BLASTX nr result
ID: Mentha25_contig00003939
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00003939
(372 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Mimulus... 211 8e-53
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-... 189 4e-46
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-... 189 4e-46
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The... 184 1e-44
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ... 183 2e-44
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] 183 2e-44
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [... 181 7e-44
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-... 181 1e-43
ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citr... 181 1e-43
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr... 181 1e-43
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu... 178 6e-43
emb|CAD20832.1| sigma factor [Spinacia oleracea] 175 7e-42
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-... 174 9e-42
gb|EPS65656.1| hypothetical protein M569_09119, partial [Genlise... 172 3e-41
ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun... 170 2e-40
ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis tha... 167 2e-39
gb|AAM91534.1| sigma factor SigC [Arabidopsis thaliana] 167 2e-39
dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsi... 166 3e-39
ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp.... 166 3e-39
ref|XP_006601060.1| PREDICTED: RNA polymerase sigma factor sigC ... 165 5e-39
>gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Mimulus guttatus]
Length = 478
Score = 211 bits (537), Expect = 8e-53
Identities = 102/122 (83%), Positives = 113/122 (92%)
Frame = -2
Query: 371 NYWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 192
NY GLGVAFEDLIQAG +GVLQGAERFDQ+R YKFSTYVQYW+RKSMSTLVA+H+RG+RI
Sbjct: 257 NYSGLGVAFEDLIQAGNIGVLQGAERFDQSRGYKFSTYVQYWIRKSMSTLVAKHARGVRI 316
Query: 191 PSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKIG 12
P TLSK +NQVHKARKAL SNG YPDD EIAKFTGLSVAK++SASKCLRVVGSIDQKIG
Sbjct: 317 PCTLSKVINQVHKARKALTTSNGKYPDDYEIAKFTGLSVAKVMSASKCLRVVGSIDQKIG 376
Query: 11 DF 6
++
Sbjct: 377 EY 378
>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
tuberosum]
Length = 555
Score = 189 bits (479), Expect = 4e-46
Identities = 91/121 (75%), Positives = 104/121 (85%)
Frame = -2
Query: 371 NYWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 192
NY GLGVAFEDLIQAG +GVLQGA RFD TR YKFSTYVQYW+RKS+S LVA+H+RG+RI
Sbjct: 336 NYRGLGVAFEDLIQAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRI 395
Query: 191 PSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKIG 12
P T+ K +NQ+HKARK L RS+G +P D EIAKFTGLS A+I ASKCLRVVGSIDQK+G
Sbjct: 396 PFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVG 455
Query: 11 D 9
D
Sbjct: 456 D 456
>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
lycopersicum]
Length = 551
Score = 189 bits (479), Expect = 4e-46
Identities = 91/121 (75%), Positives = 104/121 (85%)
Frame = -2
Query: 371 NYWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 192
NY GLGVAFEDLIQAG +GVLQGA RFD TR YKFSTYVQYW+RKS+S LVA+H+RG+RI
Sbjct: 332 NYRGLGVAFEDLIQAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRI 391
Query: 191 PSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKIG 12
P T+ K +NQ+HKARK L RS+G +P D EIAKFTGLS A+I ASKCLRVVGSIDQK+G
Sbjct: 392 PFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVG 451
Query: 11 D 9
D
Sbjct: 452 D 452
>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
C, putative [Theobroma cacao]
Length = 848
Score = 184 bits (466), Expect = 1e-44
Identities = 88/121 (72%), Positives = 107/121 (88%)
Frame = -2
Query: 371 NYWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 192
NY GLG+A EDLIQAG +GVLQGAERFD TR Y+FSTYVQ+W+RKS+S +VARH+RGI++
Sbjct: 628 NYRGLGIAHEDLIQAGSLGVLQGAERFDHTRGYRFSTYVQFWIRKSVSRIVARHARGIQV 687
Query: 191 PSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKIG 12
P TLS+A+ Q+ KARKAL +S+G YPD+ IAKFTGLS+AKI SA+KC+RVVGSIDQKIG
Sbjct: 688 PCTLSRAIVQIQKARKALSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRVVGSIDQKIG 747
Query: 11 D 9
D
Sbjct: 748 D 748
>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|296081598|emb|CBI20603.3| unnamed protein product
[Vitis vinifera]
Length = 561
Score = 183 bits (464), Expect = 2e-44
Identities = 87/121 (71%), Positives = 104/121 (85%)
Frame = -2
Query: 371 NYWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 192
NY G+GVAFED++QAG +GVLQGAERFD T+ Y+FSTYVQYW+RKSMSTLVARH+RG++I
Sbjct: 341 NYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKI 400
Query: 191 PSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKIG 12
P TL++A+ Q+ KARKAL +S+G YPDD EIAKFTGLS+AKI SA CLRVVGS DQ
Sbjct: 401 PFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRVVGSTDQSFQ 460
Query: 11 D 9
D
Sbjct: 461 D 461
>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
Length = 611
Score = 183 bits (464), Expect = 2e-44
Identities = 87/121 (71%), Positives = 104/121 (85%)
Frame = -2
Query: 371 NYWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 192
NY G+GVAFED++QAG +GVLQGAERFD T+ Y+FSTYVQYW+RKSMSTLVARH+RG++I
Sbjct: 391 NYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKI 450
Query: 191 PSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKIG 12
P TL++A+ Q+ KARKAL +S+G YPDD EIAKFTGLS+AKI SA CLRVVGS DQ
Sbjct: 451 PFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRVVGSTDQSFQ 510
Query: 11 D 9
D
Sbjct: 511 D 511
>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 560
Score = 181 bits (460), Expect = 7e-44
Identities = 88/121 (72%), Positives = 105/121 (86%)
Frame = -2
Query: 371 NYWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 192
NY G G+A EDL+QAG +GVL+GAERFD TR Y+FSTYVQYW+RKSMS +V+R +RGI+I
Sbjct: 340 NYRGTGIALEDLLQAGNLGVLEGAERFDHTRGYRFSTYVQYWIRKSMSKIVSRLARGIQI 399
Query: 191 PSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKIG 12
P TLS+A+ Q+ KARKAL SNG YPDD EIAK+TGLS+AKI SAS+CLRVVGSIDQKIG
Sbjct: 400 PCTLSRAIYQIQKARKALTTSNGKYPDDDEIAKYTGLSLAKIESASRCLRVVGSIDQKIG 459
Query: 11 D 9
+
Sbjct: 460 E 460
>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
Length = 534
Score = 181 bits (458), Expect = 1e-43
Identities = 85/121 (70%), Positives = 105/121 (86%)
Frame = -2
Query: 371 NYWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 192
NY GLG+ F DL+QAG VGVLQGAERFD TR YKFSTYVQYW+RKS+S +VARH+RGI+I
Sbjct: 314 NYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKI 373
Query: 191 PSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKIG 12
P L++ ++++ KARKAL S+G YP+D EIAK+TGLS+A+I SAS+CLR+VGSIDQKIG
Sbjct: 374 PCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIG 433
Query: 11 D 9
D
Sbjct: 434 D 434
>ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553990|gb|ESR64004.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 442
Score = 181 bits (458), Expect = 1e-43
Identities = 85/121 (70%), Positives = 105/121 (86%)
Frame = -2
Query: 371 NYWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 192
NY GLG+ F DL+QAG VGVLQGAERFD TR YKFSTYVQYW+RKS+S +VARH+RGI+I
Sbjct: 314 NYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKI 373
Query: 191 PSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKIG 12
P L++ ++++ KARKAL S+G YP+D EIAK+TGLS+A+I SAS+CLR+VGSIDQKIG
Sbjct: 374 PCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIG 433
Query: 11 D 9
D
Sbjct: 434 D 434
>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553989|gb|ESR64003.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 534
Score = 181 bits (458), Expect = 1e-43
Identities = 85/121 (70%), Positives = 105/121 (86%)
Frame = -2
Query: 371 NYWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 192
NY GLG+ F DL+QAG VGVLQGAERFD TR YKFSTYVQYW+RKS+S +VARH+RGI+I
Sbjct: 314 NYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKI 373
Query: 191 PSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKIG 12
P L++ ++++ KARKAL S+G YP+D EIAK+TGLS+A+I SAS+CLR+VGSIDQKIG
Sbjct: 374 PCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIG 433
Query: 11 D 9
D
Sbjct: 434 D 434
>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
gi|222854562|gb|EEE92109.1| hypothetical protein
POPTR_0006s25090g [Populus trichocarpa]
Length = 559
Score = 178 bits (452), Expect = 6e-43
Identities = 84/121 (69%), Positives = 103/121 (85%)
Frame = -2
Query: 371 NYWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 192
NY G+G+A EDLIQAG +G+LQGAERFD TR Y+FSTYVQYW+RKSM +V RH+RGI+I
Sbjct: 339 NYRGMGIAMEDLIQAGNLGLLQGAERFDPTRGYRFSTYVQYWIRKSMLKIVERHARGIQI 398
Query: 191 PSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKIG 12
P LS+++N++ KARKAL S+G YPDD E+AKFTGLS+AKI SA KCLRVV S+DQKIG
Sbjct: 399 PYALSRSINKIQKARKALSNSHGRYPDDWEVAKFTGLSLAKIESAQKCLRVVASLDQKIG 458
Query: 11 D 9
+
Sbjct: 459 E 459
>emb|CAD20832.1| sigma factor [Spinacia oleracea]
Length = 548
Score = 175 bits (443), Expect = 7e-42
Identities = 81/121 (66%), Positives = 101/121 (83%)
Frame = -2
Query: 368 YWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRIP 189
Y GLGVA EDL+QAG +G+LQGAERFD TR Y+FSTYVQYW+RK+MS LV+RH RGI++P
Sbjct: 330 YRGLGVAHEDLMQAGNIGILQGAERFDHTRGYQFSTYVQYWIRKAMSQLVSRHGRGIKVP 389
Query: 188 STLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKIGD 9
+TLS +N+V KARK L+RS G +PDD E++K TGLS+ KI SA CLR+VGS+DQK+G
Sbjct: 390 TTLSTTINRVQKARKILKRSQGKHPDDVEVSKSTGLSLDKIKSADNCLRIVGSLDQKVGH 449
Query: 8 F 6
F
Sbjct: 450 F 450
>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
subsp. vesca]
Length = 545
Score = 174 bits (442), Expect = 9e-42
Identities = 85/119 (71%), Positives = 103/119 (86%)
Frame = -2
Query: 371 NYWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 192
NY GLGVA +DL+QAG +G+LQGAERFD +R Y+FSTYVQYW+RKSMS LVA+H+RGI+I
Sbjct: 324 NYRGLGVALDDLLQAGNLGLLQGAERFDPSRGYRFSTYVQYWIRKSMSRLVAQHARGIKI 383
Query: 191 PSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKI 15
P+TLSKA+N++ KARKA S+ YPDD EIAK TGLS+AKI SAS+CLRVVGS+D KI
Sbjct: 384 PNTLSKAINRIQKARKANYNSHMKYPDDEEIAKITGLSLAKISSASRCLRVVGSVDHKI 442
>gb|EPS65656.1| hypothetical protein M569_09119, partial [Genlisea aurea]
Length = 463
Score = 172 bits (437), Expect = 3e-41
Identities = 80/121 (66%), Positives = 99/121 (81%)
Frame = -2
Query: 371 NYWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 192
NYWGLG+AFEDLIQAG + VL+GAERFDQ+R YKFSTYVQYW+RKSMS LVA HSRGIRI
Sbjct: 251 NYWGLGIAFEDLIQAGNMAVLRGAERFDQSRGYKFSTYVQYWIRKSMSMLVANHSRGIRI 310
Query: 191 PSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKIG 12
P T++K +NQV ARK L + G P D E+AK TG+S+ +I SA +C RVVGS+D+++G
Sbjct: 311 PGTMNKVINQVQNARKQLCAATGRTPSDLEVAKLTGISLERIRSAGRCPRVVGSVDRRVG 370
Query: 11 D 9
+
Sbjct: 371 N 371
>ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
gi|462419859|gb|EMJ24122.1| hypothetical protein
PRUPE_ppa003696mg [Prunus persica]
Length = 555
Score = 170 bits (431), Expect = 2e-40
Identities = 83/119 (69%), Positives = 101/119 (84%)
Frame = -2
Query: 371 NYWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 192
NY GLGVA +DL+QAG +G+LQGAERFD +R Y+FSTYVQYW+RKSMS LVA+H+RG++I
Sbjct: 335 NYRGLGVALDDLMQAGNLGLLQGAERFDHSRGYRFSTYVQYWIRKSMSRLVAQHARGVQI 394
Query: 191 PSTLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKI 15
P TLSKA+NQ+ KARKA S+ YPDD EIAK TGLS+A+I SAS CLRVVGS+D K+
Sbjct: 395 PFTLSKAINQIQKARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRVVGSVDHKM 453
>ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis thaliana]
gi|75098239|sp|O24621.1|SIGC_ARATH RecName: Full=RNA
polymerase sigma factor sigC; Short=Sigma factor C;
Short=Sigma-C; AltName: Full=RNA polymerase sigma factor
sig3; Short=Atsig3; Short=Sigma factor 3; Flags:
Precursor gi|2353175|gb|AAB69386.1| sigma factor 3
[Arabidopsis thaliana] gi|2463554|dbj|BAA22530.1| SigC
[Arabidopsis thaliana] gi|5478585|dbj|BAA82450.1| sigma
factor SigC [Arabidopsis thaliana]
gi|7630012|emb|CAB88354.1| sigma factor SigC
[Arabidopsis thaliana] gi|133778870|gb|ABO38775.1|
At3g53920 [Arabidopsis thaliana]
gi|332645638|gb|AEE79159.1| RNApolymerase sigma-subunit
C [Arabidopsis thaliana]
Length = 571
Score = 167 bits (422), Expect = 2e-39
Identities = 82/122 (67%), Positives = 101/122 (82%), Gaps = 1/122 (0%)
Frame = -2
Query: 371 NYWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 192
NY GLG+A EDLIQAG VGVLQGAERFD TR YKFSTYVQYW+RKSMST+V+RH+RG+ I
Sbjct: 350 NYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHI 409
Query: 191 PSTLSKAVNQVHKARKALRRSNG-TYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKI 15
PS++ + +N + KARK L+ S+G Y D EIAK TG SV KI +A++CL+VVGSID+K+
Sbjct: 410 PSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKV 469
Query: 14 GD 9
GD
Sbjct: 470 GD 471
>gb|AAM91534.1| sigma factor SigC [Arabidopsis thaliana]
Length = 291
Score = 167 bits (422), Expect = 2e-39
Identities = 82/122 (67%), Positives = 101/122 (82%), Gaps = 1/122 (0%)
Frame = -2
Query: 371 NYWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 192
NY GLG+A EDLIQAG VGVLQGAERFD TR YKFSTYVQYW+RKSMST+V+RH+RG+ I
Sbjct: 70 NYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHI 129
Query: 191 PSTLSKAVNQVHKARKALRRSNG-TYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKI 15
PS++ + +N + KARK L+ S+G Y D EIAK TG SV KI +A++CL+VVGSID+K+
Sbjct: 130 PSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKV 189
Query: 14 GD 9
GD
Sbjct: 190 GD 191
>dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
Length = 571
Score = 166 bits (420), Expect = 3e-39
Identities = 81/122 (66%), Positives = 101/122 (82%), Gaps = 1/122 (0%)
Frame = -2
Query: 371 NYWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 192
NY G+G+A EDLIQAG VGVLQGAERFD TR YKFSTYVQYW+RKSMST+V+RH+RG+ I
Sbjct: 350 NYRGMGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHI 409
Query: 191 PSTLSKAVNQVHKARKALRRSNG-TYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKI 15
PS++ + +N + KARK L+ S+G Y D EIAK TG SV KI +A++CL+VVGSID+K+
Sbjct: 410 PSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKV 469
Query: 14 GD 9
GD
Sbjct: 470 GD 471
>ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323785|gb|EFH54206.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 568
Score = 166 bits (420), Expect = 3e-39
Identities = 80/122 (65%), Positives = 102/122 (83%), Gaps = 1/122 (0%)
Frame = -2
Query: 371 NYWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 192
NY GLG+A EDLIQAG VGVLQGAERFD TR YKFSTYVQYW+RKSMS +V+RH+RG+ I
Sbjct: 347 NYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSMMVSRHARGVHI 406
Query: 191 PSTLSKAVNQVHKARKALRRSNG-TYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKI 15
PS++ + +NQ+ KARK L+ S+G YP D +I+K T LSV KI +A++CL+VVGSI++K+
Sbjct: 407 PSSIIRTINQIQKARKTLKTSHGIKYPADEDISKLTSLSVKKIRAANQCLKVVGSIEKKV 466
Query: 14 GD 9
GD
Sbjct: 467 GD 468
>ref|XP_006601060.1| PREDICTED: RNA polymerase sigma factor sigC isoform X3 [Glycine
max]
Length = 459
Score = 165 bits (418), Expect = 5e-39
Identities = 79/121 (65%), Positives = 101/121 (83%)
Frame = -2
Query: 368 YWGLGVAFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRIP 189
Y G+G+A +DL+QAG VGVLQGAERFD TR YKFSTYVQYW+RKS+ +VAR++RGI IP
Sbjct: 332 YRGMGIALDDLLQAGYVGVLQGAERFDSTRGYKFSTYVQYWIRKSILRVVARYARGIVIP 391
Query: 188 STLSKAVNQVHKARKALRRSNGTYPDDCEIAKFTGLSVAKIISASKCLRVVGSIDQKIGD 9
+L++A+NQ+ KARKA++ ++ PDD EIAK TGLS+ KI SAS CLR+V SIDQK+GD
Sbjct: 392 WSLNRAINQIQKARKAMKSTHKKCPDDYEIAKMTGLSLDKIKSASNCLRIVASIDQKVGD 451
Query: 8 F 6
+
Sbjct: 452 Y 452