BLASTX nr result
ID: Mentha24_contig00047910
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00047910
(671 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU30611.1| hypothetical protein MIMGU_mgv1a020771mg [Mimulus... 322 5e-86
ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi... 300 2e-79
gb|EXB82495.1| hypothetical protein L484_027670 [Morus notabilis] 283 3e-74
ref|XP_007044848.1| Pentatricopeptide repeat superfamily protein... 277 2e-72
ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containi... 277 3e-72
ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containi... 276 4e-72
ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containi... 275 7e-72
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,... 273 4e-71
ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containi... 270 3e-70
ref|XP_002312667.1| pentatricopeptide repeat-containing family p... 269 7e-70
ref|XP_007159689.1| hypothetical protein PHAVU_002G258900g [Phas... 268 9e-70
ref|XP_007227261.1| hypothetical protein PRUPE_ppa017811mg [Prun... 268 9e-70
ref|XP_004504137.1| PREDICTED: pentatricopeptide repeat-containi... 265 1e-68
ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containi... 260 3e-67
ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citr... 260 3e-67
ref|XP_006417164.1| hypothetical protein EUTSA_v10007381mg [Eutr... 258 1e-66
ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containi... 253 4e-65
ref|XP_002889980.1| pentatricopeptide repeat-containing protein ... 246 4e-63
ref|XP_006304861.1| hypothetical protein CARUB_v10012598mg [Caps... 243 3e-62
ref|NP_172763.1| pentatricopeptide repeat-containing protein [Ar... 243 5e-62
>gb|EYU30611.1| hypothetical protein MIMGU_mgv1a020771mg [Mimulus guttatus]
Length = 515
Score = 322 bits (826), Expect = 5e-86
Identities = 154/210 (73%), Positives = 185/210 (88%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
VDKAY++LV+KME KG DVVSYNTI++ALCK+G + +AYKL EMGRKG++PDV+TFTI
Sbjct: 305 VDKAYLLLVDKMEAKGFVDVVSYNTIVSALCKAGRSGEAYKLLGEMGRKGVAPDVITFTI 364
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
LID+FLK+GNS++AK LLDQMTK+ LFPSL LYTTI+DHLCKTGRI A GIFHDMVE G
Sbjct: 365 LIDAFLKKGNSVIAKDLLDQMTKMNLFPSLELYTTIVDHLCKTGRIKAARGIFHDMVEQG 424
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
I PDV+SYNALI G C+ ++V+EALHLF++MQ+ GV PDEVT+KLIIRGLIKEKK+ LAC
Sbjct: 425 IRPDVVSYNALICGCCRAFEVSEALHLFEQMQSSGVHPDEVTFKLIIRGLIKEKKLPLAC 484
Query: 543 EVWDEMMKNGFTLDSYLSETLIRAINSKEI 632
+WD+MM+ GFTLDSY SETLI AINSKE+
Sbjct: 485 GMWDQMMEKGFTLDSYSSETLIDAINSKEV 514
Score = 84.0 bits (206), Expect = 4e-14
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 3/208 (1%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
VD A +L E DVVSY +I+ C+ +A +L++ M +KG++PD
Sbjct: 130 VDDALKILGLMGEKGREPDVVSYTIMISGFCRIKLYDEAIELWKVMIKKGLNPDNEACRA 189
Query: 183 LIDSFLKEGNSIVAKSLL--DQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVE 356
L+ G +A L D K+ ++V+Y +I C+ GRI+ A I + M
Sbjct: 190 LVLGLCDSGKVDLAYELTVGDMREKVSF--NVVIYNALICGFCRVGRIDKALAIKNFMRR 247
Query: 357 HGIVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISL 536
+G PD++++N L+ C + EA L KM+ G+ PD +Y +++GL K ++
Sbjct: 248 NGCEPDLVTHNVLLNYCCNALMLEEAHKLIAKMERSGMEPDIYSYNELLKGLCKASRVDK 307
Query: 537 A-CEVWDEMMKNGFTLDSYLSETLIRAI 617
A + D+M GF +D T++ A+
Sbjct: 308 AYLLLVDKMEAKGF-VDVVSYNTIVSAL 334
Score = 81.3 bits (199), Expect = 3e-13
Identities = 51/187 (27%), Positives = 94/187 (50%)
Frame = +3
Query: 57 DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLL 236
D+ ++N + LC A K+ MG KG PDVV++TI+I F + A L
Sbjct: 113 DIWAFNIYMYLLCSESLVDDALKILGLMGEKGREPDVVSYTIMISGFCRIKLYDEAIELW 172
Query: 237 DQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKT 416
M K GL P ++ LC +G++++A+ + + + +V+ YNALI G+C+
Sbjct: 173 KVMIKKGLNPDNEACRALVLGLCDSGKVDLAYELTVGDMREKVSFNVVIYNALICGFCRV 232
Query: 417 YQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLS 596
++++AL + M+ G PD VT+ +++ + A ++ +M ++G D Y
Sbjct: 233 GRIDKALAIKNFMRRNGCEPDLVTHNVLLNYCCNALMLEEAHKLIAKMERSGMEPDIYSY 292
Query: 597 ETLIRAI 617
L++ +
Sbjct: 293 NELLKGL 299
Score = 80.9 bits (198), Expect = 3e-13
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 2/196 (1%)
Frame = +3
Query: 45 KGL-ADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIV 221
KGL D + ++ LC SG AY+L R+ +S +VV + LI F + G
Sbjct: 178 KGLNPDNEACRALVLGLCDSGKVDLAYELTVGDMREKVSFNVVIYNALICGFCRVGRIDK 237
Query: 222 AKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIG 401
A ++ + M + G P LV + ++++ C + AH + M G+ PD+ SYN L+
Sbjct: 238 ALAIKNFMRRNGCEPDLVTHNVLLNYCCNALMLEEAHKLIAKMERSGMEPDIYSYNELLK 297
Query: 402 GYCKTYQVNEA-LHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFT 578
G CK +V++A L L KM+ G D V+Y I+ L K + A ++ EM + G
Sbjct: 298 GLCKASRVDKAYLLLVDKMEAKGFV-DVVSYNTIVSALCKAGRSGEAYKLLGEMGRKGVA 356
Query: 579 LDSYLSETLIRAINSK 626
D LI A K
Sbjct: 357 PDVITFTILIDAFLKK 372
Score = 73.2 bits (178), Expect = 7e-11
Identities = 48/182 (26%), Positives = 82/182 (45%)
Frame = +3
Query: 63 VSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQ 242
V YN + L K+ + +E + KG S + T++ I + N + L
Sbjct: 45 VDYNRFLGVLIKNQRFGLSEYYYESLNSKGFSLNSFTYSRFISGLCELRNFELISRLFAD 104
Query: 243 MTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQ 422
M +G+ P + + + LC ++ A I M E G PDV+SY +I G+C+
Sbjct: 105 MDSLGIVPDIWAFNIYMYLLCSESLVDDALKILGLMGEKGREPDVVSYTIMISGFCRIKL 164
Query: 423 VNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSET 602
+EA+ L+K M G+ PD + ++ GL K+ LA E+ M+ + + +
Sbjct: 165 YDEAIELWKVMIKKGLNPDNEACRALVLGLCDSGKVDLAYELTVGDMREKVSFNVVIYNA 224
Query: 603 LI 608
LI
Sbjct: 225 LI 226
Score = 69.7 bits (169), Expect = 8e-10
Identities = 45/180 (25%), Positives = 81/180 (45%)
Frame = +3
Query: 69 YNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQMT 248
Y + I + K+G +A ++F+EM + V + + +K +++ + +
Sbjct: 12 YRSRIASYVKAGLIDQAIQVFDEMSQSDCRMFSVDYNRFLGVLIKNQRFGLSEYYYESLN 71
Query: 249 KIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVN 428
G + Y+ I LC+ + +F DM GIVPD+ ++N + C V+
Sbjct: 72 SKGFSLNSFTYSRFISGLCELRNFELISRLFADMDSLGIVPDIWAFNIYMYLLCSESLVD 131
Query: 429 EALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSETLI 608
+AL + M G PD V+Y ++I G + K A E+W M+K G D+ L+
Sbjct: 132 DALKILGLMGEKGREPDVVSYTIMISGFCRIKLYDEAIELWKVMIKKGLNPDNEACRALV 191
>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product
[Vitis vinifera]
Length = 519
Score = 300 bits (769), Expect = 2e-79
Identities = 143/209 (68%), Positives = 174/209 (83%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
+DKAYMM+VNKME KGL DVVSYNTII ALC + ++AYKLFEEMG KGI+PDVVTFTI
Sbjct: 305 LDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTI 364
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
LI +FL+EG+S +AK LLDQMT +GL P VLYTTI+DHLCKTG++ MAH +F DMVE G
Sbjct: 365 LIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESG 424
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
I PDV+SYNALI G C+ +V+EA+HL++ M TGG CPDEVT+KLII GLI EKK+S+AC
Sbjct: 425 ITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVAC 484
Query: 543 EVWDEMMKNGFTLDSYLSETLIRAINSKE 629
VWD+MM+ GFTLD +SETL+ AI+S +
Sbjct: 485 RVWDQMMEKGFTLDGAVSETLVNAIHSND 513
Score = 105 bits (261), Expect = 2e-20
Identities = 59/202 (29%), Positives = 105/202 (51%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
VD AY + V M + YN++I C++G KA + M R G PD+VT+ +
Sbjct: 200 VDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNV 259
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
L++ E A++L+ +M + G+ P + Y ++ LCK R++ A+ + + +E
Sbjct: 260 LLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAK 319
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
+ DV+SYN +I C A LF++M G+ PD VT+ ++I+ ++E ++A
Sbjct: 320 GLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAK 379
Query: 543 EVWDEMMKNGFTLDSYLSETLI 608
++ D+M G D L T++
Sbjct: 380 KLLDQMTGLGLLPDRVLYTTIV 401
Score = 93.2 bits (230), Expect = 7e-17
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 1/199 (0%)
Frame = +3
Query: 24 LVNKMEVKGLA-DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFL 200
+V M KG D+V+Y +I LC++G A +++ M RKG SPD L+
Sbjct: 136 VVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLC 195
Query: 201 KEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVI 380
+G +A L + + S +Y ++I+ C+ G I+ A I M +G PD++
Sbjct: 196 HDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLV 255
Query: 381 SYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEM 560
+YN L+ C + EA +L KKM+ GV PD +Y +++GL K ++ A +
Sbjct: 256 TYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNK 315
Query: 561 MKNGFTLDSYLSETLIRAI 617
M+ D T+I+A+
Sbjct: 316 MEAKGLCDVVSYNTIIKAL 334
Score = 89.0 bits (219), Expect = 1e-15
Identities = 47/182 (25%), Positives = 90/182 (49%)
Frame = +3
Query: 63 VSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQ 242
+ YN I L + A + ++ M +G S + T++ I K N ++ + LL+
Sbjct: 45 IDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLED 104
Query: 243 MTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQ 422
M ++G P + Y ++ LC ++++A G+ MVE G PD+++Y +I G C+ +
Sbjct: 105 MDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGR 164
Query: 423 VNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSET 602
+ A+ +++ M G PDE + ++ GL + K+ LA E+ M+ + +
Sbjct: 165 FDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNS 224
Query: 603 LI 608
LI
Sbjct: 225 LI 226
Score = 82.8 bits (203), Expect = 9e-14
Identities = 49/182 (26%), Positives = 85/182 (46%)
Frame = +3
Query: 63 VSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQ 242
++Y I++ K+G +A K F+EM + + + I +++ +A+ D+
Sbjct: 10 LAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDR 69
Query: 243 MTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQ 422
M G + Y+ I LCK + + DM G VPD+ +YN + C Q
Sbjct: 70 MIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQ 129
Query: 423 VNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSET 602
++ AL + + M G PD VTY ++I GL + + A E+W M++ GF+ D
Sbjct: 130 LDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRA 189
Query: 603 LI 608
L+
Sbjct: 190 LV 191
Score = 81.3 bits (199), Expect = 3e-13
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 35/219 (15%)
Frame = +3
Query: 66 SYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQM 245
+Y+ I+ LCK KL E+M R G PD+ + I ++ E VA ++ M
Sbjct: 81 TYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTM 140
Query: 246 TKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVIS-------------- 383
+ G P +V YT +I+ LC+ GR + A I+ +MV G PD +
Sbjct: 141 VEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKV 200
Query: 384 ---------------------YNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLI 500
YN+LI G+C+ +++A + M+ G PD VTY ++
Sbjct: 201 DLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVL 260
Query: 501 IRGLIKEKKISLACEVWDEMMKNGFTLDSYLSETLIRAI 617
+ E + A + +M ++G D Y L++ +
Sbjct: 261 LNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGL 299
>gb|EXB82495.1| hypothetical protein L484_027670 [Morus notabilis]
Length = 513
Score = 283 bits (725), Expect = 3e-74
Identities = 138/208 (66%), Positives = 168/208 (80%)
Frame = +3
Query: 6 DKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTIL 185
DKAY+++V+ ME KGLA+VVSYNTII A CK R+AY+LFEEM +KGI PDVVTFTIL
Sbjct: 306 DKAYLLMVDSMESKGLANVVSYNTIIGAFCKLLRVRRAYQLFEEMRQKGIEPDVVTFTIL 365
Query: 186 IDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGI 365
I +FL G+S VAK LLDQMT +GL P + YT I+DHLCK G+I MAH +F DMVE GI
Sbjct: 366 IKAFLSVGSSDVAKRLLDQMTGMGLLPDCLFYTIIVDHLCKAGKIGMAHSVFSDMVERGI 425
Query: 366 VPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACE 545
PDVISYNA+I G CK ++V+EA+HL+++MQ G+CPDEVT+KLII GLIKE K+ LAC
Sbjct: 426 TPDVISYNAIINGLCKAFRVSEAVHLYEEMQARGLCPDEVTFKLIIGGLIKENKLPLACR 485
Query: 546 VWDEMMKNGFTLDSYLSETLIRAINSKE 629
VWD+MM+ GFTL+ LSETLI AINSK+
Sbjct: 486 VWDQMMEKGFTLEPALSETLINAINSKD 513
Score = 102 bits (254), Expect = 1e-19
Identities = 57/194 (29%), Positives = 104/194 (53%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
VD AY + V ++ + + + YN++I+ C++G KA + + M R G PD+VT+ +
Sbjct: 200 VDLAYELTVGALKGRVKFNNLIYNSLISGFCRAGRIDKAQVIKDFMKRDGCEPDLVTYNV 259
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
L+ + A L++ M +IG+ P Y ++ LC+ R + A+ + D +E
Sbjct: 260 LLIYCCDKLMLDEANKLINTMERIGMKPDSYSYNKLLKGLCRAHRPDKAYLLMVDSMESK 319
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
+ +V+SYN +IG +CK +V A LF++M+ G+ PD VT+ ++I+ + +A
Sbjct: 320 GLANVVSYNTIIGAFCKLLRVRRAYQLFEEMRQKGIEPDVVTFTILIKAFLSVGSSDVAK 379
Query: 543 EVWDEMMKNGFTLD 584
+ D+M G D
Sbjct: 380 RLLDQMTGMGLLPD 393
Score = 85.5 bits (210), Expect = 1e-14
Identities = 53/199 (26%), Positives = 101/199 (50%), Gaps = 1/199 (0%)
Frame = +3
Query: 24 LVNKMEVKG-LADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFL 200
L+ M+ G + D+ ++N + LC + A ++F M +G PDVVT+TILID
Sbjct: 101 LLEDMDKLGCIPDIWAFNIYLNVLCGEHRVQLALEVFRRMVERGREPDVVTYTILIDGLC 160
Query: 201 KEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVI 380
K A M K G P + T ++ LC+ G++++A+ + ++ + + +
Sbjct: 161 KAWKFDAAVEAWCGMIKKGFVPDTIACTALVVGLCEGGKVDLAYELTVGALKGRVKFNNL 220
Query: 381 SYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEM 560
YN+LI G+C+ ++++A + M+ G PD VTY +++ + + A ++ + M
Sbjct: 221 IYNSLISGFCRAGRIDKAQVIKDFMKRDGCEPDLVTYNVLLIYCCDKLMLDEANKLINTM 280
Query: 561 MKNGFTLDSYLSETLIRAI 617
+ G DSY L++ +
Sbjct: 281 ERIGMKPDSYSYNKLLKGL 299
Score = 85.1 bits (209), Expect = 2e-14
Identities = 50/182 (27%), Positives = 87/182 (47%)
Frame = +3
Query: 63 VSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQ 242
V YN I L + A + +M +G S T++ I + N ++ + LL+
Sbjct: 45 VDYNRFIGVLARHSRLDLAEHYYHKMAPQGFSLYPFTYSRFISALCAVKNFLLVEKLLED 104
Query: 243 MTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQ 422
M K+G P + + ++ LC R+ +A +F MVE G PDV++Y LI G CK ++
Sbjct: 105 MDKLGCIPDIWAFNIYLNVLCGEHRVQLALEVFRRMVERGREPDVVTYTILIDGLCKAWK 164
Query: 423 VNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSET 602
+ A+ + M G PD + ++ GL + K+ LA E+ +K ++ + +
Sbjct: 165 FDAAVEAWCGMIKKGFVPDTIACTALVVGLCEGGKVDLAYELTVGALKGRVKFNNLIYNS 224
Query: 603 LI 608
LI
Sbjct: 225 LI 226
Score = 80.1 bits (196), Expect = 6e-13
Identities = 51/169 (30%), Positives = 83/169 (49%)
Frame = +3
Query: 66 SYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQM 245
+Y+ I+ALC KL E+M + G PD+ F I ++ E +A + +M
Sbjct: 81 TYSRFISALCAVKNFLLVEKLLEDMDKLGCIPDIWAFNIYLNVLCGEHRVQLALEVFRRM 140
Query: 246 TKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQV 425
+ G P +V YT +ID LCK + + A + M++ G VPD I+ AL+ G C+ +V
Sbjct: 141 VERGREPDVVTYTILIDGLCKAWKFDAAVEAWCGMIKKGFVPDTIACTALVVGLCEGGKV 200
Query: 426 NEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNG 572
+ A L G V + + Y +I G + +I A + D M ++G
Sbjct: 201 DLAYELTVGALKGRVKFNNLIYNSLISGFCRAGRIDKAQVIKDFMKRDG 249
Score = 77.8 bits (190), Expect = 3e-12
Identities = 50/180 (27%), Positives = 78/180 (43%)
Frame = +3
Query: 69 YNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQMT 248
Y + I K+G A +LF+EM V + I + +A+ +M
Sbjct: 12 YRSRIAYCVKTGLIDHAVQLFDEMSHSDCRVFSVDYNRFIGVLARHSRLDLAEHYYHKMA 71
Query: 249 KIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVN 428
G Y+ I LC + + DM + G +PD+ ++N + C ++V
Sbjct: 72 PQGFSLYPFTYSRFISALCAVKNFLLVEKLLEDMDKLGCIPDIWAFNIYLNVLCGEHRVQ 131
Query: 429 EALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSETLI 608
AL +F++M G PD VTY ++I GL K K A E W M+K GF D+ L+
Sbjct: 132 LALEVFRRMVERGREPDVVTYTILIDGLCKAWKFDAAVEAWCGMIKKGFVPDTIACTALV 191
Score = 73.2 bits (178), Expect = 7e-11
Identities = 49/190 (25%), Positives = 93/190 (48%), Gaps = 1/190 (0%)
Frame = +3
Query: 57 DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLL 236
D ++ ++ LC+ G AY+L + + + + + LI F + G A+ +
Sbjct: 183 DTIACTALVVGLCEGGKVDLAYELTVGALKGRVKFNNLIYNSLISGFCRAGRIDKAQVIK 242
Query: 237 DQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKT 416
D M + G P LV Y ++ + C ++ A+ + + M G+ PD SYN L+ G C+
Sbjct: 243 DFMKRDGCEPDLVTYNVLLIYCCDKLMLDEANKLINTMERIGMKPDSYSYNKLLKGLCRA 302
Query: 417 YQVNEA-LHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYL 593
++ ++A L + M++ G+ + V+Y II K ++ A ++++EM + G D
Sbjct: 303 HRPDKAYLLMVDSMESKGLA-NVVSYNTIIGAFCKLLRVRRAYQLFEEMRQKGIEPDVVT 361
Query: 594 SETLIRAINS 623
LI+A S
Sbjct: 362 FTILIKAFLS 371
>ref|XP_007044848.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao] gi|590695292|ref|XP_007044849.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|590695295|ref|XP_007044850.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|590695299|ref|XP_007044851.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|508708783|gb|EOY00680.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|508708784|gb|EOY00681.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|508708785|gb|EOY00682.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|508708786|gb|EOY00683.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao]
Length = 516
Score = 277 bits (709), Expect = 2e-72
Identities = 131/206 (63%), Positives = 167/206 (81%)
Frame = +3
Query: 6 DKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTIL 185
DKA +++VNKME GLAD VS+NTII A CK G KAYKLFEEMGRKGI+PDVVTFT L
Sbjct: 307 DKALLLMVNKMEANGLADAVSHNTIIKAFCKGGHIGKAYKLFEEMGRKGIAPDVVTFTTL 366
Query: 186 IDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGI 365
I + L EG+S +AK+LLD+M+ +GL P + YT IIDHLCK G++ MAH +F DM++ G+
Sbjct: 367 IKACLTEGSSDIAKALLDRMSGMGLLPDCIFYTAIIDHLCKNGKVEMAHSVFDDMIKQGV 426
Query: 366 VPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACE 545
PDV+SYNALI G+CK+ + +EA+HL+++MQT G PDEVT+KLII GLI+EKK+S AC+
Sbjct: 427 NPDVVSYNALINGFCKSNRASEAIHLYEEMQTRGFSPDEVTFKLIIGGLIREKKLSKACK 486
Query: 546 VWDEMMKNGFTLDSYLSETLIRAINS 623
VWD+MM+ GFTLD +SETLI AI+S
Sbjct: 487 VWDQMMEKGFTLDGAVSETLINAIHS 512
Score = 88.2 bits (217), Expect = 2e-15
Identities = 53/199 (26%), Positives = 102/199 (51%), Gaps = 2/199 (1%)
Frame = +3
Query: 21 MLVNKME-VKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSF 197
+L+N M+ + + D+ ++N + LC+ A ++F + +KG PDVVT+TI+ID
Sbjct: 100 LLLNDMDKLNYVPDIWAFNIYLNLLCREKKIELALEVFHSLVKKGRDPDVVTYTIMIDGL 159
Query: 198 LKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVP-D 374
K G A +M G P ++ LC G++++A+ + ++++ G +
Sbjct: 160 CKAGKFDNAVGFWREMVGKGFRPDNKACCALVVGLCDGGKVDLAYELVVEVIKGGDIEFS 219
Query: 375 VISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWD 554
+ YNALI G+C+ ++++A + M G PD VTY +++ E + A ++
Sbjct: 220 TLLYNALISGFCRIRRIDKAQAIKLFMTKNGCEPDLVTYNVLLNYCCNELMLEEAAKLVK 279
Query: 555 EMMKNGFTLDSYLSETLIR 611
+M ++G D Y +I+
Sbjct: 280 KMERSGIGPDVYGYNQMIK 298
Score = 83.2 bits (204), Expect = 7e-14
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 1/203 (0%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLA-DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFT 179
VD AY ++V ++ + + YN +I+ C+ KA + M + G PD+VT+
Sbjct: 200 VDLAYELVVEVIKGGDIEFSTLLYNALISGFCRIRRIDKAQAIKLFMTKNGCEPDLVTYN 259
Query: 180 ILIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEH 359
+L++ E A L+ +M + G+ P + Y +I C R + A + + +E
Sbjct: 260 VLLNYCCNELMLEEAAKLVKKMERSGIGPDVYGYNQMIKGFCNANRPDKALLLMVNKMEA 319
Query: 360 GIVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLA 539
+ D +S+N +I +CK + +A LF++M G+ PD VT+ +I+ + E +A
Sbjct: 320 NGLADAVSHNTIIKAFCKGGHIGKAYKLFEEMGRKGIAPDVVTFTTLIKACLTEGSSDIA 379
Query: 540 CEVWDEMMKNGFTLDSYLSETLI 608
+ D M G D +I
Sbjct: 380 KALLDRMSGMGLLPDCIFYTAII 402
Score = 79.3 bits (194), Expect = 1e-12
Identities = 62/223 (27%), Positives = 94/223 (42%), Gaps = 37/223 (16%)
Frame = +3
Query: 57 DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPD------------------------ 164
DVV+Y +I LCK+G A + EM KG PD
Sbjct: 148 DVVTYTIMIDGLCKAGKFDNAVGFWREMVGKGFRPDNKACCALVVGLCDGGKVDLAYELV 207
Query: 165 ------------VVTFTILIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCK 308
+ + LI F + A+++ MTK G P LV Y ++++ C
Sbjct: 208 VEVIKGGDIEFSTLLYNALISGFCRIRRIDKAQAIKLFMTKNGCEPDLVTYNVLLNYCCN 267
Query: 309 TGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVNEALHLF-KKMQTGGVCPDEV 485
+ A + M GI PDV YN +I G+C + ++AL L KM+ G+ D V
Sbjct: 268 ELMLEEAAKLVKKMERSGIGPDVYGYNQMIKGFCNANRPDKALLLMVNKMEANGLA-DAV 326
Query: 486 TYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSETLIRA 614
++ II+ K I A ++++EM + G D TLI+A
Sbjct: 327 SHNTIIKAFCKGGHIGKAYKLFEEMGRKGIAPDVVTFTTLIKA 369
Score = 75.9 bits (185), Expect = 1e-11
Identities = 46/170 (27%), Positives = 82/170 (48%)
Frame = +3
Query: 63 VSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQ 242
+ YN I L + A + +M +G S T++ I + N + LL+
Sbjct: 45 LDYNRFIGVLLRDSRFDLAEYYYFQMFPQGFSLTPFTYSRFISALCPVKNFNFIELLLND 104
Query: 243 MTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQ 422
M K+ P + + ++ LC+ +I +A +FH +V+ G PDV++Y +I G CK +
Sbjct: 105 MDKLNYVPDIWAFNIYLNLLCREKKIELALEVFHSLVKKGRDPDVVTYTIMIDGLCKAGK 164
Query: 423 VNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNG 572
+ A+ +++M G PD ++ GL K+ LA E+ E++K G
Sbjct: 165 FDNAVGFWREMVGKGFRPDNKACCALVVGLCDGGKVDLAYELVVEVIKGG 214
Score = 73.6 bits (179), Expect = 5e-11
Identities = 47/173 (27%), Positives = 78/173 (45%)
Frame = +3
Query: 69 YNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQMT 248
Y I+ L K+G +A +F++M + + + I L++ +A+ QM
Sbjct: 12 YRAHISRLVKNGLTNQAISMFDQMTQSDCRVFGLDYNRFIGVLLRDSRFDLAEYYYFQMF 71
Query: 249 KIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVN 428
G + Y+ I LC N + +DM + VPD+ ++N + C+ ++
Sbjct: 72 PQGFSLTPFTYSRFISALCPVKNFNFIELLLNDMDKLNYVPDIWAFNIYLNLLCREKKIE 131
Query: 429 EALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDS 587
AL +F + G PD VTY ++I GL K K A W EM+ GF D+
Sbjct: 132 LALEVFHSLVKKGRDPDVVTYTIMIDGLCKAGKFDNAVGFWREMVGKGFRPDN 184
>ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Glycine max]
gi|571471241|ref|XP_006585252.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X2 [Glycine max]
Length = 521
Score = 277 bits (708), Expect = 3e-72
Identities = 126/209 (60%), Positives = 170/209 (81%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
VD+A++M+V +M+ KG+ DVVSYNT+ITA CK+ RK Y+LFEEM KGI PD+VTF I
Sbjct: 310 VDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNI 369
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
LID+FL+EG++ V K LLD+MTK+ + P + YT ++DHLCK G++++AH +F DMVE+G
Sbjct: 370 LIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENG 429
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
+ PDVISYNAL+ G+CKT +V +A+HLF +MQ+ G+ PDEVTYKLI+ GLI+ KKISLAC
Sbjct: 430 VNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLAC 489
Query: 543 EVWDEMMKNGFTLDSYLSETLIRAINSKE 629
VWD+MM+ GFTL+ +LSETL+ AI S +
Sbjct: 490 RVWDQMMERGFTLNRHLSETLVNAIQSSD 518
Score = 103 bits (257), Expect = 5e-20
Identities = 57/188 (30%), Positives = 100/188 (53%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
VD AY ++V ++ + + YN +I C+ G KA K+ M R G PD+VT+ I
Sbjct: 205 VDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNI 264
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
L++ +EG A L++ M + G+ P L Y ++ CK ++ AH + + ++
Sbjct: 265 LLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTK 324
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
+ DV+SYN +I +CK + + LF++M G+ PD VT+ ++I ++E +
Sbjct: 325 GMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVK 384
Query: 543 EVWDEMMK 566
++ DEM K
Sbjct: 385 KLLDEMTK 392
Score = 97.1 bits (240), Expect = 5e-18
Identities = 53/199 (26%), Positives = 103/199 (51%)
Frame = +3
Query: 15 YMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDS 194
+ +L++ + + D+ ++NT + LC+ A +LF M KG PDVV++TI+ID+
Sbjct: 104 HSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDA 163
Query: 195 FLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPD 374
A + ++ GL P ++ LC GR+++A+ + +++ G+ +
Sbjct: 164 LCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVN 223
Query: 375 VISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWD 554
+ YNALI G+C+ +V++A+ + M G PD VTY +++ +E + A + +
Sbjct: 224 SLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVE 283
Query: 555 EMMKNGFTLDSYLSETLIR 611
M ++G D Y L++
Sbjct: 284 TMERSGVEPDLYSYNELLK 302
Score = 94.7 bits (234), Expect = 2e-17
Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 1/198 (0%)
Frame = +3
Query: 24 LVNKMEVKGL-ADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFL 200
L + M KG DVVSY II ALC + +A K++ + KG+SPD L+
Sbjct: 141 LFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLC 200
Query: 201 KEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVI 380
G +A L+ + K G+ + ++Y +ID C+ GR++ A I M G VPD++
Sbjct: 201 SGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLV 260
Query: 381 SYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEM 560
+YN L+ C+ V+EA+ L + M+ GV PD +Y +++G K + A + E
Sbjct: 261 TYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVER 320
Query: 561 MKNGFTLDSYLSETLIRA 614
M+ D T+I A
Sbjct: 321 MQTKGMCDVVSYNTVITA 338
Score = 65.1 bits (157), Expect = 2e-08
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 4/178 (2%)
Frame = +3
Query: 63 VSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQ 242
++Y + I+ L K+G +A LF++M V + I L+ +A +
Sbjct: 11 LAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRR 70
Query: 243 MTKIGLFPSLVL-YTTIIDHLCKT-GRINMA--HGIFHDMVEHGIVPDVISYNALIGGYC 410
F L Y+ I LC IN+ H + DM G VPD+ ++N + C
Sbjct: 71 HVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLC 130
Query: 411 KTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLD 584
+ ++ AL LF M + G PD V+Y +II L K+ A +VW ++ G + D
Sbjct: 131 RQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPD 188
>ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 511
Score = 276 bits (706), Expect = 4e-72
Identities = 135/206 (65%), Positives = 168/206 (81%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
+DKAY ++V+KME KGL DVVSYNTII ALCK+ ++KAY LFEEM +K I PDVVTFTI
Sbjct: 305 LDKAYKLMVDKMETKGLVDVVSYNTIIRALCKTDHSKKAYNLFEEMEQKKIVPDVVTFTI 364
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
LI++ LKEGNS VAK+L+DQMT +GLFP VLYT+IID+LCKTG++ +A IF DMVE G
Sbjct: 365 LIEASLKEGNSSVAKALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQG 424
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
+ PDVISYNALI G+CK +V EAL L++ MQ + PDE+T+KLII GLI+EK +S+AC
Sbjct: 425 VAPDVISYNALISGFCKASRVTEALSLYEDMQARDLNPDEITFKLIIGGLIQEKNLSVAC 484
Query: 543 EVWDEMMKNGFTLDSYLSETLIRAIN 620
+WD+MM+ GFTLD LS+TLI AIN
Sbjct: 485 AIWDQMMEKGFTLDRDLSQTLINAIN 510
Score = 102 bits (254), Expect = 1e-19
Identities = 61/202 (30%), Positives = 103/202 (50%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
VD AY + + + + + YNT+I C++G KA + M R G PD+VT+ +
Sbjct: 200 VDLAYELTLGILRGQVKFNTEIYNTLINGFCRAGRIDKAQAIKTFMRRNGCEPDLVTYNV 259
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
++ E A L+++M GL P Y ++ CK R++ A+ + D +E
Sbjct: 260 FLNYCCNELMLEEAVKLIEKMEGNGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETK 319
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
+ DV+SYN +I CKT +A +LF++M+ + PD VT+ ++I +KE S+A
Sbjct: 320 GLVDVVSYNTIIRALCKTDHSKKAYNLFEEMEQKKIVPDVVTFTILIEASLKEGNSSVAK 379
Query: 543 EVWDEMMKNGFTLDSYLSETLI 608
+ D+M G D L ++I
Sbjct: 380 ALVDQMTSMGLFPDRVLYTSII 401
Score = 95.9 bits (237), Expect = 1e-17
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 1/199 (0%)
Frame = +3
Query: 24 LVNKMEVKGLA-DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFL 200
L+ M KG DVVSY +I+ LC+ G A +++ M RKG+ PD L+
Sbjct: 136 LIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLC 195
Query: 201 KEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVI 380
G +A L + + + + +Y T+I+ C+ GRI+ A I M +G PD++
Sbjct: 196 GSGRVDLAYELTLGILRGQVKFNTEIYNTLINGFCRAGRIDKAQAIKTFMRRNGCEPDLV 255
Query: 381 SYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEM 560
+YN + C + EA+ L +KM+ G+ PD +Y ++RG K ++ A ++ +
Sbjct: 256 TYNVFLNYCCNELMLEEAVKLIEKMEGNGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDK 315
Query: 561 MKNGFTLDSYLSETLIRAI 617
M+ +D T+IRA+
Sbjct: 316 METKGLVDVVSYNTIIRAL 334
Score = 85.5 bits (210), Expect = 1e-14
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 1/197 (0%)
Frame = +3
Query: 24 LVNKMEVKGLA-DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFL 200
L+N M+ G+ + +YN + LC A +L MG KG PDVV++TI+I
Sbjct: 101 LLNDMDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGLC 160
Query: 201 KEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVI 380
+ G A + M + GL P ++ LC +GR+++A+ + ++ + +
Sbjct: 161 RIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGRVDLAYELTLGILRGQVKFNTE 220
Query: 381 SYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEM 560
YN LI G+C+ ++++A + M+ G PD VTY + + E + A ++ ++M
Sbjct: 221 IYNTLINGFCRAGRIDKAQAIKTFMRRNGCEPDLVTYNVFLNYCCNELMLEEAVKLIEKM 280
Query: 561 MKNGFTLDSYLSETLIR 611
NG D Y L+R
Sbjct: 281 EGNGLEPDGYSYNQLLR 297
Score = 78.6 bits (192), Expect = 2e-12
Identities = 48/182 (26%), Positives = 88/182 (48%)
Frame = +3
Query: 63 VSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQ 242
+ YN II L ++ A + EM G S + +T++ I K N + LL+
Sbjct: 45 IDYNRIIGVLIRTSHFDLAEGYYNEMKPVGFSLNSLTYSKFICGLCKVKNFDLISRLLND 104
Query: 243 MTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQ 422
M ++G+ P+ Y ++ LC +++A + M E G PDV+SY +I G C+ +
Sbjct: 105 MDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGLCRIGR 164
Query: 423 VNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSET 602
+ A+ ++ M G+ PD K ++ GL ++ LA E+ +++ ++ + T
Sbjct: 165 FDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGRVDLAYELTLGILRGQVKFNTEIYNT 224
Query: 603 LI 608
LI
Sbjct: 225 LI 226
Score = 77.0 bits (188), Expect = 5e-12
Identities = 46/180 (25%), Positives = 88/180 (48%)
Frame = +3
Query: 69 YNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQMT 248
Y T I+ K+G +A ++F++M + + + +I ++ + +A+ ++M
Sbjct: 12 YRTRISNYVKTGLVNEALQVFDKMTQSDCRVFSIDYNRIIGVLIRTSHFDLAEGYYNEMK 71
Query: 249 KIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVN 428
+G + + Y+ I LCK ++ + +DM GIVP+ +YN + C V+
Sbjct: 72 PVGFSLNSLTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSENLVD 131
Query: 429 EALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSETLI 608
AL L + M G PD V+Y ++I GL + + A E+W M++ G D+ + L+
Sbjct: 132 IALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALV 191
>ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Solanum lycopersicum]
Length = 511
Score = 275 bits (704), Expect = 7e-72
Identities = 135/206 (65%), Positives = 169/206 (82%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
+DKAY ++V+KME KGL DVVSYNTII ALCK+ ++KAY LF+EM +K I PDVVTFTI
Sbjct: 305 LDKAYKLMVDKMETKGLVDVVSYNTIIRALCKTDQSKKAYILFKEMEQKKILPDVVTFTI 364
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
LI++ LKEGNS VAK+L+DQMT +GLFP VLYT+IID+LCKTG++ +A IF DMVE G
Sbjct: 365 LIEASLKEGNSSVAKALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQG 424
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
+ PDVISYNALI G+CK +V EAL L++ MQT G+ PDE+T+KLII GLI+ K +S+AC
Sbjct: 425 VAPDVISYNALISGFCKASRVTEALSLYEDMQTRGLNPDEITFKLIIGGLIQGKNLSVAC 484
Query: 543 EVWDEMMKNGFTLDSYLSETLIRAIN 620
+WD+MM+ GFTLD LS+TLI AIN
Sbjct: 485 AIWDQMMEKGFTLDRDLSQTLINAIN 510
Score = 107 bits (267), Expect = 3e-21
Identities = 64/202 (31%), Positives = 104/202 (51%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
VD AY + + + + + YNT+I C++G KA + M R G PD+VT+ +
Sbjct: 200 VDLAYELTLGILRGQVKFNTEIYNTLINGFCRAGRIDKAQAIKTFMKRNGCEPDLVTYNV 259
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
++ E A L+++M IGL P Y ++ CK R++ A+ + D +E
Sbjct: 260 FLNYCCNELMLEEAMKLIEKMEGIGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETK 319
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
+ DV+SYN +I CKT Q +A LFK+M+ + PD VT+ ++I +KE S+A
Sbjct: 320 GLVDVVSYNTIIRALCKTDQSKKAYILFKEMEQKKILPDVVTFTILIEASLKEGNSSVAK 379
Query: 543 EVWDEMMKNGFTLDSYLSETLI 608
+ D+M G D L ++I
Sbjct: 380 ALVDQMTSMGLFPDRVLYTSII 401
Score = 95.1 bits (235), Expect = 2e-17
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 1/199 (0%)
Frame = +3
Query: 24 LVNKMEVKGLA-DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFL 200
L+ M KG DVVSY +I+ LC+ G A +++ M RKG+ PD L+
Sbjct: 136 LIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLC 195
Query: 201 KEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVI 380
G +A L + + + + +Y T+I+ C+ GRI+ A I M +G PD++
Sbjct: 196 GSGKVDLAYELTLGILRGQVKFNTEIYNTLINGFCRAGRIDKAQAIKTFMKRNGCEPDLV 255
Query: 381 SYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEM 560
+YN + C + EA+ L +KM+ G+ PD +Y ++RG K ++ A ++ +
Sbjct: 256 TYNVFLNYCCNELMLEEAMKLIEKMEGIGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDK 315
Query: 561 MKNGFTLDSYLSETLIRAI 617
M+ +D T+IRA+
Sbjct: 316 METKGLVDVVSYNTIIRAL 334
Score = 80.9 bits (198), Expect = 3e-13
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 1/197 (0%)
Frame = +3
Query: 24 LVNKMEVKGLA-DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFL 200
L+N M+ G+ + +YN + LC A +L MG KG PDVV++TI+I
Sbjct: 101 LLNDMDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGLC 160
Query: 201 KEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVI 380
+ G A + M + GL P ++ LC +G++++A+ + ++ + +
Sbjct: 161 RIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGKVDLAYELTLGILRGQVKFNTE 220
Query: 381 SYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEM 560
YN LI G+C+ ++++A + M+ G PD VTY + + E + A ++ ++M
Sbjct: 221 IYNTLINGFCRAGRIDKAQAIKTFMKRNGCEPDLVTYNVFLNYCCNELMLEEAMKLIEKM 280
Query: 561 MKNGFTLDSYLSETLIR 611
G D Y L+R
Sbjct: 281 EGIGLEPDGYSYNQLLR 297
Score = 79.7 bits (195), Expect = 8e-13
Identities = 47/180 (26%), Positives = 89/180 (49%)
Frame = +3
Query: 69 YNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQMT 248
Y T I++ K+G +A ++F+EM + + + +I ++ + +A+ ++M
Sbjct: 12 YRTRISSYVKTGLVNEALQVFDEMTQSDCRVFSIDYNRIIGVLIRTSHFDLAEGYYNEMK 71
Query: 249 KIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVN 428
+G + + Y+ I LCK ++ + +DM GIVP+ +YN + C V+
Sbjct: 72 PVGFSLNSLTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSENLVD 131
Query: 429 EALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSETLI 608
AL L + M G PD V+Y ++I GL + + A E+W M++ G D+ + L+
Sbjct: 132 IALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALV 191
Score = 79.7 bits (195), Expect = 8e-13
Identities = 49/182 (26%), Positives = 88/182 (48%)
Frame = +3
Query: 63 VSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQ 242
+ YN II L ++ A + EM G S + +T++ I K N + LL+
Sbjct: 45 IDYNRIIGVLIRTSHFDLAEGYYNEMKPVGFSLNSLTYSKFICGLCKVKNFDLISRLLND 104
Query: 243 MTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQ 422
M ++G+ P+ Y ++ LC +++A + M E G PDV+SY +I G C+ +
Sbjct: 105 MDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGLCRIGR 164
Query: 423 VNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSET 602
+ A+ ++ M G+ PD K ++ GL K+ LA E+ +++ ++ + T
Sbjct: 165 FDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGKVDLAYELTLGILRGQVKFNTEIYNT 224
Query: 603 LI 608
LI
Sbjct: 225 LI 226
Score = 75.1 bits (183), Expect = 2e-11
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 1/182 (0%)
Frame = +3
Query: 30 NKMEVKGLA-DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKE 206
N+M+ G + + ++Y+ I LCK +L +M R GI P+ + + ++ E
Sbjct: 68 NEMKPVGFSLNSLTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSE 127
Query: 207 GNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISY 386
+A L+ M + G P +V YT +I LC+ GR + A ++H M+ G+ PD +
Sbjct: 128 NLVDIALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKAC 187
Query: 387 NALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMK 566
AL+ G C + +V+ A L + G V + Y +I G + +I A + M +
Sbjct: 188 KALVFGLCGSGKVDLAYELTLGILRGQVKFNTEIYNTLINGFCRAGRIDKAQAIKTFMKR 247
Query: 567 NG 572
NG
Sbjct: 248 NG 249
>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 554
Score = 273 bits (698), Expect = 4e-71
Identities = 133/202 (65%), Positives = 161/202 (79%)
Frame = +3
Query: 6 DKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTIL 185
DKAY+++ NKM KGL DVVSYNTII A CK G AYKLFEEMG+KGI PDVVTFTI
Sbjct: 307 DKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIF 366
Query: 186 IDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGI 365
I +FL +G+ +AK LLDQMT++GL P + YTTIIDHLCK+G++ MAH IF DMVE GI
Sbjct: 367 IKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGI 426
Query: 366 VPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACE 545
PDVIS+NALI G+CK +V+EA+HL+++MQ G PDEVTYKLII GLI+EKKIS+AC
Sbjct: 427 SPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACM 486
Query: 546 VWDEMMKNGFTLDSYLSETLIR 611
VW +MM GFTLD +++TLIR
Sbjct: 487 VWGQMMDKGFTLDRAIAQTLIR 508
Score = 81.3 bits (199), Expect = 3e-13
Identities = 51/190 (26%), Positives = 85/190 (44%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
+DKA + + + YN I L A + +MG +G S T++
Sbjct: 25 IDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFTYSR 84
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
I K N LL M + P + + + L GRI++A +F +V++G
Sbjct: 85 FITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNG 144
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
PDV++Y +I G CK + + A+ ++ M G PD I+ GL +K+ LA
Sbjct: 145 RKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAY 204
Query: 543 EVWDEMMKNG 572
E+ ++MK+G
Sbjct: 205 ELIIDVMKSG 214
Score = 78.2 bits (191), Expect = 2e-12
Identities = 48/173 (27%), Positives = 78/173 (45%)
Frame = +3
Query: 69 YNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQMT 248
Y + I K+G KA ++F+EM + + + I + +A QM
Sbjct: 12 YRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMG 71
Query: 249 KIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVN 428
G S Y+ I LCK + HDM +PD+ ++N + +++
Sbjct: 72 TRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRID 131
Query: 429 EALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDS 587
AL +F+K+ G PD VTY +II G+ K KK A + W +M+ GF+ D+
Sbjct: 132 LALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDN 184
Score = 78.2 bits (191), Expect = 2e-12
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Frame = +3
Query: 57 DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLL 236
DVV+Y II +CK A + + +M KG SPD ++ +A L+
Sbjct: 148 DVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELI 207
Query: 237 DQMTKIGLFP-SLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCK 413
+ K G S ++Y +I C+ GRI+ A I M +G PD+++YN + +C
Sbjct: 208 IDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCD 267
Query: 414 TYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIK 518
+++A L K M+ G+ PD +Y +++G+ K
Sbjct: 268 ELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICK 302
Score = 77.0 bits (188), Expect = 5e-12
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 2/200 (1%)
Frame = +3
Query: 24 LVNKMEVKG-LADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFL 200
L++ ME L D+ ++N + L G A ++FE++ + G PDVVT+TI+I
Sbjct: 101 LLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVC 160
Query: 201 KEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVP-DV 377
K A M G P I+ LC ++++A+ + D+++ G V
Sbjct: 161 KIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLST 220
Query: 378 ISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDE 557
+ YNALI G+C+ ++++A + M+ G PD VTY + + E + A ++
Sbjct: 221 LVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKL 280
Query: 558 MMKNGFTLDSYLSETLIRAI 617
M ++G D Y L++ I
Sbjct: 281 MERSGIEPDVYSYNQLLKGI 300
>ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 516
Score = 270 bits (690), Expect = 3e-70
Identities = 131/209 (62%), Positives = 167/209 (79%)
Frame = +3
Query: 6 DKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTIL 185
+KAY+ + N ME KGL +VVS+NTII A CK G R+AYKLF+EM +KGI PDVVTFTIL
Sbjct: 307 EKAYLFMKNMMEPKGLCNVVSFNTIIMACCKGGQTRRAYKLFQEMFQKGILPDVVTFTIL 366
Query: 186 IDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGI 365
I +FL+EG+S VAK LLDQMT + L P + YTTIIDHLCK+G+I MA +F+DM+E GI
Sbjct: 367 IGAFLREGSSDVAKKLLDQMTGMDLLPDRIFYTTIIDHLCKSGKIAMACDMFNDMLEKGI 426
Query: 366 VPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACE 545
DV+ YNALI G C+ +V EA+HL+++MQT G PDEVTYK++I GLIK+K++S+AC
Sbjct: 427 TADVVLYNALISGLCRASRVTEAMHLYEEMQTRGCFPDEVTYKVVIGGLIKDKRLSVACG 486
Query: 546 VWDEMMKNGFTLDSYLSETLIRAINSKEI 632
VWDEMM+ GFTLD LSETLI A++SK++
Sbjct: 487 VWDEMMEKGFTLDRVLSETLINAVHSKDL 515
Score = 91.3 bits (225), Expect = 3e-16
Identities = 50/178 (28%), Positives = 94/178 (52%)
Frame = +3
Query: 57 DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLL 236
D+ ++N + LC+ A ++F+ M KG PDVV++TI+I K G A +
Sbjct: 114 DIWAFNIYLNLLCQENRIHYALEVFDRMADKGREPDVVSYTIVIHGLCKAGRFDNAVEIW 173
Query: 237 DQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKT 416
+ M G P + T ++ LC G++++A+ + ++ G+ + + YNALI G+C+
Sbjct: 174 NGMISKGFRPDTIACTALVVGLCGGGKVDLAYDLVIGEMKGGVEFNNLIYNALISGFCRA 233
Query: 417 YQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSY 590
++++A + M+ G PD VT+ +++ E + A ++ +M K G LD+Y
Sbjct: 234 RRIDKAQAIKLFMKRNGCKPDLVTHNVLLNYCCNEFMLEEAEKLMRQMEKIGMKLDAY 291
Score = 85.9 bits (211), Expect = 1e-14
Identities = 55/181 (30%), Positives = 84/181 (46%)
Frame = +3
Query: 66 SYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQM 245
+Y+ I+ LC KL +M R G PD+ F I ++ +E A + D+M
Sbjct: 82 TYSRFISGLCNVNNFTLIEKLLRDMDRLGSVPDIWAFNIYLNLLCQENRIHYALEVFDRM 141
Query: 246 TKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQV 425
G P +V YT +I LCK GR + A I++ M+ G PD I+ AL+ G C +V
Sbjct: 142 ADKGREPDVVSYTIVIHGLCKAGRFDNAVEIWNGMISKGFRPDTIACTALVVGLCGGGKV 201
Query: 426 NEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSETL 605
+ A L GGV + + Y +I G + ++I A + M +NG D L
Sbjct: 202 DLAYDLVIGEMKGGVEFNNLIYNALISGFCRARRIDKAQAIKLFMKRNGCKPDLVTHNVL 261
Query: 606 I 608
+
Sbjct: 262 L 262
Score = 82.8 bits (203), Expect = 9e-14
Identities = 51/182 (28%), Positives = 84/182 (46%)
Frame = +3
Query: 63 VSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQ 242
V YN I L K A + EM +G S T++ I N + + LL
Sbjct: 46 VDYNRFIGVLVKHSRYDLAEHYYYEMAPQGFSLTPFTYSRFISGLCNVNNFTLIEKLLRD 105
Query: 243 MTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQ 422
M ++G P + + ++ LC+ RI+ A +F M + G PDV+SY +I G CK +
Sbjct: 106 MDRLGSVPDIWAFNIYLNLLCQENRIHYALEVFDRMADKGREPDVVSYTIVIHGLCKAGR 165
Query: 423 VNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSET 602
+ A+ ++ M + G PD + ++ GL K+ LA ++ MK G ++ +
Sbjct: 166 FDNAVEIWNGMISKGFRPDTIACTALVVGLCGGGKVDLAYDLVIGEMKGGVEFNNLIYNA 225
Query: 603 LI 608
LI
Sbjct: 226 LI 227
Score = 82.8 bits (203), Expect = 9e-14
Identities = 50/170 (29%), Positives = 84/170 (49%)
Frame = +3
Query: 57 DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLL 236
DVVSY +I LCK+G A +++ M KG PD + T L+ G +A L+
Sbjct: 149 DVVSYTIVIHGLCKAGRFDNAVEIWNGMISKGFRPDTIACTALVVGLCGGGKVDLAYDLV 208
Query: 237 DQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKT 416
K G+ + ++Y +I C+ RI+ A I M +G PD++++N L+ C
Sbjct: 209 IGEMKGGVEFNNLIYNALISGFCRARRIDKAQAIKLFMKRNGCKPDLVTHNVLLNYCCNE 268
Query: 417 YQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMK 566
+ + EA L ++M+ G+ D +Y ++GL K+ + A MM+
Sbjct: 269 FMLEEAEKLMRQMEKIGMKLDAYSYNGFLKGLCKDNRPEKAYLFMKNMME 318
Score = 78.2 bits (191), Expect = 2e-12
Identities = 47/180 (26%), Positives = 81/180 (45%)
Frame = +3
Query: 69 YNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQMT 248
Y + +T K+G A +F+EM + V + I +K +A+ +M
Sbjct: 13 YRSRMTHYVKTGLIDHALHVFDEMTQSNCRVFSVDYNRFIGVLVKHSRYDLAEHYYYEMA 72
Query: 249 KIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVN 428
G + Y+ I LC + + DM G VPD+ ++N + C+ +++
Sbjct: 73 PQGFSLTPFTYSRFISGLCNVNNFTLIEKLLRDMDRLGSVPDIWAFNIYLNLLCQENRIH 132
Query: 429 EALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSETLI 608
AL +F +M G PD V+Y ++I GL K + A E+W+ M+ GF D+ L+
Sbjct: 133 YALEVFDRMADKGREPDVVSYTIVIHGLCKAGRFDNAVEIWNGMISKGFRPDTIACTALV 192
>ref|XP_002312667.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222852487|gb|EEE90034.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 512
Score = 269 bits (687), Expect = 7e-70
Identities = 131/206 (63%), Positives = 157/206 (76%)
Frame = +3
Query: 6 DKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTIL 185
DKAY+ +V KM KG DVVSYNTII A C NR+AYKLFEEMGRKGI+PDVVTFTIL
Sbjct: 307 DKAYLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTIL 366
Query: 186 IDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGI 365
I +FL+EGNS +AK LLD M +GL P + YTTIIDH CK+G++ MAH IF DMVE GI
Sbjct: 367 IKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGI 426
Query: 366 VPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACE 545
PDV+SYNALI G+CK+ +V E +HL+++M G PDEVTYKLII L++E K+S AC
Sbjct: 427 TPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACR 486
Query: 546 VWDEMMKNGFTLDSYLSETLIRAINS 623
VWD+MM+ G TLD +SE LI AI S
Sbjct: 487 VWDQMMERGLTLDRGISEMLINAIQS 512
Score = 79.7 bits (195), Expect = 8e-13
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 1/187 (0%)
Frame = +3
Query: 57 DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLL 236
D+ ++N + L + A ++F M +G PDVVTFTI+ID K A
Sbjct: 113 DIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFW 172
Query: 237 DQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVP-DVISYNALIGGYCK 413
M G+ P + LC G++++A+ + ++ G+ + YNALI G+C+
Sbjct: 173 LNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCR 232
Query: 414 TYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYL 593
++++AL + M G PD VTY +++ E A ++ +M + D Y
Sbjct: 233 AGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYS 292
Query: 594 SETLIRA 614
L++A
Sbjct: 293 YNQLLKA 299
Score = 73.6 bits (179), Expect = 5e-11
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 1/155 (0%)
Frame = +3
Query: 57 DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLL 236
DVV++ II LCK A + + M KGI PD L G +A L+
Sbjct: 148 DVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELI 207
Query: 237 DQMTKIGLFP-SLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCK 413
+ GL S ++Y +I C+ GRI+ A + M G PD+++YN L+ C
Sbjct: 208 IGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCN 267
Query: 414 TYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIK 518
+ EA+ L KKM+ + PD +Y +++ K
Sbjct: 268 EFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCK 302
Score = 71.2 bits (173), Expect = 3e-10
Identities = 47/173 (27%), Positives = 75/173 (43%)
Frame = +3
Query: 69 YNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQMT 248
Y T I + K+G A K+F+EM + + I ++ +A +M
Sbjct: 12 YRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMA 71
Query: 249 KIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVN 428
+G S Y+ I LC+T + DM + VPD+ ++N + + +
Sbjct: 72 PLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREE 131
Query: 429 EALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDS 587
AL +F +M G PD VT+ +II GL K KK A + W M+ G D+
Sbjct: 132 SALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDN 184
Score = 70.1 bits (170), Expect = 6e-10
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Frame = +3
Query: 6 DKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISP-DVVTFTI 182
D A +N ++ D + + LC G AY+L + G+S + +
Sbjct: 166 DAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNA 225
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
LI F + G A +++ M++ G P LV Y ++++ C A + M
Sbjct: 226 LISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSA 285
Query: 363 IVPDVISYNALIGGYCKTYQVNEA-LHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLA 539
I PDV SYN L+ +CK ++A L + KM G C D V+Y II+ A
Sbjct: 286 IEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFC-DVVSYNTIIKAFCSISNNRRA 344
Query: 540 CEVWDEMMKNGFTLDSYLSETLIRA 614
++++EM + G D LI+A
Sbjct: 345 YKLFEEMGRKGIAPDVVTFTILIKA 369
Score = 62.0 bits (149), Expect = 2e-07
Identities = 41/172 (23%), Positives = 73/172 (42%)
Frame = +3
Query: 63 VSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQ 242
+ YN I L + A+ + +M G S T++ I + +LL
Sbjct: 45 IDYNRFIGVLIRHSRFDLAHHYYSKMAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKD 104
Query: 243 MTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQ 422
M K+ P + + ++ L + R A +F MVE G PDV+++ +I G CK +
Sbjct: 105 MEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKK 164
Query: 423 VNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFT 578
+ A+ + M G+ PD + GL ++ LA E+ ++ G +
Sbjct: 165 FDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLS 216
>ref|XP_007159689.1| hypothetical protein PHAVU_002G258900g [Phaseolus vulgaris]
gi|561033104|gb|ESW31683.1| hypothetical protein
PHAVU_002G258900g [Phaseolus vulgaris]
Length = 518
Score = 268 bits (686), Expect = 9e-70
Identities = 122/209 (58%), Positives = 165/209 (78%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
VD+AY+MLV +M+ KG+ DVVSYNT+ITA CK R+ Y+LFEEM KGI PD+VTF I
Sbjct: 308 VDRAYLMLVERMQTKGMCDVVSYNTLITAFCKVRRTRRGYELFEEMCGKGIRPDMVTFNI 367
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
LID+FL+EG+ V K LLD+MT++G+ P + YT ++DHLCKTG+++ A +F DMVE+G
Sbjct: 368 LIDAFLREGSIQVVKKLLDEMTRLGILPDRIFYTAVVDHLCKTGKVDTADSVFRDMVENG 427
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
+ PDVISYNAL+ G+CK +V +A+ L+ +MQ G+ PDEVT+KLI+ GLI+ KK+SLAC
Sbjct: 428 VNPDVISYNALVNGFCKASRVMDAMRLYDEMQRNGLYPDEVTFKLIVGGLIRGKKLSLAC 487
Query: 543 EVWDEMMKNGFTLDSYLSETLIRAINSKE 629
VWD+MM+ G TLD +LSETL+ AI S++
Sbjct: 488 RVWDQMMEKGLTLDKHLSETLVNAIQSRD 516
Score = 102 bits (255), Expect = 8e-20
Identities = 57/194 (29%), Positives = 100/194 (51%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
VD AY ++V ++ +++ YN +I C+ G KA K+ M R G PD+VT+
Sbjct: 203 VDLAYELVVGVIKGGVKVNILVYNALIDGFCRMGRVDKAMKIKAFMSRNGCVPDLVTYNT 262
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
L++ EG A L++ M + G+ P Y ++ CK ++ A+ + + ++
Sbjct: 263 LLNYCCDEGMLDEALRLVETMERSGVEPDFYSYNELLKCFCKANMVDRAYLMLVERMQTK 322
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
+ DV+SYN LI +CK + LF++M G+ PD VT+ ++I ++E I +
Sbjct: 323 GMCDVVSYNTLITAFCKVRRTRRGYELFEEMCGKGIRPDMVTFNILIDAFLREGSIQVVK 382
Query: 543 EVWDEMMKNGFTLD 584
++ DEM + G D
Sbjct: 383 KLLDEMTRLGILPD 396
Score = 96.7 bits (239), Expect = 6e-18
Identities = 52/185 (28%), Positives = 97/185 (52%)
Frame = +3
Query: 57 DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLL 236
D+ ++NT ++ LC+ A +LF M +G PDVV++TI++D+ K A +
Sbjct: 116 DIWAFNTYLSFLCRHNRLETALELFHSMPSEGREPDVVSYTIIVDALCKAQRYDEAARVW 175
Query: 237 DQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKT 416
+T GL P ++ LC GR+++A+ + +++ G+ +++ YNALI G+C+
Sbjct: 176 RGLTGKGLSPDFKACVALVVGLCGGGRVDLAYELVVGVIKGGVKVNILVYNALIDGFCRM 235
Query: 417 YQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLS 596
+V++A+ + M G PD VTY ++ E + A + + M ++G D Y
Sbjct: 236 GRVDKAMKIKAFMSRNGCVPDLVTYNTLLNYCCDEGMLDEALRLVETMERSGVEPDFYSY 295
Query: 597 ETLIR 611
L++
Sbjct: 296 NELLK 300
Score = 94.0 bits (232), Expect = 4e-17
Identities = 58/186 (31%), Positives = 95/186 (51%)
Frame = +3
Query: 57 DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLL 236
DVVSY I+ ALCK+ +A +++ + KG+SPD L+ G +A L+
Sbjct: 151 DVVSYTIIVDALCKAQRYDEAARVWRGLTGKGLSPDFKACVALVVGLCGGGRVDLAYELV 210
Query: 237 DQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKT 416
+ K G+ ++++Y +ID C+ GR++ A I M +G VPD+++YN L+ C
Sbjct: 211 VGVIKGGVKVNILVYNALIDGFCRMGRVDKAMKIKAFMSRNGCVPDLVTYNTLLNYCCDE 270
Query: 417 YQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLS 596
++EAL L + M+ GV PD +Y +++ K + A + E M+ D
Sbjct: 271 GMLDEALRLVETMERSGVEPDFYSYNELLKCFCKANMVDRAYLMLVERMQTKGMCDVVSY 330
Query: 597 ETLIRA 614
TLI A
Sbjct: 331 NTLITA 336
>ref|XP_007227261.1| hypothetical protein PRUPE_ppa017811mg [Prunus persica]
gi|462424197|gb|EMJ28460.1| hypothetical protein
PRUPE_ppa017811mg [Prunus persica]
Length = 541
Score = 268 bits (686), Expect = 9e-70
Identities = 124/204 (60%), Positives = 164/204 (80%)
Frame = +3
Query: 6 DKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTIL 185
DKAY+++ +ME KGL +VVSYNTIITA C++ +AYKLFEEMG+KG PDVVTFTIL
Sbjct: 306 DKAYLLMRTRMEPKGLCNVVSYNTIITAFCRAHRTGRAYKLFEEMGQKGTMPDVVTFTIL 365
Query: 186 IDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGI 365
I++FL+EG+S +A LLDQMT +GL P + YTTI+DHLCK+G+I MA+ +F DM+E GI
Sbjct: 366 IEAFLREGSSDIANKLLDQMTVMGLLPDRIFYTTIVDHLCKSGKIAMAYSVFSDMLEKGI 425
Query: 366 VPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACE 545
PD +S+NALI G CK +V+EA+HL+++MQ G CPDEVT+KLII GLI+E K+S+AC
Sbjct: 426 APDAVSFNALINGLCKASRVSEAMHLYEEMQNRGCCPDEVTFKLIIGGLIRENKLSVACR 485
Query: 546 VWDEMMKNGFTLDSYLSETLIRAI 617
VWD+MM+ GFTLD +SE L++ +
Sbjct: 486 VWDQMMEKGFTLDGAVSERLMKLL 509
Score = 101 bits (251), Expect = 2e-19
Identities = 55/202 (27%), Positives = 103/202 (50%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
VD AY +++ +M+ + + YNT+I C++G KA + M R G D+VT +
Sbjct: 200 VDLAYNLVIGEMKGQVKFSNLMYNTLINGFCRAGRIDKAQAIKSFMKRNGCESDLVTHNV 259
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
L+ E A+ L+ +M + G+ P + Y ++ LC+ R + A+ + +E
Sbjct: 260 LLKYCCNEFMLEEAEKLMKKMERSGMEPDVYSYNQLLKGLCQANRADKAYLLMRTRMEPK 319
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
+ +V+SYN +I +C+ ++ A LF++M G PD VT+ ++I ++E +A
Sbjct: 320 GLCNVVSYNTIITAFCRAHRTGRAYKLFEEMGQKGTMPDVVTFTILIEAFLREGSSDIAN 379
Query: 543 EVWDEMMKNGFTLDSYLSETLI 608
++ D+M G D T++
Sbjct: 380 KLLDQMTVMGLLPDRIFYTTIV 401
Score = 89.7 bits (221), Expect = 7e-16
Identities = 52/161 (32%), Positives = 84/161 (52%)
Frame = +3
Query: 57 DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLL 236
DVVSY +I LCK+ KA ++ M RKG PD + T L+ G +A +L+
Sbjct: 148 DVVSYTILIDGLCKARQFDKAVDIWTSMIRKGFKPDNIACTALVVGLCDGGKVDLAYNLV 207
Query: 237 DQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKT 416
K + S ++Y T+I+ C+ GRI+ A I M +G D++++N L+ C
Sbjct: 208 IGEMKGQVKFSNLMYNTLINGFCRAGRIDKAQAIKSFMKRNGCESDLVTHNVLLKYCCNE 267
Query: 417 YQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLA 539
+ + EA L KKM+ G+ PD +Y +++GL + + A
Sbjct: 268 FMLEEAEKLMKKMERSGMEPDVYSYNQLLKGLCQANRADKA 308
Score = 86.7 bits (213), Expect = 6e-15
Identities = 52/182 (28%), Positives = 84/182 (46%)
Frame = +3
Query: 63 VSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQ 242
+ YN I L + A + EM +G S T++ I K N + + L+
Sbjct: 45 IDYNRFIGVLVRHSRYDLAEHYYYEMVPQGFSLSAFTYSRFISGLCKIRNFTLIEKLIRD 104
Query: 243 MTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQ 422
M ++G P + + ++ LC+ R + A +FH MV+ G PDV+SY LI G CK Q
Sbjct: 105 MDRLGAVPDIWAFNIYLNLLCQENRAHFALEVFHRMVDKGREPDVVSYTILIDGLCKARQ 164
Query: 423 VNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSET 602
++A+ ++ M G PD + ++ GL K+ LA + MK + + T
Sbjct: 165 FDKAVDIWTSMIRKGFKPDNIACTALVVGLCDGGKVDLAYNLVIGEMKGQVKFSNLMYNT 224
Query: 603 LI 608
LI
Sbjct: 225 LI 226
Score = 83.6 bits (205), Expect = 5e-14
Identities = 50/199 (25%), Positives = 99/199 (49%), Gaps = 1/199 (0%)
Frame = +3
Query: 24 LVNKMEVKG-LADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFL 200
L+ M+ G + D+ ++N + LC+ A ++F M KG PDVV++TILID
Sbjct: 101 LIRDMDRLGAVPDIWAFNIYLNLLCQENRAHFALEVFHRMVDKGREPDVVSYTILIDGLC 160
Query: 201 KEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVI 380
K A + M + G P + T ++ LC G++++A+ + ++ + +
Sbjct: 161 KARQFDKAVDIWTSMIRKGFKPDNIACTALVVGLCDGGKVDLAYNLVIGEMKGQVKFSNL 220
Query: 381 SYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEM 560
YN LI G+C+ ++++A + M+ G D VT+ ++++ E + A ++ +M
Sbjct: 221 MYNTLINGFCRAGRIDKAQAIKSFMKRNGCESDLVTHNVLLKYCCNEFMLEEAEKLMKKM 280
Query: 561 MKNGFTLDSYLSETLIRAI 617
++G D Y L++ +
Sbjct: 281 ERSGMEPDVYSYNQLLKGL 299
Score = 82.4 bits (202), Expect = 1e-13
Identities = 53/182 (29%), Positives = 83/182 (45%)
Frame = +3
Query: 66 SYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQM 245
+Y+ I+ LCK KL +M R G PD+ F I ++ +E + A + +M
Sbjct: 81 TYSRFISGLCKIRNFTLIEKLIRDMDRLGAVPDIWAFNIYLNLLCQENRAHFALEVFHRM 140
Query: 246 TKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQV 425
G P +V YT +ID LCK + + A I+ M+ G PD I+ AL+ G C +V
Sbjct: 141 VDKGREPDVVSYTILIDGLCKARQFDKAVDIWTSMIRKGFKPDNIACTALVVGLCDGGKV 200
Query: 426 NEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSETL 605
+ A +L G V + Y +I G + +I A + M +NG D L
Sbjct: 201 DLAYNLVIGEMKGQVKFSNLMYNTLINGFCRAGRIDKAQAIKSFMKRNGCESDLVTHNVL 260
Query: 606 IR 611
++
Sbjct: 261 LK 262
Score = 78.2 bits (191), Expect = 2e-12
Identities = 46/180 (25%), Positives = 83/180 (46%)
Frame = +3
Query: 69 YNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQMT 248
+ + I K+G +A ++F+EM R + + I ++ +A+ +M
Sbjct: 12 FRSRIVYYVKTGLIDQALQVFDEMTRSDCRVFSIDYNRFIGVLVRHSRYDLAEHYYYEMV 71
Query: 249 KIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVN 428
G S Y+ I LCK + + DM G VPD+ ++N + C+ + +
Sbjct: 72 PQGFSLSAFTYSRFISGLCKIRNFTLIEKLIRDMDRLGAVPDIWAFNIYLNLLCQENRAH 131
Query: 429 EALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSETLI 608
AL +F +M G PD V+Y ++I GL K ++ A ++W M++ GF D+ L+
Sbjct: 132 FALEVFHRMVDKGREPDVVSYTILIDGLCKARQFDKAVDIWTSMIRKGFKPDNIACTALV 191
>ref|XP_004504137.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cicer arietinum]
Length = 516
Score = 265 bits (677), Expect = 1e-68
Identities = 123/209 (58%), Positives = 165/209 (78%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
VD+AY+ +V +M+ KG+ DVVSYNTII A CK+ + Y+LFEEM RKGI PDV+TFT+
Sbjct: 306 VDRAYLTMVKRMQTKGMCDVVSYNTIIAAFCKARRIERGYELFEEMRRKGIQPDVITFTV 365
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
LI++F KEG S VAK LLDQMT +G+ P L+ YTTI+D LCK ++++AHG+F DMVE+G
Sbjct: 366 LIEAFFKEGGSDVAKKLLDQMTTMGIVPDLIFYTTIVDRLCKAWKVDIAHGVFCDMVENG 425
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
+ PDV+SYNALI G+CK +V +A+ L+ +MQ G+ PD VT+KLI+ GLI+E KIS AC
Sbjct: 426 VSPDVVSYNALINGFCKASRVMDAMCLYDEMQDKGLYPDGVTFKLIVGGLIRENKISEAC 485
Query: 543 EVWDEMMKNGFTLDSYLSETLIRAINSKE 629
+VWD+MM+ GFTLD LSETL+ A+ S++
Sbjct: 486 KVWDQMMEKGFTLDRRLSETLVNAMKSRD 514
Score = 99.4 bits (246), Expect = 9e-19
Identities = 55/202 (27%), Positives = 100/202 (49%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
VD AY ++V + + + YN +I+ C+ G KA + M R G PD+VT+ I
Sbjct: 201 VDLAYELIVGVINGGVKVNCLVYNALISGFCRMGRIDKALAIKGFMSRNGCVPDLVTYNI 260
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
L++ E L++ M + G+ P L Y ++ CK +++ A+ ++
Sbjct: 261 LLNYCCDEVMLDEVVKLVESMERSGVEPDLYSYNELLKGFCKANQVDRAYLTMVKRMQTK 320
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
+ DV+SYN +I +CK ++ LF++M+ G+ PD +T+ ++I KE +A
Sbjct: 321 GMCDVVSYNTIIAAFCKARRIERGYELFEEMRRKGIQPDVITFTVLIEAFFKEGGSDVAK 380
Query: 543 EVWDEMMKNGFTLDSYLSETLI 608
++ D+M G D T++
Sbjct: 381 KLLDQMTTMGIVPDLIFYTTIV 402
Score = 97.4 bits (241), Expect = 4e-18
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 37/236 (15%)
Frame = +3
Query: 18 MMLVNKMEVKGLA-DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDS 194
+ L M +KG DVVSYN I+ ALCK+ + +++ + KG+ PD L+
Sbjct: 135 LQLFRTMPLKGREPDVVSYNIIVNALCKAKRVDEVARVWRSLIEKGLKPDFKVCAALVVG 194
Query: 195 FLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMA---------HGIFHD 347
GN +A L+ + G+ + ++Y +I C+ GRI+ A +G D
Sbjct: 195 LCSAGNVDLAYELIVGVINGGVKVNCLVYNALISGFCRMGRIDKALAIKGFMSRNGCVPD 254
Query: 348 MVEH--------------------------GIVPDVISYNALIGGYCKTYQVNEA-LHLF 446
+V + G+ PD+ SYN L+ G+CK QV+ A L +
Sbjct: 255 LVTYNILLNYCCDEVMLDEVVKLVESMERSGVEPDLYSYNELLKGFCKANQVDRAYLTMV 314
Query: 447 KKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSETLIRA 614
K+MQT G+C D V+Y II K ++I E+++EM + G D LI A
Sbjct: 315 KRMQTKGMC-DVVSYNTIIAAFCKARRIERGYELFEEMRRKGIQPDVITFTVLIEA 369
Score = 75.1 bits (183), Expect = 2e-11
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 1/181 (0%)
Frame = +3
Query: 69 YNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQ-M 245
Y + I+ K+G A KLF+EM + P + + I ++ + +A+S + +
Sbjct: 12 YRSQISYYVKAGLIDTAIKLFDEMSQTNSRPFSIDYNRFIGVLIRHSHLDLAQSYYRRHV 71
Query: 246 TKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQV 425
G + Y+ I LC ++ + DM G VPD+ ++N + C+ Q+
Sbjct: 72 IPNGFSLTPFTYSRFIAALCSVKNFSLIDYLLRDMDALGFVPDIWAFNIYLNLLCRENQL 131
Query: 426 NEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSETL 605
AL LF+ M G PD V+Y +I+ L K K++ VW +++ G D + L
Sbjct: 132 ETALQLFRTMPLKGREPDVVSYNIIVNALCKAKRVDEVARVWRSLIEKGLKPDFKVCAAL 191
Query: 606 I 608
+
Sbjct: 192 V 192
Score = 73.9 bits (180), Expect = 4e-11
Identities = 48/173 (27%), Positives = 75/173 (43%)
Frame = +3
Query: 66 SYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQM 245
+Y+ I ALC L +M G PD+ F I ++ +E A L M
Sbjct: 82 TYSRFIAALCSVKNFSLIDYLLRDMDALGFVPDIWAFNIYLNLLCRENQLETALQLFRTM 141
Query: 246 TKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQV 425
G P +V Y I++ LCK R++ ++ ++E G+ PD AL+ G C V
Sbjct: 142 PLKGREPDVVSYNIIVNALCKAKRVDEVARVWRSLIEKGLKPDFKVCAALVVGLCSAGNV 201
Query: 426 NEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLD 584
+ A L + GGV + + Y +I G + +I A + M +NG D
Sbjct: 202 DLAYELIVGVINGGVKVNCLVYNALISGFCRMGRIDKALAIKGFMSRNGCVPD 254
Score = 62.0 bits (149), Expect = 2e-07
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 1/203 (0%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEE-MGRKGISPDVVTFT 179
+D A + + + YN I L + A + + G S T++
Sbjct: 25 IDTAIKLFDEMSQTNSRPFSIDYNRFIGVLIRHSHLDLAQSYYRRHVIPNGFSLTPFTYS 84
Query: 180 ILIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEH 359
I + N + LL M +G P + + ++ LC+ ++ A +F M
Sbjct: 85 RFIAALCSVKNFSLIDYLLRDMDALGFVPDIWAFNIYLNLLCRENQLETALQLFRTMPLK 144
Query: 360 GIVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLA 539
G PDV+SYN ++ CK +V+E +++ + G+ PD ++ GL + LA
Sbjct: 145 GREPDVVSYNIIVNALCKAKRVDEVARVWRSLIEKGLKPDFKVCAALVVGLCSAGNVDLA 204
Query: 540 CEVWDEMMKNGFTLDSYLSETLI 608
E+ ++ G ++ + LI
Sbjct: 205 YELIVGVINGGVKVNCLVYNALI 227
>ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568860947|ref|XP_006483973.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 517
Score = 260 bits (664), Expect = 3e-67
Identities = 127/209 (60%), Positives = 162/209 (77%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
+DKAYM +V KME KGL D VSYNT+I A CK G R+AYKLFEEM R+GI DVVTFTI
Sbjct: 305 LDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTI 364
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
LI +FL+EG+S +A+ LL+QM + L P +LYTTIID LCK+ I A+G+F DMVE G
Sbjct: 365 LIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQG 424
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
I PDVISYNALI G CK+ +V+EA+HL+++MQ G PDEVT+KL+I GL++EKK+ LAC
Sbjct: 425 ITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELAC 484
Query: 543 EVWDEMMKNGFTLDSYLSETLIRAINSKE 629
+WD+MM+ GFTLD +S LI AI+ ++
Sbjct: 485 RLWDQMMEKGFTLDKTVSAALIEAIHLQD 513
Score = 99.0 bits (245), Expect = 1e-18
Identities = 59/211 (27%), Positives = 111/211 (52%), Gaps = 1/211 (0%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
VD AY + V M+ K V+ YN +I+ C++G +A + M R G PD+VT+
Sbjct: 200 VDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRICRAMAIKSFMKRNGCEPDLVTYNA 259
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
+++ + E A+ L+ +M G+ P + Y ++ LC + +++ A+ +E
Sbjct: 260 ILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAK 319
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
+ D +SYN +I +CK Q A LF++M+ G+ D VT+ ++I+ ++E ++A
Sbjct: 320 GLRDKVSYNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAE 379
Query: 543 EVWDEMMKNGFTLDSYLSETLIRAI-NSKEI 632
++ ++M + D L T+I + S+EI
Sbjct: 380 KLLNQMRGMNLSPDRILYTTIIDCLCKSREI 410
Score = 88.2 bits (217), Expect = 2e-15
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 37/232 (15%)
Frame = +3
Query: 30 NKMEVKGLA-DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPD-------------- 164
+KM KG D V+Y +I LCK+ KA + +E M GI PD
Sbjct: 138 HKMVSKGREPDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGD 197
Query: 165 ---------------------VVTFTILIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLY 281
V+ + LI F + G A ++ M + G P LV Y
Sbjct: 198 GKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRICRAMAIKSFMKRNGCEPDLVTY 257
Query: 282 TTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVNEA-LHLFKKMQ 458
I+++ C ++ A + +M GI PDV SYN L+ G C + Q+++A + + KKM+
Sbjct: 258 NAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKME 317
Query: 459 TGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSETLIRA 614
G+ D+V+Y +I K + A ++++EM + G LD LI+A
Sbjct: 318 AKGL-RDKVSYNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTILIKA 368
Score = 83.6 bits (205), Expect = 5e-14
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 3/217 (1%)
Frame = +3
Query: 21 MLVNKMEVKG-LADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSF 197
+L++ M+ G L D+ ++N + L A ++F +M KG PD VT+TI+ID
Sbjct: 100 ILLDNMDKLGYLPDIWAFNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYTIVIDGL 159
Query: 198 LKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDV 377
K A + M + G+ P ++ LC G++++A+ + ++ + V
Sbjct: 160 CKAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGV 219
Query: 378 ISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDE 557
+ YNALI G+C+T ++ A+ + M+ G PD VTY I+ E + A ++ E
Sbjct: 220 LIYNALISGFCRTGRICRAMAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVME 279
Query: 558 MMKNGFTLDSYLSETLIRAI-NSKEI*Q-YVYYVSRL 662
M G D Y L++ + NS ++ + Y++ V ++
Sbjct: 280 MESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKM 316
Score = 77.8 bits (190), Expect = 3e-12
Identities = 46/168 (27%), Positives = 78/168 (46%)
Frame = +3
Query: 63 VSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQ 242
+ YN I L + +++M G S T++ I + N + LLD
Sbjct: 45 IDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDN 104
Query: 243 MTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQ 422
M K+G P + + ++ L RI++A +FH MV G PD ++Y +I G CK +
Sbjct: 105 MDKLGYLPDIWAFNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYTIVIDGLCKAKK 164
Query: 423 VNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMK 566
++A+ ++ M G+ PD ++ GL + K+ LA E+ MK
Sbjct: 165 FDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMK 212
Score = 76.6 bits (187), Expect = 6e-12
Identities = 46/180 (25%), Positives = 85/180 (47%)
Frame = +3
Query: 69 YNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQMT 248
Y I+ L K+G +A +F+EM + + + I ++ + + QM
Sbjct: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Query: 249 KIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVN 428
+G + Y+ I LC+ + + + +M + G +PD+ ++N + +++
Sbjct: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLGYLPDIWAFNIYLNLLFHENRID 131
Query: 429 EALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSETLI 608
AL +F KM + G PD VTY ++I GL K KK A + W+ M++NG D+ L+
Sbjct: 132 LALEVFHKMVSKGREPDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACAALV 191
>ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citrus clementina]
gi|557540418|gb|ESR51462.1| hypothetical protein
CICLE_v10031251mg [Citrus clementina]
Length = 517
Score = 260 bits (664), Expect = 3e-67
Identities = 127/209 (60%), Positives = 162/209 (77%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
+DKAYM +V KME KGL D VSYNT+I A CK G R+AYKLFEEM R+GI DVVTFTI
Sbjct: 305 LDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTI 364
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
LI +FL+EG+S +A+ LL+QM + L P +LYTTIID LCK+ I A+G+F DMVE G
Sbjct: 365 LIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQG 424
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
I PDVISYNALI G CK+ +V+EA+HL+++MQ G PDEVT+KL+I GL++EKK+ LAC
Sbjct: 425 ITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELAC 484
Query: 543 EVWDEMMKNGFTLDSYLSETLIRAINSKE 629
+WD+MM+ GFTLD +S LI AI+ ++
Sbjct: 485 RLWDQMMEKGFTLDKTVSAALIEAIHLQD 513
Score = 100 bits (250), Expect = 3e-19
Identities = 60/211 (28%), Positives = 111/211 (52%), Gaps = 1/211 (0%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
VD AY V M+ K V+ YN +I+ C++G R+A + M R G PD+VT+
Sbjct: 200 VDLAYERTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKRNGCEPDLVTYNA 259
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
+++ + E A+ L+ +M G+ P + Y ++ LC + +++ A+ +E
Sbjct: 260 ILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAK 319
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
+ D +SYN +I +CK Q A LF++M+ G+ D VT+ ++I+ ++E ++A
Sbjct: 320 GLRDKVSYNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAE 379
Query: 543 EVWDEMMKNGFTLDSYLSETLIRAI-NSKEI 632
++ ++M + D L T+I + S+EI
Sbjct: 380 KLLNQMRGMNLSPDRILYTTIIDCLCKSREI 410
Score = 84.3 bits (207), Expect = 3e-14
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 7/221 (3%)
Frame = +3
Query: 21 MLVNKMEVKG-LADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSF 197
+L++ M+ G L D+ ++N + L A ++F +M KG PD VT+TI+ID
Sbjct: 100 ILLDNMDKLGYLPDIWAFNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYTIVIDGL 159
Query: 198 LKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAH----GIFHDMVEHGI 365
K A + M + G+ P ++ LC G++++A+ G VE G
Sbjct: 160 CKAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYERTVGAMKGKVEFG- 218
Query: 366 VPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACE 545
V+ YNALI G+C+T ++ A+ + M+ G PD VTY I+ E + A +
Sbjct: 219 ---VLIYNALISGFCRTGRIRRAMAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAEK 275
Query: 546 VWDEMMKNGFTLDSYLSETLIRAI-NSKEI*Q-YVYYVSRL 662
+ EM G D Y L++ + NS ++ + Y++ V ++
Sbjct: 276 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKM 316
Score = 76.6 bits (187), Expect = 6e-12
Identities = 46/180 (25%), Positives = 85/180 (47%)
Frame = +3
Query: 69 YNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQMT 248
Y I+ L K+G +A +F+EM + + + I ++ + + QM
Sbjct: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Query: 249 KIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVN 428
+G + Y+ I LC+ + + + +M + G +PD+ ++N + +++
Sbjct: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLGYLPDIWAFNIYLNLLFHENRID 131
Query: 429 EALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSETLI 608
AL +F KM + G PD VTY ++I GL K KK A + W+ M++NG D+ L+
Sbjct: 132 LALEVFHKMVSKGREPDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACAALV 191
Score = 76.6 bits (187), Expect = 6e-12
Identities = 44/161 (27%), Positives = 75/161 (46%)
Frame = +3
Query: 63 VSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQ 242
+ YN I L + +++M G S T++ I + N + LLD
Sbjct: 45 IDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDN 104
Query: 243 MTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQ 422
M K+G P + + ++ L RI++A +FH MV G PD ++Y +I G CK +
Sbjct: 105 MDKLGYLPDIWAFNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYTIVIDGLCKAKK 164
Query: 423 VNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACE 545
++A+ ++ M G+ PD ++ GL + K+ LA E
Sbjct: 165 FDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYE 205
>ref|XP_006417164.1| hypothetical protein EUTSA_v10007381mg [Eutrema salsugineum]
gi|557094935|gb|ESQ35517.1| hypothetical protein
EUTSA_v10007381mg [Eutrema salsugineum]
Length = 517
Score = 258 bits (659), Expect = 1e-66
Identities = 121/203 (59%), Positives = 159/203 (78%)
Frame = +3
Query: 6 DKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTIL 185
DK Y ++V +ME +G DVVSY+T+I C++ RKAYKLFEEM +KGI +VVT+T L
Sbjct: 307 DKCYSLMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYKLFEEMRQKGIVTNVVTYTSL 366
Query: 186 IDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGI 365
I +FL+EGNS VAK LLDQMT++GL P + YTTI+DHLCK+G ++ A+G+F+DM+EHGI
Sbjct: 367 IKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHGI 426
Query: 366 VPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACE 545
PD ISYNALI G C++ +V EA+ LFK MQ+ CPDE+T+K II GLI+EKK+S A +
Sbjct: 427 TPDAISYNALISGLCRSCRVTEAMKLFKDMQSKECCPDELTFKFIIGGLIREKKLSAAYK 486
Query: 546 VWDEMMKNGFTLDSYLSETLIRA 614
VWD+MM GFTLD +S+TLI+A
Sbjct: 487 VWDQMMDKGFTLDRDVSDTLIKA 509
Score = 98.6 bits (244), Expect = 2e-18
Identities = 54/203 (26%), Positives = 105/203 (51%), Gaps = 1/203 (0%)
Frame = +3
Query: 3 VDKAYMMLVNKME-VKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFT 179
VD AY M+ +++ + V YN +I+ C++G KA L M + G SPD+VT+
Sbjct: 200 VDLAYEMVAEEIKSARVKLSTVVYNALISGFCRAGRIEKAEALKSFMSKSGCSPDLVTYN 259
Query: 180 ILIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEH 359
+L++ + A+ ++ +M + G+ P Y ++ C+ G + + + +E
Sbjct: 260 VLLNYYYDHNMLKKAEGVMSEMVRSGIQPDAYSYNQLLKRHCRVGVPDKCYSLMVKEMEP 319
Query: 360 GIVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLA 539
DV+SY+ LI +C+ +A LF++M+ G+ + VTY +I+ ++E S+A
Sbjct: 320 RGFCDVVSYSTLIETFCRASNTRKAYKLFEEMRQKGIVTNVVTYTSLIKAFLREGNSSVA 379
Query: 540 CEVWDEMMKNGFTLDSYLSETLI 608
++ D+M + G + D T++
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTIL 402
Score = 87.8 bits (216), Expect = 3e-15
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 2/198 (1%)
Frame = +3
Query: 24 LVNKMEVKG-LADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFL 200
L+ ME G + D+ ++N + LC+ A + F M R+G PDVV++TILI+
Sbjct: 101 LLRDMETLGYIPDIWAFNIYLDLLCREREVGFAVQTFFCMVRRGREPDVVSYTILINGLF 160
Query: 201 KEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVP-DV 377
+ G A ++M + G+ P +++ LC ++++A+ + + ++ V
Sbjct: 161 RAGKVTDAVEFWNEMIRSGINPDNKACASLVVGLCDARKVDLAYEMVAEEIKSARVKLST 220
Query: 378 ISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDE 557
+ YNALI G+C+ ++ +A L M G PD VTY +++ + A V E
Sbjct: 221 VVYNALISGFCRAGRIEKAEALKSFMSKSGCSPDLVTYNVLLNYYYDHNMLKKAEGVMSE 280
Query: 558 MMKNGFTLDSYLSETLIR 611
M+++G D+Y L++
Sbjct: 281 MVRSGIQPDAYSYNQLLK 298
Score = 85.1 bits (209), Expect = 2e-14
Identities = 50/182 (27%), Positives = 89/182 (48%)
Frame = +3
Query: 63 VSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQ 242
++Y + I L KSG A ++F+E+ + I +KE +A++L
Sbjct: 10 LAYRSRIAYLVKSGMIDNAVQVFDELRHSSFRVFSSDYNRFIGVLVKESRFELAEALYRD 69
Query: 243 MTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQ 422
MT +G Y+ I LCK + ++ + DM G +PD+ ++N + C+ +
Sbjct: 70 MTPMGFSLIPFTYSRFISGLCKVRKFDLIDALLRDMETLGYIPDIWAFNIYLDLLCRERE 129
Query: 423 VNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSET 602
V A+ F M G PD V+Y ++I GL + K++ A E W+EM+++G D+ +
Sbjct: 130 VGFAVQTFFCMVRRGREPDVVSYTILINGLFRAGKVTDAVEFWNEMIRSGINPDNKACAS 189
Query: 603 LI 608
L+
Sbjct: 190 LV 191
Score = 82.0 bits (201), Expect = 2e-13
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 37/223 (16%)
Frame = +3
Query: 57 DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPD------------------------ 164
DVVSY +I L ++G A + + EM R GI+PD
Sbjct: 148 DVVSYTILINGLFRAGKVTDAVEFWNEMIRSGINPDNKACASLVVGLCDARKVDLAYEMV 207
Query: 165 ------------VVTFTILIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCK 308
V + LI F + G A++L M+K G P LV Y ++++
Sbjct: 208 AEEIKSARVKLSTVVYNALISGFCRAGRIEKAEALKSFMSKSGCSPDLVTYNVLLNYYYD 267
Query: 309 TGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVNEALHLF-KKMQTGGVCPDEV 485
+ A G+ +MV GI PD SYN L+ +C+ ++ L K+M+ G C D V
Sbjct: 268 HNMLKKAEGVMSEMVRSGIQPDAYSYNQLLKRHCRVGVPDKCYSLMVKEMEPRGFC-DVV 326
Query: 486 TYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSETLIRA 614
+Y +I + A ++++EM + G + +LI+A
Sbjct: 327 SYSTLIETFCRASNTRKAYKLFEEMRQKGIVTNVVTYTSLIKA 369
Score = 76.3 bits (186), Expect = 8e-12
Identities = 48/167 (28%), Positives = 75/167 (44%)
Frame = +3
Query: 69 YNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQMT 248
YN I L K A L+ +M G S T++ I K + +LL M
Sbjct: 47 YNRFIGVLVKESRFELAEALYRDMTPMGFSLIPFTYSRFISGLCKVRKFDLIDALLRDME 106
Query: 249 KIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVN 428
+G P + + +D LC+ + A F MV G PDV+SY LI G + +V
Sbjct: 107 TLGYIPDIWAFNIYLDLLCREREVGFAVQTFFCMVRRGREPDVVSYTILINGLFRAGKVT 166
Query: 429 EALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKN 569
+A+ + +M G+ PD ++ GL +K+ LA E+ E +K+
Sbjct: 167 DAVEFWNEMIRSGINPDNKACASLVVGLCDARKVDLAYEMVAEEIKS 213
Score = 56.6 bits (135), Expect = 7e-06
Identities = 34/101 (33%), Positives = 51/101 (50%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
VDKAY + + +E D +SYN +I+ LC+S +A KLF++M K PD +TF
Sbjct: 411 VDKAYGVFNDMIEHGITPDAISYNALISGLCRSCRVTEAMKLFKDMQSKECCPDELTFKF 470
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLC 305
+I ++E A + DQM G + T+I C
Sbjct: 471 IIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
>ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
gi|449494962|ref|XP_004159696.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
Length = 514
Score = 253 bits (646), Expect = 4e-65
Identities = 123/209 (58%), Positives = 162/209 (77%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
+DKAY L+N M KGL D VSYNT+I ALCKS RKAY+LFEEMG+K ++PDV TF
Sbjct: 305 LDKAYK-LMNTMWEKGLCDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFAT 363
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
LI +FL EG+ +AK LL MT+ L P L+ YTT++D+ CKT +I MA G+F DM+E G
Sbjct: 364 LIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIG 423
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLAC 542
I PDV+SYNALI G CK +V+EA+ L+++MQ G PDEVT+KLII GL+++K++SLAC
Sbjct: 424 ISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLAC 483
Query: 543 EVWDEMMKNGFTLDSYLSETLIRAINSKE 629
+VWD+MM+ G+TLD +LSETLI+AI S++
Sbjct: 484 QVWDQMMEKGYTLDKFLSETLIKAIRSRD 512
Score = 100 bits (248), Expect = 5e-19
Identities = 53/173 (30%), Positives = 96/173 (55%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
VD AY + V +M+ + + + +N++++ CKSG KA + M + G PD++T+ I
Sbjct: 200 VDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNI 259
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHG 362
L++ F +A + +M +IG+ P + Y ++ LCK R++ A+ + + M E G
Sbjct: 260 LLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKG 319
Query: 363 IVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKE 521
+ D +SYN +IG CK++ +A LF++M V PD T+ +I+ + E
Sbjct: 320 LC-DTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIE 371
Score = 91.3 bits (225), Expect = 3e-16
Identities = 60/197 (30%), Positives = 102/197 (51%), Gaps = 1/197 (0%)
Frame = +3
Query: 30 NKMEVKGLA-DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKE 206
++M KG DVV+Y I+ LCK+ KA + + M KG+SPD+ T L+
Sbjct: 138 DEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDG 197
Query: 207 GNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISY 386
G +A L K + + +++ +++ CK+GRI+ A I M +HG PD+I+Y
Sbjct: 198 GKVDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITY 257
Query: 387 NALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMK 566
N L+ +C + A KKM+ G+ PD +Y +++GL K ++ A ++ + M +
Sbjct: 258 NILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWE 317
Query: 567 NGFTLDSYLSETLIRAI 617
G D+ T+I A+
Sbjct: 318 KGL-CDTVSYNTVIGAL 333
Score = 78.6 bits (192), Expect = 2e-12
Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 35/219 (15%)
Frame = +3
Query: 66 SYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQM 245
+Y+ I+ALC+ +L E+M + G PD+ F I ++ +E +A D+M
Sbjct: 81 TYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEM 140
Query: 246 TKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDV---------------- 377
G P +V YT I+D LCK + + A + MV G+ PD+
Sbjct: 141 VAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKV 200
Query: 378 -------------------ISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLI 500
+ +N+L+ G+CK+ ++++AL + M G PD +TY ++
Sbjct: 201 DLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNIL 260
Query: 501 IRGLIKEKKISLACEVWDEMMKNGFTLDSYLSETLIRAI 617
+ + LA + +M + G D Y L++ +
Sbjct: 261 LNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGL 299
Score = 65.5 bits (158), Expect = 1e-08
Identities = 43/180 (23%), Positives = 80/180 (44%)
Frame = +3
Query: 69 YNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQMT 248
YN I L A + M +G S T++ I + + N + LL+ M
Sbjct: 47 YNRFIGVLISRSRFDLAESYYSRMIPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMK 106
Query: 249 KIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVN 428
++G P + + ++ L + + +A F +MV G PDV++Y ++ CK Q +
Sbjct: 107 QLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYD 166
Query: 429 EALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSETLI 608
+A+ ++ M G+ PD ++ GL K+ LA E+ MK ++ + +L+
Sbjct: 167 KAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDLAYELTVGEMKGEMKFNNLIFNSLM 226
Score = 63.2 bits (152), Expect = 7e-08
Identities = 45/185 (24%), Positives = 78/185 (42%)
Frame = +3
Query: 54 ADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSL 233
A+ + + IT K G +A ++F+EM + + I + +A+S
Sbjct: 7 ANRLVFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESY 66
Query: 234 LDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCK 413
+M G + Y+ I LC+ + + DM + G +PD+ ++N + +
Sbjct: 67 YSRMIPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFR 126
Query: 414 TYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYL 593
+ AL F +M G PD VTY +I+ L K K+ A E W M+ G + D
Sbjct: 127 ENLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKA 186
Query: 594 SETLI 608
L+
Sbjct: 187 CTALV 191
>ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335822|gb|EFH66239.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 517
Score = 246 bits (629), Expect = 4e-63
Identities = 116/203 (57%), Positives = 156/203 (76%)
Frame = +3
Query: 6 DKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTIL 185
D+ Y ++ +ME +G DVVSY+T+I C++ +KAYKLFEEM +KGI +VVTFT L
Sbjct: 307 DRCYSFMLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSL 366
Query: 186 IDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGI 365
I +FL+EGNS VAK LLDQMT++GL P + YTTI+DHLCK+G ++ A+GIF+DM+EH I
Sbjct: 367 IKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEI 426
Query: 366 VPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACE 545
PD ISYN+LI G C++ +V EA+ LF+ M+ CPDE+T+K II GLI+EKK+S A +
Sbjct: 427 TPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYK 486
Query: 546 VWDEMMKNGFTLDSYLSETLIRA 614
VWD+MM GFTLD +S+TLI+A
Sbjct: 487 VWDQMMDKGFTLDRDVSDTLIKA 509
Score = 88.2 bits (217), Expect = 2e-15
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 2/198 (1%)
Frame = +3
Query: 24 LVNKMEVKG-LADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFL 200
L+ ME G + D+ ++N + LC+ A + F M ++G PDVV++TILI+
Sbjct: 101 LLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLF 160
Query: 201 KEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVP-DV 377
+ G A + + M + G+ P ++ LC ++++A+ + + ++ V +
Sbjct: 161 RAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSI 220
Query: 378 ISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDE 557
+ YNALI G+CK ++ +A L M G PD VTY +++ + A V E
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTE 280
Query: 558 MMKNGFTLDSYLSETLIR 611
M+++G LD+Y L++
Sbjct: 281 MVRSGIQLDAYSYNQLLK 298
Score = 81.3 bits (199), Expect = 3e-13
Identities = 48/182 (26%), Positives = 87/182 (47%)
Frame = +3
Query: 63 VSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQ 242
++Y + I L KSG A ++F+EM + I +KE +A+++
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRD 69
Query: 243 MTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQ 422
M +G Y+ I LCK + + + DM G +PD+ ++N + C+ +
Sbjct: 70 MMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENK 129
Query: 423 VNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSET 602
V A+ F M G PD V+Y ++I GL + K++ A E+W+ M+++G + D+
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 603 LI 608
L+
Sbjct: 190 LV 191
Score = 79.3 bits (194), Expect = 1e-12
Identities = 48/167 (28%), Positives = 77/167 (46%)
Frame = +3
Query: 69 YNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQMT 248
YN I L K A ++ +M G S T++ I K + +LL M
Sbjct: 47 YNRFIGVLVKESRFELAEAIYRDMMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDME 106
Query: 249 KIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVN 428
+G P + + +D LC+ ++ A F MV+ G PDV+SY LI G + +V
Sbjct: 107 TLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 429 EALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKN 569
+A+ ++ M GV PD ++ GL +K+ LA E+ E +K+
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKS 213
Score = 62.8 bits (151), Expect = 1e-07
Identities = 36/101 (35%), Positives = 54/101 (53%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
VDKAY + + +E + D +SYN++I+ LC+SG +A KLFE+M K PD +TF
Sbjct: 411 VDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKF 470
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLC 305
+I ++E A + DQM G + T+I C
Sbjct: 471 IIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
>ref|XP_006304861.1| hypothetical protein CARUB_v10012598mg [Capsella rubella]
gi|482573572|gb|EOA37759.1| hypothetical protein
CARUB_v10012598mg [Capsella rubella]
Length = 517
Score = 243 bits (621), Expect = 3e-62
Identities = 116/203 (57%), Positives = 153/203 (75%)
Frame = +3
Query: 6 DKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTIL 185
DK Y +V +ME +G DVVSY+T+I C++ RKAYKLFEEM +KGI +VVT+T L
Sbjct: 307 DKCYSFMVKEMEPRGFCDVVSYSTLIETYCRASNTRKAYKLFEEMRQKGIVTNVVTYTSL 366
Query: 186 IDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGI 365
I +FL+EG S VAK LLDQMT++GL P + YTTI++HLCK+G I+ A+G+F DM+EH I
Sbjct: 367 IKAFLREGKSSVAKKLLDQMTELGLSPDRIFYTTILNHLCKSGNIDKAYGVFSDMIEHRI 426
Query: 366 VPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACE 545
PD ISYN+LI G C+ +V EA+ LF+ MQ+ CPDE+T+K II GLI+E K+S A +
Sbjct: 427 TPDAISYNSLICGLCRACRVTEAIKLFEDMQSKECCPDELTFKFIIGGLIRENKVSAAYK 486
Query: 546 VWDEMMKNGFTLDSYLSETLIRA 614
VWD+MM GFTLD +S+TLI+A
Sbjct: 487 VWDQMMDKGFTLDRDVSDTLIKA 509
Score = 91.3 bits (225), Expect = 3e-16
Identities = 53/203 (26%), Positives = 102/203 (50%), Gaps = 1/203 (0%)
Frame = +3
Query: 3 VDKAYMMLVNKME-VKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFT 179
VD AY M+ +++ + V YN +I+ CK+G KA L M + PD+VT+
Sbjct: 200 VDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSFMNKIECEPDLVTYN 259
Query: 180 ILIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEH 359
+L++ + + A+ ++ +M + G+ Y ++ C+ + + +E
Sbjct: 260 VLLNYYYENNLLKKAEGVMTEMVRSGVELDAYSYNQLLKRHCRVSHPDKCYSFMVKEMEP 319
Query: 360 GIVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLA 539
DV+SY+ LI YC+ +A LF++M+ G+ + VTY +I+ ++E K S+A
Sbjct: 320 RGFCDVVSYSTLIETYCRASNTRKAYKLFEEMRQKGIVTNVVTYTSLIKAFLREGKSSVA 379
Query: 540 CEVWDEMMKNGFTLDSYLSETLI 608
++ D+M + G + D T++
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTIL 402
Score = 84.7 bits (208), Expect = 2e-14
Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 2/198 (1%)
Frame = +3
Query: 24 LVNKMEVKG-LADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFL 200
L+ ME G + D+ ++N + LC+ A + F M ++G PDVV++TILI+
Sbjct: 101 LLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLF 160
Query: 201 KEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVP-DV 377
+ G A + ++M + G+ P ++ LC ++++A+ + + ++ V
Sbjct: 161 RAGKVTDAVEIWNEMIRSGVRPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLST 220
Query: 378 ISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDE 557
+ YNALI G+CK ++ +A L M PD VTY +++ + + A V E
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSFMNKIECEPDLVTYNVLLNYYYENNLLKKAEGVMTE 280
Query: 558 MMKNGFTLDSYLSETLIR 611
M+++G LD+Y L++
Sbjct: 281 MVRSGVELDAYSYNQLLK 298
Score = 82.4 bits (202), Expect = 1e-13
Identities = 49/182 (26%), Positives = 88/182 (48%)
Frame = +3
Query: 63 VSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQ 242
++Y + I L KSG A ++F+EM + I +KE +A+++
Sbjct: 10 LAYRSRIAKLVKSGIIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYWD 69
Query: 243 MTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQ 422
M +G Y+ I LCK + ++ + DM G +PD+ ++N + C+ +
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLRDMETLGFIPDIWAFNIYLDLLCRENK 129
Query: 423 VNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSET 602
V A+ F M G PD V+Y ++I GL + K++ A E+W+EM+++G D+
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNEMIRSGVRPDNKACAA 189
Query: 603 LI 608
L+
Sbjct: 190 LV 191
Score = 78.6 bits (192), Expect = 2e-12
Identities = 48/167 (28%), Positives = 78/167 (46%)
Frame = +3
Query: 69 YNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQMT 248
YN I L K A ++ +M G S T++ I K + +LL M
Sbjct: 47 YNRFIGVLVKESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLRDME 106
Query: 249 KIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVN 428
+G P + + +D LC+ ++ A F MV+ G PDV+SY LI G + +V
Sbjct: 107 TLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 429 EALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKN 569
+A+ ++ +M GV PD ++ GL +K+ LA E+ E +K+
Sbjct: 167 DAVEIWNEMIRSGVRPDNKACAALVVGLCHARKVDLAYEMVAEEIKS 213
Score = 58.9 bits (141), Expect = 1e-06
Identities = 33/101 (32%), Positives = 52/101 (51%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
+DKAY + + +E + D +SYN++I LC++ +A KLFE+M K PD +TF
Sbjct: 411 IDKAYGVFSDMIEHRITPDAISYNSLICGLCRACRVTEAIKLFEDMQSKECCPDELTFKF 470
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLC 305
+I ++E A + DQM G + T+I C
Sbjct: 471 IIGGLIRENKVSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
>ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis
thaliana] gi|332190841|gb|AEE28962.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 243 bits (619), Expect = 5e-62
Identities = 114/203 (56%), Positives = 155/203 (76%)
Frame = +3
Query: 6 DKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTIL 185
DK Y +V +ME +G DVVSY+T+I C++ RKAY+LFEEM +KG+ +VVT+T L
Sbjct: 307 DKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSL 366
Query: 186 IDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGI 365
I +FL+EGNS VAK LLDQMT++GL P + YTTI+DHLCK+G ++ A+G+F+DM+EH I
Sbjct: 367 IKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEI 426
Query: 366 VPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACE 545
PD ISYN+LI G C++ +V EA+ LF+ M+ CPDE+T+K II GLI+ KK+S A +
Sbjct: 427 TPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYK 486
Query: 546 VWDEMMKNGFTLDSYLSETLIRA 614
VWD+MM GFTLD +S+TLI+A
Sbjct: 487 VWDQMMDKGFTLDRDVSDTLIKA 509
Score = 89.7 bits (221), Expect = 7e-16
Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 1/203 (0%)
Frame = +3
Query: 3 VDKAYMMLVNKME-VKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFT 179
VD AY M+ +++ + V YN +I+ CK+G KA L M + G PD+VT+
Sbjct: 200 VDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYN 259
Query: 180 ILIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEH 359
+L++ + A+ ++ +M + G+ Y ++ C+ + + +E
Sbjct: 260 VLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEP 319
Query: 360 GIVPDVISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLA 539
DV+SY+ LI +C+ +A LF++M+ G+ + VTY +I+ ++E S+A
Sbjct: 320 RGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVA 379
Query: 540 CEVWDEMMKNGFTLDSYLSETLI 608
++ D+M + G + D T++
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTIL 402
Score = 87.8 bits (216), Expect = 3e-15
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 2/198 (1%)
Frame = +3
Query: 24 LVNKMEVKG-LADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFL 200
L++ ME G + D+ ++N + LC+ A + F M ++G PDVV++TILI+
Sbjct: 101 LLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLF 160
Query: 201 KEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVP-DV 377
+ G A + + M + G+ P ++ LC ++++A+ + + ++ V
Sbjct: 161 RAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLST 220
Query: 378 ISYNALIGGYCKTYQVNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDE 557
+ YNALI G+CK ++ +A L M G PD VTY +++ + A V E
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAE 280
Query: 558 MMKNGFTLDSYLSETLIR 611
M+++G LD+Y L++
Sbjct: 281 MVRSGIQLDAYSYNQLLK 298
Score = 83.2 bits (204), Expect = 7e-14
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 37/223 (16%)
Frame = +3
Query: 57 DVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPD------------------------ 164
DVVSY +I L ++G A +++ M R G+SPD
Sbjct: 148 DVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMV 207
Query: 165 ------------VVTFTILIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLCK 308
V + LI F K G A++L M+KIG P LV Y ++++
Sbjct: 208 AEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYD 267
Query: 309 TGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVNEALH-LFKKMQTGGVCPDEV 485
+ A G+ +MV GI D SYN L+ +C+ ++ + + K+M+ G C D V
Sbjct: 268 NNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVV 326
Query: 486 TYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSETLIRA 614
+Y +I + A +++EM + G ++ +LI+A
Sbjct: 327 SYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKA 369
Score = 80.1 bits (196), Expect = 6e-13
Identities = 47/182 (25%), Positives = 88/182 (48%)
Frame = +3
Query: 63 VSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQ 242
++Y + I L KSG A ++F+EM + I ++E +A+++
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 243 MTKIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQ 422
M +G Y+ I LCK + ++ + DM G +PD+ ++N + C+ +
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 423 VNEALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKNGFTLDSYLSET 602
V A+ F M G PD V+Y ++I GL + K++ A E+W+ M+++G + D+
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 603 LI 608
L+
Sbjct: 190 LV 191
Score = 78.6 bits (192), Expect = 2e-12
Identities = 47/167 (28%), Positives = 77/167 (46%)
Frame = +3
Query: 69 YNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTILIDSFLKEGNSIVAKSLLDQMT 248
YN I L + A ++ +M G S T++ I K + +LL M
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 249 KIGLFPSLVLYTTIIDHLCKTGRINMAHGIFHDMVEHGIVPDVISYNALIGGYCKTYQVN 428
+G P + + +D LC+ ++ A F MV+ G PDV+SY LI G + +V
Sbjct: 107 TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 429 EALHLFKKMQTGGVCPDEVTYKLIIRGLIKEKKISLACEVWDEMMKN 569
+A+ ++ M GV PD ++ GL +K+ LA E+ E +K+
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKS 213
Score = 60.1 bits (144), Expect = 6e-07
Identities = 35/101 (34%), Positives = 53/101 (52%)
Frame = +3
Query: 3 VDKAYMMLVNKMEVKGLADVVSYNTIITALCKSGGNRKAYKLFEEMGRKGISPDVVTFTI 182
VDKAY + + +E + D +SYN++I+ LC+SG +A KLFE+M K PD +TF
Sbjct: 411 VDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKF 470
Query: 183 LIDSFLKEGNSIVAKSLLDQMTKIGLFPSLVLYTTIIDHLC 305
+I ++ A + DQM G + T+I C
Sbjct: 471 IIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511