BLASTX nr result
ID: Mentha24_contig00015166
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00015166
(1043 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008992313.1| ribosomal protein S4 (mitochondrion) [Salvia... 61 7e-07
ref|YP_006460178.1| ribosomal protein subunit S4 (mitochondrion)... 61 7e-07
gb|EPS74675.1| hypothetical protein M569_00050 [Genlisea aurea] 61 9e-07
ref|YP_717175.1| ribosomal protein S4 [Brassica napus] gi|375911... 61 9e-07
sp|Q31708.2|RT04_ARATH RecName: Full=Ribosomal protein S4, mitoc... 61 9e-07
gb|ACH78250.1| ribosomal protein S4 [Arabidopsis thaliana] 61 9e-07
ref|YP_005090421.1| rps4 gene product (mitochondrion) [Boea hygr... 60 1e-06
ref|YP_008802509.1| ribosomal protein S4 (mitochondrion) [Asclep... 59 3e-06
ref|YP_005090486.1| ribosomal protein S4 (mitochondrion) [Lotus ... 59 3e-06
ref|YP_005090450.1| ribosomal protein S4 (mitochondrion) [Millet... 59 3e-06
gb|AGL75402.1| ribosomal protein S4 (mitochondrion) [Utricularia... 59 3e-06
ref|YP_002000578.1| ribosomal protein S4 [Oryza sativa Japonica ... 59 4e-06
gb|EXB57808.1| hypothetical protein L484_002790 [Morus notabilis] 58 7e-06
dbj|BAD83538.2| ribosomal protein S4, partial (mitochondrion) [N... 58 7e-06
>ref|YP_008992313.1| ribosomal protein S4 (mitochondrion) [Salvia miltiorrhiza]
gi|534292286|gb|AGU16578.1| ribosomal protein S4
(mitochondrion) [Salvia miltiorrhiza]
Length = 351
Score = 61.2 bits (147), Expect = 7e-07
Identities = 32/65 (49%), Positives = 38/65 (58%)
Frame = +1
Query: 460 SPRQFGMXXXXXXXXXXXXDLPTHCLEVNHKIGKAIVFYGPHIAHIPLHIYMKDLNLLCG 639
SP QF M +LPTH EVNH+ KA+V YGP+I HIP I +KD NLL
Sbjct: 283 SPHQFTMNRKRKNRKIKRIELPTHYSEVNHRTPKAVVSYGPNIGHIPHDIRLKDPNLLLR 342
Query: 640 SKHER 654
S +ER
Sbjct: 343 SGNER 347
>ref|YP_006460178.1| ribosomal protein subunit S4 (mitochondrion) [Mimulus guttatus]
gi|340007672|gb|AEK26536.1| ribosomal protein subunit S4
(mitochondrion) [Mimulus guttatus]
Length = 353
Score = 61.2 bits (147), Expect = 7e-07
Identities = 32/65 (49%), Positives = 38/65 (58%)
Frame = +1
Query: 460 SPRQFGMXXXXXXXXXXXXDLPTHCLEVNHKIGKAIVFYGPHIAHIPLHIYMKDLNLLCG 639
SP QF M +LPTH EVNH+ KA+V YGP+I HIP I +KD NLL
Sbjct: 285 SPHQFTMKRKRKKRKIKRIELPTHYSEVNHRTPKAVVSYGPNIGHIPHDIRLKDPNLLLR 344
Query: 640 SKHER 654
S +ER
Sbjct: 345 SGNER 349
>gb|EPS74675.1| hypothetical protein M569_00050 [Genlisea aurea]
Length = 354
Score = 60.8 bits (146), Expect = 9e-07
Identities = 33/65 (50%), Positives = 40/65 (61%)
Frame = +1
Query: 460 SPRQFGMXXXXXXXXXXXXDLPTHCLEVNHKIGKAIVFYGPHIAHIPLHIYMKDLNLLCG 639
SP QF M +LPTH LEVNH+ KA+V YGP+I HIP I +KD NLL
Sbjct: 289 SPHQFTMKRKRKIKRI---ELPTHYLEVNHRTQKAVVSYGPNIGHIPHDIRLKDPNLLLR 345
Query: 640 SKHER 654
S++ER
Sbjct: 346 SRNER 350
>ref|YP_717175.1| ribosomal protein S4 [Brassica napus] gi|37591124|dbj|BAC98926.1|
ribosomal protein S4 [Brassica napus]
Length = 362
Score = 60.8 bits (146), Expect = 9e-07
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +1
Query: 517 DLPTHCLEVNHKIGKAIVFYGPHIAHIPLHIYMKDLNLLCGSKHER 654
+LPTH LEVN++ KA+VFYGP+I HIP I +KDLNLL S++ R
Sbjct: 313 ELPTHYLEVNYRTPKAVVFYGPNIGHIPHDIRLKDLNLLLWSRNGR 358
>sp|Q31708.2|RT04_ARATH RecName: Full=Ribosomal protein S4, mitochondrial
Length = 362
Score = 60.8 bits (146), Expect = 9e-07
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +1
Query: 517 DLPTHCLEVNHKIGKAIVFYGPHIAHIPLHIYMKDLNLLCGSKHER 654
+LPTH LEVN++ KA+VFYGP+I HIP I +KDLNLL S++ R
Sbjct: 313 ELPTHYLEVNYRTPKAVVFYGPNIGHIPHDIRLKDLNLLLWSRNGR 358
>gb|ACH78250.1| ribosomal protein S4 [Arabidopsis thaliana]
Length = 362
Score = 60.8 bits (146), Expect = 9e-07
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +1
Query: 517 DLPTHCLEVNHKIGKAIVFYGPHIAHIPLHIYMKDLNLLCGSKHER 654
+LPTH LEVN++ KA+VFYGP+I HIP I +KDLNLL S++ R
Sbjct: 313 ELPTHYLEVNYRTPKAVVFYGPNIGHIPHDIRLKDLNLLLWSRNGR 358
>ref|YP_005090421.1| rps4 gene product (mitochondrion) [Boea hygrometrica]
gi|340549497|gb|AEK53318.1| ribosomal protein S4
(mitochondrion) [Boea hygrometrica]
Length = 329
Score = 60.1 bits (144), Expect = 1e-06
Identities = 33/65 (50%), Positives = 39/65 (60%)
Frame = +1
Query: 460 SPRQFGMXXXXXXXXXXXXDLPTHCLEVNHKIGKAIVFYGPHIAHIPLHIYMKDLNLLCG 639
SP QF M +LPTH EVNH+ KA+VFYGP+I HIP I +KD NLL
Sbjct: 266 SPHQFTMKRKIKRI-----ELPTHYSEVNHRTPKAVVFYGPNIGHIPHDIRLKDPNLLLR 320
Query: 640 SKHER 654
S +ER
Sbjct: 321 SGNER 325
>ref|YP_008802509.1| ribosomal protein S4 (mitochondrion) [Asclepias syriaca]
gi|556562347|gb|AGZ63043.1| ribosomal protein S4
(mitochondrion) [Asclepias syriaca]
Length = 274
Score = 59.3 bits (142), Expect = 3e-06
Identities = 33/65 (50%), Positives = 40/65 (61%)
Frame = +1
Query: 460 SPRQFGMXXXXXXXXXXXXDLPTHCLEVNHKIGKAIVFYGPHIAHIPLHIYMKDLNLLCG 639
SP QF M +LPTH LEVN++ KA+VFYGP+I HIP I +KDLNLL
Sbjct: 211 SPHQFTMKRKRKRI-----ELPTHYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLLLW 265
Query: 640 SKHER 654
S + R
Sbjct: 266 SGNGR 270
>ref|YP_005090486.1| ribosomal protein S4 (mitochondrion) [Lotus japonicus]
gi|357197350|gb|AET62946.1| ribosomal protein S4
(mitochondrion) [Lotus japonicus]
Length = 358
Score = 59.3 bits (142), Expect = 3e-06
Identities = 33/65 (50%), Positives = 40/65 (61%)
Frame = +1
Query: 460 SPRQFGMXXXXXXXXXXXXDLPTHCLEVNHKIGKAIVFYGPHIAHIPLHIYMKDLNLLCG 639
SP QF M +LPTH LEVN++ KA+VFYGP+I HIP I +KDLNLL
Sbjct: 295 SPHQFTMKRRIKRI-----ELPTHYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLLLW 349
Query: 640 SKHER 654
S + R
Sbjct: 350 SGNGR 354
>ref|YP_005090450.1| ribosomal protein S4 (mitochondrion) [Millettia pinnata]
gi|372450274|ref|YP_005090457.1| ribosomal protein S4
(mitochondrion) [Millettia pinnata]
gi|357197313|gb|AET62910.1| ribosomal protein S4
(mitochondrion) [Millettia pinnata]
gi|357197320|gb|AET62917.1| ribosomal protein S4
(mitochondrion) [Millettia pinnata]
Length = 358
Score = 59.3 bits (142), Expect = 3e-06
Identities = 33/65 (50%), Positives = 40/65 (61%)
Frame = +1
Query: 460 SPRQFGMXXXXXXXXXXXXDLPTHCLEVNHKIGKAIVFYGPHIAHIPLHIYMKDLNLLCG 639
SP QF M +LPTH LEVN++ KA+VFYGP+I HIP I +KDLNLL
Sbjct: 295 SPHQFTMKRRIKRI-----ELPTHYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLLLW 349
Query: 640 SKHER 654
S + R
Sbjct: 350 SGNGR 354
>gb|AGL75402.1| ribosomal protein S4 (mitochondrion) [Utricularia gibba]
Length = 370
Score = 58.9 bits (141), Expect = 3e-06
Identities = 32/65 (49%), Positives = 39/65 (60%)
Frame = +1
Query: 460 SPRQFGMXXXXXXXXXXXXDLPTHCLEVNHKIGKAIVFYGPHIAHIPLHIYMKDLNLLCG 639
SP QF M +LPTH LEVNH+ KA++ YGP+I HIP I +KD NLL
Sbjct: 303 SPHQFTMKRKIKRI-----ELPTHYLEVNHRTPKAVISYGPNIGHIPHDIRLKDPNLLLR 357
Query: 640 SKHER 654
S +ER
Sbjct: 358 SGNER 362
>ref|YP_002000578.1| ribosomal protein S4 [Oryza sativa Japonica Group]
gi|92700092|dbj|BAC19883.2| Ribosomal protein S4 [Oryza
sativa Japonica Group]
Length = 352
Score = 58.5 bits (140), Expect = 4e-06
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +1
Query: 517 DLPTHCLEVNHKIGKAIVFYGPHIAHIPLHIYMKDLNLLCGSKHER 654
+LPTH LEVN++ KA+VFYGP+I HIP I +KDLNLL S + R
Sbjct: 303 ELPTHYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLLLWSGNGR 348
>gb|EXB57808.1| hypothetical protein L484_002790 [Morus notabilis]
Length = 263
Score = 57.8 bits (138), Expect = 7e-06
Identities = 32/61 (52%), Positives = 37/61 (60%)
Frame = +1
Query: 460 SPRQFGMXXXXXXXXXXXXDLPTHCLEVNHKIGKAIVFYGPHIAHIPLHIYMKDLNLLCG 639
SP QF M +LPTH LEVNH+ KA+V YGP+I HIP I +KDLNLL
Sbjct: 200 SPHQFTMKRRIKRI-----ELPTHYLEVNHRTPKAMVSYGPNIGHIPHDIRLKDLNLLLR 254
Query: 640 S 642
S
Sbjct: 255 S 255
>dbj|BAD83538.2| ribosomal protein S4, partial (mitochondrion) [Nicotiana tabacum]
Length = 349
Score = 57.8 bits (138), Expect = 7e-06
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +1
Query: 517 DLPTHCLEVNHKIGKAIVFYGPHIAHIPLHIYMKDLNLLCGS 642
+LPTH LEVN++ KA+VFYGP+I HIP I +KDLNLL S
Sbjct: 300 ELPTHYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLLLWS 341