BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00000456
         (732 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Mimulus...   140   3e-31
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,...   129   8e-28
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c...   129   8e-28
gb|ABK25016.1| unknown [Picea sitchensis]                             125   2e-26
gb|ABK24573.1| unknown [Picea sitchensis]                             125   2e-26
gb|EPS60671.1| hypothetical protein M569_14131, partial [Genlise...   123   6e-26
ref|XP_006658862.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...   123   7e-26
ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [A...   123   7e-26
gb|EMT07115.1| 29 kDa ribonucleoprotein B, chloroplastic [Aegilo...   122   1e-25
gb|EMS60358.1| 31 kDa ribonucleoprotein, chloroplastic [Triticum...   122   1e-25
ref|XP_003632613.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   122   1e-25
dbj|BAJ87427.1| predicted protein [Hordeum vulgare subsp. vulgar...   122   1e-25
dbj|BAJ86609.1| predicted protein [Hordeum vulgare subsp. vulgare]    122   1e-25
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   122   1e-25
sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B,...   122   1e-25
ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th...   122   1e-25
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]    122   1e-25
ref|XP_007027347.1| RNA-binding family protein isoform 2 [Theobr...   122   2e-25
ref|XP_007027346.1| RNA-binding family protein isoform 1 [Theobr...   122   2e-25
ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...   122   2e-25

>gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Mimulus guttatus]
          Length = 309

 Score =  140 bits (354), Expect = 3e-31
 Identities = 67/83 (80%), Positives = 74/83 (89%)
 Frame = +1

Query: 199 GNTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNK 378
           GNTN++YVGNLSWGVDN ALE+LFSE G VQEARVVYDR+SGRSRGFGFVTYSS EEVN 
Sbjct: 224 GNTNRVYVGNLSWGVDNSALETLFSEQGQVQEARVVYDRESGRSRGFGFVTYSSPEEVNS 283

Query: 379 ACERLDGTNLDGRPIRVNPAEDR 447
           A E LDG +LDGR IRV+PAE+R
Sbjct: 284 AIEALDGADLDGRSIRVSPAEER 306



 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 39/74 (52%), Positives = 51/74 (68%)
 Frame = +1

Query: 211 KIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKACER 390
           K++VGNL + VD+ AL  LF + GNV+   V+YD+ SGRSRGFGFVT SS  E   A ++
Sbjct: 130 KLFVGNLPFNVDSAALAGLFEQAGNVEMVEVIYDKLSGRSRGFGFVTMSSLAEAEAAAQQ 189

Query: 391 LDGTNLDGRPIRVN 432
            +G  L GR +RVN
Sbjct: 190 FNGYELQGRALRVN 203


>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
           Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
           29kD A ribonucleoprotein [Nicotiana sylvestris]
          Length = 273

 Score =  129 bits (325), Expect = 8e-28
 Identities = 61/84 (72%), Positives = 73/84 (86%)
 Frame = +1

Query: 196 FGNTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVN 375
           F ++N++YVGNL+WGVD DALE+LFSE G V +A+VVYDRDSGRSRGFGFVTYSS+EEVN
Sbjct: 184 FDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVN 243

Query: 376 KACERLDGTNLDGRPIRVNPAEDR 447
            A E LDG +L+GR IRV+PAE R
Sbjct: 244 NAIESLDGVDLNGRAIRVSPAEAR 267



 Score = 89.7 bits (221), Expect = 9e-16
 Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
 Frame = +1

Query: 211 KIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKACER 390
           KI+VGNL +  D+ AL  LF   GNV+   V+YD+ +GRSRGFGFVT SS EEV  AC++
Sbjct: 88  KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 391 LDGTNLDGRPIRVN--PAEDRR*N 456
            +G  LDGR +RVN  P  ++R N
Sbjct: 148 FNGYELDGRALRVNSGPPPEKREN 171


>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
           Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
           RNA binding protein 30 [Nicotiana plumbaginifolia]
          Length = 279

 Score =  129 bits (325), Expect = 8e-28
 Identities = 61/84 (72%), Positives = 73/84 (86%)
 Frame = +1

Query: 196 FGNTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVN 375
           F ++N++YVGNL+WGVD DALE+LFSE G V +A+VVYDRDSGRSRGFGFVTYSS+EEVN
Sbjct: 190 FDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVN 249

Query: 376 KACERLDGTNLDGRPIRVNPAEDR 447
            A E LDG +L+GR IRV+PAE R
Sbjct: 250 NAIESLDGVDLNGRAIRVSPAEAR 273



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
 Frame = +1

Query: 211 KIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKACER 390
           KI+VGNL +  D+ AL  LF   GNV+   V+YD+ +GRSRGFGFVT SS EEV  AC++
Sbjct: 88  KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 391 LDGTNLDGRPIRVN--PAEDRR*N 456
            +G  LDGR +RVN  P  ++R N
Sbjct: 148 FNGYELDGRALRVNSGPPPEKREN 171


>gb|ABK25016.1| unknown [Picea sitchensis]
          Length = 290

 Score =  125 bits (314), Expect = 2e-26
 Identities = 60/83 (72%), Positives = 69/83 (83%)
 Frame = +1

Query: 202 NTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKA 381
           +TNKIYVGNL W  D+++L  LFSEHG V EARVVYDR++GRSRGFGFVTYSS  EVN A
Sbjct: 205 STNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDA 264

Query: 382 CERLDGTNLDGRPIRVNPAEDRR 450
              LDGT++DGRP+RVN AEDRR
Sbjct: 265 IAALDGTDMDGRPLRVNIAEDRR 287



 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 34/79 (43%), Positives = 48/79 (60%)
 Frame = +1

Query: 211 KIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKACER 390
           K++VGNL + +DN  L  LF   G V +  ++ DR++G SRGFGFVT  + EE  K  E 
Sbjct: 114 KLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEKGVEL 173

Query: 391 LDGTNLDGRPIRVNPAEDR 447
            +  +L+GR + VN A  R
Sbjct: 174 FNRHSLEGRLLTVNKAAPR 192


>gb|ABK24573.1| unknown [Picea sitchensis]
          Length = 290

 Score =  125 bits (314), Expect = 2e-26
 Identities = 60/83 (72%), Positives = 69/83 (83%)
 Frame = +1

Query: 202 NTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKA 381
           +TNKIYVGNL W  D+++L  LFSEHG V EARVVYDR++GRSRGFGFVTYSS  EVN A
Sbjct: 205 STNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDA 264

Query: 382 CERLDGTNLDGRPIRVNPAEDRR 450
              LDGT++DGRP+RVN AEDRR
Sbjct: 265 IAALDGTDMDGRPLRVNIAEDRR 287



 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 34/79 (43%), Positives = 48/79 (60%)
 Frame = +1

Query: 211 KIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKACER 390
           K++VGNL + +DN  L  LF   G V +  ++ DR++G SRGFGFVT  + EE  K  E 
Sbjct: 114 KLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEKGVEL 173

Query: 391 LDGTNLDGRPIRVNPAEDR 447
            +  +L+GR + VN A  R
Sbjct: 174 FNRHSLEGRLLTVNKAAPR 192


>gb|EPS60671.1| hypothetical protein M569_14131, partial [Genlisea aurea]
          Length = 213

 Score =  123 bits (309), Expect = 6e-26
 Identities = 58/82 (70%), Positives = 71/82 (86%)
 Frame = +1

Query: 202 NTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKA 381
           ++NK++VGNL+WGVD+ ALE+LFSE G+V+EA VVYDR+SGRSRGFGFVTY S EEVN A
Sbjct: 127 SSNKVHVGNLAWGVDDSALEALFSEQGDVKEATVVYDRESGRSRGFGFVTYGSREEVNNA 186

Query: 382 CERLDGTNLDGRPIRVNPAEDR 447
              LDGT+L+GRPIRV+ AE R
Sbjct: 187 IRSLDGTDLNGRPIRVSAAESR 208



 Score = 80.5 bits (197), Expect = 6e-13
 Identities = 37/74 (50%), Positives = 50/74 (67%)
 Frame = +1

Query: 211 KIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKACER 390
           K+YVGNL + VD+  L  LF + GNV+   V+YD++SGRSRGFGFVT S+  E   A ++
Sbjct: 36  KLYVGNLPFNVDSATLAGLFEQAGNVEMVEVIYDKESGRSRGFGFVTMSTIREAETAAQQ 95

Query: 391 LDGTNLDGRPIRVN 432
            +G    GR +RVN
Sbjct: 96  FNGYEYQGRALRVN 109


>ref|XP_006658862.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like, partial
           [Oryza brachyantha]
          Length = 211

 Score =  123 bits (308), Expect = 7e-26
 Identities = 57/84 (67%), Positives = 68/84 (80%)
 Frame = +1

Query: 196 FGNTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVN 375
           F ++NK+YVGNLSWGVDN  LE+LFSE GNV +A+V+YDR+SGRSRGFGFVTY S+EEV 
Sbjct: 123 FDSSNKVYVGNLSWGVDNSTLENLFSEQGNVLDAKVIYDRESGRSRGFGFVTYGSAEEVT 182

Query: 376 KACERLDGTNLDGRPIRVNPAEDR 447
            A   LDG +LDGR IRV  AE +
Sbjct: 183 NAISNLDGVDLDGRQIRVTVAESK 206



 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 45/87 (51%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
 Frame = +1

Query: 196 FGNTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVN 375
           F    K++VGNL + VD+  L  LF + G+V+   VVYDR +GRSRGFGFVT SSSEE  
Sbjct: 23  FAEDLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSSSEEAG 82

Query: 376 KACERLDGTNLDGRPIRVN----PAED 444
            A E+ +G    GRP+RVN    PA D
Sbjct: 83  AAVEQFNGYTFQGRPLRVNSGPPPARD 109


>ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [Amborella trichopoda]
           gi|548849631|gb|ERN08390.1| hypothetical protein
           AMTR_s00148p00072380 [Amborella trichopoda]
          Length = 272

 Score =  123 bits (308), Expect = 7e-26
 Identities = 58/82 (70%), Positives = 69/82 (84%)
 Frame = +1

Query: 196 FGNTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVN 375
           F + N++YVGNLSWGVD+ ALE+LFSE G V EA+VVYDR+SGRSRGFGFVTYS++EEV 
Sbjct: 184 FDSPNRVYVGNLSWGVDDLALENLFSEQGKVMEAKVVYDRESGRSRGFGFVTYSTAEEVT 243

Query: 376 KACERLDGTNLDGRPIRVNPAE 441
            A   L+G +LDGRPIRV PAE
Sbjct: 244 SAISTLNGADLDGRPIRVTPAE 265



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 4/82 (4%)
 Frame = +1

Query: 211 KIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKACER 390
           K++VGNL + VD+  L  LF + GNV+   V+YD+ +GRSRGFGFVT S+ EEV  A ++
Sbjct: 85  KLFVGNLPFSVDSARLAELFEQAGNVEMVEVIYDKQTGRSRGFGFVTMSTVEEVEAAVQQ 144

Query: 391 LDGTNLDGRPIRVN----PAED 444
            +G + +GR +RVN    PA D
Sbjct: 145 FNGHDFEGRQLRVNSGPPPARD 166


>gb|EMT07115.1| 29 kDa ribonucleoprotein B, chloroplastic [Aegilops tauschii]
          Length = 551

 Score =  122 bits (307), Expect = 1e-25
 Identities = 57/84 (67%), Positives = 67/84 (79%)
 Frame = +1

Query: 196 FGNTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVN 375
           F + NK+YVGNLSWGVDN  LE+LFSE G V +A+V+YDRDSGRSRGFGFVTY S++EVN
Sbjct: 461 FDSANKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVN 520

Query: 376 KACERLDGTNLDGRPIRVNPAEDR 447
            A   LDG +LDGR IRV  AE +
Sbjct: 521 NAISNLDGVDLDGRQIRVTVAESK 544



 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 40/74 (54%), Positives = 52/74 (70%)
 Frame = +1

Query: 211 KIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKACER 390
           K++VGNL + VD+  L  LF + G+V+   VVYDR +GRSRGFGFVT  S+EEV  A E+
Sbjct: 360 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSAEEVAAAVEQ 419

Query: 391 LDGTNLDGRPIRVN 432
            +G    GRP+RVN
Sbjct: 420 FNGYTFQGRPLRVN 433


>gb|EMS60358.1| 31 kDa ribonucleoprotein, chloroplastic [Triticum urartu]
          Length = 228

 Score =  122 bits (307), Expect = 1e-25
 Identities = 57/84 (67%), Positives = 67/84 (79%)
 Frame = +1

Query: 196 FGNTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVN 375
           F + NK+YVGNLSWGVDN  LE+LFSE G V +A+V+YDRDSGRSRGFGFVTY S++EVN
Sbjct: 138 FDSANKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVN 197

Query: 376 KACERLDGTNLDGRPIRVNPAEDR 447
            A   LDG +LDGR IRV  AE +
Sbjct: 198 NAISNLDGVDLDGRQIRVTVAESK 221


>ref|XP_003632613.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 2 [Vitis
           vinifera]
          Length = 254

 Score =  122 bits (307), Expect = 1e-25
 Identities = 59/82 (71%), Positives = 71/82 (86%)
 Frame = +1

Query: 202 NTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKA 381
           +TN+IYVGNLSWGVD+ ALE+LFSE G V EARV+YDR++GRSRGFGFVTY+S+EEVN+A
Sbjct: 168 STNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRA 227

Query: 382 CERLDGTNLDGRPIRVNPAEDR 447
            E LDG +L+GR IRV  AE R
Sbjct: 228 IESLDGVDLNGRSIRVTMAEAR 249


>dbj|BAJ87427.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326510771|dbj|BAJ91733.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 278

 Score =  122 bits (307), Expect = 1e-25
 Identities = 57/84 (67%), Positives = 67/84 (79%)
 Frame = +1

Query: 196 FGNTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVN 375
           F + NK+YVGNLSWGVDN  LE+LFSE G V +A+V+YDRDSGRSRGFGFVTY S++EVN
Sbjct: 188 FDSANKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVN 247

Query: 376 KACERLDGTNLDGRPIRVNPAEDR 447
            A   LDG +LDGR IRV  AE +
Sbjct: 248 NAISNLDGVDLDGRQIRVTVAESK 271



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 40/74 (54%), Positives = 51/74 (68%)
 Frame = +1

Query: 211 KIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKACER 390
           K++VGNL + VD+  L  LF + G+V+   VVYDR +GRSRGFGFVT  S EEV  A E+
Sbjct: 88  KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 147

Query: 391 LDGTNLDGRPIRVN 432
            +G    GRP+RVN
Sbjct: 148 FNGYTFQGRPLRVN 161


>dbj|BAJ86609.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 100

 Score =  122 bits (307), Expect = 1e-25
 Identities = 57/84 (67%), Positives = 67/84 (79%)
 Frame = +1

Query: 196 FGNTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVN 375
           F + NK+YVGNLSWGVDN  LE+LFSE G V +A+V+YDRDSGRSRGFGFVTY S++EVN
Sbjct: 10  FDSANKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVN 69

Query: 376 KACERLDGTNLDGRPIRVNPAEDR 447
            A   LDG +LDGR IRV  AE +
Sbjct: 70  NAISNLDGVDLDGRQIRVTVAESK 93


>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 288

 Score =  122 bits (307), Expect = 1e-25
 Identities = 59/82 (71%), Positives = 71/82 (86%)
 Frame = +1

Query: 202 NTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKA 381
           +TN+IYVGNLSWGVD+ ALE+LFSE G V EARV+YDR++GRSRGFGFVTY+S+EEVN+A
Sbjct: 202 STNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRA 261

Query: 382 CERLDGTNLDGRPIRVNPAEDR 447
            E LDG +L+GR IRV  AE R
Sbjct: 262 IESLDGVDLNGRSIRVTMAEAR 283



 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 42/84 (50%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
 Frame = +1

Query: 211 KIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKACER 390
           K++VGNL + VD+  L  LF + GNV+   V+YD+ +GRSRGFGFVT S+ EEV  A ++
Sbjct: 91  KLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQ 150

Query: 391 LDGTNLDGRPIRVN--PAEDRR*N 456
            +G  L+GR +RVN  P   RR N
Sbjct: 151 FNGYELEGRQLRVNSGPPPARREN 174


>sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
           Full=CP29B; Flags: Precursor gi|14135|emb|CAA43428.1|
           29kD B ribonucleoprotein [Nicotiana sylvestris]
          Length = 291

 Score =  122 bits (306), Expect = 1e-25
 Identities = 58/82 (70%), Positives = 72/82 (87%)
 Frame = +1

Query: 202 NTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKA 381
           ++N++YVGNLSWGVD+ AL+ LFSE GNV +A+VVYDRDSGRSRGFGFVTYSSS+EVN A
Sbjct: 205 SSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDA 264

Query: 382 CERLDGTNLDGRPIRVNPAEDR 447
            + L+G +LDGR IRV+ AE+R
Sbjct: 265 IDSLNGVDLDGRSIRVSAAEER 286



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
 Frame = +1

Query: 196 FGNTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVN 375
           F    K++VGNL + VD+ AL  LF   GNV+   V+YD+ +GRSRGFGFVT S+ EEV 
Sbjct: 83  FSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVE 142

Query: 376 KACERLDGTNLDGRPIRVN--PAEDRR*N 456
            A ++ +G  +DGR IRVN  PA  +R N
Sbjct: 143 AAEQQFNGYEIDGRAIRVNAGPAPAKREN 171


>ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana]
           gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName:
           Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
           Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative
           RNA-binding protein [Arabidopsis thaliana]
           gi|4056477|gb|AAC98043.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|15081717|gb|AAK82513.1|
           At2g37220/F3G5.1 [Arabidopsis thaliana]
           gi|16323482|gb|AAL15235.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|20197716|gb|AAM15222.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|330254275|gb|AEC09369.1| chloroplast RNA binding
           protein [Arabidopsis thaliana]
          Length = 289

 Score =  122 bits (306), Expect = 1e-25
 Identities = 59/83 (71%), Positives = 69/83 (83%)
 Frame = +1

Query: 199 GNTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNK 378
           G+ N++YVGNLSWGVD+ ALESLFSE G V EARV+YDRDSGRS+GFGFVTY SS+EV  
Sbjct: 201 GSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQN 260

Query: 379 ACERLDGTNLDGRPIRVNPAEDR 447
           A + LDG +LDGR IRV+ AE R
Sbjct: 261 AIKSLDGADLDGRQIRVSEAEAR 283



 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 40/74 (54%), Positives = 52/74 (70%)
 Frame = +1

Query: 211 KIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKACER 390
           K++VGNL + VD+  L  LF   GNV+   V+YD+ +GRSRGFGFVT SS  EV  A ++
Sbjct: 92  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151

Query: 391 LDGTNLDGRPIRVN 432
            +G  LDGRP+RVN
Sbjct: 152 FNGYELDGRPLRVN 165


>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
          Length = 289

 Score =  122 bits (306), Expect = 1e-25
 Identities = 59/83 (71%), Positives = 69/83 (83%)
 Frame = +1

Query: 199 GNTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNK 378
           G+ N++YVGNLSWGVD+ ALESLFSE G V EARV+YDRDSGRS+GFGFVTY SS+EV  
Sbjct: 201 GSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQN 260

Query: 379 ACERLDGTNLDGRPIRVNPAEDR 447
           A + LDG +LDGR IRV+ AE R
Sbjct: 261 AIKSLDGADLDGRQIRVSEAEAR 283



 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 40/74 (54%), Positives = 52/74 (70%)
 Frame = +1

Query: 211 KIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKACER 390
           K++VGNL + VD+  L  LF   GNV+   V+YD+ +GRSRGFGFVT SS  EV  A ++
Sbjct: 92  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151

Query: 391 LDGTNLDGRPIRVN 432
            +G  LDGRP+RVN
Sbjct: 152 FNGYELDGRPLRVN 165


>ref|XP_007027347.1| RNA-binding family protein isoform 2 [Theobroma cacao]
           gi|508715952|gb|EOY07849.1| RNA-binding family protein
           isoform 2 [Theobroma cacao]
          Length = 157

 Score =  122 bits (305), Expect = 2e-25
 Identities = 58/83 (69%), Positives = 72/83 (86%)
 Frame = +1

Query: 199 GNTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNK 378
           G +N++YVGNLSWGVD+ ALE+LFSE G V EA+VVYDR+SGRSRGFGFVTY+S+EEV+ 
Sbjct: 70  GASNRVYVGNLSWGVDDLALETLFSEQGKVVEAKVVYDRESGRSRGFGFVTYNSAEEVDS 129

Query: 379 ACERLDGTNLDGRPIRVNPAEDR 447
           A + L+G +LDGRPIRV+ AE R
Sbjct: 130 AIKSLNGVDLDGRPIRVSVAESR 152



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
 Frame = +1

Query: 301 VVYDRDSGRSRGFGFVTYSSSEEVNKACERLDGTNLDGRPIRVN--PAEDRR 450
           V+YD+ +GRSRGFGFVT S++EEV  A ++ +G  L+GR +RVN  P   RR
Sbjct: 4   VIYDKVTGRSRGFGFVTMSTAEEVEAAAQQFNGYELEGRALRVNSGPPPPRR 55


>ref|XP_007027346.1| RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|508715951|gb|EOY07848.1| RNA-binding family protein
           isoform 1 [Theobroma cacao]
          Length = 254

 Score =  122 bits (305), Expect = 2e-25
 Identities = 58/83 (69%), Positives = 72/83 (86%)
 Frame = +1

Query: 199 GNTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNK 378
           G +N++YVGNLSWGVD+ ALE+LFSE G V EA+VVYDR+SGRSRGFGFVTY+S+EEV+ 
Sbjct: 167 GASNRVYVGNLSWGVDDLALETLFSEQGKVVEAKVVYDRESGRSRGFGFVTYNSAEEVDS 226

Query: 379 ACERLDGTNLDGRPIRVNPAEDR 447
           A + L+G +LDGRPIRV+ AE R
Sbjct: 227 AIKSLNGVDLDGRPIRVSVAESR 249



 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
 Frame = +1

Query: 280 GNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKACERLDGTNLDGRPIRVN--PAEDRR 450
           GNV+   V+YD+ +GRSRGFGFVT S++EEV  A ++ +G  L+GR +RVN  P   RR
Sbjct: 94  GNVEMVEVIYDKVTGRSRGFGFVTMSTAEEVEAAAQQFNGYELEGRALRVNSGPPPPRR 152


>ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
           [Brachypodium distachyon]
          Length = 275

 Score =  122 bits (305), Expect = 2e-25
 Identities = 57/84 (67%), Positives = 67/84 (79%)
 Frame = +1

Query: 196 FGNTNKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVN 375
           F + NK+YVGNLSWGVDN  LE+LFSE G V +A+V+YDRDSGRSRGFGFVTY S++EVN
Sbjct: 185 FDSGNKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVN 244

Query: 376 KACERLDGTNLDGRPIRVNPAEDR 447
            A   LDG +LDGR IRV  AE +
Sbjct: 245 NAISNLDGVDLDGRQIRVTVAESK 268



 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 40/74 (54%), Positives = 54/74 (72%)
 Frame = +1

Query: 211 KIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSEEVNKACER 390
           K++VGNL + VD+  L  LF + G+V+   VVYDR +GRSRGFGFVT S++EEV+ A E+
Sbjct: 85  KLFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSTAEEVSAAVEQ 144

Query: 391 LDGTNLDGRPIRVN 432
            +G    GRP+RVN
Sbjct: 145 FNGYTFQGRPLRVN 158