BLASTX nr result

ID: Mentha23_contig00016220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00016220
         (405 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU44299.1| hypothetical protein MIMGU_mgv1a000432mg [Mimulus...   134   1e-29
dbj|BAF64424.1| nuclear matrix constituent protein 1-like [Petro...    57   2e-06
dbj|BAA20407.1| nuclear matrix constituent protein 1 [Daucus car...    56   4e-06
ref|XP_006346853.1| PREDICTED: putative nuclear matrix constitue...    55   8e-06
ref|XP_006346852.1| PREDICTED: putative nuclear matrix constitue...    55   8e-06
gb|EYU28946.1| hypothetical protein MIMGU_mgv1a000453mg [Mimulus...    55   1e-05

>gb|EYU44299.1| hypothetical protein MIMGU_mgv1a000432mg [Mimulus guttatus]
          Length = 1157

 Score =  134 bits (338), Expect = 1e-29
 Identities = 83/156 (53%), Positives = 98/156 (62%), Gaps = 22/156 (14%)
 Frame = -2

Query: 404  NDEIQAEPDQVVTAKNRRKRDRAEGSHATVSESQTEDHSESIKDGNRPKRRQRVAAGLAT 225
            NDE Q E D V T K+RRKR R  GS ATVS+SQTE HS+SIKDG+RPKRRQRV   +A 
Sbjct: 937  NDESQTESDLVGTTKDRRKRTRVHGSQATVSDSQTEGHSDSIKDGDRPKRRQRV---VAA 993

Query: 224  EQNLGQKRYNLRQSKRSAGQVANGPLPQVRKGNENVEN---------------SGAPRDE 90
            EQ++GQ+RYNLRQ K+S G   NG LPQVRKG EN  +                GA R+E
Sbjct: 994  EQSVGQRRYNLRQPKKSVG-TTNGSLPQVRKGKENESDKLPVLEADQYENFVTEGASREE 1052

Query: 89   V-------PSPRRSMNADGDDLVRSTAAASEFSADS 3
            +       P P+R     G++ VRS   ASEFSADS
Sbjct: 1053 IDECGAAAPLPKR---FGGEEPVRSNNGASEFSADS 1085


>dbj|BAF64424.1| nuclear matrix constituent protein 1-like [Petroselinum crispum]
          Length = 1119

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
 Frame = -2

Query: 362  KNRRKRDRAEGSHATVSE--SQTEDHSESIKDGNRPKRRQRVAAGLATEQNLGQKRYNLR 189
            +N RKR+ ++ S +   E  + +E HS+S+  G R KRR++V   +         RYNLR
Sbjct: 923  RNSRKRNPSQPSQSAAGEVGADSEGHSDSVTAGGRQKRRRKVVPAVQAPTG----RYNLR 978

Query: 188  QSKRSAGQVANGPLPQVRKGNE-NVENSGAPRDEVP 84
            + K +A  VANG L    KG E  +++ G   +E+P
Sbjct: 979  RHKTAAPLVANGALSDPNKGKEKEIDDGGGIGEEIP 1014


>dbj|BAA20407.1| nuclear matrix constituent protein 1 [Daucus carota]
          Length = 1119

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
 Frame = -2

Query: 362  KNRRKRDRAEGSHATVSE--SQTEDHSESIKDGNRPKRRQRVAAGLATEQNLGQKRYNLR 189
            +N RKR+ ++ S +   +  + +E HS+S+  G R KRR++V   +         RYNLR
Sbjct: 923  RNSRKRNPSQPSQSAAGDVGADSEGHSDSVTAGGRQKRRRKVVPAVQAPTG----RYNLR 978

Query: 188  QSKRSAGQVANGPLPQVRKGNE-NVENSGAPRDEVP 84
            + K +A  VANG L    KG E  +++ G   +E+P
Sbjct: 979  RHKTAAPLVANGALSDPNKGKEKEIDDGGGIGEEIP 1014


>ref|XP_006346853.1| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like isoform X2 [Solanum tuberosum]
          Length = 1094

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
 Frame = -2

Query: 353  RKRDRAEGSHATVSESQTEDHSESIKDGNRPKRRQRVAAGLATEQNLGQKRYNLRQSKRS 174
            RKR R  G+ +    S ++  S+S+   +R KRRQ+ A  +   Q  G+KRYNLR+ + +
Sbjct: 892  RKRTRIHGTASEFDGSHSDGQSDSVTATSRRKRRQKAAPSV---QAPGEKRYNLRRPRSA 948

Query: 173  AGQVANGPLPQV--RKGNENVENSGAPRDEVPSPRRSMNADGDDLVRSTAAASEFSADS 3
            A   ANG LP++  +   EN ++   P  E P+      A  D  +R++ AA    ADS
Sbjct: 949  AIATANGSLPELVSKSQEENGDSKAVP--ETPA------AISDGELRNSDAALPAVADS 999


>ref|XP_006346852.1| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like isoform X1 [Solanum tuberosum]
          Length = 1166

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
 Frame = -2

Query: 353  RKRDRAEGSHATVSESQTEDHSESIKDGNRPKRRQRVAAGLATEQNLGQKRYNLRQSKRS 174
            RKR R  G+ +    S ++  S+S+   +R KRRQ+ A  +   Q  G+KRYNLR+ + +
Sbjct: 964  RKRTRIHGTASEFDGSHSDGQSDSVTATSRRKRRQKAAPSV---QAPGEKRYNLRRPRSA 1020

Query: 173  AGQVANGPLPQV--RKGNENVENSGAPRDEVPSPRRSMNADGDDLVRSTAAASEFSADS 3
            A   ANG LP++  +   EN ++   P  E P+      A  D  +R++ AA    ADS
Sbjct: 1021 AIATANGSLPELVSKSQEENGDSKAVP--ETPA------AISDGELRNSDAALPAVADS 1071


>gb|EYU28946.1| hypothetical protein MIMGU_mgv1a000453mg [Mimulus guttatus]
          Length = 1144

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 43/105 (40%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
 Frame = -2

Query: 356  RRKRDRAEGSHATVS---ESQTEDHSESIKDGNRPKRRQRVAAGLATEQNLGQKRYNLRQ 186
            RRKR RA+ S  T S   +  +E HSES+  G R KR Q  A  +   QN GQ RYNLR+
Sbjct: 956  RRKRTRAQSSKMTESVDADYDSEGHSESVTAGGRRKRHQTAAPAV---QNSGQTRYNLRR 1012

Query: 185  --SKRSAGQVANGPLPQVRKGNENV----ENSGAPRDEVPSPRRS 69
              SK  A    +  +P    G   V    E + AP +EV S +RS
Sbjct: 1013 HTSKGVAISTDSERIPDKEVGYATVSRDNEITSAPPEEVTSQKRS 1057


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