BLASTX nr result
ID: Mentha25_contig00004085
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00004085
(314 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU27177.1| hypothetical protein MIMGU_mgv1a003367mg [Mimulus... 191 1e-46
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ... 184 1e-44
emb|CBI40014.3| unnamed protein product [Vitis vinifera] 183 2e-44
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-... 183 2e-44
emb|CAD20831.2| sigma factor [Spinacia oleracea] 179 3e-43
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-... 178 8e-43
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-... 178 8e-43
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-... 178 8e-43
gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis] 176 2e-42
ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [A... 176 2e-42
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-... 176 3e-42
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-... 175 5e-42
ref|XP_007203880.1| hypothetical protein PRUPE_ppa006657mg [Prun... 175 7e-42
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr... 174 9e-42
ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutr... 174 9e-42
ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cac... 172 3e-41
ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-... 172 4e-41
ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Caps... 172 4e-41
ref|XP_004500709.1| PREDICTED: RNA polymerase sigma factor sigB-... 172 6e-41
ref|NP_172330.1| RNA polymerase sigma subunit 2 [Arabidopsis tha... 171 7e-41
>gb|EYU27177.1| hypothetical protein MIMGU_mgv1a003367mg [Mimulus guttatus]
Length = 589
Score = 191 bits (484), Expect = 1e-46
Identities = 96/104 (92%), Positives = 102/104 (98%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
SDQSRTIRLPFHMVEATYRVKEARKQL+SENG+VPNDEEVAEATGLSMKRLSAVMLTPK
Sbjct: 420 SDQSRTIRLPFHMVEATYRVKEARKQLYSENGRVPNDEEVAEATGLSMKRLSAVMLTPKP 479
Query: 181 PRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKV 312
PRSLDQKIG+NQDLKPS+VI+DPEAETSEELLIKQFM+QDLA V
Sbjct: 480 PRSLDQKIGVNQDLKPSEVISDPEAETSEELLIKQFMKQDLADV 523
>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
rpoD1, putative [Ricinus communis]
Length = 569
Score = 184 bits (466), Expect = 1e-44
Identities = 92/104 (88%), Positives = 100/104 (96%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
SDQSRTIRLPFHMVEATYRVKEARKQL+SENG+ P+DEEVAEA GLSMKRLSAV+LTPKA
Sbjct: 400 SDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEAAGLSMKRLSAVLLTPKA 459
Query: 181 PRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKV 312
PRSLDQKIGMN DLKPS+VIADPEAET+EELL+KQFM+QDL KV
Sbjct: 460 PRSLDQKIGMNMDLKPSEVIADPEAETAEELLMKQFMKQDLEKV 503
>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 183 bits (464), Expect = 2e-44
Identities = 91/104 (87%), Positives = 102/104 (98%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
SDQSRTIRLPFHMVEATYRVKEARKQL+SENG+ PN+EEVAEATGLSMKRL+AV+LTPKA
Sbjct: 406 SDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKA 465
Query: 181 PRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKV 312
PRSLDQKIG+NQ+LKPS+VIADP+AET+EELLIKQFMR+DL KV
Sbjct: 466 PRSLDQKIGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKV 509
>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
Length = 578
Score = 183 bits (464), Expect = 2e-44
Identities = 91/104 (87%), Positives = 102/104 (98%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
SDQSRTIRLPFHMVEATYRVKEARKQL+SENG+ PN+EEVAEATGLSMKRL+AV+LTPKA
Sbjct: 409 SDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKA 468
Query: 181 PRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKV 312
PRSLDQKIG+NQ+LKPS+VIADP+AET+EELLIKQFMR+DL KV
Sbjct: 469 PRSLDQKIGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKV 512
>emb|CAD20831.2| sigma factor [Spinacia oleracea]
Length = 575
Score = 179 bits (455), Expect = 3e-43
Identities = 90/104 (86%), Positives = 98/104 (94%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
SDQSRTIRLPFHMVEATYRVKEARKQL SENGK PN+EEVAEATGLSMKRL+AV++TPKA
Sbjct: 406 SDQSRTIRLPFHMVEATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKA 465
Query: 181 PRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKV 312
PRSLDQKIG N +LKPS+VIADPEAET+E+LL KQFMRQDL KV
Sbjct: 466 PRSLDQKIGFNMNLKPSEVIADPEAETAEDLLTKQFMRQDLEKV 509
>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Citrus
sinensis]
Length = 525
Score = 178 bits (451), Expect = 8e-43
Identities = 88/104 (84%), Positives = 100/104 (96%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
SDQSRTIRLPFHMVEATYRVKEARKQL+SENG+ PN+EEVAEATGLSMKRL AV+LTPKA
Sbjct: 355 SDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKA 414
Query: 181 PRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKV 312
PRSLDQK G+NQ+LKPS+VIADPEAET+E+LLIK+FM++DL KV
Sbjct: 415 PRSLDQKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKV 458
>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
sinensis]
Length = 605
Score = 178 bits (451), Expect = 8e-43
Identities = 88/104 (84%), Positives = 100/104 (96%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
SDQSRTIRLPFHMVEATYRVKEARKQL+SENG+ PN+EEVAEATGLSMKRL AV+LTPKA
Sbjct: 435 SDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKA 494
Query: 181 PRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKV 312
PRSLDQK G+NQ+LKPS+VIADPEAET+E+LLIK+FM++DL KV
Sbjct: 495 PRSLDQKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKV 538
>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
lycopersicum]
Length = 613
Score = 178 bits (451), Expect = 8e-43
Identities = 88/104 (84%), Positives = 97/104 (93%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
SDQSRTIRLPFHMVEATYRVKEARKQL +ENG+ PND EVAEATGLSMKRL+AVMLTPKA
Sbjct: 444 SDQSRTIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEATGLSMKRLAAVMLTPKA 503
Query: 181 PRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKV 312
PRSLDQK+G N+ LKPS+V+ADP+AETSEE+L KQFMRQDL KV
Sbjct: 504 PRSLDQKVGFNESLKPSEVLADPDAETSEEILTKQFMRQDLEKV 547
>gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 574
Score = 176 bits (447), Expect = 2e-42
Identities = 86/104 (82%), Positives = 100/104 (96%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
SDQSRTIRLPFHMVEATYRVKEARKQL+SENG+ PNDEEVAEATGLSMKRL+AV+LTPKA
Sbjct: 404 SDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPNDEEVAEATGLSMKRLAAVLLTPKA 463
Query: 181 PRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKV 312
PRSL+QKIG+NQ+LKPS++IADP+AET E++L +QFM+QDL KV
Sbjct: 464 PRSLEQKIGINQNLKPSEIIADPDAETLEDVLTRQFMKQDLDKV 507
>ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
gi|548831956|gb|ERM94758.1| hypothetical protein
AMTR_s00011p00258380 [Amborella trichopoda]
Length = 570
Score = 176 bits (447), Expect = 2e-42
Identities = 86/104 (82%), Positives = 100/104 (96%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
SDQSRTIRLPFHMV+ATYRV+EA KQL+SENG+ PNDEEVAEATGLSMKRL+ V+LTPKA
Sbjct: 400 SDQSRTIRLPFHMVDATYRVREATKQLYSENGRHPNDEEVAEATGLSMKRLTTVLLTPKA 459
Query: 181 PRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKV 312
PRSLDQKIG+NQ+LKPS+VI+DPEAET+E+LL+KQFM+QDL KV
Sbjct: 460 PRSLDQKIGINQNLKPSEVISDPEAETAEDLLMKQFMKQDLEKV 503
>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-like [Fragaria vesca
subsp. vesca]
Length = 616
Score = 176 bits (446), Expect = 3e-42
Identities = 86/104 (82%), Positives = 101/104 (97%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
SDQSRTIRLPFHMVEATYRV+EA+KQL+S NG+ PNDEEVAEATGLSMKRL+AV+LTPKA
Sbjct: 447 SDQSRTIRLPFHMVEATYRVREAKKQLYSVNGRHPNDEEVAEATGLSMKRLAAVLLTPKA 506
Query: 181 PRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKV 312
PRSL+QKIG+NQ+LKPSDVIADP+AET+E+LL+K+FM+QDL KV
Sbjct: 507 PRSLEQKIGINQNLKPSDVIADPDAETAEDLLMKKFMKQDLEKV 550
>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
tuberosum]
Length = 613
Score = 175 bits (444), Expect = 5e-42
Identities = 88/104 (84%), Positives = 95/104 (91%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
SDQSR IRLPFHMVEATYRVKEARKQL +ENG+ PND EVAEA GLSMKRL+AVMLTPKA
Sbjct: 444 SDQSRMIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEAAGLSMKRLAAVMLTPKA 503
Query: 181 PRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKV 312
PRSLDQKIG N+ LKPS+V+ADPEAETSEE+L KQFMRQDL KV
Sbjct: 504 PRSLDQKIGFNESLKPSEVLADPEAETSEEILTKQFMRQDLEKV 547
>ref|XP_007203880.1| hypothetical protein PRUPE_ppa006657mg [Prunus persica]
gi|462399411|gb|EMJ05079.1| hypothetical protein
PRUPE_ppa006657mg [Prunus persica]
Length = 401
Score = 175 bits (443), Expect = 7e-42
Identities = 85/104 (81%), Positives = 101/104 (97%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
SDQSRTIRLPFHMVEATYRV+EA+KQL+S NG+ PNDEEVAEATGLSMKRL+AV+LTPKA
Sbjct: 232 SDQSRTIRLPFHMVEATYRVREAKKQLYSVNGRHPNDEEVAEATGLSMKRLAAVLLTPKA 291
Query: 181 PRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKV 312
PRSL+QKIG+NQ+LKPS+VIADPEAET+E++L+K+FM+QDL KV
Sbjct: 292 PRSLEQKIGINQNLKPSEVIADPEAETAEDMLMKKFMKQDLEKV 335
>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
gi|557539534|gb|ESR50578.1| hypothetical protein
CICLE_v10030998mg [Citrus clementina]
Length = 605
Score = 174 bits (442), Expect = 9e-42
Identities = 86/104 (82%), Positives = 99/104 (95%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
SDQSRTIRLPFHMVEATYRVKEARKQL+SENG+ PN+EEVA+ATGLSMKRL AV+L PKA
Sbjct: 435 SDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAKATGLSMKRLHAVLLAPKA 494
Query: 181 PRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKV 312
PRSLDQK G+NQ+LKPS+VIADPEAET+E+LLIK+FM++DL KV
Sbjct: 495 PRSLDQKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKV 538
>ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutrema salsugineum]
gi|557095448|gb|ESQ36030.1| hypothetical protein
EUTSA_v10007187mg [Eutrema salsugineum]
Length = 579
Score = 174 bits (442), Expect = 9e-42
Identities = 88/104 (84%), Positives = 97/104 (93%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
SDQSR IRLPFHMVEATYRVKEARKQL+SE GK P +EEVAEATGLSMKRL AV+L+PK
Sbjct: 410 SDQSRMIRLPFHMVEATYRVKEARKQLYSETGKQPENEEVAEATGLSMKRLMAVLLSPKP 469
Query: 181 PRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKV 312
PRSLDQKIG+NQ+LKPS+VIADPEAETSE++LIKQFMRQDL KV
Sbjct: 470 PRSLDQKIGINQNLKPSEVIADPEAETSEDILIKQFMRQDLDKV 513
>ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
gi|508718473|gb|EOY10370.1| RNApolymerase sigma subunit
2 [Theobroma cacao]
Length = 623
Score = 172 bits (437), Expect = 3e-41
Identities = 89/112 (79%), Positives = 102/112 (91%), Gaps = 8/112 (7%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
SDQSRTIRLPFHMVEATYRVKEARKQL+SENG+ P++EEVAEATGLSMKRL+AV+LTPKA
Sbjct: 443 SDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKA 502
Query: 181 PRSLDQKIGMNQDLKPS--------DVIADPEAETSEELLIKQFMRQDLAKV 312
PRSLDQKIG+NQ+LKPS +VIADPEAET+E++LIKQFMR+DL KV
Sbjct: 503 PRSLDQKIGINQNLKPSVCPVSSLAEVIADPEAETAEDMLIKQFMRKDLEKV 554
>ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-like [Glycine max]
Length = 564
Score = 172 bits (436), Expect = 4e-41
Identities = 83/101 (82%), Positives = 99/101 (98%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
SDQSRTIRLPFHMVEATYRVKEARKQL+SENG+ P+DEEVAEATGLSMKRL+AV++TPKA
Sbjct: 395 SDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDDEEVAEATGLSMKRLNAVLMTPKA 454
Query: 181 PRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDL 303
PRSL+QKIG+NQ+LKPS+VI+DP+AET+EE L+KQFM++DL
Sbjct: 455 PRSLEQKIGINQNLKPSEVISDPDAETAEEQLLKQFMKKDL 495
>ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
gi|482575837|gb|EOA40024.1| hypothetical protein
CARUB_v10008711mg [Capsella rubella]
Length = 571
Score = 172 bits (436), Expect = 4e-41
Identities = 86/104 (82%), Positives = 97/104 (93%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
SDQSR IRLPFHMVEATYRVKEARKQL++E G+ P +EEVAEATGLSMKRL AV+L+PK
Sbjct: 400 SDQSRMIRLPFHMVEATYRVKEARKQLYTEKGRHPENEEVAEATGLSMKRLMAVLLSPKP 459
Query: 181 PRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKV 312
PRSLDQKIGMNQ+LKPS+VIADPEAETSE++LIKQFMR+DL KV
Sbjct: 460 PRSLDQKIGMNQNLKPSEVIADPEAETSEDILIKQFMREDLDKV 503
>ref|XP_004500709.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cicer arietinum]
Length = 564
Score = 172 bits (435), Expect = 6e-41
Identities = 86/104 (82%), Positives = 98/104 (94%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
S QSRTIRLPFHMV ATY+VKEARKQL+SENG+ P+DEEVAEATGLSMKRLSAV+LTPKA
Sbjct: 395 SVQSRTIRLPFHMVGATYKVKEARKQLYSENGRQPDDEEVAEATGLSMKRLSAVLLTPKA 454
Query: 181 PRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKV 312
PRSL+QKIG+NQ LKPS+V+ADPEAET+EE LIKQFM++DL KV
Sbjct: 455 PRSLEQKIGINQSLKPSEVLADPEAETAEEQLIKQFMKKDLEKV 498
>ref|NP_172330.1| RNA polymerase sigma subunit 2 [Arabidopsis thaliana]
gi|75219074|sp|O22056.2|SIGB_ARATH RecName: Full=RNA
polymerase sigma factor sigB; Short=Sigma factor B;
Short=Sigma-B; AltName: Full=Protein ABERRANT
CHLOROPLAST 1; AltName: Full=RNA polymerase sigma factor
sig1; Short=Atsig1; Short=Sigma factor 1; AltName:
Full=RNA polymerase sigma factor sig2; Short=Atsig2;
Short=Sigma factor 2; AltName: Full=RNA polymerase sigma
factor sigA; Short=Sigma factor A; Short=Sigma-A; Flags:
Precursor gi|6664315|gb|AAF22897.1|AC006932_14 T27G7.22
[Arabidopsis thaliana]
gi|9802550|gb|AAF99752.1|AC003981_2 F22O13.2
[Arabidopsis thaliana] gi|2443357|dbj|BAA22427.1| SigB
[Arabidopsis thaliana] gi|2597831|emb|CAA75584.1| sigma
factor [Arabidopsis thaliana] gi|2879922|dbj|BAA24825.1|
plastid RNA polymerase sigma-subunit [Arabidopsis
thaliana] gi|5478446|dbj|BAA82449.1| sigma factor SigB
[Arabidopsis thaliana] gi|133778838|gb|ABO38759.1|
At1g08540 [Arabidopsis thaliana]
gi|332190182|gb|AEE28303.1| RNA polymerase sigma subunit
2 [Arabidopsis thaliana]
Length = 572
Score = 171 bits (434), Expect = 7e-41
Identities = 86/104 (82%), Positives = 96/104 (92%)
Frame = +1
Query: 1 SDQSRTIRLPFHMVEATYRVKEARKQLFSENGKVPNDEEVAEATGLSMKRLSAVMLTPKA 180
SDQSR IRLPFHMVEATYRVKEARKQL+SE GK P +EE+AEATGLSMKRL AV+L+PK
Sbjct: 401 SDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKP 460
Query: 181 PRSLDQKIGMNQDLKPSDVIADPEAETSEELLIKQFMRQDLAKV 312
PRSLDQKIGMNQ+LKPS+VIADPEA TSE++LIK+FMRQDL KV
Sbjct: 461 PRSLDQKIGMNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKV 504