BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00002220
         (688 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS63634.1| hypothetical protein M569_11151 [Genlisea aurea]       272   7e-71
ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ri...   261   2e-67
ref|XP_004493418.1| PREDICTED: DNA-directed RNA polymerases I, I...   260   3e-67
ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citr...   256   4e-66
ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, I...   256   4e-66
ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V sub...   256   6e-66
ref|XP_007202529.1| hypothetical protein PRUPE_ppa010980mg [Prun...   256   6e-66
ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, I...   254   1e-65
ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III ...   254   2e-65
gb|AFK43162.1| unknown [Medicago truncatula]                          252   9e-65
ref|XP_007162116.1| hypothetical protein PHAVU_001G125200g [Phas...   251   2e-64
ref|XP_004230150.1| PREDICTED: DNA-directed RNA polymerases I, I...   250   3e-64
ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V sub...   248   1e-63
emb|CBI30093.3| unnamed protein product [Vitis vinifera]              247   2e-63
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I...   247   2e-63
ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycin...   247   3e-63
ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, I...   245   1e-62
ref|XP_007028544.1| Eukaryotic rpb5 RNA polymerase subunit famil...   243   6e-62
ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Popu...   241   2e-61
gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subun...   241   2e-61

>gb|EPS63634.1| hypothetical protein M569_11151 [Genlisea aurea]
          Length = 241

 Score =  272 bits (696), Expect = 7e-71
 Identities = 138/201 (68%), Positives = 162/201 (80%), Gaps = 12/201 (5%)
 Frame = +2

Query: 2   KTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPP 181
           KTL EML+DRGFA+   +++++LQEFRI+H + P VD L+I++LH DDPSIK LVLFC P
Sbjct: 41  KTLLEMLKDRGFAISPADIDITLQEFRIRHSESPSVDGLKITALHGDDPSIKVLVLFCGP 100

Query: 182 GIVKVNMVRGIISRIVQDG-LSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNIT 358
           GIVKVN +R I   +  +G +S L+LV Q KITSQALKAV +L +KVEIFQITDLLVNIT
Sbjct: 101 GIVKVNQIRAIAGDVYNNGTISSLILVAQSKITSQALKAVNILKFKVEIFQITDLLVNIT 160

Query: 359 KHELKPKHQVLTAKEKEDLLKQYCIEEKQ-----------LPRMLQKDAIARYYGLEKGQ 505
           KH+LKPKHQ+L+A+EK DLL +Y IEEKQ           LPRMLQKDAIARYYGLEKGQ
Sbjct: 161 KHDLKPKHQILSAEEKADLLSKYSIEEKQASKSKKASEAFLPRMLQKDAIARYYGLEKGQ 220

Query: 506 VVKVTYTGELTQLHVTYRCVW 568
           VVKVTY GELTQLHVTYRCVW
Sbjct: 221 VVKVTYGGELTQLHVTYRCVW 241


>ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
           gi|223531389|gb|EEF33224.1| DNA-directed RNA polymerase
           II, putative [Ricinus communis]
          Length = 238

 Score =  261 bits (667), Expect = 2e-67
 Identities = 127/190 (66%), Positives = 160/190 (84%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2   KTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPP 181
           +T+ EMLRDRG++VP+ E+++SLQEFR  HG  PD+D L+ S+ H  DPS + LVLF  P
Sbjct: 49  RTVLEMLRDRGYSVPSSEIDLSLQEFRAIHGPNPDIDRLKFSATHTSDPSKRMLVLFGGP 108

Query: 182 GIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNIT 358
           GI+KV+ +R I  +IV +D L+ L+LV+Q +IT+QA+KAV+L  +KVE+FQITDLLVNIT
Sbjct: 109 GIIKVSTIRAIAGQIVNKDSLTGLILVLQNQITNQAMKAVDLFKFKVEMFQITDLLVNIT 168

Query: 359 KHELKPKHQVLTAKEKEDLLKQYCIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELT 538
           KH LKPKHQVLT +EK+ LLK YCIEEKQLPR+L+KDAIARYYGLEKGQVVKVTY+GE+T
Sbjct: 169 KHVLKPKHQVLTDREKQKLLKDYCIEEKQLPRLLRKDAIARYYGLEKGQVVKVTYSGEIT 228

Query: 539 QLHVTYRCVW 568
           + HVTYRCVW
Sbjct: 229 ESHVTYRCVW 238


>ref|XP_004493418.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cicer arietinum]
          Length = 244

 Score =  260 bits (664), Expect = 3e-67
 Identities = 130/190 (68%), Positives = 159/190 (83%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2   KTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPP 181
           +T  EML+DRG+++P  E+++SL EFR  HG  PDVD LR ++ H  +PS + LV+F  P
Sbjct: 55  RTTLEMLKDRGYSIPPSEIQLSLHEFRQTHGHSPDVDRLRFTATHTTNPSKRILVIFSGP 114

Query: 182 GIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNIT 358
           GIVKVN+VR I  +IV +D L+ L+L+VQ +ITSQALKAV LL +KVEIFQITDLLVNIT
Sbjct: 115 GIVKVNVVRNIAGQIVNRDTLTGLILIVQSQITSQALKAVNLLSFKVEIFQITDLLVNIT 174

Query: 359 KHELKPKHQVLTAKEKEDLLKQYCIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELT 538
           KH LKPKHQVLT K+K++LLK+Y I+EKQLPRMLQ DAIARYYGLE+GQVVKVTYTGE+T
Sbjct: 175 KHVLKPKHQVLTDKQKKNLLKKYNIQEKQLPRMLQTDAIARYYGLERGQVVKVTYTGEIT 234

Query: 539 QLHVTYRCVW 568
           Q+HVTYRCVW
Sbjct: 235 QMHVTYRCVW 244


>ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citrus clementina]
           gi|568879109|ref|XP_006492520.1| PREDICTED: DNA-directed
           RNA polymerase V subunit 5A-like isoform X1 [Citrus
           sinensis] gi|557544341|gb|ESR55319.1| hypothetical
           protein CICLE_v10021999mg [Citrus clementina]
          Length = 236

 Score =  256 bits (655), Expect = 4e-66
 Identities = 129/190 (67%), Positives = 160/190 (84%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2   KTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPP 181
           +T+ EML+DRG+AV   E+ +S+Q+FR  +G  PDVD LRIS  H+ DPS + LV+FC P
Sbjct: 47  RTVLEMLKDRGYAVALSEINLSVQDFRAIYGQDPDVDRLRISISHQSDPSKRILVVFCGP 106

Query: 182 GIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNIT 358
           GIVKVN++R IIS+IV +D L+ L+L++Q +ITSQA KAV L  +KVE+FQITDLLVNIT
Sbjct: 107 GIVKVNVIRSIISQIVNRDTLTGLILILQNQITSQATKAVGLFQFKVEMFQITDLLVNIT 166

Query: 359 KHELKPKHQVLTAKEKEDLLKQYCIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELT 538
           KH LKPKHQVLT +EKE LLK+Y IEEKQLPRML+KDAIA+YYGLE+GQVVKVTY+GE+T
Sbjct: 167 KHVLKPKHQVLTDQEKEKLLKKYSIEEKQLPRMLKKDAIAQYYGLERGQVVKVTYSGEIT 226

Query: 539 QLHVTYRCVW 568
           + HVTYRCVW
Sbjct: 227 ESHVTYRCVW 236


>ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Solanum lycopersicum]
          Length = 227

 Score =  256 bits (655), Expect = 4e-66
 Identities = 122/190 (64%), Positives = 161/190 (84%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2   KTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPP 181
           +T+ EML+DRGFA+PN E++ +LQEFR K+G  PDV+ LR+S++H++D + K LV+FC P
Sbjct: 38  RTILEMLKDRGFAIPNSEIDTTLQEFREKYGQTPDVERLRVSAMHRNDLTNKVLVIFCGP 97

Query: 182 GIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNIT 358
             VKVN++R I+++I+ ++ LS+L+LV+Q ++T+ ALKAVEL  +KVEIFQITDLLVNIT
Sbjct: 98  NAVKVNVIRSILTQIMNKESLSRLILVIQNQMTNPALKAVELFSFKVEIFQITDLLVNIT 157

Query: 359 KHELKPKHQVLTAKEKEDLLKQYCIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELT 538
           KH LKP+H++LT  EKE LLK+Y +EEKQLPRM QKDAIARYYGLEKGQVVKVTY+ E+ 
Sbjct: 158 KHVLKPRHELLTDTEKEKLLKKYNLEEKQLPRMSQKDAIARYYGLEKGQVVKVTYSSEII 217

Query: 539 QLHVTYRCVW 568
           + HVTYRCVW
Sbjct: 218 ETHVTYRCVW 227


>ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
           tuberosum]
          Length = 227

 Score =  256 bits (653), Expect = 6e-66
 Identities = 121/190 (63%), Positives = 161/190 (84%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2   KTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPP 181
           +T+ EML+DRGFA+PN E++ +LQEFR K+G  PDV+ LR+S++H++D + K LV+FC P
Sbjct: 38  RTILEMLKDRGFAIPNSEIDTTLQEFREKYGQTPDVERLRVSAMHRNDLTNKVLVIFCGP 97

Query: 182 GIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNIT 358
             VKVN++R I+++I+ ++ LS+L+LV+Q ++T+ A+KAVEL  +KVEIFQITDLLVNIT
Sbjct: 98  NAVKVNVIRSILTQIMNKESLSRLILVIQNQMTNPAMKAVELFSFKVEIFQITDLLVNIT 157

Query: 359 KHELKPKHQVLTAKEKEDLLKQYCIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELT 538
           KH LKP+H++LT  EKE LLK+Y +EEKQLPRM QKDAIARYYGLEKGQVVKVTY+ E+ 
Sbjct: 158 KHVLKPRHELLTDTEKEKLLKKYNLEEKQLPRMSQKDAIARYYGLEKGQVVKVTYSSEII 217

Query: 539 QLHVTYRCVW 568
           + HVTYRCVW
Sbjct: 218 ETHVTYRCVW 227


>ref|XP_007202529.1| hypothetical protein PRUPE_ppa010980mg [Prunus persica]
           gi|462398060|gb|EMJ03728.1| hypothetical protein
           PRUPE_ppa010980mg [Prunus persica]
          Length = 228

 Score =  256 bits (653), Expect = 6e-66
 Identities = 121/190 (63%), Positives = 159/190 (83%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2   KTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPP 181
           +T+ EM+RDRG++VP+ E+++SLQ+FR  HG  PDV+ LR S+ H+ DPS + +V++C P
Sbjct: 39  RTVLEMIRDRGYSVPSSEIDLSLQDFRALHGQNPDVERLRFSATHRTDPSDRIMVIYCGP 98

Query: 182 GIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNIT 358
           GIVKVN++RG+ S+I  +D L+ L+L+ Q +ITSQALK +EL P+K EIFQITDLLVNIT
Sbjct: 99  GIVKVNVIRGLHSQIANKDTLNGLILITQNQITSQALKTMELYPFKTEIFQITDLLVNIT 158

Query: 359 KHELKPKHQVLTAKEKEDLLKQYCIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELT 538
           KH LKPKH VLT +EK+ LLK+Y IEE QLPR+ +KDAIA+YYGLEKGQVVKVTYTG++T
Sbjct: 159 KHVLKPKHHVLTEQEKQKLLKKYNIEENQLPRLSRKDAIAQYYGLEKGQVVKVTYTGDIT 218

Query: 539 QLHVTYRCVW 568
           + HVTYRC+W
Sbjct: 219 ESHVTYRCIW 228


>ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like isoform 1 [Fragaria vesca subsp. vesca]
          Length = 225

 Score =  254 bits (650), Expect = 1e-65
 Identities = 123/190 (64%), Positives = 161/190 (84%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2   KTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPP 181
           +T+ EMLRDRG++VP+ E+++SLQ+FR  HG  PD D L  S++H  DPS + LV++C P
Sbjct: 36  RTVLEMLRDRGYSVPSSEIDLSLQDFRSLHGQNPDADRLCFSTVHSSDPSERMLVIYCGP 95

Query: 182 GIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNIT 358
           GIVKVN++RG+ S+I  +D LS L+L++QG+ITSQALK ++L P+KVEIFQITDLLVNIT
Sbjct: 96  GIVKVNVIRGLHSQIANKDTLSGLILILQGQITSQALKTLDLYPFKVEIFQITDLLVNIT 155

Query: 359 KHELKPKHQVLTAKEKEDLLKQYCIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELT 538
           KH LKP+HQVLT + K+ LLK++ IEEKQLPR+ QKDAIA+YYGLE+GQVVKVTY+G++T
Sbjct: 156 KHVLKPQHQVLTEQAKQALLKKFNIEEKQLPRISQKDAIAKYYGLERGQVVKVTYSGDIT 215

Query: 539 QLHVTYRCVW 568
           + HVTYRCVW
Sbjct: 216 KGHVTYRCVW 225


>ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
           [Medicago truncatula] gi|124359979|gb|ABN07995.1| RNA
           polymerase subunit, RPB5; RNA polymerase Rpb5,
           N-terminal [Medicago truncatula]
           gi|355500048|gb|AES81251.1| DNA-directed RNA polymerases
           I, II, and III subunit RPABC1 [Medicago truncatula]
          Length = 248

 Score =  254 bits (649), Expect = 2e-65
 Identities = 126/190 (66%), Positives = 160/190 (84%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2   KTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPP 181
           +T+ EML+DRG+++P+ E+++SL +FR  HG  PDVD LR+++ H  +PS + LV+F  P
Sbjct: 59  RTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRLRLTATHATNPSKRILVVFSGP 118

Query: 182 GIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNIT 358
           GIVKVN VR I  +IV ++ L+ L+L+VQ +ITSQALKAV LL +KVEIFQITDLLVN T
Sbjct: 119 GIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKAVNLLSFKVEIFQITDLLVNAT 178

Query: 359 KHELKPKHQVLTAKEKEDLLKQYCIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELT 538
           KH LKPKHQVLT K+K++LLK+Y I+EKQLPRMLQ DAIARYYGL++GQVVKVTYTGE+T
Sbjct: 179 KHVLKPKHQVLTDKQKKNLLKKYDIQEKQLPRMLQTDAIARYYGLQRGQVVKVTYTGEIT 238

Query: 539 QLHVTYRCVW 568
           Q+HVTYRCVW
Sbjct: 239 QMHVTYRCVW 248


>gb|AFK43162.1| unknown [Medicago truncatula]
          Length = 248

 Score =  252 bits (643), Expect = 9e-65
 Identities = 125/190 (65%), Positives = 159/190 (83%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2   KTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPP 181
           +T+ EML+DRG+++P+ E+++SL +FR  HG  PDVD LR+++ H  +PS + LV+F  P
Sbjct: 59  RTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRLRLTATHATNPSKRILVVFSGP 118

Query: 182 GIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNIT 358
           GIVKVN VR I  +IV ++ L+ L+L+VQ +ITSQALKAV LL +KVEI QITDLLVN T
Sbjct: 119 GIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKAVNLLSFKVEILQITDLLVNAT 178

Query: 359 KHELKPKHQVLTAKEKEDLLKQYCIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELT 538
           KH LKPKHQVLT K+K++LLK+Y I+EKQLPRMLQ DAIARYYGL++GQVVKVTYTGE+T
Sbjct: 179 KHVLKPKHQVLTDKQKKNLLKKYDIQEKQLPRMLQTDAIARYYGLQRGQVVKVTYTGEIT 238

Query: 539 QLHVTYRCVW 568
           Q+HVTYRCVW
Sbjct: 239 QMHVTYRCVW 248


>ref|XP_007162116.1| hypothetical protein PHAVU_001G125200g [Phaseolus vulgaris]
           gi|561035580|gb|ESW34110.1| hypothetical protein
           PHAVU_001G125200g [Phaseolus vulgaris]
          Length = 242

 Score =  251 bits (641), Expect = 2e-64
 Identities = 123/190 (64%), Positives = 156/190 (82%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2   KTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPP 181
           +T  EML+DRG+++P+ E+++SL +FR  HG  PD D LR+S  H  +PS + LV+FC P
Sbjct: 53  RTTLEMLKDRGYSIPSNEIDLSLSQFRHMHGHSPDPDRLRLSLAHATNPSKRILVIFCGP 112

Query: 182 GIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNIT 358
           G+VKV  +R I  +IV +D LS L+L+V+  +TSQALKAV L  +KVEIFQITDLLVNIT
Sbjct: 113 GVVKVTAIRNIAGQIVNRDTLSGLILIVENHVTSQALKAVGLFSFKVEIFQITDLLVNIT 172

Query: 359 KHELKPKHQVLTAKEKEDLLKQYCIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELT 538
           KH LKPKHQVLT ++K++LLK++ IEEKQLPRMLQ DAIARYYGLE+GQVVKVTY+GE+T
Sbjct: 173 KHVLKPKHQVLTDRQKKNLLKKFNIEEKQLPRMLQTDAIARYYGLERGQVVKVTYSGEIT 232

Query: 539 QLHVTYRCVW 568
           Q+HVTYRCVW
Sbjct: 233 QMHVTYRCVW 242


>ref|XP_004230150.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Solanum lycopersicum]
          Length = 227

 Score =  250 bits (639), Expect = 3e-64
 Identities = 120/190 (63%), Positives = 155/190 (81%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2   KTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPP 181
           KT+ EML+DRGFA+PN E+E +LQEFR K+G  PDV+ LRIS++H+ D + K LV+FC P
Sbjct: 38  KTMLEMLKDRGFAIPNSEIETTLQEFREKYGQRPDVERLRISAMHRTDLTNKVLVIFCGP 97

Query: 182 GIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNIT 358
             VK+N++R I+S+I+ ++ LS+L+L+++  +T+ A+K VE  P+K EIFQITDLLVNIT
Sbjct: 98  NSVKMNVIRNILSQIMNKESLSRLILIIENPMTNPAMKVVEDSPFKTEIFQITDLLVNIT 157

Query: 359 KHELKPKHQVLTAKEKEDLLKQYCIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELT 538
           KH LKPKH++LT  EKE LLK+Y +EEKQLPRM QKDAIARYYGLEKGQVVKVTY  E+ 
Sbjct: 158 KHVLKPKHELLTNAEKEQLLKKYNLEEKQLPRMSQKDAIARYYGLEKGQVVKVTYNNEII 217

Query: 539 QLHVTYRCVW 568
           + H TYRCVW
Sbjct: 218 ETHATYRCVW 227


>ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
           tuberosum]
          Length = 227

 Score =  248 bits (633), Expect = 1e-63
 Identities = 118/190 (62%), Positives = 155/190 (81%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2   KTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPP 181
           KT+ EML+DRGFA+PN E++ +LQEFR K+G  PD + LRIS++H+ D + K LV+FC P
Sbjct: 38  KTMLEMLKDRGFAIPNSEIDTTLQEFREKYGQRPDAERLRISAMHRTDLTNKVLVIFCGP 97

Query: 182 GIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNIT 358
             VK+N++R I+S+I+ ++ LS+L+L+++  +T+ A+K VE  P+K EIFQITDLLVNIT
Sbjct: 98  NSVKMNVIRSILSQIMNKESLSRLILIIENPMTNPAMKVVEDSPFKTEIFQITDLLVNIT 157

Query: 359 KHELKPKHQVLTAKEKEDLLKQYCIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELT 538
           KH LKPKH++LT  EKE LLK+Y +E+KQLPRM QKDAIARYYGLEKGQVVKVTY  E+ 
Sbjct: 158 KHVLKPKHELLTNTEKEQLLKKYNLEDKQLPRMSQKDAIARYYGLEKGQVVKVTYNNEII 217

Query: 539 QLHVTYRCVW 568
           + HVTYRCVW
Sbjct: 218 ETHVTYRCVW 227


>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  247 bits (631), Expect = 2e-63
 Identities = 124/190 (65%), Positives = 153/190 (80%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2   KTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPP 181
           +TL EMLRDRG+++P  ++++SLQ+FR  +   PD D LRIS+  + DPS K LV+FC P
Sbjct: 141 RTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLRISAALRSDPSKKILVIFCGP 200

Query: 182 GIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNIT 358
            +VKVN +R I ++IV +D LSKL+LV+Q  ITSQALKAV+L  ++VE FQITDLLVNIT
Sbjct: 201 DVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAVDLFSFQVEKFQITDLLVNIT 260

Query: 359 KHELKPKHQVLTAKEKEDLLKQYCIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELT 538
           KH LKPKH+VLT +EK  LLK+Y + EKQLPRMLQ+DAIARYYGLEKGQVVKV Y GE+T
Sbjct: 261 KHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIARYYGLEKGQVVKVIYNGEIT 320

Query: 539 QLHVTYRCVW 568
             HVTYRCVW
Sbjct: 321 GSHVTYRCVW 330


>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Vitis vinifera]
          Length = 229

 Score =  247 bits (631), Expect = 2e-63
 Identities = 124/190 (65%), Positives = 153/190 (80%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2   KTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPP 181
           +TL EMLRDRG+++P  ++++SLQ+FR  +   PD D LRIS+  + DPS K LV+FC P
Sbjct: 40  RTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLRISAALRSDPSKKILVIFCGP 99

Query: 182 GIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNIT 358
            +VKVN +R I ++IV +D LSKL+LV+Q  ITSQALKAV+L  ++VE FQITDLLVNIT
Sbjct: 100 DVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAVDLFSFQVEKFQITDLLVNIT 159

Query: 359 KHELKPKHQVLTAKEKEDLLKQYCIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELT 538
           KH LKPKH+VLT +EK  LLK+Y + EKQLPRMLQ+DAIARYYGLEKGQVVKV Y GE+T
Sbjct: 160 KHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIARYYGLEKGQVVKVIYNGEIT 219

Query: 539 QLHVTYRCVW 568
             HVTYRCVW
Sbjct: 220 GSHVTYRCVW 229


>ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycine max]
           gi|255627335|gb|ACU14012.1| unknown [Glycine max]
          Length = 237

 Score =  247 bits (630), Expect = 3e-63
 Identities = 122/190 (64%), Positives = 153/190 (80%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2   KTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPP 181
           +T  EML+DRG+++P+ E+++SL +FR  HG  PD D LR+S  H  + S + LV+FC P
Sbjct: 48  RTTLEMLKDRGYSIPSHEIDLSLSDFRDIHGQFPDPDRLRLSLTHATNSSKRILVIFCGP 107

Query: 182 GIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNIT 358
           G+VKV  +R    +I+ +D L+ L+L+V+  ITSQALKAV L  +KVEIFQITDLLVNIT
Sbjct: 108 GVVKVTAIRNTAGQIINRDTLTGLILIVENHITSQALKAVNLFSFKVEIFQITDLLVNIT 167

Query: 359 KHELKPKHQVLTAKEKEDLLKQYCIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELT 538
           KH LKPKHQVLT K+K +LLK+Y IEEKQLPRMLQ DAIARYYGLE+GQVVKVTY+GE+T
Sbjct: 168 KHVLKPKHQVLTDKQKINLLKKYNIEEKQLPRMLQTDAIARYYGLERGQVVKVTYSGEVT 227

Query: 539 QLHVTYRCVW 568
           Q+HVTYRCVW
Sbjct: 228 QMHVTYRCVW 237


>ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
           gi|449524637|ref|XP_004169328.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1-like
           [Cucumis sativus]
          Length = 227

 Score =  245 bits (625), Expect = 1e-62
 Identities = 120/190 (63%), Positives = 150/190 (78%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2   KTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPP 181
           +T+ EML+DRG+ + +  ++ SLQ+FR   G  PDVD L++S+ H  DPS + LV+FC  
Sbjct: 38  RTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGT 97

Query: 182 GIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNIT 358
           G VKVN +R I  +I  +D L  L+L+VQ +IT+QA+KAVEL  +KVEIFQITDLLVNIT
Sbjct: 98  GAVKVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNIT 157

Query: 359 KHELKPKHQVLTAKEKEDLLKQYCIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELT 538
           KH LKP HQVLT +EK+ LLKQY IEEKQLPRML+ DAIARYYGLEKGQVVKVTY G++T
Sbjct: 158 KHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT 217

Query: 539 QLHVTYRCVW 568
           + H+TYRCVW
Sbjct: 218 RAHITYRCVW 227


>ref|XP_007028544.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao] gi|508717149|gb|EOY09046.1| Eukaryotic
           rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao]
          Length = 228

 Score =  243 bits (619), Expect = 6e-62
 Identities = 123/190 (64%), Positives = 153/190 (80%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2   KTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPP 181
           +T+ EMLRDRG+AVP  E+ +SLQEFR  +G  PD D LR+S+ HK DPS + LV+F  P
Sbjct: 39  RTVLEMLRDRGYAVPISEINLSLQEFRAIYGQSPDFDRLRLSATHKTDPSKRILVVFYGP 98

Query: 182 GIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNIT 358
           G+VKV+ +R I   I  ++ L+ L+LV+Q  IT+QALKA++L  +KVEIFQITDLLVNIT
Sbjct: 99  GMVKVSGIRLIAGLITNKESLTGLILVLQNHITNQALKALDLFSFKVEIFQITDLLVNIT 158

Query: 359 KHELKPKHQVLTAKEKEDLLKQYCIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELT 538
           KH LKPKHQVLT +EK+ LL++Y IEEKQLPR+L+KDAIARYYG E+GQVVKV Y GE+T
Sbjct: 159 KHVLKPKHQVLTEQEKQKLLQKYSIEEKQLPRLLKKDAIARYYGYERGQVVKVMYDGEIT 218

Query: 539 QLHVTYRCVW 568
           Q HVTYRCVW
Sbjct: 219 QSHVTYRCVW 228


>ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Populus trichocarpa]
           gi|550320761|gb|EEF05018.2| hypothetical protein
           POPTR_0016s03800g [Populus trichocarpa]
          Length = 243

 Score =  241 bits (615), Expect = 2e-61
 Identities = 116/190 (61%), Positives = 156/190 (82%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2   KTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPP 181
           +T+ EML+DRG++VP+ E+++SLQ+FR  +G  PD++ L+ S+ HK DPS + LV+FC  
Sbjct: 54  RTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPDIELLKFSATHKSDPSKRMLVIFCGL 113

Query: 182 GIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNIT 358
           G+VKV M+R I  +I  +D L+ L+LV+Q  IT+QA+KA++L  +K+EIFQITDLLVNIT
Sbjct: 114 GVVKVGMIRLITVQITDRDSLTGLILVLQNNITNQAMKALDLFKFKIEIFQITDLLVNIT 173

Query: 359 KHELKPKHQVLTAKEKEDLLKQYCIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELT 538
           KH LKPKHQVL+ + K+ LLK+Y IEEKQLPR+L+KDAI+RYYGLE+GQVVKVTY G++T
Sbjct: 174 KHILKPKHQVLSEQAKQRLLKKYSIEEKQLPRLLKKDAISRYYGLERGQVVKVTYDGDIT 233

Query: 539 QLHVTYRCVW 568
             HVTYRCVW
Sbjct: 234 GSHVTYRCVW 243


>gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
           notabilis]
          Length = 231

 Score =  241 bits (614), Expect = 2e-61
 Identities = 118/189 (62%), Positives = 153/189 (80%), Gaps = 1/189 (0%)
 Frame = +2

Query: 5   TLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPPG 184
           TL EML+DRG++VP+ ++ +SL +FR  +G +PDVD LR S  H  DPS + LV+FC PG
Sbjct: 43  TLLEMLKDRGYSVPSSDINLSLHDFRQIYGQIPDVDRLRFSVTHLSDPSKRILVIFCEPG 102

Query: 185 IVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNITK 361
           +VKV  VRGI  +IV ++ L+ L+LV+Q ++T+QA KAVELLP+KVEIFQITDLL+NITK
Sbjct: 103 VVKVTSVRGIAGQIVNRNTLTGLILVLQSQMTNQAQKAVELLPFKVEIFQITDLLINITK 162

Query: 362 HELKPKHQVLTAKEKEDLLKQYCIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQ 541
           H L+PKH+VLT +EK+ LLK+Y IE KQLPRM + DAIARYYGLEKGQVVK+ Y+G +T 
Sbjct: 163 HLLRPKHRVLTDQEKQKLLKKYSIEVKQLPRMSKNDAIARYYGLEKGQVVKIIYSGGITD 222

Query: 542 LHVTYRCVW 568
            ++TYRCVW
Sbjct: 223 SYITYRCVW 231