BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00015165
         (1021 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008992313.1| ribosomal protein S4 (mitochondrion) [Salvia...    69   2e-09
ref|YP_008802509.1| ribosomal protein S4 (mitochondrion) [Asclep...    69   4e-09
ref|YP_002000578.1| ribosomal protein S4 [Oryza sativa Japonica ...    68   5e-09
ref|YP_717175.1| ribosomal protein S4 [Brassica napus] gi|375911...    68   7e-09
sp|Q31708.2|RT04_ARATH RecName: Full=Ribosomal protein S4, mitoc...    68   7e-09
gb|ACH78250.1| ribosomal protein S4 [Arabidopsis thaliana]             68   7e-09
dbj|BAD83538.2| ribosomal protein S4, partial (mitochondrion) [N...    67   1e-08
ref|YP_005090486.1| ribosomal protein S4 (mitochondrion) [Lotus ...    67   2e-08
ref|YP_005090450.1| ribosomal protein S4 (mitochondrion) [Millet...    67   2e-08
ref|YP_004222288.1| ribosomal protein S4 [Beta vulgaris subsp. m...    65   4e-08
ref|NP_064046.2| rps4 gene product (mitochondrion) [Beta vulgari...    65   4e-08
ref|YP_006460178.1| ribosomal protein subunit S4 (mitochondrion)...    65   6e-08
gb|EPS74675.1| hypothetical protein M569_00050 [Genlisea aurea]        64   1e-07
ref|YP_005090421.1| rps4 gene product (mitochondrion) [Boea hygr...    62   5e-07
gb|AGL75402.1| ribosomal protein S4 (mitochondrion) [Utricularia...    61   8e-07
gb|AHA47128.1| ribosomal protein S4 (mitochondrion) [Amborella t...    60   2e-06
gb|EXB57808.1| hypothetical protein L484_002790 [Morus notabilis]      59   2e-06
ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus] gi|...    59   3e-06
gb|EXB66620.1| Ribosomal protein S4 [Morus notabilis]                  59   4e-06
ref|YP_006280945.1| ribosomal protein S4 (mitochondrion) [Spirod...    58   5e-06

>ref|YP_008992313.1| ribosomal protein S4 (mitochondrion) [Salvia miltiorrhiza]
           gi|534292286|gb|AGU16578.1| ribosomal protein S4
           (mitochondrion) [Salvia miltiorrhiza]
          Length = 351

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 34/65 (52%), Positives = 43/65 (66%)
 Frame = -2

Query: 561 SPQQLGTNRFRRNXXXXXIDLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNLLCW 382
           SP Q   NR R+N     I+LPTHY EVNH+  KA++ YGP+I HIP  + +KD NLL  
Sbjct: 283 SPHQFTMNRKRKNRKIKRIELPTHYSEVNHRTPKAVVSYGPNIGHIPHDIRLKDPNLLLR 342

Query: 381 SEHER 367
           S +ER
Sbjct: 343 SGNER 347


>ref|YP_008802509.1| ribosomal protein S4 (mitochondrion) [Asclepias syriaca]
           gi|556562347|gb|AGZ63043.1| ribosomal protein S4
           (mitochondrion) [Asclepias syriaca]
          Length = 274

 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 33/65 (50%), Positives = 43/65 (66%)
 Frame = -2

Query: 561 SPQQLGTNRFRRNXXXXXIDLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNLLCW 382
           SP Q    R R+       +LPTHYLEVN++  KA++FYGP+I HIP  + +KDLNLL W
Sbjct: 211 SPHQFTMKRKRKRI-----ELPTHYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLLLW 265

Query: 381 SEHER 367
           S + R
Sbjct: 266 SGNGR 270


>ref|YP_002000578.1| ribosomal protein S4 [Oryza sativa Japonica Group]
           gi|92700092|dbj|BAC19883.2| Ribosomal protein S4 [Oryza
           sativa Japonica Group]
          Length = 352

 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 31/56 (55%), Positives = 40/56 (71%)
 Frame = -2

Query: 534 FRRNXXXXXIDLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNLLCWSEHER 367
           F R      I+LPTHYLEVN++  KA++FYGP+I HIP  + +KDLNLL WS + R
Sbjct: 293 FTRKIRIKRIELPTHYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLLLWSGNGR 348


>ref|YP_717175.1| ribosomal protein S4 [Brassica napus] gi|37591124|dbj|BAC98926.1|
           ribosomal protein S4 [Brassica napus]
          Length = 362

 Score = 67.8 bits (164), Expect = 7e-09
 Identities = 28/46 (60%), Positives = 37/46 (80%)
 Frame = -2

Query: 504 DLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNLLCWSEHER 367
           +LPTHYLEVN++  KA++FYGP+I HIP  + +KDLNLL WS + R
Sbjct: 313 ELPTHYLEVNYRTPKAVVFYGPNIGHIPHDIRLKDLNLLLWSRNGR 358


>sp|Q31708.2|RT04_ARATH RecName: Full=Ribosomal protein S4, mitochondrial
          Length = 362

 Score = 67.8 bits (164), Expect = 7e-09
 Identities = 28/46 (60%), Positives = 37/46 (80%)
 Frame = -2

Query: 504 DLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNLLCWSEHER 367
           +LPTHYLEVN++  KA++FYGP+I HIP  + +KDLNLL WS + R
Sbjct: 313 ELPTHYLEVNYRTPKAVVFYGPNIGHIPHDIRLKDLNLLLWSRNGR 358


>gb|ACH78250.1| ribosomal protein S4 [Arabidopsis thaliana]
          Length = 362

 Score = 67.8 bits (164), Expect = 7e-09
 Identities = 28/46 (60%), Positives = 37/46 (80%)
 Frame = -2

Query: 504 DLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNLLCWSEHER 367
           +LPTHYLEVN++  KA++FYGP+I HIP  + +KDLNLL WS + R
Sbjct: 313 ELPTHYLEVNYRTPKAVVFYGPNIGHIPHDIRLKDLNLLLWSRNGR 358


>dbj|BAD83538.2| ribosomal protein S4, partial (mitochondrion) [Nicotiana tabacum]
          Length = 349

 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 29/54 (53%), Positives = 40/54 (74%)
 Frame = -2

Query: 540 NRFRRNXXXXXIDLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNLLCWS 379
           ++F +      I+LPTHYLEVN++  KA++FYGP+I HIP  + +KDLNLL WS
Sbjct: 288 HQFTKKIKIKRIELPTHYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLLLWS 341


>ref|YP_005090486.1| ribosomal protein S4 (mitochondrion) [Lotus japonicus]
           gi|357197350|gb|AET62946.1| ribosomal protein S4
           (mitochondrion) [Lotus japonicus]
          Length = 358

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 28/46 (60%), Positives = 37/46 (80%)
 Frame = -2

Query: 504 DLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNLLCWSEHER 367
           +LPTHYLEVN++  KA++FYGP+I HIP  + +KDLNLL WS + R
Sbjct: 309 ELPTHYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLLLWSGNGR 354


>ref|YP_005090450.1| ribosomal protein S4 (mitochondrion) [Millettia pinnata]
           gi|372450274|ref|YP_005090457.1| ribosomal protein S4
           (mitochondrion) [Millettia pinnata]
           gi|357197313|gb|AET62910.1| ribosomal protein S4
           (mitochondrion) [Millettia pinnata]
           gi|357197320|gb|AET62917.1| ribosomal protein S4
           (mitochondrion) [Millettia pinnata]
          Length = 358

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 28/46 (60%), Positives = 37/46 (80%)
 Frame = -2

Query: 504 DLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNLLCWSEHER 367
           +LPTHYLEVN++  KA++FYGP+I HIP  + +KDLNLL WS + R
Sbjct: 309 ELPTHYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLLLWSGNGR 354


>ref|YP_004222288.1| ribosomal protein S4 [Beta vulgaris subsp. maritima]
           gi|317905723|emb|CBJ14108.1| ribosomal protein S4 [Beta
           vulgaris subsp. maritima] gi|319439803|emb|CBJ17515.1|
           ribosomal protein S4 [Beta vulgaris subsp. maritima]
          Length = 315

 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 27/42 (64%), Positives = 34/42 (80%)
 Frame = -2

Query: 504 DLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNLLCWS 379
           +LPTHY EVNH+  KA++FYGP+I HIP  + +KDLNLL WS
Sbjct: 266 ELPTHYSEVNHRTLKAVVFYGPNIDHIPHDIRLKDLNLLLWS 307


>ref|NP_064046.2| rps4 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|346683270|ref|YP_004842202.1| ribosomal protein S4
           [Beta macrocarpa] gi|87248052|gb|ABD36080.1| ribosomal
           protein S4 [Beta vulgaris subsp. vulgaris]
           gi|148491424|dbj|BAA99356.2| ribosomal protein S4 [Beta
           vulgaris subsp. vulgaris] gi|320148708|emb|CBJ23346.1|
           ribosomal protein S4 [Beta vulgaris subsp. maritima]
           gi|345500188|emb|CBX25007.1| ribosomal protein S4 [Beta
           macrocarpa] gi|384939188|emb|CBL52035.1| ribosoma
           lprotein S4 (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 315

 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 27/42 (64%), Positives = 34/42 (80%)
 Frame = -2

Query: 504 DLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNLLCWS 379
           +LPTHY EVNH+  KA++FYGP+I HIP  + +KDLNLL WS
Sbjct: 266 ELPTHYSEVNHRTLKAVVFYGPNIDHIPHDIRLKDLNLLLWS 307


>ref|YP_006460178.1| ribosomal protein subunit S4 (mitochondrion) [Mimulus guttatus]
           gi|340007672|gb|AEK26536.1| ribosomal protein subunit S4
           (mitochondrion) [Mimulus guttatus]
          Length = 353

 Score = 64.7 bits (156), Expect = 6e-08
 Identities = 32/65 (49%), Positives = 41/65 (63%)
 Frame = -2

Query: 561 SPQQLGTNRFRRNXXXXXIDLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNLLCW 382
           SP Q    R R+      I+LPTHY EVNH+  KA++ YGP+I HIP  + +KD NLL  
Sbjct: 285 SPHQFTMKRKRKKRKIKRIELPTHYSEVNHRTPKAVVSYGPNIGHIPHDIRLKDPNLLLR 344

Query: 381 SEHER 367
           S +ER
Sbjct: 345 SGNER 349


>gb|EPS74675.1| hypothetical protein M569_00050 [Genlisea aurea]
          Length = 354

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 33/65 (50%), Positives = 43/65 (66%)
 Frame = -2

Query: 561 SPQQLGTNRFRRNXXXXXIDLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNLLCW 382
           SP Q    R R+      I+LPTHYLEVNH+ +KA++ YGP+I HIP  + +KD NLL  
Sbjct: 289 SPHQFTMKRKRK---IKRIELPTHYLEVNHRTQKAVVSYGPNIGHIPHDIRLKDPNLLLR 345

Query: 381 SEHER 367
           S +ER
Sbjct: 346 SRNER 350


>ref|YP_005090421.1| rps4 gene product (mitochondrion) [Boea hygrometrica]
           gi|340549497|gb|AEK53318.1| ribosomal protein S4
           (mitochondrion) [Boea hygrometrica]
          Length = 329

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 27/46 (58%), Positives = 35/46 (76%)
 Frame = -2

Query: 504 DLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNLLCWSEHER 367
           +LPTHY EVNH+  KA++FYGP+I HIP  + +KD NLL  S +ER
Sbjct: 280 ELPTHYSEVNHRTPKAVVFYGPNIGHIPHDIRLKDPNLLLRSGNER 325


>gb|AGL75402.1| ribosomal protein S4 (mitochondrion) [Utricularia gibba]
          Length = 370

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 27/46 (58%), Positives = 35/46 (76%)
 Frame = -2

Query: 504 DLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNLLCWSEHER 367
           +LPTHYLEVNH+  KA++ YGP+I HIP  + +KD NLL  S +ER
Sbjct: 317 ELPTHYLEVNHRTPKAVISYGPNIGHIPHDIRLKDPNLLLRSGNER 362


>gb|AHA47128.1| ribosomal protein S4 (mitochondrion) [Amborella trichopoda]
          Length = 354

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 29/58 (50%), Positives = 38/58 (65%)
 Frame = -2

Query: 540 NRFRRNXXXXXIDLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNLLCWSEHER 367
           +RF R      I+LPTHYLEVN++  KA++FYGP I HIP  + +KD NL   S + R
Sbjct: 284 HRFTRKRRIKRIELPTHYLEVNYRTLKAVVFYGPDIGHIPHDIRLKDPNLPLRSRNGR 341


>gb|EXB57808.1| hypothetical protein L484_002790 [Morus notabilis]
          Length = 263

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 25/39 (64%), Positives = 32/39 (82%)
 Frame = -2

Query: 504 DLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNLL 388
           +LPTHYLEVNH+  KA++ YGP+I HIP  + +KDLNLL
Sbjct: 214 ELPTHYLEVNHRTPKAMVSYGPNIGHIPHDIRLKDLNLL 252


>ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus]
           gi|259156791|gb|ACV96653.1| ribosomal protein S4
           [Citrullus lanatus]
          Length = 355

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 24/38 (63%), Positives = 32/38 (84%)
 Frame = -2

Query: 504 DLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNL 391
           +LPTHYLEVN++  KA++FYGP+I HIP  + +KDLNL
Sbjct: 306 ELPTHYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNL 343


>gb|EXB66620.1| Ribosomal protein S4 [Morus notabilis]
          Length = 307

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = -2

Query: 504 DLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNLLCWSEHER 367
           +LPTHY EVNH+  KA++ YGP+I HIP  + +KDLNLL  S + R
Sbjct: 258 ELPTHYSEVNHRTPKAVVSYGPNIGHIPHDIRLKDLNLLLRSGNGR 303


>ref|YP_006280945.1| ribosomal protein S4 (mitochondrion) [Spirodela polyrhiza]
           gi|385252646|gb|AFI54954.1| ribosomal protein S4
           (mitochondrion) [Spirodela polyrhiza]
          Length = 349

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 26/50 (52%), Positives = 35/50 (70%)
 Frame = -2

Query: 540 NRFRRNXXXXXIDLPTHYLEVNHKIKKAIMFYGPHIAHIPLHVSMKDLNL 391
           ++F R      I+LPTHY EVNH+ KKA++ YGP+I HIP  + +KD NL
Sbjct: 288 HQFTRKRRIKRIELPTHYSEVNHRTKKAVVSYGPNIGHIPHDIRLKDPNL 337