BLASTX nr result
ID: Mentha24_contig00015390
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00015390
(397 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU37971.1| hypothetical protein MIMGU_mgv1a003198mg [Mimulus... 107 2e-21
ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi... 101 9e-20
emb|CBI37850.3| unnamed protein product [Vitis vinifera] 101 9e-20
ref|XP_002306193.2| hypothetical protein POPTR_0004s18320g [Popu... 100 3e-19
ref|XP_002516388.1| splicing factor, putative [Ricinus communis]... 100 4e-19
ref|XP_006486689.1| PREDICTED: RNA-binding protein 39-like isofo... 99 5e-19
ref|XP_006486688.1| PREDICTED: RNA-binding protein 39-like isofo... 99 5e-19
ref|XP_006486687.1| PREDICTED: RNA-binding protein 39-like isofo... 99 5e-19
ref|XP_006486686.1| PREDICTED: RNA-binding protein 39-like isofo... 99 5e-19
ref|XP_006486685.1| PREDICTED: RNA-binding protein 39-like isofo... 99 5e-19
ref|XP_006422532.1| hypothetical protein CICLE_v10027985mg [Citr... 99 5e-19
ref|XP_006422531.1| hypothetical protein CICLE_v10027985mg [Citr... 99 5e-19
ref|XP_002312948.2| hypothetical protein POPTR_0009s13940g [Popu... 97 2e-18
ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidops... 97 2e-18
ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidops... 97 2e-18
ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arab... 97 2e-18
gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana] 97 2e-18
gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana] 97 2e-18
ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis ... 97 2e-18
ref|XP_006589727.1| PREDICTED: RNA-binding protein 39-like isofo... 96 4e-18
>gb|EYU37971.1| hypothetical protein MIMGU_mgv1a003198mg [Mimulus guttatus]
Length = 600
Score = 107 bits (266), Expect = 2e-21
Identities = 48/57 (84%), Positives = 54/57 (94%)
Frame = +3
Query: 3 RLKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFP 173
RLKHIYVEKNSAGFVYLRFEN +AA++AQ ALHGRWFAGKMITAT+M+H DYEA+FP
Sbjct: 541 RLKHIYVEKNSAGFVYLRFENTEAAMAAQRALHGRWFAGKMITATYMLHQDYEARFP 597
>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
Length = 609
Score = 101 bits (252), Expect = 9e-20
Identities = 47/58 (81%), Positives = 53/58 (91%)
Frame = +3
Query: 6 LKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFPST 179
+KHIYV+KNSAGFV+LRFEN QAAISAQ ALHGRWFAGKMITATFM+ +YEAKFP +
Sbjct: 551 VKHIYVDKNSAGFVFLRFENTQAAISAQRALHGRWFAGKMITATFMLPQNYEAKFPDS 608
>emb|CBI37850.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 101 bits (252), Expect = 9e-20
Identities = 47/58 (81%), Positives = 53/58 (91%)
Frame = +3
Query: 6 LKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFPST 179
+KHIYV+KNSAGFV+LRFEN QAAISAQ ALHGRWFAGKMITATFM+ +YEAKFP +
Sbjct: 369 VKHIYVDKNSAGFVFLRFENTQAAISAQRALHGRWFAGKMITATFMLPQNYEAKFPDS 426
>ref|XP_002306193.2| hypothetical protein POPTR_0004s18320g [Populus trichocarpa]
gi|550341316|gb|EEE86704.2| hypothetical protein
POPTR_0004s18320g [Populus trichocarpa]
Length = 609
Score = 100 bits (248), Expect = 3e-19
Identities = 46/58 (79%), Positives = 52/58 (89%)
Frame = +3
Query: 6 LKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFPST 179
+KHIYV+KNSAGFVY+RFEN QAAI+AQ ALHGRWFAGK+ITATFMV YEAKFP +
Sbjct: 551 VKHIYVDKNSAGFVYMRFENMQAAINAQHALHGRWFAGKLITATFMVPQTYEAKFPDS 608
>ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative
[Ricinus communis]
Length = 609
Score = 99.8 bits (247), Expect = 4e-19
Identities = 47/58 (81%), Positives = 51/58 (87%)
Frame = +3
Query: 6 LKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFPST 179
L+HIYV+KNSAGFVYLRFEN Q+AISAQ ALHGRWFAGKMITATFMV YE KFP +
Sbjct: 551 LQHIYVDKNSAGFVYLRFENTQSAISAQRALHGRWFAGKMITATFMVPQVYETKFPDS 608
>ref|XP_006486689.1| PREDICTED: RNA-binding protein 39-like isoform X5 [Citrus sinensis]
Length = 639
Score = 99.4 bits (246), Expect = 5e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +3
Query: 3 RLKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFPST 179
+LKHI+VEK+SAGFVYLRFEN Q+A +AQ ALHGRWFAGKMITATFMV YEAKFP +
Sbjct: 580 KLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
>ref|XP_006486688.1| PREDICTED: RNA-binding protein 39-like isoform X4 [Citrus sinensis]
Length = 647
Score = 99.4 bits (246), Expect = 5e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +3
Query: 3 RLKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFPST 179
+LKHI+VEK+SAGFVYLRFEN Q+A +AQ ALHGRWFAGKMITATFMV YEAKFP +
Sbjct: 588 KLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 646
>ref|XP_006486687.1| PREDICTED: RNA-binding protein 39-like isoform X3 [Citrus sinensis]
Length = 658
Score = 99.4 bits (246), Expect = 5e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +3
Query: 3 RLKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFPST 179
+LKHI+VEK+SAGFVYLRFEN Q+A +AQ ALHGRWFAGKMITATFMV YEAKFP +
Sbjct: 599 KLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 657
>ref|XP_006486686.1| PREDICTED: RNA-binding protein 39-like isoform X2 [Citrus sinensis]
Length = 661
Score = 99.4 bits (246), Expect = 5e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +3
Query: 3 RLKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFPST 179
+LKHI+VEK+SAGFVYLRFEN Q+A +AQ ALHGRWFAGKMITATFMV YEAKFP +
Sbjct: 602 KLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 660
>ref|XP_006486685.1| PREDICTED: RNA-binding protein 39-like isoform X1 [Citrus sinensis]
Length = 669
Score = 99.4 bits (246), Expect = 5e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +3
Query: 3 RLKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFPST 179
+LKHI+VEK+SAGFVYLRFEN Q+A +AQ ALHGRWFAGKMITATFMV YEAKFP +
Sbjct: 610 KLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 668
>ref|XP_006422532.1| hypothetical protein CICLE_v10027985mg [Citrus clementina]
gi|557524466|gb|ESR35772.1| hypothetical protein
CICLE_v10027985mg [Citrus clementina]
Length = 639
Score = 99.4 bits (246), Expect = 5e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +3
Query: 3 RLKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFPST 179
+LKHI+VEK+SAGFVYLRFEN Q+A +AQ ALHGRWFAGKMITATFMV YEAKFP +
Sbjct: 580 KLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
>ref|XP_006422531.1| hypothetical protein CICLE_v10027985mg [Citrus clementina]
gi|557524465|gb|ESR35771.1| hypothetical protein
CICLE_v10027985mg [Citrus clementina]
Length = 647
Score = 99.4 bits (246), Expect = 5e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +3
Query: 3 RLKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFPST 179
+LKHI+VEK+SAGFVYLRFEN Q+A +AQ ALHGRWFAGKMITATFMV YEAKFP +
Sbjct: 588 KLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 646
>ref|XP_002312948.2| hypothetical protein POPTR_0009s13940g [Populus trichocarpa]
gi|550331684|gb|EEE86903.2| hypothetical protein
POPTR_0009s13940g [Populus trichocarpa]
Length = 599
Score = 97.4 bits (241), Expect = 2e-18
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = +3
Query: 6 LKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFPST 179
+KHI+V+KNSAGFVY+RFEN Q A++AQ ALHGRWFAGKMITATFMV YEAKFP +
Sbjct: 541 VKHIHVDKNSAGFVYMRFENMQGAVNAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 598
>ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like
protein [Arabidopsis thaliana]
Length = 610
Score = 97.4 bits (241), Expect = 2e-18
Identities = 45/59 (76%), Positives = 50/59 (84%)
Frame = +3
Query: 3 RLKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFPST 179
+L HI+V+KNS GFVYLRFENAQAAI AQ ALHGRWFAGKMITAT+M YEAKFP +
Sbjct: 549 KLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPES 607
>ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251465|gb|AEC06559.1| splicing factor, CC1-like
protein [Arabidopsis thaliana]
Length = 599
Score = 97.4 bits (241), Expect = 2e-18
Identities = 45/59 (76%), Positives = 50/59 (84%)
Frame = +3
Query: 3 RLKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFPST 179
+L HI+V+KNS GFVYLRFENAQAAI AQ ALHGRWFAGKMITAT+M YEAKFP +
Sbjct: 538 KLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPES 596
>ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata] gi|297331927|gb|EFH62346.1| hypothetical protein
ARALYDRAFT_480573 [Arabidopsis lyrata subsp. lyrata]
Length = 557
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/58 (79%), Positives = 49/58 (84%)
Frame = +3
Query: 6 LKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFPST 179
L HIYV+KNS GFVYLRFENAQAAI AQ ALHGRWFAGKMITAT+M YEAKFP +
Sbjct: 497 LNHIYVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTVAYEAKFPES 554
>gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]
Length = 420
Score = 97.4 bits (241), Expect = 2e-18
Identities = 45/59 (76%), Positives = 50/59 (84%)
Frame = +3
Query: 3 RLKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFPST 179
+L HI+V+KNS GFVYLRFENAQAAI AQ ALHGRWFAGKMITAT+M YEAKFP +
Sbjct: 359 KLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPES 417
>gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 97.4 bits (241), Expect = 2e-18
Identities = 45/59 (76%), Positives = 50/59 (84%)
Frame = +3
Query: 3 RLKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFPST 179
+L HI+V+KNS GFVYLRFENAQAAI AQ ALHGRWFAGKMITAT+M YEAKFP +
Sbjct: 499 KLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPES 557
>ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor
[Arabidopsis thaliana] gi|133778824|gb|ABO38752.1|
At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like
protein [Arabidopsis thaliana]
Length = 561
Score = 97.4 bits (241), Expect = 2e-18
Identities = 45/59 (76%), Positives = 50/59 (84%)
Frame = +3
Query: 3 RLKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFPST 179
+L HI+V+KNS GFVYLRFENAQAAI AQ ALHGRWFAGKMITAT+M YEAKFP +
Sbjct: 500 KLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPES 558
>ref|XP_006589727.1| PREDICTED: RNA-binding protein 39-like isoform X2 [Glycine max]
Length = 421
Score = 96.3 bits (238), Expect = 4e-18
Identities = 45/58 (77%), Positives = 50/58 (86%)
Frame = +3
Query: 6 LKHIYVEKNSAGFVYLRFENAQAAISAQSALHGRWFAGKMITATFMVHSDYEAKFPST 179
LKHIYV+K SAGFVYLRFE+ Q+AISAQ ALHGRWFAGKMITA+FMV YE KFP +
Sbjct: 363 LKHIYVDKKSAGFVYLRFEDTQSAISAQQALHGRWFAGKMITASFMVPQSYEDKFPDS 420