BLASTX nr result

ID: Mentha25_contig00002281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00002281
         (460 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350536.1| PREDICTED: soluble starch synthase 1, chloro...    79   7e-13
ref|NP_001275074.1| soluble starch synthase 1, chloroplastic/amy...    79   7e-13
ref|XP_004234971.1| PREDICTED: soluble starch synthase 1, chloro...    78   1e-12

>ref|XP_006350536.1| PREDICTED: soluble starch synthase 1,
           chloroplastic/amyloplastic-like isoform X2 [Solanum
           tuberosum]
          Length = 641

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 51/119 (42%), Positives = 69/119 (57%), Gaps = 6/119 (5%)
 Frame = -1

Query: 340 IESRVVDCLSGVKQVG--FAHLLSGKR--KGRSLCVKARLYKEDKNAENKETDEGILLGT 173
           +  RVV  L   +QVG  F+ LL G+R  K +SLCV + +      AENK+  EG+LLG 
Sbjct: 18  VSGRVVRGLRVERQVGLGFSWLLKGRRNRKVQSLCVTSSVSDGSSIAENKKVSEGLLLGA 77

Query: 172 ARDGTGSVVGFNLIPHS--ANERVLETQQVEANRATKLSEEIXXXXXXXXXXTYNIVFV 2
            RDG+GSVVGF LIPHS   +  ++E+  + AN    LSE+           T+NI+FV
Sbjct: 78  ERDGSGSVVGFQLIPHSVAGDATMVESHDIVANDRDDLSEDTEEMEETPIKLTFNIIFV 136


>ref|NP_001275074.1| soluble starch synthase 1, chloroplastic/amyloplastic [Solanum
           tuberosum] gi|2829792|sp|P93568.1|SSY1_SOLTU RecName:
           Full=Soluble starch synthase 1,
           chloroplastic/amyloplastic; AltName: Full=Soluble starch
           synthase I; Short=SS I; Flags: Precursor
           gi|1781353|emb|CAA71442.1| soluble starch (bacterial
           glycogen) synthase [Solanum tuberosum]
          Length = 641

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 51/119 (42%), Positives = 68/119 (57%), Gaps = 6/119 (5%)
 Frame = -1

Query: 340 IESRVVDCLSGVKQVG--FAHLLSGKR--KGRSLCVKARLYKEDKNAENKETDEGILLGT 173
           +  RVV  L   +QVG  F+ LL G+R  K +SLCV + +      AENK   EG+LLG 
Sbjct: 18  VSGRVVKGLRVERQVGLGFSWLLKGRRNRKVQSLCVTSSVSDGSSIAENKNVSEGLLLGA 77

Query: 172 ARDGTGSVVGFNLIPHS--ANERVLETQQVEANRATKLSEEIXXXXXXXXXXTYNIVFV 2
            RDG+GSVVGF LIPHS   +  ++E+  + AN    LSE+           T+NI+FV
Sbjct: 78  ERDGSGSVVGFQLIPHSVAGDATMVESHDIVANDRDDLSEDTEEMEETPIKLTFNIIFV 136


>ref|XP_004234971.1| PREDICTED: soluble starch synthase 1,
           chloroplastic/amyloplastic-like [Solanum lycopersicum]
          Length = 641

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 56/143 (39%), Positives = 75/143 (52%), Gaps = 6/143 (4%)
 Frame = -1

Query: 412 SLRQPSTLMEALQIVPSRNIGIKLIESRVVDCLSGVKQVG--FAHLLSGKR--KGRSLCV 245
           SLR P+ L          N     +  RVV  L   +QVG  F+ LL G+R  K +SLCV
Sbjct: 3   SLRTPTNLS---------NKSCLCVSGRVVKGLRVERQVGLGFSWLLKGRRNRKVQSLCV 53

Query: 244 KARLYKEDKNAENKETDEGILLGTARDGTGSVVGFNLIPHS--ANERVLETQQVEANRAT 71
            + +      AENK+  EG+LLG  RDG+GSVVGF LIPHS   +  ++E+  + AN   
Sbjct: 54  TSSVSDGSSIAENKKVSEGLLLGPERDGSGSVVGFQLIPHSVAGDATMVESHDIVANDRD 113

Query: 70  KLSEEIXXXXXXXXXXTYNIVFV 2
            L E+           T+NI+FV
Sbjct: 114 DLREDAEEMEETPIKLTFNIIFV 136


Top