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU28892.1| hypothetical protein MIMGU_mgv1a006975mg [Mimulus...    78   2e-12
ref|XP_007045750.1| 18S pre-ribosomal assembly protein gar2-rela...    61   2e-07
ref|XP_007045749.1| 18S pre-ribosomal assembly protein gar2-rela...    61   2e-07

>gb|EYU28892.1| hypothetical protein MIMGU_mgv1a006975mg [Mimulus guttatus]
          Length = 424

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 64/184 (34%), Positives = 88/184 (47%), Gaps = 5/184 (2%)
 Frame = -3

Query: 538 GNKVMQLSDQVLDEETVXXXXXXXXXXXXETG--KDVQ-SSCLPYNSKVENEIITFNFSS 368
           G  V Q  DQ+L+E+                G  +DV+ SS + YNS+VE+  ITFNF S
Sbjct: 232 GGVVTQPPDQILNEKPASRSSAATSSSAEAEGVEEDVEASSSVLYNSEVESGTITFNFDS 291

Query: 367 PEGVAASNGTAEDIKEKCTENLPAATSNVED--DSHKQSLVSNEENSTTRDGSSCANAPE 194
                      E++K + + +  + TSN  D   S K     NE+NS   +GSS      
Sbjct: 292 T--------VTENMKPQDSVDSSSVTSNNIDCVGSSKDREDENEKNSEQNEGSS------ 337

Query: 193 ASSEHKQANSDAISIDEAHSSEPSAPVVNQLQQDMGETSFSAASMITYSGPIAFSGSLSH 14
                                   A +  Q++ + GETSF+AAS++TYSGPIA+SGSLS 
Sbjct: 338 ------------------------AIISRQMKYEEGETSFAAASLVTYSGPIAYSGSLSL 373

Query: 13  RSDG 2
           RSDG
Sbjct: 374 RSDG 377


>ref|XP_007045750.1| 18S pre-ribosomal assembly protein gar2-related, putative isoform 2
           [Theobroma cacao] gi|590698568|ref|XP_007045751.1| 18S
           pre-ribosomal assembly protein gar2-related, putative
           isoform 2 [Theobroma cacao]
           gi|590698571|ref|XP_007045752.1| 18S pre-ribosomal
           assembly protein gar2-related, putative isoform 2
           [Theobroma cacao] gi|508709685|gb|EOY01582.1| 18S
           pre-ribosomal assembly protein gar2-related, putative
           isoform 2 [Theobroma cacao] gi|508709686|gb|EOY01583.1|
           18S pre-ribosomal assembly protein gar2-related,
           putative isoform 2 [Theobroma cacao]
           gi|508709687|gb|EOY01584.1| 18S pre-ribosomal assembly
           protein gar2-related, putative isoform 2 [Theobroma
           cacao]
          Length = 470

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 33/144 (22%)
 Frame = -3

Query: 337 AEDIKEKCTENLPAATSNVED-DSHKQS--LVSNEENSTTRDGSSCANAPEASSEHK--- 176
           ++D  E+   ++PA  S  E+ DS K    L+S  + ST+ + +S +   E S ++K   
Sbjct: 279 SKDSNEEAIVSVPALVSATEELDSGKGEAILISPAQVSTSEESTSSSLVNEVSYDNKLET 338

Query: 175 -------QANSDAISIDEAHSSEPSAP----------------VVNQLQQDMGETSFSAA 65
                   +++   S DE H +  S P                + N LQQ +GE+SFSAA
Sbjct: 339 GSITFNLDSSAPTSSKDECHHNLDSEPLGTGSTPKLEVAADQSISNNLQQGIGESSFSAA 398

Query: 64  SMIT----YSGPIAFSGSLSHRSD 5
            ++T    YSGP+A+SGSLS RSD
Sbjct: 399 GLVTGLISYSGPVAYSGSLSLRSD 422


>ref|XP_007045749.1| 18S pre-ribosomal assembly protein gar2-related, putative isoform 1
           [Theobroma cacao] gi|508709684|gb|EOY01581.1| 18S
           pre-ribosomal assembly protein gar2-related, putative
           isoform 1 [Theobroma cacao]
          Length = 527

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 33/144 (22%)
 Frame = -3

Query: 337 AEDIKEKCTENLPAATSNVED-DSHKQS--LVSNEENSTTRDGSSCANAPEASSEHK--- 176
           ++D  E+   ++PA  S  E+ DS K    L+S  + ST+ + +S +   E S ++K   
Sbjct: 336 SKDSNEEAIVSVPALVSATEELDSGKGEAILISPAQVSTSEESTSSSLVNEVSYDNKLET 395

Query: 175 -------QANSDAISIDEAHSSEPSAP----------------VVNQLQQDMGETSFSAA 65
                   +++   S DE H +  S P                + N LQQ +GE+SFSAA
Sbjct: 396 GSITFNLDSSAPTSSKDECHHNLDSEPLGTGSTPKLEVAADQSISNNLQQGIGESSFSAA 455

Query: 64  SMIT----YSGPIAFSGSLSHRSD 5
            ++T    YSGP+A+SGSLS RSD
Sbjct: 456 GLVTGLISYSGPVAYSGSLSLRSD 479


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