BLASTX nr result

ID: Mentha25_contig00002271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00002271
         (444 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350536.1| PREDICTED: soluble starch synthase 1, chloro...    80   4e-13
ref|NP_001275074.1| soluble starch synthase 1, chloroplastic/amy...    80   4e-13
ref|XP_004234971.1| PREDICTED: soluble starch synthase 1, chloro...    78   1e-12
ref|XP_002321996.2| hypothetical protein POPTR_0015s01470g [Popu...    60   2e-07

>ref|XP_006350536.1| PREDICTED: soluble starch synthase 1,
           chloroplastic/amyloplastic-like isoform X2 [Solanum
           tuberosum]
          Length = 641

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 50/119 (42%), Positives = 72/119 (60%), Gaps = 5/119 (4%)
 Frame = +1

Query: 103 IESRVVDCLSGVKQVGL--APLLSGKK-KGGRSLCVKARLYKEDKNAQNRETDEGILLGT 273
           +  RVV  L   +QVGL  + LL G++ +  +SLCV + +      A+N++  EG+LLG 
Sbjct: 18  VSGRVVRGLRVERQVGLGFSWLLKGRRNRKVQSLCVTSSVSDGSSIAENKKVSEGLLLGA 77

Query: 274 ERDGSGSVVGFNLIPHSV--NERVLETQQVEANGATKLSEEITSSDTILPVTTYNIVFV 444
           ERDGSGSVVGF LIPHSV  +  ++E+  + AN    LSE+    +      T+NI+FV
Sbjct: 78  ERDGSGSVVGFQLIPHSVAGDATMVESHDIVANDRDDLSEDTEEMEETPIKLTFNIIFV 136


>ref|NP_001275074.1| soluble starch synthase 1, chloroplastic/amyloplastic [Solanum
           tuberosum] gi|2829792|sp|P93568.1|SSY1_SOLTU RecName:
           Full=Soluble starch synthase 1,
           chloroplastic/amyloplastic; AltName: Full=Soluble starch
           synthase I; Short=SS I; Flags: Precursor
           gi|1781353|emb|CAA71442.1| soluble starch (bacterial
           glycogen) synthase [Solanum tuberosum]
          Length = 641

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 50/119 (42%), Positives = 71/119 (59%), Gaps = 5/119 (4%)
 Frame = +1

Query: 103 IESRVVDCLSGVKQVGL--APLLSGKK-KGGRSLCVKARLYKEDKNAQNRETDEGILLGT 273
           +  RVV  L   +QVGL  + LL G++ +  +SLCV + +      A+N+   EG+LLG 
Sbjct: 18  VSGRVVKGLRVERQVGLGFSWLLKGRRNRKVQSLCVTSSVSDGSSIAENKNVSEGLLLGA 77

Query: 274 ERDGSGSVVGFNLIPHSV--NERVLETQQVEANGATKLSEEITSSDTILPVTTYNIVFV 444
           ERDGSGSVVGF LIPHSV  +  ++E+  + AN    LSE+    +      T+NI+FV
Sbjct: 78  ERDGSGSVVGFQLIPHSVAGDATMVESHDIVANDRDDLSEDTEEMEETPIKLTFNIIFV 136


>ref|XP_004234971.1| PREDICTED: soluble starch synthase 1,
           chloroplastic/amyloplastic-like [Solanum lycopersicum]
          Length = 641

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 49/119 (41%), Positives = 71/119 (59%), Gaps = 5/119 (4%)
 Frame = +1

Query: 103 IESRVVDCLSGVKQVGL--APLLSGKK-KGGRSLCVKARLYKEDKNAQNRETDEGILLGT 273
           +  RVV  L   +QVGL  + LL G++ +  +SLCV + +      A+N++  EG+LLG 
Sbjct: 18  VSGRVVKGLRVERQVGLGFSWLLKGRRNRKVQSLCVTSSVSDGSSIAENKKVSEGLLLGP 77

Query: 274 ERDGSGSVVGFNLIPHSV--NERVLETQQVEANGATKLSEEITSSDTILPVTTYNIVFV 444
           ERDGSGSVVGF LIPHSV  +  ++E+  + AN    L E+    +      T+NI+FV
Sbjct: 78  ERDGSGSVVGFQLIPHSVAGDATMVESHDIVANDRDDLREDAEEMEETPIKLTFNIIFV 136


>ref|XP_002321996.2| hypothetical protein POPTR_0015s01470g [Populus trichocarpa]
           gi|550321737|gb|EEF06123.2| hypothetical protein
           POPTR_0015s01470g [Populus trichocarpa]
          Length = 649

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
 Frame = +1

Query: 235 QNRETDEGILLGTERDGSGSVVGFNLIPHS---VNERVLETQQVEANGATKLSEEITSSD 405
           + +E   G++LG ERD SGSV+GFNLIP S   ++  VLE+ +    G T+ +E+I   +
Sbjct: 72  EKKEKRGGLILGPERDSSGSVIGFNLIPPSGMDISFTVLESHEDATTGGTEEAEDIEGVE 131

Query: 406 TILPVTTYNIVFV 444
            +    TYNIVFV
Sbjct: 132 KVQTRVTYNIVFV 144


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