BLASTX nr result

ID: Mentha24_contig00043367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00043367
         (503 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU44181.1| hypothetical protein MIMGU_mgv1a008346mg [Mimulus...    80   2e-13
ref|XP_003633774.1| PREDICTED: uncharacterized protein LOC100853...    64   3e-08
emb|CBI21228.3| unnamed protein product [Vitis vinifera]               64   3e-08
ref|XP_004962982.1| PREDICTED: polyadenylate-binding protein, cy...    62   1e-07
ref|XP_004962981.1| PREDICTED: polyadenylate-binding protein, cy...    62   1e-07
tpg|DAA47174.1| TPA: hypothetical protein ZEAMMB73_366443 [Zea m...    59   5e-07
gb|ACF86800.2| unknown [Zea mays] gi|414868619|tpg|DAA47176.1| T...    59   5e-07
ref|NP_001130787.1| uncharacterized protein LOC100191891 [Zea ma...    59   5e-07
ref|XP_002442379.1| hypothetical protein SORBIDRAFT_08g019140 [S...    58   1e-06
ref|XP_006338380.1| PREDICTED: uncharacterized protein LOC102589...    58   2e-06
gb|EMT11921.1| Heterogeneous nuclear ribonucleoprotein A1 [Aegil...    57   3e-06
ref|XP_004232173.1| PREDICTED: uncharacterized protein LOC101263...    57   3e-06
ref|NP_001177024.1| Os12g0577100 [Oryza sativa Japonica Group] g...    56   5e-06
gb|EEE53482.1| hypothetical protein OsJ_36631 [Oryza sativa Japo...    56   5e-06
gb|EEC69559.1| hypothetical protein OsI_38857 [Oryza sativa Indi...    56   5e-06
gb|AFB33267.1| hypothetical protein 2_2799_03, partial [Pinus ce...    55   8e-06

>gb|EYU44181.1| hypothetical protein MIMGU_mgv1a008346mg [Mimulus guttatus]
          Length = 376

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 47/98 (47%), Positives = 60/98 (61%)
 Frame = +2

Query: 8   IPRTIVEEGSNSSRFEATPPQPTASYGRVPVKIEDRRLSPPQVGLTSQSYARMAPPATNL 187
           +PR  + E  + S +EATP  P  SYG   ++ E+ R S       + S +  A    +L
Sbjct: 273 VPRIGMLEERSHSPYEATPVPPL-SYGSFGLRTEEVRYSSAIQTAPNSSASPYARLGASL 331

Query: 188 ISDVRAVSGQQAAPRPQMRFDPFTGEPYKFDPFTGEPI 301
            S+ RA SGQQ  PR Q+RFDP+TGEPYKFDPFTGEPI
Sbjct: 332 TSEARAGSGQQP-PRQQIRFDPYTGEPYKFDPFTGEPI 368


>ref|XP_003633774.1| PREDICTED: uncharacterized protein LOC100853981 [Vitis vinifera]
          Length = 787

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 44/112 (39%), Positives = 58/112 (51%), Gaps = 15/112 (13%)
 Frame = +2

Query: 32  GSNSSRFEATPPQP------TASYGRVPV-------KIEDRRLSPP-QVGLTSQSYARMA 169
           G+ ++R++     P      T SY   P+       K+E+   +P  +  ++S SY R  
Sbjct: 677 GTTAARYDGYETSPALSRYSTYSYTDYPLSRQLGFDKLEETSPTPLYRAAVSSSSYGRAE 736

Query: 170 PPATNLISDVRAVSGQQAAP-RPQMRFDPFTGEPYKFDPFTGEPIIHPGNNS 322
                   D R ++   A P RPQMRFDPFTGEPYKFDPFTGEPI   G  S
Sbjct: 737 -------LDPRLIATSVAPPARPQMRFDPFTGEPYKFDPFTGEPIEPDGVRS 781


>emb|CBI21228.3| unnamed protein product [Vitis vinifera]
          Length = 533

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 44/112 (39%), Positives = 58/112 (51%), Gaps = 15/112 (13%)
 Frame = +2

Query: 32  GSNSSRFEATPPQP------TASYGRVPV-------KIEDRRLSPP-QVGLTSQSYARMA 169
           G+ ++R++     P      T SY   P+       K+E+   +P  +  ++S SY R  
Sbjct: 423 GTTAARYDGYETSPALSRYSTYSYTDYPLSRQLGFDKLEETSPTPLYRAAVSSSSYGRAE 482

Query: 170 PPATNLISDVRAVSGQQAAP-RPQMRFDPFTGEPYKFDPFTGEPIIHPGNNS 322
                   D R ++   A P RPQMRFDPFTGEPYKFDPFTGEPI   G  S
Sbjct: 483 -------LDPRLIATSVAPPARPQMRFDPFTGEPYKFDPFTGEPIEPDGVRS 527


>ref|XP_004962982.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
           nuclear-like isoform X2 [Setaria italica]
          Length = 600

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 32/52 (61%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
 Frame = +2

Query: 176 ATNLISDVRAVS-GQQAAPRPQMRFDPFTGEPYKFDPFTGEPIIHPGNNSTR 328
           +T+L SD R+ S  + +A R Q+RFDPFTGEPYKFDPFTGEP I P  N  R
Sbjct: 545 STDLSSDFRSRSPAEYSAERQQVRFDPFTGEPYKFDPFTGEP-IRPEQNQRR 595


>ref|XP_004962981.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
           nuclear-like isoform X1 [Setaria italica]
          Length = 602

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 32/52 (61%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
 Frame = +2

Query: 176 ATNLISDVRAVS-GQQAAPRPQMRFDPFTGEPYKFDPFTGEPIIHPGNNSTR 328
           +T+L SD R+ S  + +A R Q+RFDPFTGEPYKFDPFTGEP I P  N  R
Sbjct: 547 STDLSSDFRSRSPAEYSAERQQVRFDPFTGEPYKFDPFTGEP-IRPEQNQRR 597


>tpg|DAA47174.1| TPA: hypothetical protein ZEAMMB73_366443 [Zea mays]
          Length = 609

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/47 (65%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +2

Query: 191 SDVRAVS-GQQAAPRPQMRFDPFTGEPYKFDPFTGEPIIHPGNNSTR 328
           SD R+ S  + +A R QMRFDPFTGEPYKFDPFTGEP I P  N  R
Sbjct: 559 SDFRSRSPAEYSAQRQQMRFDPFTGEPYKFDPFTGEP-IRPDPNQRR 604


>gb|ACF86800.2| unknown [Zea mays] gi|414868619|tpg|DAA47176.1| TPA: hypothetical
           protein ZEAMMB73_366443 [Zea mays]
          Length = 438

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/47 (65%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +2

Query: 191 SDVRAVS-GQQAAPRPQMRFDPFTGEPYKFDPFTGEPIIHPGNNSTR 328
           SD R+ S  + +A R QMRFDPFTGEPYKFDPFTGEP I P  N  R
Sbjct: 388 SDFRSRSPAEYSAQRQQMRFDPFTGEPYKFDPFTGEP-IRPDPNQRR 433


>ref|NP_001130787.1| uncharacterized protein LOC100191891 [Zea mays]
           gi|194690114|gb|ACF79141.1| unknown [Zea mays]
           gi|414868618|tpg|DAA47175.1| TPA: hypothetical protein
           ZEAMMB73_366443 [Zea mays]
          Length = 605

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/47 (65%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +2

Query: 191 SDVRAVS-GQQAAPRPQMRFDPFTGEPYKFDPFTGEPIIHPGNNSTR 328
           SD R+ S  + +A R QMRFDPFTGEPYKFDPFTGEP I P  N  R
Sbjct: 555 SDFRSRSPAEYSAQRQQMRFDPFTGEPYKFDPFTGEP-IRPDPNQRR 600


>ref|XP_002442379.1| hypothetical protein SORBIDRAFT_08g019140 [Sorghum bicolor]
           gi|241943072|gb|EES16217.1| hypothetical protein
           SORBIDRAFT_08g019140 [Sorghum bicolor]
          Length = 441

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/74 (50%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
 Frame = +2

Query: 110 DRRLSPPQVGLTSQSYARMAPPATNLISDVRAVS-GQQAAPRPQMRFDPFTGEPYKFDPF 286
           +RR  PP  G     Y       T+L SD  + S  + +A R Q+RFDPFTGEPYKFDPF
Sbjct: 371 ERRFLPP-AGYNKAGYN------TDLGSDFCSRSPAEYSAERQQVRFDPFTGEPYKFDPF 423

Query: 287 TGEPIIHPGNNSTR 328
           TGEP I P  N  R
Sbjct: 424 TGEP-IRPDPNPRR 436


>ref|XP_006338380.1| PREDICTED: uncharacterized protein LOC102589697 isoform X1 [Solanum
           tuberosum] gi|565342496|ref|XP_006338381.1| PREDICTED:
           uncharacterized protein LOC102589697 isoform X2 [Solanum
           tuberosum]
          Length = 605

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
 Frame = +2

Query: 5   PIPRTIVEEGSNSSRFEATPPQPTASYGRVPVKIEDRRLSP-PQVGLTSQSYARMAPPAT 181
           P  ++++  G  + R E   P   A+       +   R+S   + G T Q  A  +P AT
Sbjct: 499 PNLQSLLSGGGTTRRMEEASPVLQAT------SLPSGRVSRMDEAGPTFQ--ASWSPSAT 550

Query: 182 ----NLISDVRAVSGQQAAPRPQMRFDPFTGEPYKFDPFTGEPIIHPGNNSTR 328
                L S +   S  Q   RP++RFDPFTGEPYKFDPFTGEPI+   ++  R
Sbjct: 551 ADRIGLHSRITPTSDHQQT-RPRIRFDPFTGEPYKFDPFTGEPIVPESSSHHR 602


>gb|EMT11921.1| Heterogeneous nuclear ribonucleoprotein A1 [Aegilops tauschii]
          Length = 729

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/43 (60%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
 Frame = +2

Query: 176 ATNLISDVRA-VSGQQAAPRPQMRFDPFTGEPYKFDPFTGEPI 301
           ATN+  + ++  S + +A   QMRFDP+TGEPYKFDPFTGEPI
Sbjct: 674 ATNIEPEFKSRSSAEYSAEHQQMRFDPYTGEPYKFDPFTGEPI 716


>ref|XP_004232173.1| PREDICTED: uncharacterized protein LOC101263365 [Solanum
           lycopersicum]
          Length = 610

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = +2

Query: 230 RPQMRFDPFTGEPYKFDPFTGEPIIHPGNNSTR 328
           RP++RFDPFTGEPYKFDPFTGEPI+   ++  R
Sbjct: 575 RPRIRFDPFTGEPYKFDPFTGEPIVPESSSHHR 607


>ref|NP_001177024.1| Os12g0577100 [Oryza sativa Japonica Group]
           gi|77556261|gb|ABA99057.1| RNA recognition motif family
           protein, expressed [Oryza sativa Japonica Group]
           gi|255670425|dbj|BAH95752.1| Os12g0577100 [Oryza sativa
           Japonica Group]
          Length = 414

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
 Frame = +2

Query: 179 TNLISDVRA-VSGQQAAPRPQMRFDPFTGEPYKFDPFTGEPIIHPGNNSTR 328
           TN++ +  +  S + +  R Q+RFDPFTGEPYKFDP+TGEP I P +N  R
Sbjct: 360 TNIVPEFSSRSSAEYSTARQQVRFDPFTGEPYKFDPYTGEP-IRPESNPRR 409


>gb|EEE53482.1| hypothetical protein OsJ_36631 [Oryza sativa Japonica Group]
          Length = 401

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
 Frame = +2

Query: 179 TNLISDVRA-VSGQQAAPRPQMRFDPFTGEPYKFDPFTGEPIIHPGNNSTR 328
           TN++ +  +  S + +  R Q+RFDPFTGEPYKFDP+TGEP I P +N  R
Sbjct: 347 TNIVPEFSSRSSAEYSTARQQVRFDPFTGEPYKFDPYTGEP-IRPESNPRR 396


>gb|EEC69559.1| hypothetical protein OsI_38857 [Oryza sativa Indica Group]
          Length = 378

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
 Frame = +2

Query: 179 TNLISDVRA-VSGQQAAPRPQMRFDPFTGEPYKFDPFTGEPIIHPGNNSTR 328
           TN++ +  +  S + +  R Q+RFDPFTGEPYKFDP+TGEP I P +N  R
Sbjct: 324 TNIVPEFSSRSSAEYSTARQQVRFDPFTGEPYKFDPYTGEP-IRPESNPRR 373


>gb|AFB33267.1| hypothetical protein 2_2799_03, partial [Pinus cembra]
           gi|376337393|gb|AFB33268.1| hypothetical protein
           2_2799_03, partial [Pinus cembra]
          Length = 85

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/63 (41%), Positives = 34/63 (53%)
 Frame = +2

Query: 125 PPQVGLTSQSYARMAPPATNLISDVRAVSGQQAAPRPQMRFDPFTGEPYKFDPFTGEPII 304
           PP++       +  AP +T                RP ++FDPFTG+P+KFDPFTGEPI 
Sbjct: 9   PPRLDNVHSLSSYRAPASTGFNLGSGLPEASVTERRPPIKFDPFTGQPFKFDPFTGEPIQ 68

Query: 305 HPG 313
           H G
Sbjct: 69  HSG 71


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