BLASTX nr result
ID: Mentha24_contig00010975
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00010975
(614 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus... 392 e-107
gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea] 369 e-100
emb|CBI36559.3| unnamed protein product [Vitis vinifera] 369 e-100
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 369 e-100
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras... 365 7e-99
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 365 7e-99
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras... 363 3e-98
emb|CAC95026.1| plastid RNA polymerase [Nicotiana tabacum] 363 3e-98
ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 361 1e-97
ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prun... 361 1e-97
ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 359 3e-97
ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isof... 357 2e-96
ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isof... 357 2e-96
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [... 357 2e-96
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 356 3e-96
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu... 356 3e-96
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 353 2e-95
ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 353 2e-95
ref|NP_973525.2| DNA-directed RNA polymerase 3 [Arabidopsis thal... 353 3e-95
ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thal... 353 3e-95
>gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus guttatus]
Length = 941
Score = 392 bits (1006), Expect = e-107
Identities = 189/204 (92%), Positives = 198/204 (97%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKIH+ANLYGGGVEKLSYD RV+FVE
Sbjct: 526 YPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHVANLYGGGVEKLSYDDRVAFVE 585
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
NNI+EI DSADNSLNGNRWWLKAEDPFQCLAACINL EALKS SPHTVISHLPIHQDGSC
Sbjct: 586 NNISEIFDSADNSLNGNRWWLKAEDPFQCLAACINLVEALKSPSPHTVISHLPIHQDGSC 645
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGRDSFEAAAVNLVAGD+PSDVYSEIAERVH IMKRDSEKDPETD +AL+AK
Sbjct: 646 NGLQHYAALGRDSFEAAAVNLVAGDKPSDVYSEIAERVHNIMKRDSEKDPETDRHALIAK 705
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
+LIGQVDRKLVKQTVMTSVYGVTY
Sbjct: 706 VLIGQVDRKLVKQTVMTSVYGVTY 729
>gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]
Length = 952
Score = 369 bits (947), Expect = e-100
Identities = 178/204 (87%), Positives = 191/204 (93%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHLNHLSSDLCRGILEF++GRPLGKSGL WLK+HLANL+GGGV+KL YD R+SFVE
Sbjct: 537 YPMHPHLNHLSSDLCRGILEFSEGRPLGKSGLYWLKLHLANLFGGGVQKLPYDERLSFVE 596
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
NNI E+ DSADN L+GNRWWLKAEDPFQ LAACIN+SEAL+SSSPHTVISHLPIHQDGSC
Sbjct: 597 NNITEVFDSADNPLSGNRWWLKAEDPFQFLAACINISEALRSSSPHTVISHLPIHQDGSC 656
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGRDSFEAAAVNLVAG +P+DVYSEIAERV IMK DSEKDP DPNA+LAK
Sbjct: 657 NGLQHYAALGRDSFEAAAVNLVAGHKPTDVYSEIAERVLDIMKSDSEKDPADDPNAVLAK 716
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
LLIGQVDRKLVKQTVMTSVYGVTY
Sbjct: 717 LLIGQVDRKLVKQTVMTSVYGVTY 740
>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
Length = 808
Score = 369 bits (946), Expect = e-100
Identities = 175/204 (85%), Positives = 191/204 (93%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKI LANLY GGVEKLSYD R++FV+
Sbjct: 393 YPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAFVD 452
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
N++ ++ DSADN LNGNRWWL AEDPFQCLAACINLSEAL+SSSPHTVISHLPIHQDGSC
Sbjct: 453 NHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTVISHLPIHQDGSC 512
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGR+S EA+AVNLVAG++P+DVYSEIA RVH IMKRDS KDP TDP ALLAK
Sbjct: 513 NGLQHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPKALLAK 572
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
+LIGQVDRKLVKQTVMTSVYGVTY
Sbjct: 573 VLIGQVDRKLVKQTVMTSVYGVTY 596
>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
vinifera]
Length = 979
Score = 369 bits (946), Expect = e-100
Identities = 175/204 (85%), Positives = 191/204 (93%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKI LANLY GGVEKLSYD R++FV+
Sbjct: 564 YPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAFVD 623
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
N++ ++ DSADN LNGNRWWL AEDPFQCLAACINLSEAL+SSSPHTVISHLPIHQDGSC
Sbjct: 624 NHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTVISHLPIHQDGSC 683
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGR+S EA+AVNLVAG++P+DVYSEIA RVH IMKRDS KDP TDP ALLAK
Sbjct: 684 NGLQHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPKALLAK 743
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
+LIGQVDRKLVKQTVMTSVYGVTY
Sbjct: 744 VLIGQVDRKLVKQTVMTSVYGVTY 767
>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; AltName:
Full=NsRpoT-C; AltName: Full=T7 bacteriophage-type single
subunit RNA polymerase 3; Flags: Precursor
gi|59800203|sp|P69243.1|RPO3A_TOBAC RecName:
Full=DNA-directed RNA polymerase 3A, chloroplastic;
AltName: Full=NictaRpoT3-syl; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 3A;
Flags: Precursor gi|21425641|emb|CAC82576.3| phage-type
RNA polymerase [Nicotiana sylvestris]
gi|21425679|emb|CAC95027.2| plastid RNA polymerase
[Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 977
Score = 365 bits (936), Expect = 7e-99
Identities = 177/204 (86%), Positives = 190/204 (93%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLKIHLA+LY GG+EKL YDAR++FVE
Sbjct: 562 YPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGIEKLCYDARLAFVE 621
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
N+I +ILDSA+N LNGNRWWL AEDPFQCLAACINLSEALKSSSPHTV SHLPIHQDGSC
Sbjct: 622 NHIDDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVFSHLPIHQDGSC 681
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGRDS EAAAVNLVAGD+P+DVY+EIA RV I++ DS KDP TDPNALLAK
Sbjct: 682 NGLQHYAALGRDSMEAAAVNLVAGDKPADVYTEIALRVDHIIRGDSIKDPATDPNALLAK 741
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
LLI QVDRKLVKQTVMTSVYGVTY
Sbjct: 742 LLIDQVDRKLVKQTVMTSVYGVTY 765
>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 973
Score = 365 bits (936), Expect = 7e-99
Identities = 173/204 (84%), Positives = 188/204 (92%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKIHLANLY GGVEKLSYD R+SFV+
Sbjct: 558 YPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYSGGVEKLSYDGRISFVD 617
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
N+I +I DSA N +NGNRWWL AEDP QCLAACINLSEAL S SPHTVISHLPIHQDGSC
Sbjct: 618 NHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSPHTVISHLPIHQDGSC 677
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGRD+ EAAAVNLVAG++P+DVYSEIA RVH IMKRDS KDP T+PNALLAK
Sbjct: 678 NGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAVRVHDIMKRDSNKDPTTNPNALLAK 737
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
+L+ Q+DRKLVKQTVMTSVYGVTY
Sbjct: 738 VLVNQIDRKLVKQTVMTSVYGVTY 761
>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName:
Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 3B; Flags: Precursor
gi|21425667|emb|CAC95021.2| chloroplast RNA polymerase
[Nicotiana tabacum]
Length = 977
Score = 363 bits (931), Expect = 3e-98
Identities = 177/204 (86%), Positives = 190/204 (93%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLKIHLA+LY GGVEKL YDAR++FVE
Sbjct: 562 YPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGVEKLCYDARLAFVE 621
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
N+I +ILDSA+N LNGNRWWL AEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC
Sbjct: 622 NHIHDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 681
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGRDS EAAAVNLVAG++P+DVY+EIA RV I++ DS KDP DPNALLAK
Sbjct: 682 NGLQHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSIKDPAIDPNALLAK 741
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
LLI QVDRKLVKQTVMTSVYGVTY
Sbjct: 742 LLIDQVDRKLVKQTVMTSVYGVTY 765
>emb|CAC95026.1| plastid RNA polymerase [Nicotiana tabacum]
Length = 557
Score = 363 bits (931), Expect = 3e-98
Identities = 177/204 (86%), Positives = 190/204 (93%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLKIHLA+LY GGVEKL YDAR++FVE
Sbjct: 145 YPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGVEKLCYDARLAFVE 204
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
N+I +ILDSA+N LNGNRWWL AEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC
Sbjct: 205 NHIHDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 264
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGRDS EAAAVNLVAG++P+DVY+EIA RV I++ DS KDP DPNALLAK
Sbjct: 265 NGLQHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSIKDPAIDPNALLAK 324
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
LLI QVDRKLVKQTVMTSVYGVTY
Sbjct: 325 LLIDQVDRKLVKQTVMTSVYGVTY 348
>ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum
tuberosum]
Length = 1015
Score = 361 bits (926), Expect = 1e-97
Identities = 174/204 (85%), Positives = 188/204 (92%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLK+HLA+LY GG+EKL YDAR++FVE
Sbjct: 600 YPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVE 659
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
N+I +ILDSA N LNGNRWWL AEDP QCLAACINLSEALKS SPHTVISHLPIHQDGSC
Sbjct: 660 NHIDDILDSAHNPLNGNRWWLNAEDPLQCLAACINLSEALKSPSPHTVISHLPIHQDGSC 719
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGRDS EAAAVNLVAG++P+DVY+EIA RV I++ DS KDP TDPNALLAK
Sbjct: 720 NGLQHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAK 779
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
LLI QVDRKLVKQTVMTSVYGVTY
Sbjct: 780 LLIDQVDRKLVKQTVMTSVYGVTY 803
>ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
gi|462398756|gb|EMJ04424.1| hypothetical protein
PRUPE_ppa000868mg [Prunus persica]
Length = 976
Score = 361 bits (926), Expect = 1e-97
Identities = 171/204 (83%), Positives = 186/204 (91%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKIHLANLY GGVEKLSY+ R++FV+
Sbjct: 561 YPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVEKLSYEGRLAFVD 620
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
N+I +I DSA N +NGNRWWL AEDP QCLAACINLSEAL S SPHTVISHLPIHQDGSC
Sbjct: 621 NHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSPHTVISHLPIHQDGSC 680
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGRDS EAAAVNLV GD+P+DVYSEIA RVH IMKRDS KDP T PNALLA+
Sbjct: 681 NGLQHYAALGRDSLEAAAVNLVDGDKPADVYSEIAARVHEIMKRDSNKDPTTSPNALLAR 740
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
+L+ Q+DRKLVKQTVMTSVYGVTY
Sbjct: 741 ILVNQIDRKLVKQTVMTSVYGVTY 764
>ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum
lycopersicum]
Length = 1007
Score = 359 bits (922), Expect = 3e-97
Identities = 173/204 (84%), Positives = 188/204 (92%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLK+HLA+LY GG+EKL YDAR++FVE
Sbjct: 592 YPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVE 651
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
N+I +ILDSA N LNGNRWWL AEDP QCLAACINLSEA+KS SPHTVISHLPIHQDGSC
Sbjct: 652 NHIDDILDSAHNPLNGNRWWLNAEDPLQCLAACINLSEAVKSLSPHTVISHLPIHQDGSC 711
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGRDS EAAAVNLVAG++P+DVY+EIA RV I++ DS KDP TDPNALLAK
Sbjct: 712 NGLQHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAK 771
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
LLI QVDRKLVKQTVMTSVYGVTY
Sbjct: 772 LLIDQVDRKLVKQTVMTSVYGVTY 795
>ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
gi|508784241|gb|EOY31497.1| DNA/RNA polymerases
superfamily protein isoform 2 [Theobroma cacao]
Length = 857
Score = 357 bits (916), Expect = 2e-96
Identities = 168/204 (82%), Positives = 191/204 (93%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHLNHLSSDLCRG+LEFA+GRPLG+SGL WLKIHLANL+ GGVEKLS+D R++FV+
Sbjct: 441 YPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLFAGGVEKLSHDGRLAFVD 500
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
N++ +I DSA+N +NGNRWWL AEDPFQCLAACINLSE+LKSSSPH+V+S+LPIHQDGSC
Sbjct: 501 NHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSSSPHSVLSYLPIHQDGSC 560
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGRDS EAAAVNLVAG++P+DVYSEIA RVH IMKRDS+KDP T+PNA LAK
Sbjct: 561 NGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDPATNPNASLAK 620
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
LLI QVDRKLVKQTVMTSVYGVT+
Sbjct: 621 LLIDQVDRKLVKQTVMTSVYGVTF 644
>ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
gi|508784240|gb|EOY31496.1| DNA/RNA polymerases
superfamily protein isoform 1 [Theobroma cacao]
Length = 978
Score = 357 bits (916), Expect = 2e-96
Identities = 168/204 (82%), Positives = 191/204 (93%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHLNHLSSDLCRG+LEFA+GRPLG+SGL WLKIHLANL+ GGVEKLS+D R++FV+
Sbjct: 563 YPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLFAGGVEKLSHDGRLAFVD 622
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
N++ +I DSA+N +NGNRWWL AEDPFQCLAACINLSE+LKSSSPH+V+S+LPIHQDGSC
Sbjct: 623 NHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSSSPHSVLSYLPIHQDGSC 682
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGRDS EAAAVNLVAG++P+DVYSEIA RVH IMKRDS+KDP T+PNA LAK
Sbjct: 683 NGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDPATNPNASLAK 742
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
LLI QVDRKLVKQTVMTSVYGVT+
Sbjct: 743 LLIDQVDRKLVKQTVMTSVYGVTF 766
>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 882
Score = 357 bits (916), Expect = 2e-96
Identities = 169/204 (82%), Positives = 188/204 (92%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHL HLSSDLCRG+LEF +GRPLGKSGLRWLKIHLANLY GGVEKLS+D R++FVE
Sbjct: 467 YPMHPHLTHLSSDLCRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHDGRLAFVE 526
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
N+++EI DSA N +NG RWWLKAEDPFQCLAACINLSEAL S+SPHTVISHLPIHQDGSC
Sbjct: 527 NHLSEIFDSAKNPVNGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHLPIHQDGSC 586
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGRD+ EAAAVNLVA ++PSDVYSEIA RVH I++RDS KDP T+P+ALLAK
Sbjct: 587 NGLQHYAALGRDTLEAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATNPHALLAK 646
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
+L+ QVDRKLVKQTVMTSVYGVTY
Sbjct: 647 ILVDQVDRKLVKQTVMTSVYGVTY 670
>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Citrus
sinensis]
Length = 1009
Score = 356 bits (914), Expect = 3e-96
Identities = 169/204 (82%), Positives = 189/204 (92%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHLNHLSSD+CRG+LEFA+GRPLGKSGLRWLKIHLANL+ GGVEKLS+D R++FVE
Sbjct: 594 YPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVE 653
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
N++ EI DSA+N +NG+RWWL AEDPFQCLAACINLSEALKSSSPH+VISHLPIHQDGSC
Sbjct: 654 NHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLSEALKSSSPHSVISHLPIHQDGSC 713
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGR++ EAAAVNLVAG++P+DVYSEIA RVH IMKRDS KDP P ALLAK
Sbjct: 714 NGLQHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDPSKHPQALLAK 773
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
+LI QVDRKLVKQTVMTSVYGVT+
Sbjct: 774 ILIDQVDRKLVKQTVMTSVYGVTF 797
>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
gi|222854390|gb|EEE91937.1| hypothetical protein
POPTR_0006s19490g [Populus trichocarpa]
Length = 982
Score = 356 bits (913), Expect = 3e-96
Identities = 170/204 (83%), Positives = 189/204 (92%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHL HLSSDLCRG+LEFA+GRPLGKSGL WLKIHLANLY GGVEKLS+D R++FVE
Sbjct: 567 YPMHPHLTHLSSDLCRGVLEFAEGRPLGKSGLCWLKIHLANLYSGGVEKLSHDGRLAFVE 626
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
N+++EI DSA+N +NG RWWL AEDPFQCLAACINLSEALKS+SPHTVISHLPIHQDGSC
Sbjct: 627 NHLSEIFDSAENPVNGKRWWLTAEDPFQCLAACINLSEALKSASPHTVISHLPIHQDGSC 686
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGRDS EAAAVNLVA ++PSDVYSEIA RVH I++RDS KDP T+P+ALLAK
Sbjct: 687 NGLQHYAALGRDSQEAAAVNLVAAEKPSDVYSEIATRVHEIIRRDSNKDPATNPHALLAK 746
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
+LI +VDRKLVKQTVMTSVYGVTY
Sbjct: 747 VLIDEVDRKLVKQTVMTSVYGVTY 770
>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
sativus]
Length = 975
Score = 353 bits (906), Expect = 2e-95
Identities = 168/204 (82%), Positives = 187/204 (91%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGL WLKIHLANLY GGVEKLSYD R++FV+
Sbjct: 560 YPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDERLAFVD 619
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
+++ I DSA N +NG+RWWL AEDPFQCLAAC+NLSEALKSS+PHTVIS+LPIHQDGSC
Sbjct: 620 DHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPHTVISYLPIHQDGSC 679
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGRD+ EAAAVNLVAG++P+DVYSEIA RVH IM RD+ KDP T+PNA LAK
Sbjct: 680 NGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDASKDPTTNPNASLAK 739
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
LLI QVDRKLVKQTVMTSVYGVTY
Sbjct: 740 LLIDQVDRKLVKQTVMTSVYGVTY 763
>ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
sativus]
Length = 975
Score = 353 bits (906), Expect = 2e-95
Identities = 168/204 (82%), Positives = 187/204 (91%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGL WLKIHLANLY GGVEKLSYD R++FV+
Sbjct: 560 YPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDERLAFVD 619
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
+++ I DSA N +NG+RWWL AEDPFQCLAAC+NLSEALKSS+PHTVIS+LPIHQDGSC
Sbjct: 620 DHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPHTVISYLPIHQDGSC 679
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGRD+ EAAAVNLVAG++P+DVYSEIA RVH IM RD+ KDP T+PNA LAK
Sbjct: 680 NGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDASKDPTTNPNASLAK 739
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
LLI QVDRKLVKQTVMTSVYGVTY
Sbjct: 740 LLIDQVDRKLVKQTVMTSVYGVTY 763
>ref|NP_973525.2| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
gi|330252436|gb|AEC07530.1| DNA-directed RNA polymerase 3
[Arabidopsis thaliana]
Length = 895
Score = 353 bits (905), Expect = 3e-95
Identities = 166/204 (81%), Positives = 190/204 (93%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHLNHLSSDLCRG LEFA+GRPLGKSGL WLKIHLANLY GGVEKLS+DAR++FVE
Sbjct: 578 YPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSHDARLAFVE 637
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
N++ +I+DSA+N ++G RWWLKAEDPFQCLAAC+ L++ALKS SP++VISHLPIHQDGSC
Sbjct: 638 NHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSPYSVISHLPIHQDGSC 697
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGRDSFEAAAVNLVAG++P+DVYSEI+ RVH IMK+DS KDPE++P A LAK
Sbjct: 698 NGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDSSKDPESNPTAALAK 757
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
+LI QVDRKLVKQTVMTSVYGVTY
Sbjct: 758 ILITQVDRKLVKQTVMTSVYGVTY 781
>ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
gi|3914826|sp|O24600.1|RPOT3_ARATH RecName:
Full=DNA-directed RNA polymerase 3, chloroplastic; Flags:
Precursor gi|2330560|emb|CAA69972.1| chloroplast
single-subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|2330564|emb|CAA69717.1| chloroplast
single-subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|4115372|gb|AAD03373.1| chloroplast single
subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|110739160|dbj|BAF01496.1| chloroplast single
subunit DNA-dependent RNA polymerase [Arabidopsis
thaliana] gi|330252437|gb|AEC07531.1| DNA-directed RNA
polymerase 3 [Arabidopsis thaliana]
Length = 993
Score = 353 bits (905), Expect = 3e-95
Identities = 166/204 (81%), Positives = 190/204 (93%)
Frame = -2
Query: 613 YPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVE 434
YPMHPHLNHLSSDLCRG LEFA+GRPLGKSGL WLKIHLANLY GGVEKLS+DAR++FVE
Sbjct: 578 YPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSHDARLAFVE 637
Query: 433 NNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSC 254
N++ +I+DSA+N ++G RWWLKAEDPFQCLAAC+ L++ALKS SP++VISHLPIHQDGSC
Sbjct: 638 NHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSPYSVISHLPIHQDGSC 697
Query: 253 NGLQHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAK 74
NGLQHYAALGRDSFEAAAVNLVAG++P+DVYSEI+ RVH IMK+DS KDPE++P A LAK
Sbjct: 698 NGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDSSKDPESNPTAALAK 757
Query: 73 LLIGQVDRKLVKQTVMTSVYGVTY 2
+LI QVDRKLVKQTVMTSVYGVTY
Sbjct: 758 ILITQVDRKLVKQTVMTSVYGVTY 781