BLASTX nr result
ID: Mentha24_contig00015481
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00015481
(3731 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_004935358.1| ORF1 gene product [Actinidia virus B] gi|356... 1317 0.0
gb|ADE62745.1| replicase [Grapevine virus B] 1310 0.0
gb|AET36885.1| putative replicase, partial [Actinidia virus A] 1302 0.0
gb|ABU62819.1| replicase [Grapevine virus B] 1297 0.0
gb|AFV34758.1| replicase [Grapevine virus B] 1294 0.0
ref|NP_619654.1| putative replicase [Grapevine virus B] gi|10611... 1262 0.0
gb|ABH06996.2| replication-related protein [Grapevine virus A] 1062 0.0
gb|AAO84267.1| replicase [Grapevine virus A] 1058 0.0
gb|ABH06983.2| 194 kDa protein [Grapevine virus A] 1055 0.0
gb|AAO17778.1| RNA-dependent RNA polymerase [Grapevine virus A] 1054 0.0
gb|AGT17853.1| putative replicase [Grapevine virus A] 1053 0.0
ref|NP_619662.1| putative replicase [Grapevine virus A] gi|81937... 1053 0.0
gb|ABH07008.1| putative replicase [Grapevine virus A] 1052 0.0
gb|ABG37965.1| putative replicase [Grapevine virus A] 1052 0.0
gb|AFV73358.1| 195 kDa replicase [Grapevine virus A] 1050 0.0
gb|ABH06992.2| 194 kDa protein [Grapevine virus A] 1045 0.0
gb|ABL14358.1| 194 kDa protein [Grapevine virus A] 1045 0.0
gb|ABH06988.2| 194 kDa protein [Grapevine virus A] 1043 0.0
gb|ACA52189.1| 194 kDa protein [Grapevine virus A] 1042 0.0
ref|YP_006590065.1| replicase [Grapevine virus F] gi|401620150|g... 1024 0.0
>ref|YP_004935358.1| ORF1 gene product [Actinidia virus B] gi|356711544|gb|AET36890.1|
putative replicase [Actinidia virus B]
Length = 1707
Score = 1317 bits (3408), Expect = 0.0
Identities = 651/1055 (61%), Positives = 782/1055 (74%), Gaps = 1/1055 (0%)
Frame = -3
Query: 3726 EDFDHCLLQVYRENAGIGYHADDEPCYKNNAVVTVNLSGTCQFHISCKGEKVFELKDGDV 3547
EDFDHCL Q+Y + AGI YHADDE CYK +VVTVNL G F C E F L DGDV
Sbjct: 644 EDFDHCLCQIYEKGAGIPYHADDETCYKEPSVVTVNLFGEADFKTKCTNELSFRLTDGDV 703
Query: 3546 LTMPEGCQHDHKHKVDCTSAGRISLTFRNGITEPDMGSDAYTEYSEEEPDLESSMEILRK 3367
LTM +G Q +HKH V T GR+SLTFRN I D +EY E E + ++ +L K
Sbjct: 704 LTMGKGFQSNHKHSVQNTGPGRVSLTFRNSIISNQADEDDLSEYEETEAGFDETLVVLEK 763
Query: 3366 NGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKELDIPLYL 3187
N KNLCC+DRI+EHMGV RE+C SII+SK PRAIEE K+GGMS+ T + ++K+LD+ Y+
Sbjct: 764 NVKNLCCLDRIAEHMGVKREVCASIIHSKMPRAIEEFKEGGMSISTFIHVVKQLDLACYI 823
Query: 3186 QNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFEYNAKRAK 3007
QN RG I+ PG F+E+ A H+ +LGP T + AL+FNPDVS E RA
Sbjct: 824 QNERGNIQVPGKFRELKVSATGEHMSAYLGPTATSTLATALDFNPDVSRLSIEVTQSRAI 883
Query: 3006 LLIESFQEGFTGVCLNKFQKGKGALGDPEGVGQVQVYTLFGFAGSGKSYYPQTLLNGGAY 2827
L+ESF+EGFTGV LNK+QK LG + VY LFGFAGSGKSYYPQTLL
Sbjct: 884 HLLESFREGFTGVNLNKYQKRP--LGTDIDNTLIDVYGLFGFAGSGKSYYPQTLLRCCNM 941
Query: 2826 NDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKRFKNIVVDEIGLLPHGYLDMLCG 2647
DTLVIVPRKAL DW KV V TFE AF G K ++NI++DE+GLLP GY+D++
Sbjct: 942 KDTLVIVPRKALKADWSEKVKDGAIVRTFESAFNGRKGYENIIIDEVGLLPPGYIDLVHA 1001
Query: 2646 AFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHRLPSNQTIFEI 2467
FQ++T+L+LGDPLQ YYNK D LFL PI ESVF +G+K+YL KTHRLPSNQ +F++
Sbjct: 1002 NFQYDTMLLLGDPLQSEYYNKGDSLFLEPISESVFDRLMGKKNYLYKTHRLPSNQKLFDV 1061
Query: 2466 PSHGEKSDKYITMNEKVGN-DQKITASRKRKEIEGSRANTIGECQGLSLQRVNLMLDEDW 2290
PS GE+S+ Y+ E N D ITASR KE G + +TIGE QGLS++RV L++D DW
Sbjct: 1062 PSKGERSENYLKGAEGDANYDLIITASRAAKEKRGQKGSTIGESQGLSVRRVKLVIDRDW 1121
Query: 2289 ALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVNKNSLVNILST 2110
L++D++ MVALTRAR ++V VD+ +K L HAKSS+L+ FL GQ + + ++ ++ T
Sbjct: 1122 GLLNDKAVMVALTRARNTLSVEVDKSMKEHLKVHAKSSILKMFLRGQMIKRELIMEMMGT 1181
Query: 2109 HLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXETSVQTPQRTHL 1930
DVEL+ +E R D+DDME++L+GDPYLK + S+ PQ+THL
Sbjct: 1182 DNGDVELIEKETRFADSDDMEDKLSGDPYLKGLLRLYDDVEMEEEEVPDVSLPEPQKTHL 1241
Query: 1929 WLSDGSNNVSISELKAKEHREAYTEAGITDQINEEGYKNSTADPMTHKALYLHHKNADVA 1750
+S N ++ S L+A+EHREA T AG T+QI+E GYK +PMTHKALYLHH+N+DVA
Sbjct: 1242 PISTKENELAPSLLRAREHREARTPAGTTEQIDEMGYKMEPENPMTHKALYLHHRNSDVA 1301
Query: 1749 TFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPDTLPDLSRVETEFTK 1570
TF LSV+KRLRF D EKN R++NK GFG QLFK++KETY L QPD LPDL R+E EF +
Sbjct: 1302 TFFLSVKKRLRFMDREKNHRRFNKVKGFGKQLFKVLKETYNLRQPDKLPDLDRIEAEFAR 1361
Query: 1569 KRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLC 1390
KRL KS+ LIEKHSYRSDPDWPS+YL+IFLKQQVCTKMEKRGVDAKAGQTIACF HAVLC
Sbjct: 1362 KRLNKSKNLIEKHSYRSDPDWPSHYLKIFLKQQVCTKMEKRGVDAKAGQTIACFCHAVLC 1421
Query: 1389 KFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGTDSDYEAFDRSQDEK 1210
KFG LRRTEKALRAQL DNV+IYSQ NYTDLD W + +V M+GTDSDYEAFDRSQDE+
Sbjct: 1422 KFGPLLRRTEKALRAQLGDNVLIYSQLNYTDLDKWCKNFVPSMLGTDSDYEAFDRSQDER 1481
Query: 1209 ILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFGTFFFNTVCNMAFTC 1030
IL FE+EVLKFFLWPEE+INEY ELKLMMG SMG LA+MRFSGEFGTFFFNT+CNMAFTC
Sbjct: 1482 ILDFEMEVLKFFLWPEEVINEYKELKLMMGSSMGSLAVMRFSGEFGTFFFNTICNMAFTC 1541
Query: 1029 LRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVSESPLFCGWRMTPYG 850
LRY + KDTPICYAGDDMY+PG L I +E L +L LKAKV VS PLFCGWRM+PYG
Sbjct: 1542 LRYKINKDTPICYAGDDMYAPGHLIISKEHEGTLDQLSLKAKVRVSTEPLFCGWRMSPYG 1601
Query: 849 IVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVNIDIDAQQELVRRIV 670
IVKDPNLLLDRWKIA+ G L C NY+LEA YGYRLGE+L+D+NIDIDAQQELVR I+
Sbjct: 1602 IVKDPNLLLDRWKIAKRGGNLDQCMVNYSLEACYGYRLGEYLFDINIDIDAQQELVREII 1661
Query: 669 RVKDQLPKGIGRLYSSDPNECHSDGEELTIRVSAE 565
++K +LPKGI +L+SSDP EC SDGEEL RV E
Sbjct: 1662 KIKHKLPKGIRKLFSSDPTECGSDGEELEFRVRNE 1696
>gb|ADE62745.1| replicase [Grapevine virus B]
Length = 1709
Score = 1310 bits (3389), Expect = 0.0
Identities = 641/1055 (60%), Positives = 797/1055 (75%), Gaps = 1/1055 (0%)
Frame = -3
Query: 3726 EDFDHCLLQVYRENAGIGYHADDEPCYKNNAVVTVNLSGTCQFHISCKGEKVFELKDGDV 3547
ED+DHCL QVY EN GI YHADDEPCY + VVTVNL G F++ C E L+DGDV
Sbjct: 647 EDYDHCLAQVYEENKGINYHADDEPCYTDPEVVTVNLKGAANFYLKCSTECSLTLEDGDV 706
Query: 3546 LTMPEGCQHDHKHKVDCTSAGRISLTFRNGITEPDMGSDAYTEYSEEEPDLESSMEILRK 3367
L MP+G Q+ HKH V ++GR+SLTFRNGI EPD GSD +EY E P+LE S++ L K
Sbjct: 707 LVMPKGFQNTHKHAVTSLTSGRVSLTFRNGINEPDEGSDKMSEYEENSPELEESLDALEK 766
Query: 3366 NGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKELDIPLYL 3187
N K+LC + +++HM V IC S++ +K PRAIEE+K GGM++GT + +LK L++ Y+
Sbjct: 767 NRKSLCALQILADHMRVDLAICTSMVFAKDPRAIEEVKRGGMTLGTFICVLKSLNLAAYI 826
Query: 3186 QNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFEYNAKRAK 3007
++ RGC+ G++KE+SC A D+H+ + GP+ E +F+ AL+ NPD+ +E +RAK
Sbjct: 827 ESERGCLVVNGTYKELSCYAEDDHISEWSGPRKETSFANALSMNPDIRVVKYEVCEQRAK 886
Query: 3006 LLIESFQEGFTGVCLNKFQKGKGALGDPEGVGQVQVYTLFGFAGSGKSYYPQTLLNGGAY 2827
L SFQEGFTGVCLNKFQK K + G + V+ GFAGSGKS+YPQ +L +Y
Sbjct: 887 KLASSFQEGFTGVCLNKFQKQKSSFNLVNGSELIDVHLTLGFAGSGKSFYPQCVLKNSSY 946
Query: 2826 NDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKR-FKNIVVDEIGLLPHGYLDMLC 2650
++ LVIVPRKALC DW NKVH DV VVTFE AF+ +K+ + IV+DEIGLLP GY+DM+
Sbjct: 947 SNALVIVPRKALCSDWINKVHPDVKVVTFESAFRQQKKGYGLIVIDEIGLLPPGYIDMVH 1006
Query: 2649 GAFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHRLPSNQTIFE 2470
G F +++LLVLGDPLQC Y++K+D FL ES+FK F G +YL K+HRLP NQ +FE
Sbjct: 1007 GYFCYDSLLVLGDPLQCEYHSKSDHFFLGQ-EESIFKRFKGHCNYLYKSHRLPKNQRLFE 1065
Query: 2469 IPSHGEKSDKYITMNEKVGNDQKITASRKRKEIEGSRANTIGECQGLSLQRVNLMLDEDW 2290
I G + D +T N+ G D + AS++RKE E +T+GE QGLS RVN++LD+DW
Sbjct: 1066 IECDGAEGDG-LTFNKARGKDLTLCASQRRKESE-KNVSTVGESQGLSANRVNILLDKDW 1123
Query: 2289 ALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVNKNSLVNILST 2110
+L+++E+ +VA TRAR++INV + +L + L + AKS++LR L G+RV ++ ++N++
Sbjct: 1124 SLVNEETVIVAFTRARKEINVIGNSRLISNLKRSAKSTILRKILGGERVPESLILNLIRR 1183
Query: 2109 HLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXETSVQTPQRTHL 1930
L + +LV +EM LG +DDMEE+L GDPYLK E + PQRTHL
Sbjct: 1184 KLPECDLVKKEMLLGASDDMEEKLGGDPYLKGLLCLIDEIEEEEVEIPEPELLEPQRTHL 1243
Query: 1929 WLSDGSNNVSISELKAKEHREAYTEAGITDQINEEGYKNSTADPMTHKALYLHHKNADVA 1750
LS G N + +S+L+AKE+REA TEAG TDQI+E GYK +PM HKALYL+H+N+DVA
Sbjct: 1244 PLSVGENELCVSDLRAKEYREASTEAGRTDQIDEFGYKGEPENPMNHKALYLYHQNSDVA 1303
Query: 1749 TFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPDTLPDLSRVETEFTK 1570
TF LSVRKRLRFRD EKNRRK+NKC GFGAQ+F +MK+ Y L QPD LP L R E EF K
Sbjct: 1304 TFFLSVRKRLRFRDAEKNRRKFNKCRGFGAQMFGVMKQVYNLKQPDHLPSLERAEQEFMK 1363
Query: 1569 KRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLC 1390
KR+AKS KLIEKHSYRS+PDWPSNYL+IFLKQQ CTKMEKR VDAKAGQTIACF HAVLC
Sbjct: 1364 KRIAKSSKLIEKHSYRSEPDWPSNYLKIFLKQQRCTKMEKRKVDAKAGQTIACFCHAVLC 1423
Query: 1389 KFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGTDSDYEAFDRSQDEK 1210
+FG LR+TEKALR QL NVMIYSQKNYTDLD W + +V + GTDSDY AFDRSQDEK
Sbjct: 1424 RFGPLLRQTEKALRDQLGPNVMIYSQKNYTDLDKWCKNFVRTLDGTDSDYGAFDRSQDEK 1483
Query: 1209 ILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFGTFFFNTVCNMAFTC 1030
IL FEV VL+FFLWPEE+I EYV LKLMMGCSMG LA+MRFSGEFGTFFFNT+CNM FTC
Sbjct: 1484 ILDFEVNVLRFFLWPEEMIEEYVTLKLMMGCSMGGLAVMRFSGEFGTFFFNTICNMGFTC 1543
Query: 1029 LRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVSESPLFCGWRMTPYG 850
L+YS+ DTPICYAGDDMY+PGVL K+ ++H+L+ELQLKAKVN + SPLFCGWRM+PYG
Sbjct: 1544 LKYSIRSDTPICYAGDDMYAPGVLVTKSEFKHILEELQLKAKVNYTRSPLFCGWRMSPYG 1603
Query: 849 IVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVNIDIDAQQELVRRIV 670
IVKDPNLLLDRWKIAE DG LK+C NYALEAIYGYRLGEHL+D+NIDIDAQQ+L+RRIV
Sbjct: 1604 IVKDPNLLLDRWKIAERDGSLKNCMVNYALEAIYGYRLGEHLFDLNIDIDAQQDLIRRIV 1663
Query: 669 RVKDQLPKGIGRLYSSDPNECHSDGEELTIRVSAE 565
+K QLPK + R YS + EC+SDGEE ++V E
Sbjct: 1664 LIKHQLPKSLQRFYSDEERECYSDGEEFNLKVRNE 1698
>gb|AET36885.1| putative replicase, partial [Actinidia virus A]
Length = 1714
Score = 1302 bits (3370), Expect = 0.0
Identities = 648/1056 (61%), Positives = 787/1056 (74%), Gaps = 1/1056 (0%)
Frame = -3
Query: 3729 DEDFDHCLLQVYRENAGIGYHADDEPCYKNNAVVTVNLSGTCQFHISCKGEKVFELKDGD 3550
DE +DHCL QVY +GIGYHADDE CY + +VVTVNL G F C E F+L GD
Sbjct: 651 DESYDHCLAQVYEAGSGIGYHADDEDCYNDPSVVTVNLKGEAVFKTKCTNELTFDLGAGD 710
Query: 3549 VLTMPEGCQHDHKHKVDCTSAGRISLTFRNGITEPDMGSDAYTEYSEEEPDLESSMEILR 3370
VL M +G Q HKH V + GR+SLTFRN I + D SD +EY E E + ++EIL
Sbjct: 711 VLIMHKGFQKTHKHSVVSKTPGRVSLTFRNSIKQADSDSDHLSEYEETESPFDETLEILG 770
Query: 3369 KNGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKELDIPLY 3190
KN K+LCC+DRI+EHMGV+RE+C S I++K PRA+EE K+GGMS+ TLL +LK+LD+ Y
Sbjct: 771 KNIKSLCCLDRIAEHMGVSREVCASHIHAKMPRAVEEFKEGGMSISTLLQVLKQLDVAGY 830
Query: 3189 LQNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFEYNAKRA 3010
+ + RG +R G FKE+S A+D+H+E F G K + TF A++FNPDVS +F + ++A
Sbjct: 831 ICSERGEVRTLGKFKEISLFASDDHIEPFPGEKGDCTFESAMDFNPDVSRVHFVVDQEKA 890
Query: 3009 KLLIESFQEGFTGVCLNKFQKGKGALGDPEGVGQVQVYTLFGFAGSGKSYYPQTLLNGGA 2830
L ESF+EGFTG+ LNKF+ G P+ + +V+TL GFAGSGKSYYPQTLL GGA
Sbjct: 891 NHLSESFREGFTGISLNKFRGGVPRT-TPQKFSR-EVHTLMGFAGSGKSYYPQTLLKGGA 948
Query: 2829 YNDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKRFKNIVVDEIGLLPHGYLDMLC 2650
Y +LVI PRKAL DW++K+ K V TFE AFK +KRF N+++DEIGLLP GY+D+
Sbjct: 949 YKSSLVITPRKALASDWESKIAKGADVATFEVAFKVKKRFDNLIIDEIGLLPPGYIDLAI 1008
Query: 2649 GAFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHRLPSNQTIFE 2470
F E +L+LGDPLQ Y+NK D+LFLAPI ES+F G+ +YL KTHRLP NQ I E
Sbjct: 1009 LHFNPECVLLLGDPLQAEYHNKQDELFLAPITESIFSRLQGKVNYLFKTHRLPRNQEIIE 1068
Query: 2469 IPSHGEKSDKYITMNEKVGN-DQKITASRKRKEIEGSRANTIGECQGLSLQRVNLMLDED 2293
+PS GE S Y+ +K D + ASR K+ ++TIGE QGLS V L +D D
Sbjct: 1069 VPSKGELSPDYVGGAQKQRTADLILHASRSAKDKGAQGSSTIGEAQGLSANAVRLEMDLD 1128
Query: 2292 WALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVNKNSLVNILS 2113
W LISD+ MVALTRAR+ + V + +L+ L+ A+S L++FL G+R+ K L+ L+
Sbjct: 1129 WGLISDQHFMVALTRARKSLQVNIKSELRKHLINTARSPFLKNFLQGKRITKAMLLAALN 1188
Query: 2112 THLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXETSVQTPQRTH 1933
DV+ + +EMR D+DDME++LAGDPYLK E + PQ+TH
Sbjct: 1189 EKGMDVDFIEKEMRFADSDDMEDKLAGDPYLKGLLKLYQDVEMEEVEIIEPHLGEPQKTH 1248
Query: 1932 LWLSDGSNNVSISELKAKEHREAYTEAGITDQINEEGYKNSTADPMTHKALYLHHKNADV 1753
L +S N +S+S LKAKEHRE T AGIT+QI++EGYK TADPMTHKALYLHHKN+DV
Sbjct: 1249 LPISAHENEISVSLLKAKEHREVLTSAGITEQIDDEGYKGDTADPMTHKALYLHHKNSDV 1308
Query: 1752 ATFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPDTLPDLSRVETEFT 1573
ATF LSV+KRLRFRD E+N RK+NKC GFGAQ+F I+K+TY+L QP LPDL RVETEF
Sbjct: 1309 ATFFLSVKKRLRFRDQERNTRKFNKCRGFGAQMFNILKKTYKLQQPLQLPDLDRVETEFV 1368
Query: 1572 KKRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVL 1393
KKRL KS+ LIEKHSYRSDPDWPSNYL++FLKQQ CTKMEKRGVDAKAGQTIACF HAVL
Sbjct: 1369 KKRLNKSKNLIEKHSYRSDPDWPSNYLKVFLKQQTCTKMEKRGVDAKAGQTIACFCHAVL 1428
Query: 1392 CKFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGTDSDYEAFDRSQDE 1213
C+FGVQLRRTEKALRAQL NV+IYSQ NYTDLD W + +V MIGTDSDYEAFDRSQDE
Sbjct: 1429 CRFGVQLRRTEKALRAQLGPNVLIYSQLNYTDLDKWCKNFVPSMIGTDSDYEAFDRSQDE 1488
Query: 1212 KILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFGTFFFNTVCNMAFT 1033
KIL FE+EVLKFFLWPEELI EY LKLMMGCSMG LA+MRFSGEFGTFFFNT+CNMAFT
Sbjct: 1489 KILDFELEVLKFFLWPEELIEEYKCLKLMMGCSMGGLAVMRFSGEFGTFFFNTICNMAFT 1548
Query: 1032 CLRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVSESPLFCGWRMTPY 853
CLRY++ + TP+CYAGDDMY+PG L + +YEH+L +L LKAKV VS +PLFCGWRM+PY
Sbjct: 1549 CLRYNINESTPVCYAGDDMYAPGALTLNKSYEHILDQLSLKAKVRVSTTPLFCGWRMSPY 1608
Query: 852 GIVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVNIDIDAQQELVRRI 673
GIVKDPNLLLDRWKIA +G L +C NYA+EA YGYRLGE+L+DVNIDIDAQQELVR I
Sbjct: 1609 GIVKDPNLLLDRWKIAHRNGNLPNCMVNYAIEACYGYRLGEYLFDVNIDIDAQQELVRAI 1668
Query: 672 VRVKDQLPKGIGRLYSSDPNECHSDGEELTIRVSAE 565
V+VK LPK IG+L+S DP EC SD EE ++V E
Sbjct: 1669 VKVKHLLPKAIGKLFSKDPTECFSDEEEAGLQVRCE 1704
>gb|ABU62819.1| replicase [Grapevine virus B]
Length = 1709
Score = 1297 bits (3357), Expect = 0.0
Identities = 639/1055 (60%), Positives = 793/1055 (75%), Gaps = 1/1055 (0%)
Frame = -3
Query: 3726 EDFDHCLLQVYRENAGIGYHADDEPCYKNNAVVTVNLSGTCQFHISCKGEKVFELKDGDV 3547
ED+DHCL Q+Y EN GI +HADDE CY + VVTVNL GT +FH+ C E L+DGDV
Sbjct: 647 EDYDHCLAQMYEENKGINHHADDELCYTDPEVVTVNLKGTAKFHLKCGEECSLTLQDGDV 706
Query: 3546 LTMPEGCQHDHKHKVDCTSAGRISLTFRNGITEPDMGSDAYTEYSEEEPDLESSMEILRK 3367
L MP+G Q HKH V S GR+SLTFRNGI PD GSD +EY E P+LE S++ L K
Sbjct: 707 LVMPKGFQTTHKHAVTSLSEGRVSLTFRNGINAPDEGSDKMSEYEENSPELEESLDALEK 766
Query: 3366 NGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKELDIPLYL 3187
N K+LC + +++HM V IC S++ +K PRAIEE+K GGM++GT + +LK L++ Y+
Sbjct: 767 NRKSLCALQILADHMRVDLAICTSMVFAKDPRAIEEVKRGGMTLGTFICVLKSLNLAAYI 826
Query: 3186 QNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFEYNAKRAK 3007
++ RGC+ GS+KE+SC A D+H+ + GP+ E +FS AL+ NPD+ +E +RAK
Sbjct: 827 ESERGCLVVNGSYKELSCYAEDDHISEWSGPRKETSFSNALSMNPDIRVVKYEVCEQRAK 886
Query: 3006 LLIESFQEGFTGVCLNKFQKGKGALGDPEGVGQVQVYTLFGFAGSGKSYYPQTLLNGGAY 2827
L+ SFQEGFTGVCLNKFQK K + G + ++ GFAGSGKS+YPQ +L +Y
Sbjct: 887 KLVNSFQEGFTGVCLNKFQKQKSSFNLVNGKELIDIHLTLGFAGSGKSFYPQCVLKNSSY 946
Query: 2826 NDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKR-FKNIVVDEIGLLPHGYLDMLC 2650
++TLVIVPRKALC DW NKVH DV VVT+E AF+ +K+ + IV+DEIGLLP GY+DM+
Sbjct: 947 SNTLVIVPRKALCSDWINKVHPDVKVVTYECAFRQQKKGYGLIVIDEIGLLPPGYIDMVH 1006
Query: 2649 GAFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHRLPSNQTIFE 2470
G F +++LLVLGDPLQC Y++K+D FL ES+FK F G +YL K+HRLP NQ +FE
Sbjct: 1007 GYFCYDSLLVLGDPLQCEYHSKSDHFFLGQ-EESIFKKFKGHCNYLYKSHRLPKNQRLFE 1065
Query: 2469 IPSHGEKSDKYITMNEKVGNDQKITASRKRKEIEGSRANTIGECQGLSLQRVNLMLDEDW 2290
I G + +T N+ G D + AS++RKE E +T+GE QGLS RVN++LD+DW
Sbjct: 1066 IECDGAEGGG-LTFNKPRGKDLTLCASQRRKESERD-VSTVGESQGLSANRVNILLDKDW 1123
Query: 2289 ALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVNKNSLVNILST 2110
+++E+ +VA TRAR++IN+ L + L + AKS +LR L G+RV+++ +++++
Sbjct: 1124 GRVNEETVVVAFTRARKEINLIGYSSLVSNLKRSAKSMILRKILSGERVSESLILSLIRR 1183
Query: 2109 HLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXETSVQTPQRTHL 1930
L + +LV +EM LG +D+MEE+L GDPYLK E + PQRTHL
Sbjct: 1184 KLPECDLVKKEMLLGASDEMEEKLGGDPYLKGLLCLIDEIEEEEVEMPEPELLEPQRTHL 1243
Query: 1929 WLSDGSNNVSISELKAKEHREAYTEAGITDQINEEGYKNSTADPMTHKALYLHHKNADVA 1750
LS G N + IS+L+AKEHREA TEAG TDQI+E GYK +PM HKALYL+H+N+DVA
Sbjct: 1244 PLSVGENELCISDLRAKEHREASTEAGRTDQIDEFGYKGEPENPMNHKALYLYHQNSDVA 1303
Query: 1749 TFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPDTLPDLSRVETEFTK 1570
TF LSVRKRLRFRD EKNRRK+NKC GFGAQ+F +MK+ Y+L QPD LP L R E +F K
Sbjct: 1304 TFFLSVRKRLRFRDAEKNRRKFNKCRGFGAQMFGVMKQIYKLKQPDHLPSLERAEQDFMK 1363
Query: 1569 KRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLC 1390
KR+AKS KLIEKHSYRS+PDWPSNYL+IFLKQQ CTKMEKR VDAKAGQTIACF HAVLC
Sbjct: 1364 KRIAKSSKLIEKHSYRSEPDWPSNYLKIFLKQQRCTKMEKRKVDAKAGQTIACFCHAVLC 1423
Query: 1389 KFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGTDSDYEAFDRSQDEK 1210
+FG LR+TEKALR QL NVMIYSQKNYTDLD W + +V + GTDSDYEAFDRSQDEK
Sbjct: 1424 RFGPLLRQTEKALRDQLGPNVMIYSQKNYTDLDKWCKNFVRTLDGTDSDYEAFDRSQDEK 1483
Query: 1209 ILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFGTFFFNTVCNMAFTC 1030
IL FEV VL+FFLWPEE+I EYV LKLMMGCSMG LA+MRFSGEFGTFFFNT+CNM FTC
Sbjct: 1484 ILDFEVNVLRFFLWPEEMIEEYVTLKLMMGCSMGGLAVMRFSGEFGTFFFNTICNMGFTC 1543
Query: 1029 LRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVSESPLFCGWRMTPYG 850
L+YS+ DTPICYAGDDMY+PGVL K+ Y+HVL+ELQLKAKVN + SPLFCGWRM+PYG
Sbjct: 1544 LKYSIRSDTPICYAGDDMYAPGVLVTKSEYKHVLEELQLKAKVNYTRSPLFCGWRMSPYG 1603
Query: 849 IVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVNIDIDAQQELVRRIV 670
IVKDPNLLLDRWKIAE DG LK+C NYALEAIYGYRLGEHL+D+NIDIDAQQ+LVRRIV
Sbjct: 1604 IVKDPNLLLDRWKIAERDGSLKNCMVNYALEAIYGYRLGEHLFDLNIDIDAQQDLVRRIV 1663
Query: 669 RVKDQLPKGIGRLYSSDPNECHSDGEELTIRVSAE 565
+K LP+ + R YS + EC+SDGEE ++V E
Sbjct: 1664 LIKHLLPQSLQRFYSDEERECYSDGEEFNLKVRNE 1698
>gb|AFV34758.1| replicase [Grapevine virus B]
Length = 1709
Score = 1294 bits (3348), Expect = 0.0
Identities = 634/1055 (60%), Positives = 793/1055 (75%), Gaps = 1/1055 (0%)
Frame = -3
Query: 3726 EDFDHCLLQVYRENAGIGYHADDEPCYKNNAVVTVNLSGTCQFHISCKGEKVFELKDGDV 3547
E++DHCL QVY EN GI YHADDEPCY + VVTVNL G +F++ C E L+DGDV
Sbjct: 647 EEYDHCLAQVYEENKGINYHADDEPCYTDPEVVTVNLKGAAKFYLKCSTECSLSLEDGDV 706
Query: 3546 LTMPEGCQHDHKHKVDCTSAGRISLTFRNGITEPDMGSDAYTEYSEEEPDLESSMEILRK 3367
L MP+G Q HKH V + GR+SLTFRNGI PD GSD +EY E P+LE S++ L K
Sbjct: 707 LVMPKGFQATHKHAVTSLTEGRVSLTFRNGINAPDEGSDKMSEYEENSPELEESLDALEK 766
Query: 3366 NGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKELDIPLYL 3187
N K+LC + +++HM V IC S++ +K PRAIEE+K GGM++GT + +LK L++ Y+
Sbjct: 767 NRKSLCALQILADHMRVDLAICTSMVFAKDPRAIEEVKRGGMTLGTFICVLKSLNLAAYI 826
Query: 3186 QNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFEYNAKRAK 3007
++ RGC+ G++KE+SC A D+H+ + GP+ + +FS AL+ NPD+ +E +RAK
Sbjct: 827 ESERGCLVVNGTYKELSCYAEDDHIAAWTGPRKDTSFSNALSMNPDIRIVKYEVCEQRAK 886
Query: 3006 LLIESFQEGFTGVCLNKFQKGKGALGDPEGVGQVQVYTLFGFAGSGKSYYPQTLLNGGAY 2827
L SFQEGFTGVCLNKFQK K + G + V+ GFAGSGKS+YPQ +L +Y
Sbjct: 887 RLASSFQEGFTGVCLNKFQKQKSSFNLVNGKELIDVHLTLGFAGSGKSFYPQCVLKNSSY 946
Query: 2826 NDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKR-FKNIVVDEIGLLPHGYLDMLC 2650
+ LVIVPRKALC DW NKVH DV VVTFE AF+ +K+ + IV+DEIGLLP GY+DM+
Sbjct: 947 ANALVIVPRKALCSDWTNKVHPDVKVVTFESAFRQQKKGYGLIVIDEIGLLPPGYIDMVH 1006
Query: 2649 GAFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHRLPSNQTIFE 2470
G F +++LLVLGDPLQC Y++K+D FL ES+FK+F G +YL K+HRLP NQ +FE
Sbjct: 1007 GYFCYDSLLVLGDPLQCEYHSKSDHFFLGQ-EESIFKSFKGHCNYLYKSHRLPKNQRLFE 1065
Query: 2469 IPSHGEKSDKYITMNEKVGNDQKITASRKRKEIEGSRANTIGECQGLSLQRVNLMLDEDW 2290
I G + + +T N+ G D + AS++RKE E +T+GE QGLS RVN++LD DW
Sbjct: 1066 IECDGAEGEG-LTFNKPRGKDLTLCASQRRKESE-KNVSTVGESQGLSANRVNILLDRDW 1123
Query: 2289 ALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVNKNSLVNILST 2110
+L+++E+ +VA TRAR++INV D L + L + AKS++LR L G+RV ++ +++++
Sbjct: 1124 SLVNEETVVVAFTRARKEINVIGDTTLISNLKRSAKSTILRKILSGERVTESLILSLIRR 1183
Query: 2109 HLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXETSVQTPQRTHL 1930
L + +LV +EM LG +D+MEE+L+GDPYLK E + PQRTHL
Sbjct: 1184 KLPECDLVKKEMLLGASDEMEEKLSGDPYLKGLLCLIDEIEEEEVEIPEPELLEPQRTHL 1243
Query: 1929 WLSDGSNNVSISELKAKEHREAYTEAGITDQINEEGYKNSTADPMTHKALYLHHKNADVA 1750
LS G N + IS+L+AKE+REA TEAG TDQI++ GYK +PM HKALYL+H+N+DVA
Sbjct: 1244 PLSVGENELCISDLRAKEYREASTEAGRTDQIDDLGYKGEPENPMNHKALYLYHQNSDVA 1303
Query: 1749 TFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPDTLPDLSRVETEFTK 1570
TF LSVRKRLRFRD EKNRRK+NKC GFGAQ+F +MK+ Y L QPD LP L + E +F K
Sbjct: 1304 TFFLSVRKRLRFRDAEKNRRKFNKCRGFGAQMFGVMKQIYNLKQPDHLPLLEKAEQDFMK 1363
Query: 1569 KRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLC 1390
KR+AKS KLIEKHSYRS+PDWPSNYL++FLKQQ CTKMEKR VDAKAGQTIACF HAVLC
Sbjct: 1364 KRIAKSSKLIEKHSYRSEPDWPSNYLKVFLKQQRCTKMEKRKVDAKAGQTIACFCHAVLC 1423
Query: 1389 KFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGTDSDYEAFDRSQDEK 1210
+FG LR+TE+ALR QL NVMIYSQKNYTDLD W + +V + GTDSDYEAFDRSQDEK
Sbjct: 1424 RFGPLLRQTERALRDQLGPNVMIYSQKNYTDLDRWCKNFVRTLDGTDSDYEAFDRSQDEK 1483
Query: 1209 ILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFGTFFFNTVCNMAFTC 1030
IL FEV VL+FFLWPEE+I EYV LKLMMGCSMG LA+MRFSGEFGTFFFNTVCNM FTC
Sbjct: 1484 ILDFEVNVLRFFLWPEEMIEEYVTLKLMMGCSMGGLAVMRFSGEFGTFFFNTVCNMGFTC 1543
Query: 1029 LRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVSESPLFCGWRMTPYG 850
L+YS+ DTPICYAGDDMY+PGVL K+ ++H+L ELQLKAKVN + SPLFCGWRM+PYG
Sbjct: 1544 LKYSIRADTPICYAGDDMYAPGVLVTKSEFKHILAELQLKAKVNYTRSPLFCGWRMSPYG 1603
Query: 849 IVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVNIDIDAQQELVRRIV 670
IVKDPNLLLDRWKIAE DG LK+C NYALEAIYGYRLGEHL+D+NIDIDAQQ+LVRRIV
Sbjct: 1604 IVKDPNLLLDRWKIAERDGSLKNCMVNYALEAIYGYRLGEHLFDLNIDIDAQQDLVRRIV 1663
Query: 669 RVKDQLPKGIGRLYSSDPNECHSDGEELTIRVSAE 565
+K LP+ + R YS + EC+SDGEE ++V E
Sbjct: 1664 LIKHLLPQSLQRFYSDEERECYSDGEEFNLKVKNE 1698
>ref|NP_619654.1| putative replicase [Grapevine virus B] gi|1061119|emb|CAA53196.1|
putative replicase [Grapevine virus B]
Length = 1707
Score = 1262 bits (3266), Expect = 0.0
Identities = 627/1055 (59%), Positives = 776/1055 (73%), Gaps = 1/1055 (0%)
Frame = -3
Query: 3726 EDFDHCLLQVYRENAGIGYHADDEPCYKNNAVVTVNLSGTCQFHISCKGEKVFELKDGDV 3547
EDFDHCL Q+Y E+ GI ++ADDEPCY + VVTVNL+G FH+ C E V L DGDV
Sbjct: 646 EDFDHCLAQIYEEDKGINFNADDEPCYTDPEVVTVNLNGNANFHLKCGSESVVPLSDGDV 705
Query: 3546 LTMPEGCQHDHKHKVDCTSAGRISLTFRNGITEPDMGSDAYTEYSEEEPDLESSMEILRK 3367
L MP+G Q HKH V TSAGRISLTFRNGI PD GSD +EY EE + R+
Sbjct: 706 LIMPKGFQKTHKHAVTGTSAGRISLTFRNGINAPDEGSDKMSEY-EETHRIGGKPGCPRE 764
Query: 3366 NGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKELDIPLYL 3187
K + +++HM V IC S++ +K PRA EE+K GGM++GT + +LK L++ Y+
Sbjct: 765 EQKESVSLQILADHMRVDLAICTSMVFAKDPRAREEVKRGGMTLGTFICVLKSLNLGAYI 824
Query: 3186 QNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFEYNAKRAK 3007
++ RGC+ G++KE+SC A D+H+ + GP+ E TFS AL+ NPD+ +E +RAK
Sbjct: 825 ESERGCLYVNGAYKELSCYAEDDHISEWSGPRKETTFSNALSMNPDIRVVKYEVCEQRAK 884
Query: 3006 LLIESFQEGFTGVCLNKFQKGKGALGDPEGVGQVQVYTLFGFAGSGKSYYPQTLLNGGAY 2827
L++SFQEGFTGVCLNKFQK K + G + V+ GFAGSGKS+YPQ +L Y
Sbjct: 885 KLVDSFQEGFTGVCLNKFQKQKSSFNLVNGKELIDVHLTLGFAGSGKSFYPQCVLKNSHY 944
Query: 2826 NDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKR-FKNIVVDEIGLLPHGYLDMLC 2650
++LVIVPRKALC DW NKVH DV VVTFE AF+ +K+ + IV+DEIGLLP GY+DM+
Sbjct: 945 ANSLVIVPRKALCSDWSNKVHPDVKVVTFESAFRQQKKGYGLIVIDEIGLLPPGYIDMVH 1004
Query: 2649 GAFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHRLPSNQTIFE 2470
G F +++LLVLGDPLQC Y++K D FL ESVFK F G +YL K+HRLP NQ +FE
Sbjct: 1005 GYFCYDSLLVLGDPLQCEYHSKADHFFLGQ-EESVFKKFKGHCNYLYKSHRLPRNQKLFE 1063
Query: 2469 IPSHGEKSDKYITMNEKVGNDQKITASRKRKEIEGSRANTIGECQGLSLQRVNLMLDEDW 2290
I G + + +T N+ D + AS++RK+ E NT+GE QGLS RVN++LD+DW
Sbjct: 1064 IECDGAEGEG-VTFNKPRAKDLTLCASQRRKDSEKD-VNTVGESQGLSANRVNILLDKDW 1121
Query: 2289 ALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVNKNSLVNILST 2110
+L++DE+ +VA TRAR++IN+ D L N L + AKS+VL+ L G+RV + +++++
Sbjct: 1122 SLVNDETVIVAFTRARKEINIIGDASLVNNLKRSAKSTVLKKILGGERVTEGLILSLIRK 1181
Query: 2109 HLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXETSVQTPQRTHL 1930
L DV + G +D+MEE+L+GDPYLK E + PQ+THL
Sbjct: 1182 KLPDVIWLRRRCCSGQSDEMEEKLSGDPYLKGLLCLIDETEEEEVEIPEPELLEPQKTHL 1241
Query: 1929 WLSDGSNNVSISELKAKEHREAYTEAGITDQINEEGYKNSTADPMTHKALYLHHKNADVA 1750
L G N +SIS+L++KE RE TEAG TDQI+E GYK +PM HKALYL+H+N+DVA
Sbjct: 1242 PLCVGENELSISDLRSKESREVSTEAGRTDQIDELGYKGEPENPMNHKALYLYHQNSDVA 1301
Query: 1749 TFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPDTLPDLSRVETEFTK 1570
TF LS+RKRLRFRDPEKNRRK+NKC GFGAQ+F +MK Y L QPD LP L R E +F K
Sbjct: 1302 TFFLSIRKRLRFRDPEKNRRKFNKCKGFGAQMFGVMKSVYNLKQPDHLPLLERAEQDFMK 1361
Query: 1569 KRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLC 1390
KR+AKS KLIEKHSYRS+PDWPSNYL+IFLKQQ CTKMEKR VDAKAGQTIACF HAVLC
Sbjct: 1362 KRIAKSAKLIEKHSYRSEPDWPSNYLKIFLKQQRCTKMEKRKVDAKAGQTIACFCHAVLC 1421
Query: 1389 KFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGTDSDYEAFDRSQDEK 1210
+FG LR+TEKALR QL NVMIYSQKNYTDLD W + +V + GTDSDYEAFDRSQDEK
Sbjct: 1422 RFGPLLRQTEKALRDQLGPNVMIYSQKNYTDLDKWCKGFVHTLDGTDSDYEAFDRSQDEK 1481
Query: 1209 ILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFGTFFFNTVCNMAFTC 1030
+L FEV VLKFFLWPEE+I EYV LKLMMGCSMG LA+MRFSGEFGTFFFNT+CNM FTC
Sbjct: 1482 VLDFEVNVLKFFLWPEEMIEEYVTLKLMMGCSMGSLAVMRFSGEFGTFFFNTICNMGFTC 1541
Query: 1029 LRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVSESPLFCGWRMTPYG 850
L+YS+ DTPICYAGDDMY+PG+L K+ ++H+L ELQLKAKVN + SPLFCGWRM+PYG
Sbjct: 1542 LKYSIRADTPICYAGDDMYAPGILVTKSEFKHILDELQLKAKVNYTRSPLFCGWRMSPYG 1601
Query: 849 IVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVNIDIDAQQELVRRIV 670
IVKDPNLLLDRWKIAE DG LK+C NYALEAIYGYRLGEHL+D+N+DIDAQQ+L+RRIV
Sbjct: 1602 IVKDPNLLLDRWKIAERDGSLKNCMVNYALEAIYGYRLGEHLFDLNVDIDAQQDLIRRIV 1661
Query: 669 RVKDQLPKGIGRLYSSDPNECHSDGEELTIRVSAE 565
+K LP+ + R YS + EC SDGEE ++V E
Sbjct: 1662 LIKHLLPQSLQRFYSDEERECFSDGEEFNLKVRNE 1696
>gb|ABH06996.2| replication-related protein [Grapevine virus A]
Length = 1707
Score = 1062 bits (2747), Expect = 0.0
Identities = 546/1054 (51%), Positives = 714/1054 (67%), Gaps = 7/1054 (0%)
Frame = -3
Query: 3729 DEDFDHCLLQVYRENAGIGYHADDEPCY-KNNAVVTVNLSGTCQFHIS-CKGEKVF--EL 3562
D+ +DHCL+Q Y IG+HADDEPCY +VVTVNL G F + K EK+ EL
Sbjct: 643 DDSYDHCLIQRYTAGGSIGFHADDEPCYLPGGSVVTVNLFGDATFEVKENKSEKIEKKEL 702
Query: 3561 KDGDVLTMPEGCQHDHKHKVDCTSAGRISLTFRNGIT--EPDMGSDAYTEYSEEEPDLES 3388
DGDV M Q HKH+V + GR S+T RN E G D +EY E++ +L+
Sbjct: 703 HDGDVYVMGPRKQQTHKHRVTSHTDGRCSITLRNKTVDYETRRGDDG-SEYEEDKAELDE 761
Query: 3387 SMEILRKNGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKE 3208
++ L+KN N+C + ++HM ++ ++++N P+ + E++DGG+S+ TL+ + K
Sbjct: 762 GIDYLQKNQSNMCSLKAFADHMQLSIPSVIAVVNGASPQTLREIEDGGISLATLVNLSKA 821
Query: 3207 LDIPLYLQNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFE 3028
LD P+ + RG GS++ + H+E F G +G F EA+ V +F
Sbjct: 822 LDFPIAIHGERGYAETSGSYRRLHLKITSGHVEPFEGVTSKGGFKEAMLLGDGVGLGHFR 881
Query: 3027 YNAKRAKLLIESFQEGFTGVCLNKFQKGKGALGDPEGVGQVQVYTLFGFAGSGKSYYPQT 2848
+ +A L +SF G TGV L K+ KGK + EG ++V T FGFAGSGKS++ QT
Sbjct: 882 VDKAKADRLAQSFYNGNTGVLLGKYNKGKMHASETEG--SMEVLTSFGFAGSGKSHWCQT 939
Query: 2847 LLNGGAYNDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKRFKNIVVDEIGLLPHG 2668
+L + LVI PRK L DW K+ K VVTFE AF + K+IV+DEIGLLP G
Sbjct: 940 ILKHCSVEKVLVISPRKVLKDDWVAKISKKHKVVTFEVAFMDDYGCKDIVIDEIGLLPPG 999
Query: 2667 YLDMLCGAFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHRLPS 2488
Y+D++ A Q TL++LGDPLQ Y++K D++ L +E VF G+ YL +HRLP
Sbjct: 1000 YIDLVIAAHQPRTLVLLGDPLQSTYHSKRDNVVLEASQEDVFARIQGRLPYLCYSHRLPR 1059
Query: 2487 NQTIFEIPSHGEKSDKYITM-NEKVGNDQKITASRKRKEIEGSRANTIGECQGLSLQRVN 2311
N +FE+ G +S+K + + ++ ++ I A+R KE +GS T+ E QGLS +
Sbjct: 1060 NCKLFELECMGAESEKRVVYRSSRLKDEPTICATRAMKEEKGSGWYTVSETQGLSFKSCL 1119
Query: 2310 LMLDEDWALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVNKNS 2131
+ LDE WA DE MVALTR+R +I + V LK L+ +AKS++L+ L G+ ++
Sbjct: 1120 IYLDEHWAKKEDEDVMVALTRSRGEIGIHVTPALKKHLITNAKSTLLKKVLKGETYRRSE 1179
Query: 2130 LVNILSTHLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXETSVQ 1951
+V+++ H+ D ++ EE RL +T D E RLAGDPYLK E
Sbjct: 1180 IVSMVRKHIPDTTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEDVEIEEPVAL 1239
Query: 1950 TPQRTHLWLSDGSNNVSISELKAKEHREAYTEAGITDQINEEGYKNSTADPMTHKALYLH 1771
P +THL LS +N ++ +LKAKE+RE YT+AG T+QI+EEGY+ T DPMTHKALYL
Sbjct: 1240 EPTKTHLALSAKNNELAPFDLKAKEYREQYTDAGRTEQIDEEGYQGETGDPMTHKALYLR 1299
Query: 1770 HKNADVATFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPDTLPDLSR 1591
H + D ATFM+SV+KRLRFR+ E NRRKY C G G Q+F + K+TYQL + D+LP+L R
Sbjct: 1300 HTSDDTATFMMSVKKRLRFRNYEANRRKYKACHGIGHQMFSVFKDTYQLKEIDSLPELER 1359
Query: 1590 VETEFTKKRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAKAGQTIAC 1411
E EF +KR+ KS LIEKH+ RSDPDWPSNYL+IFLKQQ CTKMEKRGVDAKAGQTIAC
Sbjct: 1360 CEMEFMRKRIEKSTGLIEKHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIAC 1419
Query: 1410 FSHAVLCKFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGTDSDYEAF 1231
F+H+VLC+FG LR+TEKALR L +NVMIYSQKNY DLD W++ +V+ M+GTDSDYEAF
Sbjct: 1420 FAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAF 1479
Query: 1230 DRSQDEKILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFGTFFFNTV 1051
DRSQDEK+L EVEVL+FFLWPEELI EY ELKLMMGC++GDLA+MRFSGEFGTFFFNTV
Sbjct: 1480 DRSQDEKVLDLEVEVLRFFLWPEELIKEYEELKLMMGCALGDLAVMRFSGEFGTFFFNTV 1539
Query: 1050 CNMAFTCLRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVSESPLFCG 871
CNM F+C+RY + ++TPIC+AGDDMYSPG+L +K YE L++L LKAKV+VSE PLFCG
Sbjct: 1540 CNMVFSCMRYHMDRNTPICFAGDDMYSPGILRVKKDYETTLEQLTLKAKVHVSEEPLFCG 1599
Query: 870 WRMTPYGIVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVNIDIDAQQ 691
WRM+P+GI+K+PNL+LDRWKIA+ G L C NYA+EA +GYRL EHLYDVNID+DAQQ
Sbjct: 1600 WRMSPFGIIKEPNLILDRWKIAKRSGNLSLCLVNYAIEASFGYRLSEHLYDVNIDVDAQQ 1659
Query: 690 ELVRRIVRVKDQLPKGIGRLYSSDPNECHSDGEE 589
ELVR IV K LPK I L+S D E HSDG++
Sbjct: 1660 ELVREIVVKKHLLPKKISDLFSEDECEAHSDGDD 1693
>gb|AAO84267.1| replicase [Grapevine virus A]
Length = 1706
Score = 1058 bits (2735), Expect = 0.0
Identities = 548/1055 (51%), Positives = 710/1055 (67%), Gaps = 8/1055 (0%)
Frame = -3
Query: 3729 DEDFDHCLLQVYRENAGIGYHADDEPCY-KNNAVVTVNLSGTCQFHI----SCKGEKVFE 3565
DE +DHCL+Q Y E I +HADDEPCY VVTVNL+G F + S K E
Sbjct: 642 DESYDHCLIQRYSEGGSINFHADDEPCYLPGGTVVTVNLNGEAIFELKENTSGKTESK-R 700
Query: 3564 LKDGDVLTMPEGCQHDHKHKVDCTSAGRISLTFRNGITEPDMGSDAY-TEYSEEEPDLES 3388
LKDGDV TM G Q HKHKV + GR S+T RN + + ++A ++Y E+ L+
Sbjct: 701 LKDGDVFTMGAGMQQTHKHKVTSLTNGRCSITLRNKTVDYEARTEAINSDYEEDVAALDE 760
Query: 3387 SMEILRKNGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKE 3208
+E L+KN N+C + +EHM ++ +SI+N P+ + E++ GG+SV TL+ + +
Sbjct: 761 GIEYLQKNQGNMCSLKAFAEHMQLSIPSVISIVNGASPQTLREIEGGGISVATLVNLSRA 820
Query: 3207 LDIPLYLQNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFE 3028
LD P+ + RG PG+++ + H+E F G +G EAL + V F
Sbjct: 821 LDFPIAIHGERGYAETPGTYRRLHLKITTGHVEPFDGVISKGGLKEALLLSDGVGIGLFR 880
Query: 3027 YNAKRAKLLIESFQEGFTGVCLNKFQKGKGALGDPEGVGQV-QVYTLFGFAGSGKSYYPQ 2851
+ +A L +SF G TGV L K+ KGK EG+ + +V T FGFAGSGKS++ Q
Sbjct: 881 VDKNKADRLAQSFYNGNTGVLLGKYNKGKM---HSEGIDEPKEVLTAFGFAGSGKSHWCQ 937
Query: 2850 TLLNGGAYNDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKRFKNIVVDEIGLLPH 2671
T+L + LVI PRK L DW +K+ K VVTFE AF + K++V+DEIGLLP
Sbjct: 938 TILKHCSVEKALVISPRKVLKDDWTSKISKRHKVVTFEVAFMDDYGCKDVVIDEIGLLPP 997
Query: 2670 GYLDMLCGAFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHRLP 2491
GY+D++ + TL++LGDPLQ Y++K D++ L +E +F GQ YL +HRLP
Sbjct: 998 GYIDLVIAVHRPRTLVLLGDPLQSTYHSKRDNVVLEASQEDIFARIKGQLPYLCYSHRLP 1057
Query: 2490 SNQTIFEIPSHGEKSDKYITM-NEKVGNDQKITASRKRKEIEGSRANTIGECQGLSLQRV 2314
N +FE+ G +S+K +T + ++ ++ I A+R KE +GS T+ E QGLS +
Sbjct: 1058 KNCRLFELECMGAESEKRVTYRSSRLKDEPVICATRAMKEEKGSGWYTVSETQGLSFKSC 1117
Query: 2313 NLMLDEDWALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVNKN 2134
+ LDE WA DE MVALTR+R +I + V LK L+ AKS++LR L G+ ++
Sbjct: 1118 LIHLDEHWAKKEDEDVMVALTRSRGEIGINVTNALKKTLIASAKSTLLRKVLKGETYRRS 1177
Query: 2133 SLVNILSTHLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXETSV 1954
+V + H+ +V ++ EE RL + D E RLAGDPYLK E
Sbjct: 1178 EIVAMARKHIPEVTVLFEESRLAENVDYEARLAGDPYLKSLLSLYDEIEMDEVEIEEPVA 1237
Query: 1953 QTPQRTHLWLSDGSNNVSISELKAKEHREAYTEAGITDQINEEGYKNSTADPMTHKALYL 1774
P +THL LS+ N ++ ELKAKE+RE YT+AG T+QI+EEGY A+PMTHKALYL
Sbjct: 1238 LEPVKTHLALSEKMNELAPFELKAKEYREQYTDAGRTEQIDEEGYSGEEANPMTHKALYL 1297
Query: 1773 HHKNADVATFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPDTLPDLS 1594
H + D ATFM+SVRKRLRFR+ E NRRKY C G G Q+F + KETYQL + D+LPDL
Sbjct: 1298 RHTSDDTATFMMSVRKRLRFRNYEANRRKYKACNGIGKQMFSVFKETYQLKEIDSLPDLE 1357
Query: 1593 RVETEFTKKRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAKAGQTIA 1414
R E EF KKR+ KS LIE+H+ RSDPDWPSNYL+IFLKQQ CTKMEKRGVDAKAGQTIA
Sbjct: 1358 RCEMEFMKKRVEKSAGLIEQHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIA 1417
Query: 1413 CFSHAVLCKFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGTDSDYEA 1234
CF+H+VLC+FG LR+TE+ALR L +NVMIYSQKNY DLD W++ +V+ M+GTDSDYEA
Sbjct: 1418 CFAHSVLCRFGPILRQTERALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEA 1477
Query: 1233 FDRSQDEKILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFGTFFFNT 1054
FDRSQDEK+L EVEVL+FFLWPE+LI EY ELKLMMGC++GDLA+MRFSGEFGTFFFNT
Sbjct: 1478 FDRSQDEKVLDLEVEVLRFFLWPEDLIREYEELKLMMGCALGDLAVMRFSGEFGTFFFNT 1537
Query: 1053 VCNMAFTCLRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVSESPLFC 874
+CNM F+C+RY + ++TPIC+AGDDMYSPG+L KN YE L +L LKAKV++SE PLFC
Sbjct: 1538 ICNMVFSCMRYHMDRNTPICFAGDDMYSPGILRTKNDYEGTLDQLTLKAKVHISEEPLFC 1597
Query: 873 GWRMTPYGIVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVNIDIDAQ 694
GWRM+P+GIVK+PNL+LDRWKIA+ G L C NYA+EA +GYRL E+LYDVNID+DAQ
Sbjct: 1598 GWRMSPFGIVKEPNLILDRWKIAKRSGNLSLCLVNYAIEASFGYRLSEYLYDVNIDVDAQ 1657
Query: 693 QELVRRIVRVKDQLPKGIGRLYSSDPNECHSDGEE 589
QEL+R IV K LPK I L+S D E HSDG+E
Sbjct: 1658 QELIREIVEKKHLLPKKIADLFSEDECEAHSDGDE 1692
>gb|ABH06983.2| 194 kDa protein [Grapevine virus A]
Length = 1707
Score = 1055 bits (2727), Expect = 0.0
Identities = 545/1057 (51%), Positives = 709/1057 (67%), Gaps = 10/1057 (0%)
Frame = -3
Query: 3729 DEDFDHCLLQVYRENAGIGYHADDEPCY-KNNAVVTVNLSGTCQFHI----SCKGEKVFE 3565
DE +DHCL+Q Y + IG+HADDE CY +VVT+NL G F + + K +K+ +
Sbjct: 643 DESYDHCLIQRYSKGGSIGFHADDERCYLPGGSVVTLNLHGEAIFEVKENATGKVQKI-K 701
Query: 3564 LKDGDVLTMPEGCQHDHKHKVDCTSAGRISLTFRNGITEPDMGSDAY-TEYSEEEPDLES 3388
L DGDV TM G Q HKH+V+ + GR S+T RN T+ + + +EY E+ +L+
Sbjct: 702 LGDGDVYTMGPGMQQTHKHRVESCTEGRCSVTLRNKTTDYETRQEGNNSEYEEDVAELDE 761
Query: 3387 SMEILRKNGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKE 3208
+E L+KN N+C + ++HM ++ +SI+N P+ + E++ GG+SV TL+ + K
Sbjct: 762 GIEYLKKNSGNMCSLKAFADHMQLSIPSVISIVNGASPQTLREIESGGISVATLVNLSKA 821
Query: 3207 LDIPLYLQNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFE 3028
LD P+ + RG G ++++ H+E F G G F EAL + + F
Sbjct: 822 LDFPVAIHGERGYAETMGDYRKLHLKITAGHVEPFEGVNSRGGFKEALLLSDGIGIGRFR 881
Query: 3027 YNAKRAKLLIESFQEGFTGVCLNKFQKGK---GALGDPEGVGQVQVYTLFGFAGSGKSYY 2857
+ +A L +SF G TGV L K+ KGK L +P+ +V T FGFAGSGKS++
Sbjct: 882 VDKSKADRLAQSFHNGNTGVLLGKYNKGKIHAEWLDEPK-----EVLTAFGFAGSGKSHW 936
Query: 2856 PQTLLNGGAYNDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKRFKNIVVDEIGLL 2677
QT+L A LVI PRK L DW +K+ K VVTFE AF + K+IV+DEIGLL
Sbjct: 937 CQTILKHCAVEKVLVISPRKVLKDDWTSKISKKHKVVTFEVAFMDDYGCKDIVIDEIGLL 996
Query: 2676 PHGYLDMLCGAFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHR 2497
P GY+D++ + L++LGDPLQ Y++K D++ L +E VF G YL +HR
Sbjct: 997 PPGYIDLVIAVHRPRVLVLLGDPLQSTYHSKRDNVVLEASQEDVFSRVQGNLPYLCYSHR 1056
Query: 2496 LPSNQTIFEIPSHGEKSDKYIT-MNEKVGNDQKITASRKRKEIEGSRANTIGECQGLSLQ 2320
LP N T+FE+ G + DK I + ++ ++ I A+R KE +GS T+ E QGLS +
Sbjct: 1057 LPKNCTLFELECMGAECDKRIVHRSNRLKDEPVICATRAMKEEKGSGWYTVSETQGLSFK 1116
Query: 2319 RVNLMLDEDWALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVN 2140
+ LDE W DE MVALTR+R +I + LK L+ AKS++LR L G+
Sbjct: 1117 SCLIYLDEHWGKKEDEDVMVALTRSRGEIGIHASPALKKSLISTAKSTLLRKVLKGETYR 1176
Query: 2139 KNSLVNILSTHLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXET 1960
++ +V ++ H+ +V ++ EE RL + D E RLAGDPYLK E
Sbjct: 1177 RSEIVAMVKKHIPEVTVMFEESRLAENVDYEARLAGDPYLKSLLSLYDEIEMEEVEIEEP 1236
Query: 1959 SVQTPQRTHLWLSDGSNNVSISELKAKEHREAYTEAGITDQINEEGYKNSTADPMTHKAL 1780
+ P +THL LS+ N ++ +LKAKE RE YTEAG T+QI+EEGYK A+PMTHKAL
Sbjct: 1237 TALEPVKTHLALSEKLNELAPFDLKAKEDREQYTEAGRTEQIDEEGYKGEDANPMTHKAL 1296
Query: 1779 YLHHKNADVATFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPDTLPD 1600
YL H + D ATFM+SV+KRLRFR+ E NRRKY C G G Q+F + KE YQL + D+LP+
Sbjct: 1297 YLRHTSDDTATFMMSVKKRLRFRNFEANRRKYKACHGIGQQMFSVFKEIYQLKEIDSLPE 1356
Query: 1599 LSRVETEFTKKRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAKAGQT 1420
L R E EF KKR+ KS LIE+H+ RSDPDWPSNYL+IFLKQQ CTKMEKRGVDAKAGQT
Sbjct: 1357 LERCEMEFMKKRVEKSAVLIEQHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQT 1416
Query: 1419 IACFSHAVLCKFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGTDSDY 1240
IACF+H+VLCKFG LR+TEKALR L +NVMIYSQKNY DLD W+R +V+ M GTDSDY
Sbjct: 1417 IACFAHSVLCKFGPTLRQTEKALRELLPENVMIYSQKNYMDLDKWARTWVESMTGTDSDY 1476
Query: 1239 EAFDRSQDEKILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFGTFFF 1060
EAFDRSQDEK+L EVEVL+FFLWPE+LI EY ELKLMMGCS+GDLA+MRFSGEFGTFFF
Sbjct: 1477 EAFDRSQDEKVLDLEVEVLRFFLWPEDLIREYEELKLMMGCSLGDLAVMRFSGEFGTFFF 1536
Query: 1059 NTVCNMAFTCLRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVSESPL 880
NTVCNM FTC+RY + ++TP+C+AGDDMYSPG+L +K YE L++L LKAKV++SE PL
Sbjct: 1537 NTVCNMVFTCMRYHIDRNTPVCFAGDDMYSPGILRVKKDYEGTLEQLTLKAKVHISEEPL 1596
Query: 879 FCGWRMTPYGIVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVNIDID 700
FCGWRM+P+GIVK+PNL+LDRWK+A+ +G L C NYA+EA +GYRL EHLYD+NID+D
Sbjct: 1597 FCGWRMSPFGIVKEPNLILDRWKMAKRNGDLSLCMVNYAIEASFGYRLSEHLYDINIDVD 1656
Query: 699 AQQELVRRIVRVKDQLPKGIGRLYSSDPNECHSDGEE 589
AQQELVR IV K LPK I L+S D E HSDG+E
Sbjct: 1657 AQQELVREIVERKHLLPKKIANLFSDDECEAHSDGDE 1693
>gb|AAO17778.1| RNA-dependent RNA polymerase [Grapevine virus A]
Length = 1707
Score = 1054 bits (2725), Expect = 0.0
Identities = 547/1055 (51%), Positives = 709/1055 (67%), Gaps = 8/1055 (0%)
Frame = -3
Query: 3729 DEDFDHCLLQVYRENAGIGYHADDEPCY-KNNAVVTVNLSGTCQFHI----SCKGEKVFE 3565
DE +DHCL+Q Y E I +HADDEPCY VVTVNL+G F + S K E
Sbjct: 643 DESYDHCLIQRYSEGGSINFHADDEPCYLPGGTVVTVNLNGEAIFELKENTSGKTESK-R 701
Query: 3564 LKDGDVLTMPEGCQHDHKHKVDCTSAGRISLTFRNGITEPDMGSDAY-TEYSEEEPDLES 3388
LKDGDV TM G Q HKHKV + GR S+T RN + + ++A ++Y E+ L+
Sbjct: 702 LKDGDVFTMGAGMQQTHKHKVTSLTNGRCSITLRNKTVDYEARTEAINSDYEEDVAALDE 761
Query: 3387 SMEILRKNGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKE 3208
+E L+KN N+C + +EHM ++ +SI+N P+ + E++ GG+SV TL+ + +
Sbjct: 762 GIEYLQKNQGNMCSLKAFAEHMQLSIPSVISIVNGASPQTLREIEGGGISVATLVNLSRA 821
Query: 3207 LDIPLYLQNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFE 3028
LD P+ + RG PG+++ + H+E F G +G EAL + V F
Sbjct: 822 LDFPIAIHGERGYAETPGTYRRLHLKITTGHVEPFDGVISKGGLKEALLLSDGVGIGLFR 881
Query: 3027 YNAKRAKLLIESFQEGFTGVCLNKFQKGKGALGDPEGVGQV-QVYTLFGFAGSGKSYYPQ 2851
+ +A L +SF G TGV L K+ KGK EG+ + +V T FGFAGSGKS++ Q
Sbjct: 882 VDKNKADRLAQSFYNGNTGVLLGKYNKGKM---HSEGIDEPKEVLTAFGFAGSGKSHWCQ 938
Query: 2850 TLLNGGAYNDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKRFKNIVVDEIGLLPH 2671
T+L + LVI PRK L DW +K+ K VVTFE AF + K++V+DEIGLLP
Sbjct: 939 TILKHCSVEKALVISPRKVLKDDWTSKISKRHKVVTFEVAFMDDYGCKDVVIDEIGLLPP 998
Query: 2670 GYLDMLCGAFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHRLP 2491
GY+D++ + TL++LGDPLQ Y++K D++ L +E +F GQ YL +HRLP
Sbjct: 999 GYIDLVIAVHRPRTLVLLGDPLQSTYHSKRDNVVLEASQEDIFARIKGQLPYLCYSHRLP 1058
Query: 2490 SNQTIFEIPSHGEKSDKYITM-NEKVGNDQKITASRKRKEIEGSRANTIGECQGLSLQRV 2314
N +FE+ G +S+K +T + ++ ++ I A+R KE +GS T+ E QGLS +
Sbjct: 1059 KNCRLFELECMGAESEKRVTYRSSRLKDEPVICATRAMKEEKGSGWYTVSETQGLSFKSC 1118
Query: 2313 NLMLDEDWALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVNKN 2134
+ LDE WA DE MVALTR+R +I + V LK L+ AKS++LR L G+ ++
Sbjct: 1119 LIHLDEHWAKKEDEDVMVALTRSRGEIGINVTNALKKTLIASAKSTLLRKVLKGETYRRS 1178
Query: 2133 SLVNILSTHLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXETSV 1954
+V + H+ +V ++ EE RL + D E RLAGDPYLK E
Sbjct: 1179 EIVAMARKHIPEVTVLFEESRLAENVDYEARLAGDPYLKSLLSLYDEIEMDEVEIEEPVA 1238
Query: 1953 QTPQRTHLWLSDGSNNVSISELKAKEHREAYTEAGITDQINEEGYKNSTADPMTHKALYL 1774
P +THL LS+ N ++ ELKAKE+RE YT+AG T+QI+EEGY A+PMTHKALYL
Sbjct: 1239 LEPVKTHLALSEKMNELAPFELKAKEYREQYTDAGRTEQIDEEGYSGEEANPMTHKALYL 1298
Query: 1773 HHKNADVATFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPDTLPDLS 1594
H + D ATFM+SVRKRLRFR+ E NRRK C G G Q+F + KETYQL + D+LPDL
Sbjct: 1299 KHTSDDTATFMMSVRKRLRFRNYEANRRKSKACNGIGKQMFSVFKETYQLKEIDSLPDLE 1358
Query: 1593 RVETEFTKKRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAKAGQTIA 1414
R E EF KKR+ KS LIE+H+ RSDPDWPSNYL+IFLKQQ CTKMEKRGVDAKAGQTIA
Sbjct: 1359 RCEMEFMKKRVEKSAGLIEQHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIA 1418
Query: 1413 CFSHAVLCKFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGTDSDYEA 1234
CF+H+VLC+FG LR+TE+ALR L +NVMIYSQKNY DLD W++ +V+ M+GTDSDYEA
Sbjct: 1419 CFAHSVLCRFGPILRQTERALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEA 1478
Query: 1233 FDRSQDEKILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFGTFFFNT 1054
FDRSQDEK+L EVEVL+FFLWPE+LI EY ELKLMMGC++GDLA+MRFSGEFGTFFFNT
Sbjct: 1479 FDRSQDEKVLDLEVEVLRFFLWPEDLIREYEELKLMMGCALGDLAVMRFSGEFGTFFFNT 1538
Query: 1053 VCNMAFTCLRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVSESPLFC 874
+CNM F+C+RY + ++TPIC+AGDDMYSPG+L KN YE L +L LKAKV++SE PLFC
Sbjct: 1539 ICNMVFSCMRYHMDRNTPICFAGDDMYSPGILRTKNDYEGTLDQLTLKAKVHISEEPLFC 1598
Query: 873 GWRMTPYGIVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVNIDIDAQ 694
GWRM+P+GIVK+PNL+LDRWKIA+ G L C NYA+EA +GYRL E+LYDVNID+DAQ
Sbjct: 1599 GWRMSPFGIVKEPNLILDRWKIAKRSGNLSLCLVNYAIEASFGYRLSEYLYDVNIDVDAQ 1658
Query: 693 QELVRRIVRVKDQLPKGIGRLYSSDPNECHSDGEE 589
QEL+R IV K LPK I L+S D E HSDG+E
Sbjct: 1659 QELIREIVEKKHLLPKKIADLFSEDECEAHSDGDE 1693
>gb|AGT17853.1| putative replicase [Grapevine virus A]
Length = 1707
Score = 1053 bits (2724), Expect = 0.0
Identities = 546/1054 (51%), Positives = 708/1054 (67%), Gaps = 7/1054 (0%)
Frame = -3
Query: 3729 DEDFDHCLLQVYRENAGIGYHADDEPCY-KNNAVVTVNLSGTCQFHI----SCKGEKVFE 3565
D+ +DHCL+Q Y IG+HADDEPCY +VVTVNL G F + S + EK E
Sbjct: 643 DDSYDHCLIQRYTAGGSIGFHADDEPCYLPGGSVVTVNLLGDATFEVRENQSGRIEKK-E 701
Query: 3564 LKDGDVLTMPEGCQHDHKHKVDCTSAGRISLTFRNG-ITEPDMGSDAYTEYSEEEPDLES 3388
L DGDV M G Q H+H+V + GR S+T RN I D +EY E++ +L+
Sbjct: 702 LHDGDVYVMGPGMQQTHEHRVTSHTDGRCSITLRNKTIDYESRKGDEGSEYEEDKAELDE 761
Query: 3387 SMEILRKNGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKE 3208
+E L+KN N+C + ++HM ++ ++I+N P+ + E++DGG+S+ TL+ + K
Sbjct: 762 GIEYLQKNQGNMCSLKAFADHMQLSIPSVIAIVNGASPQTLREIEDGGISLATLVNLSKA 821
Query: 3207 LDIPLYLQNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFE 3028
LD P+ + RG PGS++ + H+E F G +G F EA+ V F
Sbjct: 822 LDFPIAIHGERGYAGTPGSYRRLHLKITSGHVEPFEGVTSKGGFREAMLLGDGVGLGRFR 881
Query: 3027 YNAKRAKLLIESFQEGFTGVCLNKFQKGKGALGDPEGVGQVQVYTLFGFAGSGKSYYPQT 2848
+ +A L +SF G TGV L K+ KGK G+ E +V T FGFAGSGKS++ QT
Sbjct: 882 VDKAKADRLAQSFYNGNTGVLLGKYNKGKMHTGEIEE--PKEVLTAFGFAGSGKSHWCQT 939
Query: 2847 LLNGGAYNDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKRFKNIVVDEIGLLPHG 2668
+L + LVI PRK L DW K+ K VVTFE AF + K+IV+DEIGLLP G
Sbjct: 940 ILKHCSVEKVLVISPRKVLKDDWVAKISKKHKVVTFEVAFMDDYGCKDIVIDEIGLLPPG 999
Query: 2667 YLDMLCGAFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHRLPS 2488
Y+D++ A Q TL++LGDPLQ Y++K D++ L +E VF G+ YL +HRLP
Sbjct: 1000 YIDLVIAAHQPRTLVLLGDPLQSTYHSKRDNVVLEASQEDVFNRVQGRLPYLCYSHRLPR 1059
Query: 2487 NQTIFEIPSHGEKSDKYITM-NEKVGNDQKITASRKRKEIEGSRANTIGECQGLSLQRVN 2311
N +FEI G + +K + + ++ ++ I A+R KE +GS T+ E QGLS +
Sbjct: 1060 NCNLFEIECMGAECEKRVVYRSNRLKDEPTICATRAMKEEKGSGWYTVSETQGLSFKSCL 1119
Query: 2310 LMLDEDWALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVNKNS 2131
+ LDE WA DE MVALTR+R +I + V LK L+ +AKS++L+ L G+ ++
Sbjct: 1120 IYLDEHWAKKEDEDVMVALTRSRGEIGIHVTPALKKNLINNAKSTLLKKVLKGETYRRSE 1179
Query: 2130 LVNILSTHLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXETSVQ 1951
+V ++ H+ D ++ EE RL +T D E RLAGDPYLK E
Sbjct: 1180 IVAMVRKHIPDTTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEEVEIEEPVAL 1239
Query: 1950 TPQRTHLWLSDGSNNVSISELKAKEHREAYTEAGITDQINEEGYKNSTADPMTHKALYLH 1771
P +THL LS +N ++ +LKAKE+RE YTE G T+QI+EEGY+ +PMTHKALYL
Sbjct: 1240 EPTKTHLALSTMTNELAPFDLKAKEYREQYTEVGRTEQIDEEGYQGEAGNPMTHKALYLR 1299
Query: 1770 HKNADVATFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPDTLPDLSR 1591
H + D ATFM+SV+KRLRFR+ E NRRKY C G G Q+F + K+TYQL + D+LP+L R
Sbjct: 1300 HTSDDTATFMMSVKKRLRFRNYEANRRKYRACHGIGHQMFSVFKDTYQLKEIDSLPELER 1359
Query: 1590 VETEFTKKRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAKAGQTIAC 1411
E EF KKR+ KS LIEKH+ RSDPDWPSNYL+IFLKQQ CTKMEKRGVDAKAGQTIAC
Sbjct: 1360 CEMEFMKKRIEKSTGLIEKHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIAC 1419
Query: 1410 FSHAVLCKFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGTDSDYEAF 1231
F+H+VLC+FG LR+TEKALR L +NVMIYSQKNY DLD W++ +V+ M+GTDSDYEAF
Sbjct: 1420 FAHSVLCRFGPILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAF 1479
Query: 1230 DRSQDEKILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFGTFFFNTV 1051
DRSQDEK+L EVEVL+FFLWPEELI EY ELKLMMGC++GDLA+MRFSGEFGTFFFNTV
Sbjct: 1480 DRSQDEKVLDLEVEVLRFFLWPEELIKEYEELKLMMGCALGDLAVMRFSGEFGTFFFNTV 1539
Query: 1050 CNMAFTCLRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVSESPLFCG 871
CNM F+C+RY + ++TP+C+AGDDMYSPG+L +K YE L++L LKAKV+VSE PLFCG
Sbjct: 1540 CNMVFSCMRYHMDRNTPMCFAGDDMYSPGILRVKKDYEATLEQLTLKAKVHVSEEPLFCG 1599
Query: 870 WRMTPYGIVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVNIDIDAQQ 691
WRM+P+GI+K+PNL+LDRWKIA G L C NYA+EA +GYRL EHLYDVNID+DAQQ
Sbjct: 1600 WRMSPFGIIKEPNLILDRWKIALRSGNLSLCLVNYAIEASFGYRLSEHLYDVNIDVDAQQ 1659
Query: 690 ELVRRIVRVKDQLPKGIGRLYSSDPNECHSDGEE 589
ELVR IV K LPK I L+S D E HSDG++
Sbjct: 1660 ELVREIVIKKHLLPKKIADLFSEDECEAHSDGDD 1693
>ref|NP_619662.1| putative replicase [Grapevine virus A]
gi|81937291|sp|Q67704.1|RDRP_GVAIS RecName: Full=RNA
replication protein; Includes: RecName: Full=RNA-directed
RNA polymerase; Includes: RecName: Full=Helicase
gi|1405615|emb|CAA53182.1| putative replicase [Grapevine
virus A]
Length = 1707
Score = 1053 bits (2722), Expect = 0.0
Identities = 544/1054 (51%), Positives = 707/1054 (67%), Gaps = 7/1054 (0%)
Frame = -3
Query: 3729 DEDFDHCLLQVYRENAGIGYHADDEPCY-KNNAVVTVNLSGTCQFHI----SCKGEKVFE 3565
D+ +DHCL+Q Y IG+HADDEPCY +VVTVNL G F + S K EK E
Sbjct: 643 DDSYDHCLIQRYTAGGSIGFHADDEPCYLPGGSVVTVNLHGDATFEVKENQSGKIEKK-E 701
Query: 3564 LKDGDVLTMPEGCQHDHKHKVDCTSAGRISLTFRNGITEPDMGS-DAYTEYSEEEPDLES 3388
L DGDV M G Q HKH+V + GR S+T RN + + D +EY E++ +L+
Sbjct: 702 LHDGDVYVMGPGMQQTHKHRVTSHTDGRCSITLRNKTVDYEARKGDEDSEYEEDKAELDE 761
Query: 3387 SMEILRKNGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKE 3208
++ L+KN N+C + ++HM ++ ++I+N P+ + E++DGG S+ TL+ + K
Sbjct: 762 GIDYLQKNQGNMCSLKAFADHMQLSTPSVIAIVNGASPQTLREIEDGGYSLATLVNLSKA 821
Query: 3207 LDIPLYLQNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFE 3028
LD P+ + RG PGS++ + H+E F G +G F EA+ V +F
Sbjct: 822 LDFPIAIHGERGYAETPGSYRRLHLKITSGHVEPFEGVTSKGGFREAMLLGDGVGVGHFR 881
Query: 3027 YNAKRAKLLIESFQEGFTGVCLNKFQKGKGALGDPEGVGQVQVYTLFGFAGSGKSYYPQT 2848
+ +A L +SF G TGV L K+ KGK G+ E +V T FGFAGSGKS++ QT
Sbjct: 882 VDKAKADRLAQSFYNGNTGVLLGKYNKGKMHTGEIEE--PKEVLTAFGFAGSGKSHWCQT 939
Query: 2847 LLNGGAYNDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKRFKNIVVDEIGLLPHG 2668
+L + LVI PRK L DW K+ K VVTFE AF + K+IV+DEIGLLP G
Sbjct: 940 ILKHCSVEKVLVISPRKVLRDDWVAKISKKHRVVTFEVAFMDDYGCKDIVIDEIGLLPPG 999
Query: 2667 YLDMLCGAFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHRLPS 2488
Y+D++ A Q TL++LGDPLQ Y++K D++ L +E VF G+ YL +HRLP
Sbjct: 1000 YIDLVIAAHQPRTLVLLGDPLQSTYHSKRDNVVLEASQEDVFNRVRGKLPYLCYSHRLPR 1059
Query: 2487 NQTIFEIPSHGEKSDKYITM-NEKVGNDQKITASRKRKEIEGSRANTIGECQGLSLQRVN 2311
N +FEI G +S+K + + ++ ++ I A+R KE +GS T+ E QGLS +
Sbjct: 1060 NCKLFEIECMGAESEKRVVYRSNRLKDEPTICATRAMKEEKGSGWYTVSETQGLSFKSCL 1119
Query: 2310 LMLDEDWALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVNKNS 2131
+ LDE WA DE MVALTR+R +I + V LK KL+ +AKS++L+ L G+ ++
Sbjct: 1120 IYLDEHWAKKEDEDVMVALTRSRGEIGIHVTPALKKKLITNAKSTLLKKVLKGETYRRSE 1179
Query: 2130 LVNILSTHLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXETSVQ 1951
+V ++ H+ + ++ EE RL +T D E RLAGDPYLK E
Sbjct: 1180 IVAMVRKHIPETTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEDIEIEEPVTL 1239
Query: 1950 TPQRTHLWLSDGSNNVSISELKAKEHREAYTEAGITDQINEEGYKNSTADPMTHKALYLH 1771
P +THL LS N ++ +LKAKEHRE +TEAG T+QI+E GY+ DPMTHKALYL
Sbjct: 1240 EPTKTHLALSTKMNELAPFDLKAKEHREQHTEAGRTEQIDENGYQGEVGDPMTHKALYLR 1299
Query: 1770 HKNADVATFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPDTLPDLSR 1591
H + D ATFM+SV+KRLRFR+ E NRRKY C G G Q+F + K+TYQL + D+LP+L R
Sbjct: 1300 HTSDDTATFMMSVKKRLRFRNYEANRRKYKTCHGIGHQMFSVFKDTYQLKEIDSLPELER 1359
Query: 1590 VETEFTKKRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAKAGQTIAC 1411
E EF KKR+ KS LIEKH+ RSDPDWPSNYL+IFLKQQ CTKMEKRGVDAKAGQTIAC
Sbjct: 1360 CEMEFMKKRIEKSTGLIEKHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIAC 1419
Query: 1410 FSHAVLCKFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGTDSDYEAF 1231
F+H+VLC+FG LR+TEKALR L + +MIYSQK Y DLD W++ +V+ M+GTDSDYEAF
Sbjct: 1420 FAHSVLCRFGPILRQTEKALRELLPEKLMIYSQKKYMDLDKWAKTWVESMMGTDSDYEAF 1479
Query: 1230 DRSQDEKILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFGTFFFNTV 1051
DRSQDEK+L EVEVL+FFLWPE+LI EY ELKLMMGC++GDLA+MRFSGEFGTFFFNTV
Sbjct: 1480 DRSQDEKVLDLEVEVLRFFLWPEDLIREYEELKLMMGCALGDLAVMRFSGEFGTFFFNTV 1539
Query: 1050 CNMAFTCLRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVSESPLFCG 871
CNM F+C+RY + ++TP+C+AGDDMYSPG+L +K YE L +L LKAKV++SE PLFCG
Sbjct: 1540 CNMVFSCMRYHIDRNTPMCFAGDDMYSPGILRVKKDYEATLDQLTLKAKVHISEEPLFCG 1599
Query: 870 WRMTPYGIVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVNIDIDAQQ 691
WRM+P+GI+K+PNL+LDRWKIA G L C NYA+EA +GYRL EHLYDVNID+DAQQ
Sbjct: 1600 WRMSPFGIIKEPNLILDRWKIALRSGNLSLCLVNYAIEASFGYRLSEHLYDVNIDVDAQQ 1659
Query: 690 ELVRRIVRVKDQLPKGIGRLYSSDPNECHSDGEE 589
ELVR IV K LPK I L+S D E HSDG+E
Sbjct: 1660 ELVREIVIKKHLLPKKISDLFSEDECERHSDGDE 1693
>gb|ABH07008.1| putative replicase [Grapevine virus A]
Length = 1710
Score = 1052 bits (2721), Expect = 0.0
Identities = 545/1053 (51%), Positives = 702/1053 (66%), Gaps = 6/1053 (0%)
Frame = -3
Query: 3729 DEDFDHCLLQVYRENAGIGYHADDEPCY-KNNAVVTVNLSGTCQFHISCKGEKVFE---L 3562
DE +DHCL+Q Y ++ IG+HADDEPCY +VVTVNL+G F + V + +
Sbjct: 646 DESYDHCLIQRYMKDGAIGFHADDEPCYLPGGSVVTVNLNGEALFEVKENSSGVIKKIHM 705
Query: 3561 KDGDVLTMPEGCQHDHKHKVDCTSAGRISLTFRNGITEPD-MGSDAYTEYSEEEPDLESS 3385
KDGDV TM G Q HKH+V S GR S+T R+ + + + +EY E+ D +
Sbjct: 706 KDGDVYTMGPGMQQTHKHRVQSLSDGRCSITLRDKTVDYEAQRKEGSSEYEEDIADADEG 765
Query: 3384 MEILRKNGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKEL 3205
+E L++N N+C + I+EHM ++ VSI+N + P+ ++E++ GG+SV TL+ + + L
Sbjct: 766 IEYLKRNSANMCSLKAIAEHMQLSIPTVVSIVNGESPQTLKEIESGGVSVATLVSLSRTL 825
Query: 3204 DIPLYLQNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFEY 3025
P+ L NRG + G ++++ D H+E F G G EAL + + F
Sbjct: 826 GFPIALHGNRGFAQTQGDYRKLHLRVGDGHVEPFEGVASSGGLREALLLSDGIGQGIFRV 885
Query: 3024 NAKRAKLLIESFQEGFTGVCLNKFQKGKGALGDPEGVGQVQVYTLFGFAGSGKSYYPQTL 2845
+ +A L +SF G TGV L K+ KGK + E +V T FGFAGSGKS++ QT+
Sbjct: 886 DKVKADRLAQSFYSGCTGVLLGKYNKGKMHAAELEE--PTEVLTSFGFAGSGKSHWCQTI 943
Query: 2844 LNGGAYNDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKRFKNIVVDEIGLLPHGY 2665
L TLVI PRK L DW K+ K VVTFE AF + K IV+DEIGLLP GY
Sbjct: 944 LRSCDVEKTLVISPRKVLKDDWAGKISKKHKVVTFEVAFMDDFGCKAIVIDEIGLLPPGY 1003
Query: 2664 LDMLCGAFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHRLPSN 2485
+D++ F TL++LGDPLQ Y++K D++ L +E +F G YL +HR P N
Sbjct: 1004 IDLVISVFHPNTLVLLGDPLQSSYHSKRDNVILEASQEDIFNRIKGALPYLCYSHRPPKN 1063
Query: 2484 QTIFEIPSHGEKSDKYITMNEKVGNDQK-ITASRKRKEIEGSRANTIGECQGLSLQRVNL 2308
IFEI G +++K IT K G D+ I A+R +E+ GS T+ E QGLS + +
Sbjct: 1064 CKIFEIECMGGEAEKRITFRSKRGKDEPVICATRAMREMNGSGWYTVSETQGLSFKTCMI 1123
Query: 2307 MLDEDWALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVNKNSL 2128
L E WA +DE MVA TR+R +I + VD KLK L++ +KS +LR L G+ ++S+
Sbjct: 1124 QLCEHWAKKNDEDVMVAFTRSRGEIAISVDRKLKEVLLRTSKSELLRKILSGETYRRSSI 1183
Query: 2127 VNILSTHLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXETSVQT 1948
+ ++ H+ + +V EE RL D EERLAGDPYLK E
Sbjct: 1184 IALVKKHIPEALIVFEENRLASNVDYEERLAGDPYLKSLLSLYEDIEEEEVEIEEPVALE 1243
Query: 1947 PQRTHLWLSDGSNNVSISELKAKEHREAYTEAGITDQINEEGYKNSTADPMTHKALYLHH 1768
P RTHL LS+ N + +LKAKE RE YTEAG T+QI+EEGY A+PMTHKALYL H
Sbjct: 1244 PIRTHLPLSEKLNELIPFDLKAKEDREQYTEAGRTEQIDEEGYGQWGANPMTHKALYLRH 1303
Query: 1767 KNADVATFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPDTLPDLSRV 1588
+ D ATFM+SV+KRLR+R E NRRKY C G G Q+F ++KETYQ ++LP+L +
Sbjct: 1304 TSDDTATFMMSVKKRLRYRSYEGNRRKYLSCHGIGRQMFSVLKETYQWKDIESLPELEKC 1363
Query: 1587 ETEFTKKRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAKAGQTIACF 1408
E EF +KR+ KS LIE+HS RSDPDWPSNYL+IFLKQQ CTKMEKRGVDAKAGQTIACF
Sbjct: 1364 EKEFMRKRVEKSAALIEQHSGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACF 1423
Query: 1407 SHAVLCKFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGTDSDYEAFD 1228
+H+VLC+FG LR+TEKA R L +NVMIYSQKNY DLD WS+ +V+ M+GTDSDYEAFD
Sbjct: 1424 AHSVLCRFGPLLRQTEKAFRELLPENVMIYSQKNYMDLDKWSKTWVEGMLGTDSDYEAFD 1483
Query: 1227 RSQDEKILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFGTFFFNTVC 1048
RSQDEKIL E+EVL+FFLWPEE+I EY LKLMMG ++GDLAIMRFSGEFGTFFFNT+
Sbjct: 1484 RSQDEKILDMEIEVLRFFLWPEEMIQEYETLKLMMGSALGDLAIMRFSGEFGTFFFNTLS 1543
Query: 1047 NMAFTCLRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVSESPLFCGW 868
NM F+C+RY L K+TPIC+AGDDMYSPGVL ++ YE L+EL LKAKV+VSE PLFCGW
Sbjct: 1544 NMVFSCMRYHLDKNTPICFAGDDMYSPGVLQVRKDYEKTLEELTLKAKVHVSEEPLFCGW 1603
Query: 867 RMTPYGIVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVNIDIDAQQE 688
RM+PYGI+K+PNL+LDRWKIA+ G L C NYA+EA +GYRL E+LYDVNID+DAQQE
Sbjct: 1604 RMSPYGIIKEPNLILDRWKIAQRSGNLDLCIVNYAIEASFGYRLSEYLYDVNIDVDAQQE 1663
Query: 687 LVRRIVRVKDQLPKGIGRLYSSDPNECHSDGEE 589
L+R IV K +LPK I L+S D E HSDG++
Sbjct: 1664 LIREIVEHKHKLPKKIAGLFSDDECEAHSDGDD 1696
>gb|ABG37965.1| putative replicase [Grapevine virus A]
Length = 1710
Score = 1052 bits (2720), Expect = 0.0
Identities = 548/1056 (51%), Positives = 703/1056 (66%), Gaps = 9/1056 (0%)
Frame = -3
Query: 3729 DEDFDHCLLQVYRENAGIGYHADDEPCY-KNNAVVTVNLSGTCQFHI---SCKGEKVFEL 3562
DE +DHCL+Q Y ++ IG+HADDEPCY +VVTVNL+G F + S K +
Sbjct: 646 DESYDHCLIQRYVKDGAIGFHADDEPCYLPGGSVVTVNLNGEALFEVKENSSGAIKQIHM 705
Query: 3561 KDGDVLTMPEGCQHDHKHKVDCTSAGRISLTFRNGITEPD-MGSDAYTEYSEEEPDLESS 3385
KDGDV TM G Q HKH+V S GR S+T R+ + + + +EY E+ D +
Sbjct: 706 KDGDVYTMGPGMQQTHKHRVQSLSDGRCSITVRDKTVDYEAQRKEGSSEYEEDVADADEG 765
Query: 3384 MEILRKNGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKEL 3205
+E L++N N+C + I+EHM ++ VSI+N + P+ ++E++ GG+SV TL+ + + L
Sbjct: 766 IEYLKRNSANMCSLKAIAEHMQLSIPTVVSIVNGESPQTLKEIESGGVSVATLVGLSRTL 825
Query: 3204 DIPLYLQNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFEY 3025
P+ L +RG + G ++++ D H+E F G G EAL + V F
Sbjct: 826 GFPIALHGDRGFAQTQGDYRKLHLRVGDGHVEPFEGVASSGGLKEALLLSDGVGQGIFRV 885
Query: 3024 NAKRAKLLIESFQEGFTGVCLNKFQKGK---GALGDPEGVGQVQVYTLFGFAGSGKSYYP 2854
+ +A L +SF G TGV L K+ KGK L +P +V T FGFAGSGKS++
Sbjct: 886 DKAKADRLAQSFYSGCTGVLLGKYNKGKMHAAELDEP-----TEVLTSFGFAGSGKSHWC 940
Query: 2853 QTLLNGGAYNDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKRFKNIVVDEIGLLP 2674
QT+L TL+I PRK L DW K+ K VVTFE AF + K IV+DEIGLLP
Sbjct: 941 QTILRSCDVEKTLIISPRKVLKDDWVGKISKKHKVVTFEVAFMDDFGCKAIVIDEIGLLP 1000
Query: 2673 HGYLDMLCGAFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHRL 2494
GY+D++ F TL++LGDPLQ Y++K D++ L +E VF G YL +HRL
Sbjct: 1001 PGYIDLVISVFHPSTLVLLGDPLQSSYHSKRDNVILEASQEDVFSRIKGALPYLCYSHRL 1060
Query: 2493 PSNQTIFEIPSHGEKSDKYITMNEKVGNDQK-ITASRKRKEIEGSRANTIGECQGLSLQR 2317
P N IFEI G +++K IT K G D+ I A+R +E+ GS T+ E QGLS +
Sbjct: 1061 PKNCKIFEIECMGGEAEKRITFRSKRGKDEPVICATRAMREMNGSGWYTVSETQGLSFKT 1120
Query: 2316 VNLMLDEDWALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVNK 2137
+ L E WA DE MVA TR+R +I + VD+KLK L++ +KS +LR L G+ +
Sbjct: 1121 CMIQLCEHWAKKEDEDVMVAFTRSRGEIAISVDKKLKEVLLRTSKSELLRKILSGETYRR 1180
Query: 2136 NSLVNILSTHLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXETS 1957
+S++ ++ H+ + +V EE RL D EERLAGDPYLK E
Sbjct: 1181 SSIIALVKKHIPEALVVFEENRLASNVDYEERLAGDPYLKSLLSLYEDIEEEEVEIEEPV 1240
Query: 1956 VQTPQRTHLWLSDGSNNVSISELKAKEHREAYTEAGITDQINEEGYKNSTADPMTHKALY 1777
P RTHL LS+ N + +LKAKE RE YTEAG T+QI+EEGY A+PMTHKALY
Sbjct: 1241 ALEPIRTHLPLSEKLNELIPFDLKAKEDREQYTEAGRTEQIDEEGYGQWGANPMTHKALY 1300
Query: 1776 LHHKNADVATFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPDTLPDL 1597
L H + D ATFM+SV+KRLR+R E NRRKY C G G Q+F ++KETYQ ++LP+L
Sbjct: 1301 LRHTSDDTATFMMSVKKRLRYRSYEGNRRKYLSCHGIGRQMFSVLKETYQWKDIESLPEL 1360
Query: 1596 SRVETEFTKKRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAKAGQTI 1417
+ E EF +KR+ KS LIE+HS RSDPDWPSNYL+IFLKQQ CTKMEKRGVDAKAGQTI
Sbjct: 1361 EKCEKEFMRKRVEKSAALIEQHSGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTI 1420
Query: 1416 ACFSHAVLCKFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGTDSDYE 1237
ACF+H+VLC+FG LR+TEKA R L +NVMIYSQKNY DLD WS+ +V+ M+GTDSDYE
Sbjct: 1421 ACFAHSVLCRFGPLLRQTEKAFRELLPENVMIYSQKNYMDLDKWSKTWVEGMLGTDSDYE 1480
Query: 1236 AFDRSQDEKILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFGTFFFN 1057
AFDRSQDEKIL E+EVL+FFLWPEE+I EY LKLMMG ++GDLAIMRFSGEFGTFFFN
Sbjct: 1481 AFDRSQDEKILDMEIEVLRFFLWPEEMIQEYETLKLMMGSALGDLAIMRFSGEFGTFFFN 1540
Query: 1056 TVCNMAFTCLRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVSESPLF 877
T+ NM F+C+RY L K+TPIC+AGDDMYSPGVL ++ YE L EL LKAKV+VSE PLF
Sbjct: 1541 TLSNMVFSCMRYHLDKNTPICFAGDDMYSPGVLQVRKDYEKTLDELTLKAKVHVSEEPLF 1600
Query: 876 CGWRMTPYGIVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVNIDIDA 697
CGWRM+PYGI+K+PNL+LDRWKIA+ G L C NYA+EA +GYRL E+LYDVNID+DA
Sbjct: 1601 CGWRMSPYGIIKEPNLILDRWKIAQRSGNLDLCIVNYAIEASFGYRLSEYLYDVNIDVDA 1660
Query: 696 QQELVRRIVRVKDQLPKGIGRLYSSDPNECHSDGEE 589
QQEL+R IV K +LPK I L+S D E HSDG++
Sbjct: 1661 QQELIREIVEHKHKLPKKIAGLFSDDECEAHSDGDD 1696
>gb|AFV73358.1| 195 kDa replicase [Grapevine virus A]
Length = 1710
Score = 1050 bits (2715), Expect = 0.0
Identities = 543/1053 (51%), Positives = 704/1053 (66%), Gaps = 6/1053 (0%)
Frame = -3
Query: 3729 DEDFDHCLLQVYRENAGIGYHADDEPCY-KNNAVVTVNLSGTCQFHISCKGEKVFE---L 3562
DE +DHCL+Q Y++ IG+HADDEPCY +VVTVNL+G F + E +
Sbjct: 646 DESYDHCLIQRYKKEGSIGFHADDEPCYLPGGSVVTVNLNGEAIFEVKENKSGTTEEIHM 705
Query: 3561 KDGDVLTMPEGCQHDHKHKVDCTSAGRISLTFRNGITEPD-MGSDAYTEYSEEEPDLESS 3385
KDGDV TM G Q HKH+V S GR S+T RN + + + ++Y E+ D++
Sbjct: 706 KDGDVYTMGPGMQQTHKHRVRSLSDGRCSITLRNKTVDYEAQRKEETSDYEEDVADVDEG 765
Query: 3384 MEILRKNGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKEL 3205
+E L++N N+C + I+EHM ++ VSI+N + P+ ++E++ GG+SV TL+ + + L
Sbjct: 766 IEYLQRNSANMCSLKAIAEHMQLSIPTVVSIVNGESPQTLKEIESGGVSVATLVSLSRAL 825
Query: 3204 DIPLYLQNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFEY 3025
P+ L +RG + G ++++ D H+E F G G EAL + V F
Sbjct: 826 GFPIALHGDRGFAQTQGDYRKLHLRVGDGHVEPFEGVASTGGLREALLLSDGVGQGIFRV 885
Query: 3024 NAKRAKLLIESFQEGFTGVCLNKFQKGKGALGDPEGVGQVQVYTLFGFAGSGKSYYPQTL 2845
+ +A L +SF G TGV L K+ KGK + E V+V T FGFAGSGKS++ QT+
Sbjct: 886 DKAKADRLAQSFYSGCTGVLLGKYNKGK--MHSAELEEPVEVLTSFGFAGSGKSHWCQTI 943
Query: 2844 LNGGAYNDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKRFKNIVVDEIGLLPHGY 2665
L TL+I PRK L DW K+ K VVTFE AF + K IV+DEIGLLP GY
Sbjct: 944 LRSCDVEKTLIISPRKVLKDDWVGKISKKHKVVTFEVAFMDDFGCKAIVIDEIGLLPPGY 1003
Query: 2664 LDMLCGAFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHRLPSN 2485
+D++ F+ TL++LGDPLQ Y++K D++ L +E VF G YL +HRLP N
Sbjct: 1004 IDLVISVFRPSTLVLLGDPLQSSYHSKRDNVVLEASQEDVFSRIKGALPYLCYSHRLPKN 1063
Query: 2484 QTIFEIPSHGEKSDKYITMNEKVGNDQK-ITASRKRKEIEGSRANTIGECQGLSLQRVNL 2308
IFEI G +++K +T K G D+ I A+R KE GS T+ E QGLS + +
Sbjct: 1064 CKIFEIECMGNETEKRVTFRSKRGKDEPVICATRAMKEANGSGWYTVSETQGLSFKTCMI 1123
Query: 2307 MLDEDWALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVNKNSL 2128
L E WA DE MVA TR+R +I + VD KLK L++ +KS +L+ L G+ ++S+
Sbjct: 1124 KLCEHWAKKEDEDVMVAFTRSRGEIAIDVDRKLKEMLLRTSKSELLKKILSGETYRRSSI 1183
Query: 2127 VNILSTHLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXETSVQT 1948
+ ++ H+ + ++ EE RL D EERLAGDPYLK E
Sbjct: 1184 IALVKKHIPEAVIIFEENRLASNVDYEERLAGDPYLKSLLSLYEDIEEEEVTLEEPVALE 1243
Query: 1947 PQRTHLWLSDGSNNVSISELKAKEHREAYTEAGITDQINEEGYKNSTADPMTHKALYLHH 1768
P RTHL LS+ N + +LKAKE RE YT+AG T+QI+EEGY +A+PM+HKALYL H
Sbjct: 1244 PIRTHLPLSEKLNELVPFDLKAKEDREQYTDAGRTEQIDEEGYAQWSANPMSHKALYLRH 1303
Query: 1767 KNADVATFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPDTLPDLSRV 1588
+ D ATFM+SV+KRLR+R E NRRKY C G G Q+F ++KETYQ ++LP+L +
Sbjct: 1304 TSDDTATFMMSVKKRLRYRSYEGNRRKYLACHGIGRQMFSVLKETYQWRDIESLPELEKC 1363
Query: 1587 ETEFTKKRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAKAGQTIACF 1408
E EF +KR+ KS LIE+HS RSDPDWPSNYL+IFLKQQ CTKMEKRGVDAKAGQTIACF
Sbjct: 1364 EKEFMRKRVEKSAALIEQHSGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACF 1423
Query: 1407 SHAVLCKFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGTDSDYEAFD 1228
+H+VLC+FG LR+TEKA R L +NVMIYSQKNY DLD W++ +V+ M+GTDSDYEAFD
Sbjct: 1424 AHSVLCRFGPLLRQTEKAFRELLPENVMIYSQKNYMDLDKWAKTWVEGMLGTDSDYEAFD 1483
Query: 1227 RSQDEKILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFGTFFFNTVC 1048
RSQDEKIL E+EVLKFFLWPEE+I EY LKLMMG ++GDLAIMRFSGEFGTFFFNT+
Sbjct: 1484 RSQDEKILDMEIEVLKFFLWPEEMIKEYETLKLMMGSALGDLAIMRFSGEFGTFFFNTLS 1543
Query: 1047 NMAFTCLRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVSESPLFCGW 868
NM F+C+RY L+K+TPIC+AGDDMYSPGVL ++ YE L EL LKAKV+VSE PLFCGW
Sbjct: 1544 NMVFSCMRYHLSKNTPICFAGDDMYSPGVLQVRKDYEKTLDELTLKAKVHVSEEPLFCGW 1603
Query: 867 RMTPYGIVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVNIDIDAQQE 688
RM+PYGI+K+PNL+LDRWKIA+ G L C NYA+EA +GYRL E+LYDVNID+DAQQE
Sbjct: 1604 RMSPYGIIKEPNLILDRWKIAQRSGTLDLCIVNYAIEASFGYRLSEYLYDVNIDVDAQQE 1663
Query: 687 LVRRIVRVKDQLPKGIGRLYSSDPNECHSDGEE 589
L+R IV K +LPK I L+S D E HSDG++
Sbjct: 1664 LIREIVEHKHKLPKKIAGLFSDDECEAHSDGDD 1696
>gb|ABH06992.2| 194 kDa protein [Grapevine virus A]
Length = 1707
Score = 1045 bits (2702), Expect = 0.0
Identities = 541/1067 (50%), Positives = 708/1067 (66%), Gaps = 9/1067 (0%)
Frame = -3
Query: 3729 DEDFDHCLLQVYRENAGIGYHADDEPCY-KNNAVVTVNLSGTCQFHISCKGEKVFE---L 3562
DE +DHCL+Q Y + IG+HADDE CY +VVT+NL G F + E L
Sbjct: 643 DESYDHCLIQRYSKGGSIGFHADDESCYLPGGSVVTLNLHGEAIFEVKENATGKIEQIKL 702
Query: 3561 KDGDVLTMPEGCQHDHKHKVDCTSAGRISLTFRNGITEPDMGSDAY-TEYSEEEPDLESS 3385
KDGDV TM G Q HKH+V + GR S+T RN T+ + + +EY E+ +L+
Sbjct: 703 KDGDVYTMGPGMQQSHKHRVVSCTEGRCSVTLRNKTTDYETRREGNNSEYEEDVAELDEG 762
Query: 3384 MEILRKNGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKEL 3205
+E L+KN N+C + ++HM ++ +SI+N P+ + E++ GG+SV TL+ + K L
Sbjct: 763 IEYLQKNSGNMCSLKAFADHMQLSIPSVISIVNGASPQTLREIESGGISVATLVNLSKAL 822
Query: 3204 DIPLYLQNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFEY 3025
D P+ + RG G ++++ H+E G +G F EAL + + F
Sbjct: 823 DFPVAIHGERGYAETAGDYRKLHLKITAGHVEPLDGVNSKGGFKEALLLSDGIGIGRFRS 882
Query: 3024 NAKRAKLLIESFQEGFTGVCLNKFQKGKGA---LGDPEGVGQVQVYTLFGFAGSGKSYYP 2854
+ +A L +SF G TGV L K+ KGK L +P+ +V T FGFAGSGKS++
Sbjct: 883 DKSKADRLAQSFYNGNTGVLLGKYNKGKMHAEWLEEPK-----EVLTAFGFAGSGKSHWC 937
Query: 2853 QTLLNGGAYNDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKRFKNIVVDEIGLLP 2674
QT+L A LVI PRK L DW +K+ K VVTFE AF + K+IV+DEIGLLP
Sbjct: 938 QTILKHCAVEKVLVISPRKVLKDDWTSKISKKHKVVTFEVAFMDDYGCKDIVIDEIGLLP 997
Query: 2673 HGYLDMLCGAFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHRL 2494
GY+D++ + L++LGDPLQ Y++K D++ L +E +F G YL +HRL
Sbjct: 998 PGYIDLVIAVHRPRVLVLLGDPLQSTYHSKRDNVVLEASQEDIFSRVQGNLPYLCYSHRL 1057
Query: 2493 PSNQTIFEIPSHGEKSDKYITM-NEKVGNDQKITASRKRKEIEGSRANTIGECQGLSLQR 2317
P N +FE+ G + +K + + ++ ++ I A+R KE +GS T+ E QGLS +
Sbjct: 1058 PKNCKVFELECMGAECEKRVVYRSNRLKDEPVICATRAMKEEKGSGWCTVSETQGLSFKS 1117
Query: 2316 VNLMLDEDWALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVNK 2137
+ LDE W DE MVALTR+R +I + V LK L+ AKS++L+ L G+ +
Sbjct: 1118 CLIYLDEHWGKKEDEDVMVALTRSRGEIGIHVSPALKKTLISTAKSTLLKKVLKGETYRR 1177
Query: 2136 NSLVNILSTHLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXETS 1957
+ +V ++ H+ +V ++ EE RL +T D E RLAGDPYLK E
Sbjct: 1178 SEIVAMVKKHIPEVTVMFEESRLAETVDYEARLAGDPYLKSLLSLYDEIEMDEIEMEEPV 1237
Query: 1956 VQTPQRTHLWLSDGSNNVSISELKAKEHREAYTEAGITDQINEEGYKNSTADPMTHKALY 1777
V P +THL LS+ N ++ +LKAKEHRE YTEAG T+QI+EEGYK A+PMTHKALY
Sbjct: 1238 VLEPIKTHLALSEKLNELAPFDLKAKEHREQYTEAGRTEQIDEEGYKGENANPMTHKALY 1297
Query: 1776 LHHKNADVATFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPDTLPDL 1597
H + D ATF++SV+KRLRFR+ E NRRKY C G G Q+F + KE YQL + D+LP+L
Sbjct: 1298 QRHTSDDTATFLMSVKKRLRFRNYEANRRKYKACHGIGQQMFSVFKEIYQLKEIDSLPEL 1357
Query: 1596 SRVETEFTKKRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAKAGQTI 1417
R E EF KKR+ KS LIE+H+ RSDPDWPSNYL+IFLKQQ CTKMEKRGVDAKAGQTI
Sbjct: 1358 ERCEMEFMKKRVEKSAGLIEQHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTI 1417
Query: 1416 ACFSHAVLCKFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGTDSDYE 1237
ACF+H+VLC+FG LR+TE+ALR L +NVMIYSQKNY DLD W+R +V+ M GTDSDYE
Sbjct: 1418 ACFAHSVLCRFGPILRQTERALRELLPENVMIYSQKNYMDLDKWARTWVEGMTGTDSDYE 1477
Query: 1236 AFDRSQDEKILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFGTFFFN 1057
AFDRSQDEK+L EVEVL+FFLWPE+LI EY ELKLMMGCS+GDLA+MRFSGEFGTFFFN
Sbjct: 1478 AFDRSQDEKVLDLEVEVLRFFLWPEDLIREYEELKLMMGCSLGDLAVMRFSGEFGTFFFN 1537
Query: 1056 TVCNMAFTCLRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVSESPLF 877
TVCNM FTC+RY + ++TP+C+AGDDMYSPGVL +K YE L++L LKAKV++S+ PLF
Sbjct: 1538 TVCNMVFTCMRYHIDRNTPVCFAGDDMYSPGVLRVKRDYEGTLEQLTLKAKVHISDEPLF 1597
Query: 876 CGWRMTPYGIVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVNIDIDA 697
CGWRM+P+GIVK+PNL+LDRWK+A+ +G L C NYA+EA +GYRL EHLYD+NID+DA
Sbjct: 1598 CGWRMSPFGIVKEPNLILDRWKMAKRNGDLSLCLVNYAIEASFGYRLSEHLYDINIDVDA 1657
Query: 696 QQELVRRIVRVKDQLPKGIGRLYSSDPNECHSDGEELTIRVSAEAEY 556
QQELVR IV K LPK I L+S D E HSDG+E +R Y
Sbjct: 1658 QQELVREIVEKKHLLPKKIADLFSDDECEAHSDGDEDFLRKDVAGLY 1704
>gb|ABL14358.1| 194 kDa protein [Grapevine virus A]
Length = 1707
Score = 1045 bits (2701), Expect = 0.0
Identities = 537/1056 (50%), Positives = 708/1056 (67%), Gaps = 9/1056 (0%)
Frame = -3
Query: 3729 DEDFDHCLLQVYRENAGIGYHADDEPCY-KNNAVVTVNLSGTCQFHISCK-GEKVFELK- 3559
DE +DHCL+Q Y + IG+HADDE CY +VVT+NL G F + K+ E+K
Sbjct: 643 DESYDHCLIQRYTKGGSIGFHADDERCYLPGGSVVTLNLHGDAIFEVKENVSGKIQEIKL 702
Query: 3558 -DGDVLTMPEGCQHDHKHKVDCTSAGRISLTFRNGITEPDMGSD-AYTEYSEEEPDLESS 3385
DGDV TM G Q HKH+V + GR S+T RN T+ + + + +EY E+ +L+
Sbjct: 703 ADGDVYTMGPGMQQTHKHRVVSCTEGRCSVTLRNKTTDHETRLEGSNSEYEEDVAELDEG 762
Query: 3384 MEILRKNGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKEL 3205
+E L+KN N+C + ++HM ++ +SI+N P+ + E++ GG+SV TL+ + K L
Sbjct: 763 IEYLKKNSGNMCSLKAFADHMQLSIPSVISIVNGASPQTLREIESGGISVATLVNLSKAL 822
Query: 3204 DIPLYLQNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFEY 3025
D P+ + RG G ++++ H+E F G +G F EAL + + F
Sbjct: 823 DFPVSIHGERGYAETTGDYRKLHLRITAGHVEPFEGVSSKGGFKEALLLSDGIGIGRFRV 882
Query: 3024 NAKRAKLLIESFQEGFTGVCLNKFQKGK---GALGDPEGVGQVQVYTLFGFAGSGKSYYP 2854
+ +A L +SF G TGV L K+ KGK L +P+ +V T FGFAGSGKS++
Sbjct: 883 DKAKADRLAQSFYNGNTGVLLGKYNKGKMHAEGLEEPK-----EVLTAFGFAGSGKSHWC 937
Query: 2853 QTLLNGGAYNDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKRFKNIVVDEIGLLP 2674
QT+L + LVI PRK L DW +K+ K VVTFE AF + K+IV+DEIGLLP
Sbjct: 938 QTILKHCTVDKVLVISPRKVLKDDWTSKISKKHKVVTFEVAFMDDYGCKDIVIDEIGLLP 997
Query: 2673 HGYLDMLCGAFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHRL 2494
GY+D++ + L++LGDPLQ Y++K D++ L +E +F G+ YL +HRL
Sbjct: 998 PGYIDLIIAVHRPRVLVLLGDPLQSTYHSKRDNMVLEASQEDIFSRVHGKLPYLCYSHRL 1057
Query: 2493 PSNQTIFEIPSHGEKSDKYITM-NEKVGNDQKITASRKRKEIEGSRANTIGECQGLSLQR 2317
P N +FE+ G +S+K + + ++ ++ I A+R KE +GS T+ E QGLS +
Sbjct: 1058 PKNCKLFELECMGAESEKRVVYRSNRMKDEPVICATRAMKEEKGSGWYTVSETQGLSFKS 1117
Query: 2316 VNLMLDEDWALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVNK 2137
+ LDE W DE MVALTR+R +I + V L+ L+ AKS +LR L G+ +
Sbjct: 1118 CLIYLDEHWGKKEDEDIMVALTRSRGEIGIHVSPTLRKSLISSAKSMLLRKVLKGETYRR 1177
Query: 2136 NSLVNILSTHLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXETS 1957
+ +V + H+ +V ++ EE RL T D E RLAGDPYLK E +
Sbjct: 1178 SEVVAMAKKHIPEVTVMFEESRLAQTVDYEARLAGDPYLKSLLSLYDEIEMEEVEVEEPT 1237
Query: 1956 VQTPQRTHLWLSDGSNNVSISELKAKEHREAYTEAGITDQINEEGYKNSTADPMTHKALY 1777
P +THL LS+ N ++ +LKAKE+RE YT+ G T+QI+E GY +A+PMTHKALY
Sbjct: 1238 ALEPMKTHLALSEKLNELAPFDLKAKEYREQYTDVGRTEQIDEVGYSEESANPMTHKALY 1297
Query: 1776 LHHKNADVATFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPDTLPDL 1597
L H + D ATFM+SV+KRLRFR+ E NRRKY C G G Q+F + K+TYQL + D+LP+L
Sbjct: 1298 LRHTSDDTATFMMSVKKRLRFRNFEANRRKYRACHGIGQQMFSVFKDTYQLKEIDSLPEL 1357
Query: 1596 SRVETEFTKKRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAKAGQTI 1417
R E EF KKR+ KS LIE+H+ RSDPDWPSNYL+IFLKQQ CTKMEKRGVDAKAGQTI
Sbjct: 1358 ERCEMEFMKKRVEKSAGLIEQHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTI 1417
Query: 1416 ACFSHAVLCKFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGTDSDYE 1237
ACF+H+VLC+FG LR+TE+ALR L +NVMIYSQKNY DLD W+R +V+ M GTDSDYE
Sbjct: 1418 ACFAHSVLCRFGPILRQTERALRELLPENVMIYSQKNYMDLDKWARTWVESMTGTDSDYE 1477
Query: 1236 AFDRSQDEKILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFGTFFFN 1057
AFDRSQDEK+L EVEVL+FFLWPEELI EY ELKLMMGCS+GDLA+MRFSGEFGTFFFN
Sbjct: 1478 AFDRSQDEKVLDLEVEVLRFFLWPEELIKEYEELKLMMGCSLGDLAVMRFSGEFGTFFFN 1537
Query: 1056 TVCNMAFTCLRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVSESPLF 877
T+CNM FTC+RY + ++TPIC+AGDDMYSPGVL +K YE L++L LKAKV++SE PLF
Sbjct: 1538 TMCNMVFTCMRYHIDRNTPICFAGDDMYSPGVLRVKKDYEGTLEQLTLKAKVHISEEPLF 1597
Query: 876 CGWRMTPYGIVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVNIDIDA 697
CGWRM+P+GIVK+PNL+LDRWKIA+ G L C NYA+EA +GYRL EHLYD+NID+DA
Sbjct: 1598 CGWRMSPFGIVKEPNLILDRWKIAKRSGSLSLCLVNYAIEASFGYRLSEHLYDINIDVDA 1657
Query: 696 QQELVRRIVRVKDQLPKGIGRLYSSDPNECHSDGEE 589
QQEL+R +V+ K LPK I L+S D E HSDG+E
Sbjct: 1658 QQELIREVVKKKHLLPKKIADLFSDDECEAHSDGDE 1693
>gb|ABH06988.2| 194 kDa protein [Grapevine virus A]
Length = 1707
Score = 1043 bits (2698), Expect = 0.0
Identities = 539/1056 (51%), Positives = 709/1056 (67%), Gaps = 9/1056 (0%)
Frame = -3
Query: 3729 DEDFDHCLLQVYRENAGIGYHADDEPCY-KNNAVVTVNLSGTCQFHI--SCKGE-KVFEL 3562
DE +DHCL+Q Y + IG+HADDE CY +VVT+NL G F + + G+ + ++
Sbjct: 643 DESYDHCLIQRYSKGGSIGFHADDERCYLPGGSVVTLNLHGEAIFEVKENATGKIQQIKM 702
Query: 3561 KDGDVLTMPEGCQHDHKHKVDCTSAGRISLTFRNGITEPDMGSDAY-TEYSEEEPDLESS 3385
+DGDV TM G Q HKH+V + GR S+T RN T+ + + +EY E+ +L+
Sbjct: 703 RDGDVYTMGPGMQQTHKHRVVSCTEGRCSVTLRNKTTDYETRLEGNNSEYEEDVAELDEG 762
Query: 3384 MEILRKNGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKEL 3205
+E L+KN N+C + ++HM ++ +SI+N P+ + E++ GG+SV TL+ + K L
Sbjct: 763 IEYLQKNSGNMCSLKAFADHMQLSIPSVISIVNGASPQTLREIESGGISVATLVNLSKAL 822
Query: 3204 DIPLYLQNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFEY 3025
D P+ + + RG G ++++ H+E F G +G F EAL + + F
Sbjct: 823 DFPVAIHSERGYAETVGDYRKLHLKITAGHVEPFDGVNSKGGFKEALLLSDGIGIGRFRV 882
Query: 3024 NAKRAKLLIESFQEGFTGVCLNKFQKGKGA---LGDPEGVGQVQVYTLFGFAGSGKSYYP 2854
+ +A L SF G TGV L K+ KGK L +P+ +V T FGFAGSGKS++
Sbjct: 883 DKNKADRLARSFYNGNTGVLLGKYNKGKMHAEWLEEPK-----EVLTAFGFAGSGKSHWC 937
Query: 2853 QTLLNGGAYNDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKRFKNIVVDEIGLLP 2674
QT+L A LVI PRK L DW +K+ K VVTFE AF + K+IV+DEIGLLP
Sbjct: 938 QTILKHCAVEKVLVISPRKVLKDDWTSKISKKHKVVTFEVAFMDDYGCKDIVIDEIGLLP 997
Query: 2673 HGYLDMLCGAFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHRL 2494
GY+D++ + L++LGDPLQ Y++K D++ L +E +F G YL +HRL
Sbjct: 998 PGYIDLVIAVHRPRVLVLLGDPLQSTYHSKRDNVVLEASQEDIFSRVQGNLPYLCYSHRL 1057
Query: 2493 PSNQTIFEIPSHGEKSDKYITM-NEKVGNDQKITASRKRKEIEGSRANTIGECQGLSLQR 2317
P N +FE+ G + DK + + ++ ++ I A+R KE +GS T+ E QGLS +
Sbjct: 1058 PKNCKVFELECMGAECDKRVVYRSNRLKDEPVICATRAMKEEKGSGWYTVSETQGLSFKS 1117
Query: 2316 VNLMLDEDWALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVNK 2137
+ LDE W DE MVALTR+R +I + V LK L+ AKS++L+ L G+ +
Sbjct: 1118 CLIYLDEHWGKKEDEDVMVALTRSRGEIGIHVSPALKKTLMSSAKSTLLKKVLKGETYRR 1177
Query: 2136 NSLVNILSTHLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXETS 1957
+ +V + H+ +V ++ EE RL +T D E RLAGDPYLK E
Sbjct: 1178 SEIVAMTKKHIPEVVVMFEESRLAETVDYEARLAGDPYLKSLLSLYDEIEMDEVEMEEPV 1237
Query: 1956 VQTPQRTHLWLSDGSNNVSISELKAKEHREAYTEAGITDQINEEGYKNSTADPMTHKALY 1777
P +THL LS+ N ++ +LKAKE+RE YTEAG T+QI+EEGYK A+PMTHKALY
Sbjct: 1238 ALEPIKTHLALSEKLNELAPFDLKAKEYREQYTEAGRTEQIDEEGYKGENANPMTHKALY 1297
Query: 1776 LHHKNADVATFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPDTLPDL 1597
L H + D ATFM+SV+KRLRFR+ E NRRKY C G G Q+F + KE YQL + D+LP+L
Sbjct: 1298 LRHTSDDTATFMMSVKKRLRFRNFEANRRKYRACHGIGQQMFSVFKEIYQLKEIDSLPEL 1357
Query: 1596 SRVETEFTKKRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAKAGQTI 1417
R E EF KKR+ KS LIE+H+ RSDPDWPSNYL+IFLKQQ CTKMEKRGVDAKAGQTI
Sbjct: 1358 ERCEMEFMKKRVEKSAGLIEQHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTI 1417
Query: 1416 ACFSHAVLCKFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGTDSDYE 1237
ACF+H+VLC+FG LR+TE+ALR L +NVMIYSQKNY DLD W+R +V+ M GTDSDYE
Sbjct: 1418 ACFAHSVLCRFGPILRQTERALRELLPENVMIYSQKNYMDLDKWARTWVEGMTGTDSDYE 1477
Query: 1236 AFDRSQDEKILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFGTFFFN 1057
AFDRSQDEK+L EVEVL+FFLWPE+LI EY ELKLMMGCS+GDLA+MRFSGEFGTFFFN
Sbjct: 1478 AFDRSQDEKVLDLEVEVLRFFLWPEDLIREYEELKLMMGCSLGDLAVMRFSGEFGTFFFN 1537
Query: 1056 TVCNMAFTCLRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVSESPLF 877
TVCNM FTC+RY + ++TP+C+AGDDMYSPG+L +K YE L++L LKAKV++SE PLF
Sbjct: 1538 TVCNMVFTCMRYHIDRNTPVCFAGDDMYSPGILRVKRDYEGTLEQLTLKAKVHISEEPLF 1597
Query: 876 CGWRMTPYGIVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVNIDIDA 697
CGWRM+P+GIVK+PNL+LDRWK+A+ +G L C NYA+EA +GYRL EHLYD+NID+DA
Sbjct: 1598 CGWRMSPFGIVKEPNLILDRWKMAKRNGDLSLCLVNYAIEASFGYRLSEHLYDINIDVDA 1657
Query: 696 QQELVRRIVRVKDQLPKGIGRLYSSDPNECHSDGEE 589
QQELVR IV K LPK I L+S D E HSDG+E
Sbjct: 1658 QQELVREIVEKKHLLPKKIADLFSDDECEAHSDGDE 1693
>gb|ACA52189.1| 194 kDa protein [Grapevine virus A]
Length = 1707
Score = 1042 bits (2694), Expect = 0.0
Identities = 539/1056 (51%), Positives = 707/1056 (66%), Gaps = 9/1056 (0%)
Frame = -3
Query: 3729 DEDFDHCLLQVYRENAGIGYHADDEPCY-KNNAVVTVNLSGTCQFHI--SCKGE-KVFEL 3562
DE +DHCL+Q Y + IG+HADDE CY +VVT+NL G F + + G+ K +L
Sbjct: 643 DESYDHCLIQRYSKGGSIGFHADDERCYLPGGSVVTLNLHGEAIFEVKENTTGKIKKIKL 702
Query: 3561 KDGDVLTMPEGCQHDHKHKVDCTSAGRISLTFRNGITEPDMGSDAY-TEYSEEEPDLESS 3385
DGDV TM G Q HKH+V+ + GR S+T RN + + + +EY E+ +L+
Sbjct: 703 GDGDVYTMGPGMQQSHKHRVESCTEGRCSVTLRNKTIDYETRQEGNNSEYEEDVAELDEG 762
Query: 3384 MEILRKNGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKEL 3205
+E L+KN N+C + ++HM ++ +SI+N P+ + E++ GG+SV TL+ + K L
Sbjct: 763 IEYLKKNSGNMCSLKAFADHMQLSIPSVISIVNGVSPQTLREIESGGISVATLVNLSKAL 822
Query: 3204 DIPLYLQNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFEY 3025
D P+ + RG G ++++ H+E F G G F EAL + + F
Sbjct: 823 DFPVAIHGERGYAETTGDYRKLHLKITAGHVEPFEGVNSRGGFKEALLLSDGIGIGRFRV 882
Query: 3024 NAKRAKLLIESFQEGFTGVCLNKFQKGK---GALGDPEGVGQVQVYTLFGFAGSGKSYYP 2854
+ +A L +SF G TGV L K+ KGK L +P+ +V T FGFAGSGKS++
Sbjct: 883 DKSKADRLAQSFHNGNTGVLLGKYNKGKIHAEWLDEPK-----EVLTAFGFAGSGKSHWC 937
Query: 2853 QTLLNGGAYNDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKRFKNIVVDEIGLLP 2674
QT+L A LVI PRK L DW +K+ K+ VVTFE AF + K+IV+DEIGLLP
Sbjct: 938 QTILKHCAVEKVLVISPRKVLKDDWTSKISKEHKVVTFEVAFMDDFGCKDIVIDEIGLLP 997
Query: 2673 HGYLDMLCGAFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHRL 2494
GY+D++ + L++LGDPLQ Y++K D++ L +E VF G YL +HRL
Sbjct: 998 PGYIDLVIAVHRSRVLVLLGDPLQSTYHSKRDNVVLEASQEDVFSRVQGNLPYLCYSHRL 1057
Query: 2493 PSNQTIFEIPSHGEKSDKYITM-NEKVGNDQKITASRKRKEIEGSRANTIGECQGLSLQR 2317
P N +FE+ G + +K + + ++ ++ I A+R KE +GS T+ E QGLS +
Sbjct: 1058 PKNCKLFELECMGAECEKRVVYRSNRLKDEPVICATRAMKEEKGSGWYTVSETQGLSFKS 1117
Query: 2316 VNLMLDEDWALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVNK 2137
+ LDE WA DE MVALTR+R +I + LK L+ AKS++LR L G+ +
Sbjct: 1118 CLIYLDEHWAKKEDEDVMVALTRSRGEIGIHASPALKKSLISTAKSTLLRKVLKGETYRR 1177
Query: 2136 NSLVNILSTHLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXETS 1957
+ +V + H+ +V ++ EE RL +T D E RLAGDPYLK E +
Sbjct: 1178 SEIVAMARKHIPEVTVMFEESRLAETVDYEARLAGDPYLKSLLSLYDEIEMEEVEIEEPT 1237
Query: 1956 VQTPQRTHLWLSDGSNNVSISELKAKEHREAYTEAGITDQINEEGYKNSTADPMTHKALY 1777
P +THL LS+ N ++ +LKAKE+RE YTEAG T+QI+EEGYK A+PMTHKALY
Sbjct: 1238 ALEPVKTHLALSEKLNELAPFDLKAKEYREQYTEAGRTEQIDEEGYKGENANPMTHKALY 1297
Query: 1776 LHHKNADVATFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPDTLPDL 1597
L H + D ATFM+SV+KRLRFR+ E NRRKY C G G Q+F + KE YQL + D+LP+L
Sbjct: 1298 LRHTSDDTATFMMSVKKRLRFRNFEANRRKYKACHGIGQQMFSVFKEIYQLKEIDSLPEL 1357
Query: 1596 SRVETEFTKKRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAKAGQTI 1417
R E EF KKR+ KS LIE+H+ RSDPDWPSNYL+IFLKQQ CTKMEKRGVDAKAGQTI
Sbjct: 1358 ERCEMEFMKKRVEKSAGLIEQHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTI 1417
Query: 1416 ACFSHAVLCKFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGTDSDYE 1237
A F+H+VLC+FG LR+TE+ALR L +NVMIYSQKNY DLD W+R +V+ M GTDSDYE
Sbjct: 1418 ARFAHSVLCRFGPILRQTERALRELLPENVMIYSQKNYMDLDKWARTWVESMTGTDSDYE 1477
Query: 1236 AFDRSQDEKILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFGTFFFN 1057
AFDRSQDEK+L EVEVL+FFLWPE+LI EY ELKLMMGCS+GDL +MRFSGEFGTFFFN
Sbjct: 1478 AFDRSQDEKVLDLEVEVLRFFLWPEDLIREYEELKLMMGCSLGDLGVMRFSGEFGTFFFN 1537
Query: 1056 TVCNMAFTCLRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVSESPLF 877
TVCNM FTC+RY + ++TP+C+AGDDMYSPG+L IK YE L++L LKAKV++SE PLF
Sbjct: 1538 TVCNMVFTCMRYHIDRNTPVCFAGDDMYSPGILRIKKDYEGTLEQLTLKAKVHISEEPLF 1597
Query: 876 CGWRMTPYGIVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVNIDIDA 697
CGWRM+P+GIVK+PNL+LDRWK+A+ +G L C NYA+EA +GYRL EHLYD+NID+DA
Sbjct: 1598 CGWRMSPFGIVKEPNLILDRWKMAKRNGDLSLCLVNYAIEASFGYRLSEHLYDINIDVDA 1657
Query: 696 QQELVRRIVRVKDQLPKGIGRLYSSDPNECHSDGEE 589
QQELVR IV K LPK I L+S D E +SDG+E
Sbjct: 1658 QQELVREIVEKKHLLPKKIADLFSDDECEAYSDGDE 1693
>ref|YP_006590065.1| replicase [Grapevine virus F] gi|401620150|gb|AFP95341.1| replicase
[Grapevine virus F]
Length = 1727
Score = 1024 bits (2648), Expect = 0.0
Identities = 540/1068 (50%), Positives = 701/1068 (65%), Gaps = 16/1068 (1%)
Frame = -3
Query: 3726 EDFDHCLLQVYRENAGIGYHADDEPCY-KNNAVVTVNLSGTCQFHISCKGEKVFE---LK 3559
E++DHCL+Q Y ++ I +HADDE CY + VVT+N+ GT +F + G++ L+
Sbjct: 654 EEYDHCLVQKYEKDGAIPFHADDEKCYLPGSCVVTLNMHGTAEFMLKENGKEEVHRVTLE 713
Query: 3558 DGDVLTMPEGCQHDHKHKVDCTSAGRISLTFRNGITEPDMGSDAYTEYSEEEPDLESSME 3379
DGDVL MPEG Q ++KH V S GRISLTFRN T M SDA ++Y E+ PD++ +
Sbjct: 714 DGDVLVMPEGVQENYKHSVLVKSEGRISLTFRNK-TVDYMNSDAVSDYEEDAPDVDDGLR 772
Query: 3378 ILRKNGKNLCCIDRISEHMGVAREICVSIINSKRPRAIEELKDGGMSVGTLLVILKELDI 3199
++ N NLC + I++H+ + I V+ +N+ P I EL GG ++ T + + ++DI
Sbjct: 773 SIQANRANLCTLQCIADHIKLDLPILVARLNATNPEYISELSKGGPTLPTFINLCAKMDI 832
Query: 3198 PLYLQNNRGCIRQPGSFKEMSCIANDNHLEFFLGPKMEGTFSEALNFNPDVSSCYFEYNA 3019
PL + G ++ G+FK++ ++H+E +A + +P+ F N
Sbjct: 833 PLQISGVHGGLQTRGNFKKLCVFMGEDHVERVEETVGRNNAYDAFSLHPNSGRGTFYPNR 892
Query: 3018 KRAKLLIESFQEGFTGVCLNKFQKGKGALGDPEGVGQVQVYTLFGFAGSGKSYYPQTLLN 2839
+ A+ L ES EG TG+ LNKF++GK + D +++ + FGFAGSGKSYYPQT+L
Sbjct: 893 EYAEKLSESMFEGHTGILLNKFKRGKSVIKDVRK--EIKFVSFFGFAGSGKSYYPQTVLQ 950
Query: 2838 GGAYNDTLVIVPRKALCLDWKNKVHKDVAVVTFEKAFKGEKRFKNIVVDEIGLLPHGYLD 2659
LVI PRKAL DW +K+ VVTFEKA E+ F IVVDE+GL P GYLD
Sbjct: 951 HTFGIRALVISPRKALAADWSSKIGSRAKVVTFEKAVVEEEVFSCIVVDELGLYPPGYLD 1010
Query: 2658 MLCGAFQFETLLVLGDPLQCGYYNKNDDLFLAPIRESVFKNFIGQKSYLGKTHRLPSNQT 2479
++C + TL++LGDPLQ YYNK+D + LA + +VF G YL +HRL +
Sbjct: 1011 LICLLHEPSTLVLLGDPLQGTYYNKDDRIKLATVSHNVFARLEGSLPYLMYSHRLSKSNR 1070
Query: 2478 IFEIPSHGEKSDKYITMNEKVGNDQK-ITASRKRKEIEGSRANTIGECQGLSLQRVNLML 2302
F+I +HG +K+ I A+R KE A T+ E QGLS + V +++
Sbjct: 1071 TFDIDTHGNLESAGSQRVKKLDTKMPTIYAARATKESAEGTAYTVSETQGLSFKDVQVLI 1130
Query: 2301 DEDWALISDESAMVALTRARRQINVCVDEKLKNKLVKHAKSSVLRSFLLGQRVNKNSLVN 2122
D+DWAL D +VA TRAR + + L AKS VLRS L +V +++++N
Sbjct: 1131 DKDWALKEDGDVIVAFTRARGTTKYMCSDSDMDMLKARAKSEVLRSILRAGKVGRDTILN 1190
Query: 2121 ILSTHLSDVELVTEEMRLGDTDDMEERLAGDPYLKXXXXXXXXXXXXXXXXXETSVQTPQ 1942
L + + E V E RL +T++ EE+L GDPYLK E P
Sbjct: 1191 SLRKEMPNAEPVFTEARLANTEEYEEKLMGDPYLKGMLRLLQEEEIEEEECEEPMAPEPV 1250
Query: 1941 RTHLWLSDGSN--------NVSISELKAKE--HREAYTEAGITDQINEEGYKNSTADPMT 1792
+THL+LS+G N N S +K + +RE T AG+T QI+E GY +P T
Sbjct: 1251 KTHLFLSEGVNEMAPFMFVNQSGQRVKLGDRFNREQKTTAGLTAQIDEMGYAGQNENPCT 1310
Query: 1791 HKALYLHHKNADVATFMLSVRKRLRFRDPEKNRRKYNKCGGFGAQLFKIMKETYQLVQPD 1612
HKALYLHHK ATFMLSVRKRLRFRDPEKNR +Y K G G Q+F ++K+TY D
Sbjct: 1311 HKALYLHHKMDXAATFMLSVRKRLRFRDPEKNRARYEKHKGIGRQMFDVLKKTYHWTSID 1370
Query: 1611 TLPDLSRVETEFTKKRLAKSQKLIEKHSYRSDPDWPSNYLRIFLKQQVCTKMEKRGVDAK 1432
+LP L + E +F KKRL KS L+E+H+ RSDPDWPSN ++IFLKQQVCTK+EKRGVDAK
Sbjct: 1371 SLPPLEKAEADFMKKRLNKSAALLERHNIRSDPDWPSNIIKIFLKQQVCTKLEKRGVDAK 1430
Query: 1431 AGQTIACFSHAVLCKFGVQLRRTEKALRAQLQDNVMIYSQKNYTDLDNWSRRYVDYMIGT 1252
AGQTIACFSHAVLCKFG +R+TE+ LR L NVMIYSQKNY+DLD W++ YVD M+GT
Sbjct: 1431 AGQTIACFSHAVLCKFGPIMRQTERKLRELLPPNVMIYSQKNYSDLDVWAKTYVDTMVGT 1490
Query: 1251 DSDYEAFDRSQDEKILSFEVEVLKFFLWPEELINEYVELKLMMGCSMGDLAIMRFSGEFG 1072
DSDYEAFDRSQDEKIL EVEVLKFFLWPEELI EYVELKL M CSMG+LAIMRFSGEFG
Sbjct: 1491 DSDYEAFDRSQDEKILDLEVEVLKFFLWPEELIREYVELKLQMSCSMGNLAIMRFSGEFG 1550
Query: 1071 TFFFNTVCNMAFTCLRYSLTKDTPICYAGDDMYSPGVLPIKNTYEHVLKELQLKAKVNVS 892
TFFFNT+CNM FTC+RY++T T +C+AGDDMY+PGVL ++ YEH+L EL LKAKV V
Sbjct: 1551 TFFFNTMCNMVFTCMRYNVTDKTRLCFAGDDMYAPGVLEVRTDYEHILDELSLKAKVQVG 1610
Query: 891 ESPLFCGWRMTPYGIVKDPNLLLDRWKIAEMDGRLKDCQANYALEAIYGYRLGEHLYDVN 712
+ PLFCGWRM+PYGIVK+PNL+LDRWKIA+ +G L DC NYA+EA YGYRL E+LYD+N
Sbjct: 1611 DRPLFCGWRMSPYGIVKEPNLVLDRWKIAKGNGSLHDCMVNYAIEASYGYRLSEYLYDIN 1670
Query: 711 IDIDAQQELVRRIVRVKDQLPKGIGRLYSSDPNECHSDG-EELTIRVS 571
IDIDAQQEL R+IV VKD+LP + ++S D NE SDG +E I++S
Sbjct: 1671 IDIDAQQELTRQIVLVKDKLPPKVSSIFSDDANESWSDGDDEFLIKLS 1718