BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00016214
         (2757 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             309   4e-81
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   300   2e-78
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   280   7e-78
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   295   8e-77
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               286   2e-76
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   289   5e-75
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00...   234   3e-74
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       277   9e-74
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   271   4e-72
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   262   2e-71
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   276   5e-71
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   264   1e-70
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   271   1e-69
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   259   2e-69
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   265   4e-69
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   269   6e-69
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           269   6e-69
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                  269   6e-69
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   258   7e-68
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                257   2e-67

>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  309 bits (792), Expect = 4e-81
 Identities = 194/569 (34%), Positives = 287/569 (50%), Gaps = 35/569 (6%)
 Frame = +2

Query: 221  PLLALMLFIK*SQKILISRMALFLQKLISLAQSVFIKGRTIMDNFYLAQELIRTYERKSG 400
            PL    +  K   KI+ +R+ + L K I+  Q+ F+K R +++N  LA EL++ Y ++S 
Sbjct: 58   PLSCCNVIYKIISKIIANRLKMVLPKFIAGNQTAFVKDRLLIENLLLATELVKDYHKES- 116

Query: 401  ITARCMVKIDLRKAYDCISWDFLRDVLHGLNFHPCFVYWILTYVISATFSITINGGSHGF 580
            +++RC +KID+ KA++ + W F+R++L  ++F   FV+WI+  + +A+FS+ +NG   GF
Sbjct: 117  VSSRCAIKIDISKAFNSVQWSFIRNILLSMDFPMEFVHWIMLCISTASFSVQVNGELVGF 176

Query: 581  VRGKRGLRQGDPMSPTLFLFCMEYLSRLIHARTHDSTFMHHPKCSTTDTTHLAFADDLLL 760
             + KRGLRQG  +SP LF+  M+ LS+L+        F +H +C     THL+FADDL++
Sbjct: 177  FQSKRGLRQGCSLSPYLFVMSMDVLSKLLDQAASAKKFGYHSRCKELSLTHLSFADDLMV 236

Query: 761  FGRGDPDSMRVLRDALDEFTVTSGLTINKSKSHIFLGGVRPFEKRAIMELFGFPEGTLPV 940
               G   S+  + +  D F   SGL I+  KS I+L GV       I   + F  G LPV
Sbjct: 237  LSDGKVRSIDGIVEVFDIFAKFSGLKISMEKSTIYLAGVTEDVYHEIQNRYQFDVGQLPV 296

Query: 941  KYLGLPLASKSLTIPDYSPLLAQISNFIQRWSNSNLSSAGWLELIRSVLQGVGCYWLQAL 1120
            +YLGLPL +K LT  DYSPLL  I   I  W+   LS AG L LI SVL  +  +WL A 
Sbjct: 297  RYLGLPLVTKRLTATDYSPLLEHIKKKIGTWTTRYLSYAGRLNLITSVLWSICNFWLAAF 356

Query: 1121 PLPGTVINRITKMLRKFLWCN-----SQCLVSWKTVCLPRGEGGLGLRDL---------- 1255
             LP   I  I K+   FLW        +  V W  VC P+ EGGLGLR L          
Sbjct: 357  RLPRECIREIDKICSAFLWSGPDLNPRKTRVCWGDVCKPKQEGGLGLRSLKEMNEVSCLK 416

Query: 1256 AVW-----NNPFIRRPCGTYMPKQTPFGSNGSTLSTSEDRTFGKG----------TSEAY 1390
             +W      N    R    Y+ K   F S  +T  T+ D    +G          T + +
Sbjct: 417  LIWRIVSHTNSLWVRWIEQYLLKHDTFWSVQTT--TNMDSVLWRGRNDEYMPKFSTRDTW 474

Query: 1391 EHFRAKGEKKFWYKAVWRSYIPPKFSVTLWLALHGRLKTFDRMKYSD--IARGCVLCEST 1564
               R       W+  +W ++  PKFS   WLA+  RL T D+M   +  ++  CVLC + 
Sbjct: 475  NQTRNTSTPVTWHMGIWFAHATPKFSFCAWLAVQNRLSTGDKMLQWNRRLSPTCVLCNNN 534

Query: 1565 DETHDHLFFKFEKALAVWSGICSWL---RCRNQMTTIPSVVRRFQREKAGSGIIRKAKWV 1735
             ET +HLFF       +W  +   +   +     +TI + V    R +  S + R     
Sbjct: 535  IETRNHLFFSCCYTAEIWENLAKNIYKAKFSTNWSTILTSVSTTWRNRTESFLAR----Y 590

Query: 1736 ALGATVQYLWHARNLKYVEKKPFEASHVI 1822
               AT+  +WH RN +   ++   A+H+I
Sbjct: 591  IFQATIHTIWHERNGRRHGERSNSATHLI 619


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  300 bits (769), Expect = 2e-78
 Identities = 192/582 (32%), Positives = 279/582 (47%), Gaps = 45/582 (7%)
 Frame = +2

Query: 221  PLLALMLFIK*SQKILISRMALFLQKLISLAQSVFIKGRTIMDNFYLAQELIRTYERKSG 400
            P+    +  K   K+L +RM   + ++++ AQS FI GR I DN  LA ELIR Y RK  
Sbjct: 516  PIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKH- 574

Query: 401  ITARCMVKIDLRKAYDCISWDFLRDVLHGLNFHPCFVYWILTYVISATFSITINGGSHGF 580
            ++ RC++K+D+RKAYD + W FL  +L+   F   FV WI+  V + ++S+ +NG     
Sbjct: 575  MSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQP 634

Query: 581  VRGKRGLRQGDPMSPTLFLFCMEYLSRLIHARTHDSTFMHHPKCSTTDTTHLAFADDLLL 760
             + ++GLRQGDPMSP LF  CMEYLSR +        F  HPKC   + THL FADDLL+
Sbjct: 635  FQARKGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLM 694

Query: 761  FGRGDPDSMRVLRDALDEFTVTSGLTINKSKSHIFLGGVRPFEKRAIMELFGFPEGTLPV 940
            F R D  S+  +  A  +F+  SGL  +  KS+I+  GV     R + +      G LP 
Sbjct: 695  FCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPF 754

Query: 941  KYLGLPLASKSLTIPDYSPLLAQISNFIQRWSNSNLSSAGWLELIRSVLQGVGCYWLQAL 1120
            +YLG+PL SK LT     PL+  I+N  Q W    LS AG L+LI+S+L  +  YW    
Sbjct: 755  RYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIF 814

Query: 1121 PLPGTVINRITKMLRKFLWC-----NSQCLVSWKTVCLPRGEGGLGLRDLAVWNNP---- 1273
            PL   VI  + K+ RKFLW        +  V+W T+  P+  GG  + ++  WN      
Sbjct: 815  PLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLK 874

Query: 1274 ------------FIRRPCGTYMPKQTPFGSNGSTLSTSEDRTFGK--------------- 1372
                        ++R     Y+ +Q     N S  +T   R   K               
Sbjct: 875  LLWAIEFKRDKLWVRWIHSYYIKRQDILTVNISNQTTWILRKIVKARDHLSNIGDWDEIC 934

Query: 1373 -----GTSEAYEHFRAKGEKKFWYKAVWRSYIPPKFSVTLWLALHGRLKTFDRMKYSDIA 1537
                    +AY+     GE+  W + +  +Y  PK    LW+ LH RL T DR+    + 
Sbjct: 935  IGDKFSMKKAYKKISENGERVRWRRLICNNYATPKSKFILWMMLHERLPTVDRISRWGVQ 994

Query: 1538 --RGCVLCESTDETHDHLFFKFEKALAVWSGICSWLRCRNQMTTIPSVVRRFQREKAGSG 1711
                  LC +  ET  HLFF    +  VWS IC  +R  N   +   ++        G  
Sbjct: 995  CDLNYRLCRNDGETIQHLFFSCSYSAGVWSKICYIMRFPNSGVSHQEII----SSVCGQA 1050

Query: 1712 IIRKAKWVALGAT--VQYLWHARNLKYVEKKPFEASHVIKEI 1831
              +K K + +  T  V  +W  RN +    +  + + V+++I
Sbjct: 1051 RKKKGKLIVMLYTEFVYAIWKQRNKRTFTGENKDENEVLRKI 1092



 Score = 87.8 bits (216), Expect = 2e-14
 Identities = 41/87 (47%), Positives = 59/87 (67%)
 Frame = +1

Query: 1   IRTALFDIGDEKAPGPDGYTSAFFKKNWDLVRDDVVASVDEFFSK*IILRKLNHTVVSLI 180
           I  AL  IG++KAPG DG+ + FFKK+W  ++ ++ A + EFF+   + R +N  VV+L+
Sbjct: 443 IDEALAGIGNDKAPGLDGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLL 502

Query: 181 PKTTHDPGVGDFRPIACTNVVYKIITK 261
           PK  H   V +FRPIAC  V+YKII+K
Sbjct: 503 PKVQHATRVKEFRPIACCTVIYKIISK 529


>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
            lycopersicum]
          Length = 717

 Score =  280 bits (717), Expect(2) = 7e-78
 Identities = 143/339 (42%), Positives = 203/339 (59%), Gaps = 5/339 (1%)
 Frame = +2

Query: 290  LQKLISLAQSVFIKGRTIMDNFYLAQELIRTYERKSGITARCMVKIDLRKAYDCISWDFL 469
            +  +IS +Q+ FI GR I DN  LA EL++ Y RK+ ++ RCM+KIDL KAYD + W FL
Sbjct: 347  IHTIISDSQAGFIPGRKIGDNIILAHELVKAYTRKN-VSPRCMLKIDLHKAYDSVEWPFL 405

Query: 470  RDVLHGLNFHPCFVYWILTYVISATFSITINGGSHGFVRGKRGLRQGDPMSPTLFLFCME 649
              V+ GL F   F  W++  V +  ++I +NG +       +GLRQGDPMSP LF   ME
Sbjct: 406  EQVMEGLGFPDLFTKWVMKCVKTVNYTIVVNGQNTQRFDAAKGLRQGDPMSPFLFAIAME 465

Query: 650  YLSRLIHARTHDSTFMHHPKCSTTDTTHLAFADDLLLFGRGDPDSMRVLRDALDEFTVTS 829
            YLSRL+     D +F +HPK +  D THL FADDLLLF RGD +S++ L+    EF+  S
Sbjct: 466  YLSRLLKGLKEDKSFKYHPKYAKLDVTHLCFADDLLLFSRGDLNSIKALQKCFTEFSQAS 525

Query: 830  GLTINKSKSHIFLGGVRPFEKRAIMELFGFPEGTLPVKYLGLPLASKSLTIPDYSPLLAQ 1009
            GL  N +KS I+ GGV+   ++ I++  G+    LP KYLG+PL+SK L    + PL+ +
Sbjct: 526  GLQANLNKSSIYCGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNTIQWYPLIEK 585

Query: 1010 ISNFIQRWSNSNLSSAGWLELIRSVLQGVGCYWLQALPLPGTVINRITKMLRKFLW---- 1177
            +   I  W+   LS AG  +L+++VL GV   W Q   +P  +I  I  + R +LW    
Sbjct: 586  VMARINSWTAKKLSYAGRAQLVKTVLFGVQALWAQLFIIPAKIIKLIEGLCRSYLWSGVG 645

Query: 1178 -CNSQCLVSWKTVCLPRGEGGLGLRDLAVWNNPFIRRPC 1291
                + L++W  VC P+ EGGLGL +L +WN   + + C
Sbjct: 646  YVTKKALIAWDKVCSPKYEGGLGLINLKIWNRSAVTKLC 684



 Score = 40.4 bits (93), Expect(2) = 7e-78
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +1

Query: 1267 QSLHSKTLWNIHAKTDSLWIKWIHAEYLRG*DIW 1368
            +S  +K  W++  K D LWIKWIHA Y++G   W
Sbjct: 677  RSAVTKLCWDLANKEDKLWIKWIHAYYIKGQREW 710


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  295 bits (755), Expect = 8e-77
 Identities = 188/604 (31%), Positives = 283/604 (46%), Gaps = 55/604 (9%)
 Frame = +2

Query: 185  RRLMTRELEISGPLLALMLFIK*SQKILISRMALFLQKLISLAQSVFIKGRTIMDNFYLA 364
            +R   +E++   P+    +  K   K+L +R+   L + I+  QS FI  R +M+N  LA
Sbjct: 785  KRTYAKEMKDYRPISCCNVLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLMENLLLA 844

Query: 365  QELIRTYERKSGITARCMVKIDLRKAYDCISWDFLRDVLHGLNFHPCFVYWILTYVISAT 544
             EL++ Y  K G++ RC +KIDL KA+D + W FL + L  L+    F++WI   + +A+
Sbjct: 845  SELVKDYH-KDGLSPRCAMKIDLSKAFDSVQWPFLLNTLAALDIPEKFIHWINLCISTAS 903

Query: 545  FSITINGGSHGFVRGKRGLRQGDPMSPTLFLFCMEYLSRLIHARTHDSTFMHHPKCSTTD 724
            FS+ +NG           LRQG  +SP LF+ CM  LS ++     +  F +HP+C    
Sbjct: 904  FSVQVNG-----------LRQGCSLSPYLFVICMNVLSAMLDKGAVEKRFGYHPRCRNMG 952

Query: 725  TTHLAFADDLLLFGRGDPDSMRVLRDALDEFTVTSGLTINKSKSHIFLGGVRPFEKRAIM 904
             THL FADD+++F  G   S+  +     +F   SGL I+  KS +F+  +      +I+
Sbjct: 953  LTHLCFADDIMVFSAGSAHSLEGVLAIFKDFAAFSGLNISLEKSTLFMASISSETCASIL 1012

Query: 905  ELFGFPEGTLPVKYLGLPLASKSLTIPDYSPLLAQISNFIQRWSNSNLSSAGWLELIRSV 1084
              F F  G+LPV+YLGLPL +K +T+ D  PLL +I + I  W N  LS AG L+L+ SV
Sbjct: 1013 ARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSV 1072

Query: 1085 LQGVGCYWLQALPLPGTVINRITKMLRKFLWCNS-----QCLVSWKTVCLPRGEGGLGLR 1249
            +  +  +W+ A  LP   I  I ++   FLW  +     +  V+W  VC P+ EGGLGLR
Sbjct: 1073 ISSLTKFWISAFRLPRACIREIEQISAAFLWSGTDLNPHKAKVAWHDVCKPKSEGGLGLR 1132

Query: 1250 DLA----------VWNNPFIRRPCGTYMPKQTPFGSNGSTLS------------------ 1345
             L           +W     +        +     +    LS                  
Sbjct: 1133 SLVDANKICCFKLIWRLVSAKHSLWVNWIQNNLIRTVAEALSSHRRRSHRDDILNDIEEE 1192

Query: 1346 ----------TSEDRTFGKG----------TSEAYEHFRAKGEKKFWYKAVWRSYIPPKF 1465
                      T +DR+  +           + E +   R +G  K W+KA+W S   PKF
Sbjct: 1193 LEKLLCRGICTEQDRSLCRSIGGQFKAKFFSPEIWHQIREQGLVKQWHKAIWFSGATPKF 1252

Query: 1466 SVTLWLALHGRLKTFDRMK--YSDIARGCVLCESTDETHDHLFFKFEKALAVWSGICSWL 1639
            +   WLA H RL T D+M      I+  CVLC  + E+ DHLFF    +  +W  +   L
Sbjct: 1253 TFISWLAAHDRLTTGDKMASWNRGISSVCVLCNISAESRDHLFFSCNFSSHIWDRLTRRL 1312

Query: 1640 RCRNQMTTIPSVVRRFQREKAGSGIIRKAKWVALGATVQYLWHARNLKYVEKKPFEASHV 1819
                  T  P+++     +   SG  R        AT+  LW  RN +     P  + H+
Sbjct: 1313 LLCRYTTNFPALLLLLSGQDF-SGTKRFLLRYVFQATIHTLWRERNKRRHGDLPIPSDHI 1371

Query: 1820 IKEI 1831
            IK I
Sbjct: 1372 IKFI 1375



 Score = 81.3 bits (199), Expect = 2e-12
 Identities = 35/87 (40%), Positives = 56/87 (64%)
 Frame = +1

Query: 1   IRTALFDIGDEKAPGPDGYTSAFFKKNWDLVRDDVVASVDEFFSK*IILRKLNHTVVSLI 180
           +    F I   K+PGPDGYT  FF++ W ++  +V  ++  FF+   + + LN T+++LI
Sbjct: 724 VMKVFFSIPLNKSPGPDGYTVEFFRETWSVIGQEVTMAIKSFFTYGFLPKGLNSTILALI 783

Query: 181 PKTTHDPGVGDFRPIACTNVVYKIITK 261
           PK T+   + D+RPI+C NV+YK I+K
Sbjct: 784 PKRTYAKEMKDYRPISCCNVLYKAISK 810


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  286 bits (731), Expect(2) = 2e-76
 Identities = 155/392 (39%), Positives = 221/392 (56%), Gaps = 5/392 (1%)
 Frame = +2

Query: 110  LPWMNSFQNESSSGNLTTPSFRSSQRRLMTRELEISGPLLALMLFIK*SQKILISRMALF 289
            LP  + FQ       + +       ++L  +E+    P+    +  K   KI+ +R+ L 
Sbjct: 141  LPVQSFFQKGFLPKGINSIILALIPKKLAAKEMRDYRPISCCNVLYKVISKIIANRLKLL 200

Query: 290  LQKLISLAQSVFIKGRTIMDNFYLAQELIRTYERKSGITARCMVKIDLRKAYDCISWDFL 469
            L + I+  QS F+K R +++N  LA EL++ Y + S I+ARC +KID+ KA+D + W FL
Sbjct: 201  LPRFIAENQSAFVKDRLLIENLLLATELVKDYHKDS-ISARCAIKIDISKAFDSVQWSFL 259

Query: 470  RDVLHGLNFHPCFVYWILTYVISATFSITINGGSHGFVRGKRGLRQGDPMSPTLFLFCME 649
             + L  +NF P F++WI   + +A+FS+ +NG   G+ + KRGLRQG  +SP LF+ CM+
Sbjct: 260  TNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYLFVICMD 319

Query: 650  YLSRLIHARTHDSTFMHHPKCSTTDTTHLAFADDLLLFGRGDPDSMRVLRDALDEFTVTS 829
             LS+++        F  HPKC     THL+FADDL++   G   S+  + +  DEF   S
Sbjct: 320  VLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFDEFCKRS 379

Query: 830  GLTINKSKSHIFLGGVRPFEKRAIMELFGFPEGTLPVKYLGLPLASKSLTIPDYSPLLAQ 1009
            GL I+  KS +++ GV P  K+ I   F F  G LPV+YLGLPL +K LT  DYSPLL Q
Sbjct: 380  GLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQ 439

Query: 1010 ISNFIQRWSNSNLSSAGWLELIRSVLQGVGCYWLQALPLPGTVINRITKMLRKFLWCNSQ 1189
            I   I  W+    S AG   LI+SVL  +  +WL A  LP   I  I K+   FLW  S+
Sbjct: 440  IKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGSE 499

Query: 1190 -----CLVSWKTVCLPRGEGGLGLRDLAVWNN 1270
                   +SW  VC P+ EGGLGLR+L   N+
Sbjct: 500  MSSHKAKISWDIVCKPKAEGGLGLRNLKEAND 531



 Score = 30.4 bits (67), Expect(2) = 2e-76
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 1282 KTLWNIHAKTDSLWIKWIHAEYLRG*DIW 1368
            K +W I + ++SLW KW+    +R   IW
Sbjct: 536  KLVWRIISNSNSLWTKWVAEYLIRKKSIW 564



 Score = 86.7 bits (213), Expect = 5e-14
 Identities = 37/87 (42%), Positives = 57/87 (65%)
 Frame = +1

Query: 1   IRTALFDIGDEKAPGPDGYTSAFFKKNWDLVRDDVVASVDEFFSK*IILRKLNHTVVSLI 180
           I+T LF +  +K+PGPDGYTS F+K  WD++  +    V  FF K  + + +N  +++LI
Sbjct: 105 IKTVLFSMPKDKSPGPDGYTSEFYKATWDIIGQEFTLPVQSFFQKGFLPKGINSIILALI 164

Query: 181 PKTTHDPGVGDFRPIACTNVVYKIITK 261
           PK      + D+RPI+C NV+YK+I+K
Sbjct: 165 PKKLAAKEMRDYRPISCCNVLYKVISK 191



 Score = 69.3 bits (168), Expect = 9e-09
 Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
 Frame = +2

Query: 1343 STSEDRTFGKGTSEAYE-HF---------RAKGEKKFWYKAVWRSYIPPKFSVTLWLALH 1492
            S +ED    +G ++ ++ HF         +A      W+K VW  +  PK+++  WLA+H
Sbjct: 666  SDAEDTVLWRGKNDVFKPHFSTRDTWHLIKATSSTVSWHKGVWFRHATPKYALCTWLAIH 725

Query: 1493 GRLKTFDRM----KYSDIARGCVLCESTDETHDHLFFKFEKALAVWSGICSWL---RCRN 1651
             RL T DRM        ++  CVLC +  +T +HLFF    A  VW+ +   +   R   
Sbjct: 726  NRLPTGDRMLKWNSSGSVSGNCVLCTNNSKTLEHLFFSCSYASTVWAALAKGIWKTRYST 785

Query: 1652 QMTTIPSVVRRFQREKAGSGIIRKAKWVALGATVQYLWHARNLKYVEKKPFEASHVI 1822
            + + + + +    +++    + R        AT+ ++W  RN +  +  P   + VI
Sbjct: 786  RWSHLLTHISTHFQDRVEGFLTR----YIFQATIYHVWRERNGRRHDAAPNTPATVI 838


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  289 bits (739), Expect = 5e-75
 Identities = 179/527 (33%), Positives = 274/527 (51%), Gaps = 39/527 (7%)
 Frame = +2

Query: 314  QSVFIKGRTIMDNFYLAQELIRTYERKSGITARCMVKIDLRKAYDCISWDFLRDVLHGLN 493
            Q+ F+ G+ + D+  LA EL+R YERK G T +CM++ID++KAYD + WD L  +L  L 
Sbjct: 375  QAAFVPGQQLHDHVMLAFELLRGYERKHG-TPKCMLQIDIQKAYDTVHWDALEHILRELG 433

Query: 494  FHPCFVYWILTYVISATFSITINGGSHGFVRGKRGLRQGDPMSPTLFLFCMEYLSRLIHA 673
            F   F+ WI+  V S T+   ING     +  +RG+RQGDP+SP LF+  MEYL+R++  
Sbjct: 434  FPDQFIKWIMIAVRSVTYVFNINGRFTRRLEARRGIRQGDPISPLLFILVMEYLNRILSQ 493

Query: 674  RTHDSTFMHHPKCSTTDTTHLAFADDLLLFGRGDPDSMRVLRDALDEFTVTSGLTINKSK 853
                  F +H KC     T+L FADDLLLF RGD  S++++ D  + F  + GL +N SK
Sbjct: 494  LDKIPNFNYHSKCEKMKITNLCFADDLLLFSRGDIGSVQIMLDKFNTFLRSMGLHVNPSK 553

Query: 854  SHIFLGGVRPFEKRAIMELFGFPEGTLPVKYLGLPLASKSLTIPDYSPLLAQISNFIQRW 1033
             +I+ G V    K  ++ + GF EG +P +YLG+PL+SK L I  Y  L+ +I   I  W
Sbjct: 554  CNIYCGSVDINVKEQLLLISGFKEGKMPFRYLGIPLSSKKLNIKHYQVLIDKIVGRITHW 613

Query: 1034 SNSNLSSAGWLELIRSVLQGVGCYWLQALPLPGTVINRITKMLRKFLWCNSQCL-----V 1198
            S   LS AG ++LI+SV+     +W+Q LPLP  VI RI  + R FLW  +  +     +
Sbjct: 614  SAGLLSYAGRVQLIQSVIFATINFWMQCLPLPKFVIMRINAICRSFLWIGNSNISRKSPI 673

Query: 1199 SWKTVCLPRGEGGLGLRDLAVWN----------------NPFIRRPCGTYMPKQTPFG-- 1324
            +W+ VC P+  GGL + +LA+WN                N +I+     Y+  Q+ +   
Sbjct: 674  AWEKVCSPKINGGLNIINLAIWNKISILKLLWNVCNKSDNLWIKWLHTYYIRGQSIWSMV 733

Query: 1325 --SNGSTLSTSEDR---TFGKGTSEAYEHFRAK---------GEKKFWYKAVWRSYIPPK 1462
               + S + +S  +      +  S   + F+ K          EK  W   +  +   P+
Sbjct: 734  LKKSHSWIMSSMMKLRPLLLQYQSRMQDVFKMKKIYLALFEESEKMSWRTLMCNNLARPR 793

Query: 1463 FSVTLWLALHGRLKTFDRM-KYS-DIARGCVLCESTDETHDHLFFKFEKALAVWSGICSW 1636
                LW A H RL + DR+ K+  ++   C  C S  E+H+HLFF   +   +W+ + +W
Sbjct: 794  ALFCLWQACHFRLASKDRLIKFGLNVDANCAFCSSM-ESHEHLFFGCIELKTIWTAVLNW 852

Query: 1637 LRCRNQMTTIPSVVRRFQREKAGSGIIRKAKWVALGATVQYLWHARN 1777
            L+  +  +T    +    R+  G G        A   T+ ++W  RN
Sbjct: 853  LQIIHMPSTWSEELNWITRKCKGKGWRAMLLKCAFTETIYHIWAYRN 899


>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
            thaliana]
          Length = 1253

 Score =  234 bits (597), Expect(2) = 3e-74
 Identities = 125/341 (36%), Positives = 191/341 (56%), Gaps = 5/341 (1%)
 Frame = +2

Query: 260  KILISRMALFLQKLISLAQSVFIKGRTIMDNFYLAQELIRTYERKSGITARCMVKIDLRK 439
            ++L +R+   L ++IS  QS F+ GR + +N  LA EL++ Y R++ I  R M+K+DLRK
Sbjct: 491  RLLTNRLQCLLSQVISPFQSAFLPGRFLAENVLLATELVQGYNRQN-IDPRGMLKVDLRK 549

Query: 440  AYDCISWDFLRDVLHGLNFHPCFVYWILTYVISATFSITINGGSHGFVRGKRGLRQGDPM 619
            A+D I WDF+   L  +     FVYWI   + + TFS+ +NG + GF +  RGLRQG+P+
Sbjct: 550  AFDSIRWDFIISALKAIGIPDRFVYWITQCISTPTFSVCVNGNTGGFFKSTRGLRQGNPL 609

Query: 620  SPTLFLFCMEYLSRLIHARTHDSTFMHHPKCSTTDTTHLAFADDLLLFGRGDPDSMRVLR 799
            SP LF+  ME  S L+++R       +HPK S    +HL FADD+++F  G   S+  + 
Sbjct: 610  SPFLFVLAMEVFSSLLNSRFQAGYIHYHPKTSPLSISHLMFADDIMVFFDGGSSSLHGIS 669

Query: 800  DALDEFTVTSGLTINKSKSHIFLGGVRPFEKRAIMELFGFPEGTLPVKYLGLPLASKSLT 979
            +AL++F   SGL +N+ K+H++L G+   E   I                     ++ L 
Sbjct: 670  EALEDFAFWSGLVLNREKTHLYLAGLDRIEASTI---------------------ARKLR 708

Query: 980  IPDYSPLLAQISNFIQRWSNSNLSSAGWLELIRSVLQGVGCYWLQALPLPGTVINRITKM 1159
            I +Y PLL +++   + WS   LS AG ++LI SV+ G+  +W+    LP   + RI  +
Sbjct: 709  IAEYGPLLEKLAKRFRSWSVKCLSFAGRVQLIASVISGIINFWISTFILPKGCVKRIEAL 768

Query: 1160 LRKFLWCNS-----QCLVSWKTVCLPRGEGGLGLRDLAVWN 1267
              +FLW  +        V+W  VCLP+ EGG+GLR   V N
Sbjct: 769  CARFLWSGNIDVKKGAKVAWSEVCLPKEEGGVGLRRFTVLN 809



 Score = 74.3 bits (181), Expect(2) = 3e-74
 Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
 Frame = +1

Query: 1   IRTALFDIGDEKAPGPDGYTSAFFKKNWDLVRDDVVASVDEFFSK*IILRKLNHTVVSLI 180
           I++A F     K  GPDG+   FFK+ W ++  +V  +V EFF+  ++L++ N T + LI
Sbjct: 401 IKSAFFSFPSNKTSGPDGFPVEFFKETWSVIGTEVTDAVSEFFTSSVLLKQWNATTLVLI 460

Query: 181 PKTTHDPGVGDFRPIACTN----VVYKIITK 261
           PK T+   + DFRPI+C +     +YK+I +
Sbjct: 461 PKITNASKMNDFRPISCNDFGPITLYKVIAR 491


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  277 bits (709), Expect(2) = 9e-74
 Identities = 146/360 (40%), Positives = 210/360 (58%), Gaps = 5/360 (1%)
 Frame = +2

Query: 221  PLLALMLFIK*SQKILISRMALFLQKLISLAQSVFIKGRTIMDNFYLAQELIRTYERKSG 400
            P+  L    K   ++L  R+   L  +IS AQS F+ GR++ +N  LA +L+  Y   S 
Sbjct: 525  PISCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNW-SN 583

Query: 401  ITARCMVKIDLRKAYDCISWDFLRDVLHGLNFHPCFVYWILTYVISATFSITINGGSHGF 580
            I+ R M+K+DL+KA+D + W+F+   L  L     F+ WI   + + TF+++INGG+ GF
Sbjct: 584  ISPRGMLKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGF 643

Query: 581  VRGKRGLRQGDPMSPTLFLFCMEYLSRLIHARTHDSTFMHHPKCSTTDTTHLAFADDLLL 760
             +  +GLRQGDP+SP LF+  ME  S L+H+R       +HPK S    +HL FADD+++
Sbjct: 644  FKSTKGLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDVMI 703

Query: 761  FGRGDPDSMRVLRDALDEFTVTSGLTINKSKSHIFLGGVRPFEKRAIMELFGFPEGTLPV 940
            F  G   S+  + + LD+F   SGL +NK KSH++L G+   E  A    +GFP GTLP+
Sbjct: 704  FFDGGSFSLHGICETLDDFASWSGLKVNKDKSHLYLAGLNQLESNA-NAAYGFPIGTLPI 762

Query: 941  KYLGLPLASKSLTIPDYSPLLAQISNFIQRWSNSNLSSAGWLELIRSVLQGVGCYWLQAL 1120
            +YLGLPL ++ L I +Y PLL +I+   + W N  LS AG ++LI SV+ G   +W+   
Sbjct: 763  RYLGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTF 822

Query: 1121 PLPGTVINRITKMLRKFLWCNS-----QCLVSWKTVCLPRGEGGLGLRDLAVWNNPFIRR 1285
             LP   I RI  +  +FLW  +        VSW  +CLP+ EGGLGLR L  WN     R
Sbjct: 823  LLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMR 882



 Score = 29.6 bits (65), Expect(2) = 9e-74
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 1267 QSLHSKTLWNIHAKTDSLWIKWIHAEYLRG*DIW 1368
            ++L  + +W +    DSLW  W H  +L     W
Sbjct: 877  KTLSMRLIWRLFVAKDSLWADWQHLHHLSRGSFW 910



 Score = 81.3 bits (199), Expect = 2e-12
 Identities = 37/87 (42%), Positives = 55/87 (63%)
 Frame = +1

Query: 1   IRTALFDIGDEKAPGPDGYTSAFFKKNWDLVRDDVVASVDEFFSK*IILRKLNHTVVSLI 180
           IR ALF +   K+ GPDG+T+ FF  +W +V  +V  ++ EFFS   +L++ N T + LI
Sbjct: 452 IRAALFSLPRNKSCGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLI 511

Query: 181 PKTTHDPGVGDFRPIACTNVVYKIITK 261
           PK  +     DFRPI+C N +YK+I +
Sbjct: 512 PKIVNPTCTSDFRPISCLNTLYKVIAR 538


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  271 bits (693), Expect(2) = 4e-72
 Identities = 151/355 (42%), Positives = 203/355 (57%), Gaps = 6/355 (1%)
 Frame = +2

Query: 221  PLLALMLFIK*SQKILISRMALFLQKLISLAQSVFIKGRTIMDNFYLAQELIRTYERKSG 400
            P+     F K   K+L +R+   L  ++  +QS FI GR I DN  LAQE+I  Y +  G
Sbjct: 352  PISCCNTFYKIIAKLLANRLKGTLHLIVGPSQSTFIPGRRIGDNILLAQEIICDYHKADG 411

Query: 401  ITARCMVKIDLRKAYDCISWDFLRDVLHGLNFHPCFVYWILTYVISATFSITINGGSHGF 580
               RC   +D+ KA D + WDF+   L   N     + WI + + SA FS+ +NG   GF
Sbjct: 412  -QPRCTFMVDMMKANDTVEWDFIIATLQAFNIPSTLIGWIKSCISSAKFSVCVNGELAGF 470

Query: 581  VRGKRGLRQGDPMSPTLFLFCMEYLSRLIHARTHDST-FMHHPKCSTTDTTHLAFADDLL 757
               +RGLRQGDP+SP LF+  ME LS  I  R + S  F +H +C   + +HL FADDLL
Sbjct: 471  FARRRGLRQGDPLSPYLFVIAMEVLSLCIQRRINCSPCFRYHWRCDQLNLSHLCFADDLL 530

Query: 758  LFGRGDPDSMRVLRDALDEFTVTSGLTINKSKSHIFLGGVRPFEKRAIMELFGFPEGTLP 937
            +F  GD +S+R L DA   F   S L  N S+S IFL GV      +++++  F  GT P
Sbjct: 531  MFCNGDENSVRTLHDAFSNFESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCP 590

Query: 938  VKYLGLPLASKSLTIPDYSPLLAQISNFIQRWSNSNLSSAGWLELIRSVLQGVGCYWLQA 1117
            V+YLG+PL +  L + D SPLL +I   I+ W N  LS AG L+LI+SVL  +  YW   
Sbjct: 591  VRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWASH 650

Query: 1118 LPLPGTVINRITKMLRKFLW---CNSQCL--VSWKTVCLPRGEGGLGLRDLAVWN 1267
            L LP  V+  I K LR FLW   C+ +    V+W  +CLP+ EGGLG++DL  WN
Sbjct: 651  LILPKKVLKDIEKRLRCFLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWN 705



 Score = 30.4 bits (67), Expect(2) = 4e-72
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +1

Query: 1252 LGCVEQSLHSKTLWNIHAKTDSLWIKWIHAEYLRG*DIW 1368
            L C  ++L    +WN+ + + + W  W+    L+G   W
Sbjct: 701  LHCWNKALMISHIWNLVSSSSNFWTDWVKVYLLKGNSFW 739



 Score = 89.4 bits (220), Expect = 8e-15
 Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
 Frame = +1

Query: 1   IRTALFDIGDEKAPGPDGYTSAFFKKNWDLVRDDVVAS-VDEFFSK*IILRKLNHTVVSL 177
           IR   F +   K+PGPDG+   FF+K W ++ D+VVA+ V EFFS   +L +LN T+++L
Sbjct: 278 IRAVFFSMNPNKSPGPDGFNGCFFQKAWLVIGDNVVAAAVKEFFSYGSLLMELNSTIITL 337

Query: 178 IPKTTHDPGVGDFRPIACTNVVYKIITKNSNF*NGTFFAETHLSGSICLYQGPNYYG*FL 357
           +PK  +   + DFRPI+C N  YKII K              L G++ L  GP+    F+
Sbjct: 338 VPKVANPTTMSDFRPISCCNTFYKIIAK---------LLANRLKGTLHLIVGPS-QSTFI 387

Query: 358 PCPGAHQNVREEEWYHCTLH 417
           P      N+   +   C  H
Sbjct: 388 PGRRIGDNILLAQEIICDYH 407


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  262 bits (670), Expect(2) = 2e-71
 Identities = 140/354 (39%), Positives = 204/354 (57%), Gaps = 5/354 (1%)
 Frame = +2

Query: 221  PLLALMLFIK*SQKILISRMALFLQKLISLAQSVFIKGRTIMDNFYLAQELIRTYERKSG 400
            P+       K   K+L  R+   L   IS +QS F+KGR + +N  LA EL++ + + + 
Sbjct: 524  PISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQ-AN 582

Query: 401  ITARCMVKIDLRKAYDCISWDFLRDVLHGLNFHPCFVYWILTYVISATFSITINGGSHGF 580
            I++R ++K+DLRKA+D + W F+ + L   N  P FV WI   + S +FSI ++G   G+
Sbjct: 583  ISSRGVLKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSINVSGSLCGY 642

Query: 581  VRGKRGLRQGDPMSPTLFLFCMEYLSRLIHARTHDSTFMHHPKCSTTDTTHLAFADDLLL 760
             +G +GLRQGDP+SP+LF+  ME LSRL+  +  D +  +HPK S    + LAFADDL++
Sbjct: 643  FKGSKGLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISSLAFADDLMI 702

Query: 761  FGRGDPDSMRVLRDALDEFTVTSGLTINKSKSHIFLGGVRPFEKRAIMELFGFPEGTLPV 940
            F  G   S+R ++  L+ F   SGL +N  KS ++  G+   +K   +  FGF  GT P 
Sbjct: 703  FYDGKASSLRGIKSVLESFKNLSGLEMNTEKSAVYTAGLEDTDKEDTL-AFGFVNGTFPF 761

Query: 941  KYLGLPLASKSLTIPDYSPLLAQISNFIQRWSNSNLSSAGWLELIRSVLQGVGCYWLQAL 1120
            +YLGLPL  + L   DYS L+ +I+     W+   LS AG L+LI SV+     +WL + 
Sbjct: 762  RYLGLPLLHRKLRRSDYSQLIDKIAARFNHWATKTLSFAGRLQLISSVIYSTVNFWLSSF 821

Query: 1121 PLPGTVINRITKMLRKFLWCN-----SQCLVSWKTVCLPRGEGGLGLRDLAVWN 1267
             LP   +  I +M  +FLW N         VSW+  CLP+ EGGLGLR+   WN
Sbjct: 822  ILPKCCLKTIEQMCNRFLWGNDITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWN 875



 Score = 36.6 bits (83), Expect(2) = 2e-71
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +1

Query: 1267 QSLHSKTLWNIHAKTDSLWIKWIHAEYLRG*DIW 1368
            ++L+ + +W + A+ DSLW+ W HA  LR  + W
Sbjct: 876  KTLNLRLIWMLFARRDSLWVAWNHANRLRHVNFW 909



 Score = 88.6 bits (218), Expect = 1e-14
 Identities = 38/87 (43%), Positives = 58/87 (66%)
 Frame = +1

Query: 1   IRTALFDIGDEKAPGPDGYTSAFFKKNWDLVRDDVVASVDEFFSK*IILRKLNHTVVSLI 180
           I++  F +   K+PGPDGYTS FFKK W +V   ++A+V EFF    +L + N T V+++
Sbjct: 451 IKSEFFALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMV 510

Query: 181 PKTTHDPGVGDFRPIACTNVVYKIITK 261
           PK  +   + +FRPI+C N +YK+I+K
Sbjct: 511 PKKPNADRITEFRPISCCNAIYKVISK 537


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  276 bits (705), Expect = 5e-71
 Identities = 185/581 (31%), Positives = 274/581 (47%), Gaps = 44/581 (7%)
 Frame = +2

Query: 221  PLLALMLFIK*SQKILISRMALFLQKLISLAQSVFIKGRTIMDNFYLAQELIRTYERKSG 400
            P+       K   KIL  R+   + +++  AQ+ FI  R I DN  LA ELIR Y R+  
Sbjct: 519  PIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRH- 577

Query: 401  ITARCMVKIDLRKAYDCISWDFLRDVLHGLNFHPCFVYWILTYVISATFSITINGGSHGF 580
            ++ RC++K+D+RKAYD + W FL  +L  L F   F+ WI+  V + ++SI +NG     
Sbjct: 578  VSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIP 637

Query: 581  VRGKRGLRQGDPMSPTLFLFCMEYLSRLIHARTHDSTFMHHPKCSTTDTTHLAFADDLLL 760
               ++GLRQGDP+SP LF   MEYLSR +     D  F  HPKC     THL FADDLL+
Sbjct: 638  FDAQKGLRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLM 697

Query: 761  FGRGDPDSMRVLRDALDEFTVTSGLTINKSKSHIFLGGVRPFEKRAIMELFGFPEGTLPV 940
            F R D  S+  +  A + F+  SGL  +  KS I+ GGV   E   + +    P G+LP 
Sbjct: 698  FARADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPF 757

Query: 941  KYLGLPLASKSLTIPDYSPLLAQISNFIQRWSNSNLSSAGWLELIRSVLQGVGCYWLQAL 1120
            +YLG+PLASK L      PL+ +I+   Q W    LS AG L+L++++L  +  YW Q  
Sbjct: 758  RYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIF 817

Query: 1121 PLPGTVINRITKMLRKFLWCNS-----QCLVSWKTVCLPRGEGGLGLRDLAVWNNP---- 1273
            PLP  +I  +    RKFLW  +     +  V+W  +  P+  GGL + ++ +WN      
Sbjct: 818  PLPKKLIKAVETTCRKFLWTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILK 877

Query: 1274 ------------FIRRPCGTYMPKQ----TPFGSNGS----TLSTSEDRTFGKGTSEA-- 1387
                        ++R     Y+ +Q        SN S     +  S +     G  EA  
Sbjct: 878  LLWAITFKQDKLWVRWVNAYYIKRQNIENVTVSSNTSWILRKIFESRELLTRTGGWEAVS 937

Query: 1388 ----------YEHFRAKGEKKFWYKAVWRSYIPPKFSVTLWLALHGRLKTFDRMK--YSD 1531
                      Y+  +   E   W + +  +   PK    LWLA+  RL T +R+     D
Sbjct: 938  NHMNFSIKKTYKLLQEDYENVVWKRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRD 997

Query: 1532 IARGCVLCESTDETHDHLFFKFEKALAVWSGICSWLRCRNQMTTIPSVVRRFQREKAGSG 1711
            ++  C +C +  ET  HLFF    +  +W  +  +L  + Q        +    +KA S 
Sbjct: 998  VSPLCKMCGNEIETIQHLFFNCIYSKEIWGKVLLYLNLQPQADA--QAKKELAIKKARST 1055

Query: 1712 IIRKAKWVAL-GATVQYLWHARNLKYVEKKPFEASHVIKEI 1831
              R   +V +   +V  +W  RN K         +  +K I
Sbjct: 1056 KDRNKLYVMMFTESVYAIWLLRNAKVFRGIEINQNQAVKSI 1096



 Score = 80.5 bits (197), Expect = 4e-12
 Identities = 38/87 (43%), Positives = 55/87 (63%)
 Frame = +1

Query: 1   IRTALFDIGDEKAPGPDGYTSAFFKKNWDLVRDDVVASVDEFFSK*IILRKLNHTVVSLI 180
           I  AL DI D KAPG DG+ S FFKK+W +++ ++   + +FF    + + +N T V+LI
Sbjct: 446 IDQALADIDDTKAPGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLI 505

Query: 181 PKTTHDPGVGDFRPIACTNVVYKIITK 261
           PK        D+RPIAC + +YKII+K
Sbjct: 506 PKIDEAKHAKDYRPIACCSTLYKIISK 532


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  264 bits (674), Expect(2) = 1e-70
 Identities = 144/367 (39%), Positives = 209/367 (56%), Gaps = 5/367 (1%)
 Frame = +2

Query: 185  RRLMTRELEISGPLLALMLFIK*SQKILISRMALFLQKLISLAQSVFIKGRTIMDNFYLA 364
            ++   RE++   P+    +  K   KI+ +R+ L L K I+  QS F+K R +++N  LA
Sbjct: 519  KKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLA 578

Query: 365  QELIRTYERKSGITARCMVKIDLRKAYDCISWDFLRDVLHGLNFHPCFVYWILTYVISAT 544
             EL++ Y  K  I+ RC +KID+ KA+D + W FL +V   L F   F++WI   + +A+
Sbjct: 579  TELVKDYH-KDTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTAS 637

Query: 545  FSITINGGSHGFVRGKRGLRQGDPMSPTLFLFCMEYLSRLIHARTHDSTFMHHPKCSTTD 724
            FS+ +NG   G+ +  RGLRQG  +SP LF+ CM+ LS+++        F +HPKC T  
Sbjct: 638  FSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMG 697

Query: 725  TTHLAFADDLLLFGRGDPDSMRVLRDALDEFTVTSGLTINKSKSHIFLGGVRPFEKRAIM 904
             THL+FADDL++   G   S+  +    DEF   SGL I+  KS ++L G+    +  + 
Sbjct: 698  LTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVA 757

Query: 905  ELFGFPEGTLPVKYLGLPLASKSLTIPDYSPLLAQISNFIQRWSNSNLSSAGWLELIRSV 1084
            + F F  G LPV+YLGLPL +K L+  D  PLL Q+   I  W++  LS AG L LI SV
Sbjct: 758  DRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSV 817

Query: 1085 LQGVGCYWLQALPLPGTVINRITKMLRKFLWC-----NSQCLVSWKTVCLPRGEGGLGLR 1249
            L  +  +WL A  LP   I  + KM   FLW      +++  +SW  VC P+ EGGLGLR
Sbjct: 818  LWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLR 877

Query: 1250 DLAVWNN 1270
             L   N+
Sbjct: 878  SLKEAND 884



 Score = 32.7 bits (73), Expect(2) = 1e-70
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 1282 KTLWNIHAKTDSLWIKWIHAEYLRG*DIW 1368
            K +W I + ++SLW+KW+    LR    W
Sbjct: 889  KLVWKIVSHSNSLWVKWVDQHLLRNASFW 917



 Score = 93.2 bits (230), Expect = 6e-16
 Identities = 40/87 (45%), Positives = 61/87 (70%)
 Frame = +1

Query: 1   IRTALFDIGDEKAPGPDGYTSAFFKKNWDLVRDDVVASVDEFFSK*IILRKLNHTVVSLI 180
           IR  LF +  +K+PGPDGYTS FFK  W+++ D+   +V  FF+K  + + +N T+++LI
Sbjct: 458 IRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALI 517

Query: 181 PKTTHDPGVGDFRPIACTNVVYKIITK 261
           PK T    + D+RPI+C NV+YK+I+K
Sbjct: 518 PKKTEAREMKDYRPISCCNVLYKVISK 544



 Score = 79.3 bits (194), Expect = 9e-12
 Identities = 61/237 (25%), Positives = 96/237 (40%), Gaps = 26/237 (10%)
 Frame = +2

Query: 1232 GGLGLRDLAV---------WNNPFIRRPCG-TYMPKQTPFGSNGSTLSTSEDRTFGKGTS 1381
            G  GL DL +         W N   RR     Y   +     +  T + +ED+   +G S
Sbjct: 972  GDRGLIDLGISRRMTVEEAWTNRRQRRHRNDVYNVIEDALKKSWDTRTETEDKVLWRGKS 1031

Query: 1382 EAYE----------HFRAKGEKKFWYKAVWRSYIPPKFSVTLWLALHGRLKTFDRM--KY 1525
            + +           H R+   +  W+K +W S+  PK+S   WLA HGRL T DRM    
Sbjct: 1032 DVFRTTFSTRDTWHHTRSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWA 1091

Query: 1526 SDIARGCVLCESTDETHDHLFFKFEKALAVWSGICSWLRCRNQMTTIPSVVRRFQREKAG 1705
            + IA  C+ C+ T ET DHLFF       +W  +   +      +   S++      +  
Sbjct: 1092 NGIATDCIFCQGTLETRDHLFFTCSFTSVIWVDLARGIFKTQYTSHWQSIIEAITNSQH- 1150

Query: 1706 SGIIRKAKW----VALGATVQYLWHARNLKYVEKKPFEASHVIKEIKLDVYRVLYSL 1864
                 + +W        AT+  +W  RN +   + P  AS ++  I   +   L S+
Sbjct: 1151 ----HRVEWFLRRYVFQATIYIVWRERNGRRHGEPPNTASQLVGWIDKQIRNQLSSI 1203


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
            72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  271 bits (693), Expect = 1e-69
 Identities = 178/562 (31%), Positives = 271/562 (48%), Gaps = 10/562 (1%)
 Frame = +2

Query: 200  RELEISGPLLALMLFIK*SQKILISRMALFLQKLISLAQSVFIKGRTIMDNFYLAQELIR 379
            +E++   P+    +  K   KI+ +R+ L L K I   QS F+K R +++N  LA E+++
Sbjct: 412  KEMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVK 471

Query: 380  TYERKSGITARCMVKIDLRKAYDCISWDFLRDVLHGLNFHPCFVYWILTYVISATFSITI 559
             Y + S +++RC +KID+ KA+D + W FL +VL  +NF P F +WI   + +A+FS+ +
Sbjct: 472  DYHKDS-VSSRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQV 530

Query: 560  NGGSHGFVRGKRGLRQGDPMSPTLFLFCMEYLSRLIHARTHDSTFMHHPKCSTTDTTHLA 739
            NG   G     R LRQG  +SP LF+  M+ LS+++        F +HPKC     THL+
Sbjct: 531  NGELAGVFSSARELRQGCSLSPYLFVISMDVLSKMLDKAVGARQFGYHPKCRAIGLTHLS 590

Query: 740  FADDLLLFGRGDPDSMRVLRDALDEFTVTSGLTINKSKSHIFLGGVRPFEKRAIMELFGF 919
            FADDL++   G   S+  +   L EF   SGL I+  KS ++L GV+    + I++ F F
Sbjct: 591  FADDLMILSDGKVRSIDGIVKVLYEFAKWSGLKISMEKSTMYLAGVQASVYQEIVQKFSF 650

Query: 920  PEGTLPVKYLGLPLASKSLTIPDYSPLLAQISNFIQRWSNSNLSSAGWLELIRSVLQGVG 1099
              G LPV+YLGLPL SK LT  D  PL+ Q+   I+ W++  LS AG L LI S L  + 
Sbjct: 651  DVGKLPVRYLGLPLVSKRLTASDCLPLIEQLRKKIEAWTSRFLSFAGRLNLISSTLWSIC 710

Query: 1100 CYWLQALPLPGTVINRITKMLRKFLW-----CNSQCLVSWKTVCLPRGEGGLGLRDLAVW 1264
             +W+ A  LP   I  I K+   FLW      +++  VSW+ +C P+ E          W
Sbjct: 711  NFWMAAFRLPRACIREIDKLCSAFLWSGTELSSNKAKVSWEAICKPKKE---------AW 761

Query: 1265 NNPFIRRPCGTYMPKQTPFGSNGSTLSTSEDRTFGKGTSEAYEHFRAKGEKKFWYKAVWR 1444
            +        G +   +TP                                          
Sbjct: 762  HK-------GVWFAHETP------------------------------------------ 772

Query: 1445 SYIPPKFSVTLWLALHGRLKTFDRMKYSDI--ARGCVLCESTDETHDHLFFKFEKALAVW 1618
                 K S  +WLA+  +L T  RM++ ++  + GCVLC +  ET DHLFF       +W
Sbjct: 773  -----KHSFCVWLAIWNKLSTGQRMQHWNLQSSVGCVLCNNNLETRDHLFFSCAYTSGIW 827

Query: 1619 SGICSWLRCRNQMT---TIPSVVRRFQREKAGSGIIRKAKWVALGATVQYLWHARNLKYV 1789
              +   L  R+  T   TI S V     ++    + R      L A+V  +W  RN +  
Sbjct: 828  EALAKNLLQRSYTTDWQTIISYVSGQCHDRVSCFLARS----VLQASVYTIWRERNGRRH 883

Query: 1790 EKKPFEASHVIKEIKLDVYRVL 1855
             + P  A+ +I+ I   +  +L
Sbjct: 884  GETPNPAARLIQWIDKHIRNML 905



 Score = 83.2 bits (204), Expect = 6e-13
 Identities = 33/87 (37%), Positives = 60/87 (68%)
 Frame = +1

Query: 1   IRTALFDIGDEKAPGPDGYTSAFFKKNWDLVRDDVVASVDEFFSK*IILRKLNHTVVSLI 180
           I   +F + ++K+PGPDGYT+ F+K  W+++  + + ++  FF+K  + + +N T+++LI
Sbjct: 346 IHKVVFSMPNDKSPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALI 405

Query: 181 PKTTHDPGVGDFRPIACTNVVYKIITK 261
           PK      + D+RPI+C NV+YK+I+K
Sbjct: 406 PKKKEAKEMKDYRPISCCNVLYKVISK 432


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  259 bits (662), Expect(2) = 2e-69
 Identities = 140/365 (38%), Positives = 212/365 (58%), Gaps = 10/365 (2%)
 Frame = +2

Query: 191  LMTRELEISG-----PLLALMLFIK*SQKILISRMALFLQKLISLAQSVFIKGRTIMDNF 355
            L++++ E+SG     P+    +  K   K++ +R+   L   I+  QS FIK R +M+N 
Sbjct: 663  LISKKHEVSGMKDYRPISCCNVLYKIVSKLMANRLKEILPASIAPNQSAFIKDRLMMENL 722

Query: 356  YLAQELIRTYERKSGITARCMVKIDLRKAYDCISWDFLRDVLHGLNFHPCFVYWILTYVI 535
             LA EL++ Y ++S I++R  +KID+ KA+D + W FL +VL  ++    F++WI   + 
Sbjct: 723  LLASELVKDYHKES-ISSRSALKIDISKAFDFVQWPFLINVLKAIHLPEMFIHWIELCIG 781

Query: 536  SATFSITINGGSHGFVRGKRGLRQGDPMSPTLFLFCMEYLSRLIHARTHDSTFMHHPKCS 715
            +A+FS+ +NG   GF R +RGLRQG  +SP L++ CM  LS ++     +    +HP+C 
Sbjct: 782  TASFSVQVNGELSGFFRSERGLRQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPRCR 841

Query: 716  TTDTTHLAFADDLLLFGRGDPDSMRVLRDALDEFTVTSGLTINKSKSHIFLGGVRPFEKR 895
              + THL FADD+++F  G   S++      ++F   S L I+  KS IF+ G+ P  K 
Sbjct: 842  NMNLTHLCFADDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKT 901

Query: 896  AIMELFGFPEGTLPVKYLGLPLASKSLTIPDYSPLLAQISNFIQRWSNSNLSSAGWLELI 1075
            +I++ F F  GTLPVKYLGLPL +K +T  DY PL+ +I   I  W+N  LS AG L+LI
Sbjct: 902  SILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLI 961

Query: 1076 RSVLQGVGCYWLQALPLPGTVINRITKMLRKFLWC-----NSQCLVSWKTVCLPRGEGGL 1240
            +SVL  +  +WL    LP   +  I KM   FLW        +  ++W  VC  + EGGL
Sbjct: 962  KSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEGGL 1021

Query: 1241 GLRDL 1255
            GL+ L
Sbjct: 1022 GLKPL 1026



 Score = 33.1 bits (74), Expect(2) = 2e-69
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 1282 KTLWNIHAKTDSLWIKWIHAEYLRG*DIW 1368
            K +W I +  DSLW+KW++   +R    W
Sbjct: 1036 KLIWRILSARDSLWVKWVNKHLIRKETFW 1064



 Score = 78.2 bits (191), Expect = 2e-11
 Identities = 37/83 (44%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
 Frame = +1

Query: 19  DIGDE--KAPGPDGYTSAFFKKNWDLVRDDVVASVDEFFSK*IILRKLNHTVVSLIPKTT 192
           DI +E  K+PGPDGYT  FFK  W ++  D+V ++  FF K  + + +N T+++LI K  
Sbjct: 609 DIKEEAHKSPGPDGYTVEFFKTAWPVLGRDLVIAIQSFFLKGFLPKGINTTILALISKKH 668

Query: 193 HDPGVGDFRPIACTNVVYKIITK 261
              G+ D+RPI+C NV+YKI++K
Sbjct: 669 EVSGMKDYRPISCCNVLYKIVSK 691



 Score = 63.9 bits (154), Expect = 4e-07
 Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 22/158 (13%)
 Frame = +2

Query: 1232 GGLGLRDLAVWNNPFIRRPCGTYMPKQ----------TPFGSNGSTLSTSEDRTFGK--- 1372
            G  G  DL + NN  +     T+  K+          +         ST  DR+  K   
Sbjct: 1119 GSRGTIDLGIPNNATVAEVMNTHRRKRHRADFLNQIKSQIELARQDRSTDGDRSLWKQKE 1178

Query: 1373 -------GTSEAYEHFRAKGEKKFWYKAVWRSYIPPKFSVTLWLALHGRLKTFDRM-KYS 1528
                    +S+ ++  R+   +  WY+ VW S   PK+S   WLA H RL T D++ K++
Sbjct: 1179 DTFKSSFSSSKTWQQIRSISLRCDWYRGVWFSASTPKYSFVTWLAFHNRLTTSDKICKWN 1238

Query: 1529 DIAR-GCVLCESTDETHDHLFFKFEKALAVWSGICSWL 1639
              AR  CV C    ET DHLFF    +  VW  +   L
Sbjct: 1239 SGARYDCVFCGEELETRDHLFFSCPYSSHVWFSLTKGL 1276


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  265 bits (678), Expect(2) = 4e-69
 Identities = 142/360 (39%), Positives = 201/360 (55%), Gaps = 5/360 (1%)
 Frame = +2

Query: 203  ELEISGPLLALMLFIK*SQKILISRMALFLQKLISLAQSVFIKGRTIMDNFYLAQELIRT 382
            E++   P+    +  K   KIL +R+ L L   I   QS F+K R +M+N  LA EL++ 
Sbjct: 822  EMKDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKD 881

Query: 383  YERKSGITARCMVKIDLRKAYDCISWDFLRDVLHGLNFHPCFVYWILTYVISATFSITIN 562
            Y ++S +T RC +KID+ KA+D + W FL + L  LNF   F +WI   + +ATFS+ +N
Sbjct: 882  YHKES-VTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVN 940

Query: 563  GGSHGFVRGKRGLRQGDPMSPTLFLFCMEYLSRLIHARTHDSTFMHHPKCSTTDTTHLAF 742
            G   GF    RGLRQG  +SP LF+ CM  LS +I          +HPKC     THL F
Sbjct: 941  GELAGFFGSSRGLRQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCF 1000

Query: 743  ADDLLLFGRGDPDSMRVLRDALDEFTVTSGLTINKSKSHIFLGGVRPFEKRAIMELFGFP 922
            ADDL++F  G   S+  + +   EF   SGL I+  KS I+L GV   ++   +  F F 
Sbjct: 1001 ADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFA 1060

Query: 923  EGTLPVKYLGLPLASKSLTIPDYSPLLAQISNFIQRWSNSNLSSAGWLELIRSVLQGVGC 1102
             G LPV+YLGLPL +K +T  DYSPL+  +   I  W+  +LS AG L L+ SV+  +  
Sbjct: 1061 NGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIAN 1120

Query: 1103 YWLQALPLPGTVINRITKMLRKFLWCN-----SQCLVSWKTVCLPRGEGGLGLRDLAVWN 1267
            +W+ A  LP   I  I K+   FLW        +  ++W ++C P+ EGGLG++ LA  N
Sbjct: 1121 FWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEAN 1180



 Score = 26.2 bits (56), Expect(2) = 4e-69
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 1282 KTLWNIHAKTDSLWIKWIHAEYLRG*DIW*RN 1377
            K +W + +   SLW+ WI    +R    W  N
Sbjct: 1186 KLIWRLLSTQPSLWVTWIWTFIIRKGTFWSAN 1217



 Score = 88.2 bits (217), Expect = 2e-14
 Identities = 40/87 (45%), Positives = 58/87 (66%)
 Frame = +1

Query: 1    IRTALFDIGDEKAPGPDGYTSAFFKKNWDLVRDDVVASVDEFFSK*IILRKLNHTVVSLI 180
            I+  LF + + K+PGPDGYTS FFK  W L   D +A++  FF K  + + LN T+++LI
Sbjct: 755  IQKVLFAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALI 814

Query: 181  PKTTHDPGVGDFRPIACTNVVYKIITK 261
            PK      + D+RPI+C NV+YK+I+K
Sbjct: 815  PKKDEAIEMKDYRPISCCNVLYKVISK 841



 Score = 68.6 bits (166), Expect = 2e-08
 Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
 Frame = +2

Query: 1376 TSEAYEHFRAKGEKKFWYKAVWRSYIPPKFSVTLWLALHGRLKTFDRMKYSDIAR--GCV 1549
            T   + + R    ++ WYK VW  Y  PK+S  LWL +  RL T DR+K  +  +   C 
Sbjct: 1338 TKVTWNNVRTHQPQQNWYKGVWFPYSTPKYSFLLWLTVQNRLSTGDRIKAWNSGQLVTCT 1397

Query: 1550 LCESTDETHDHLFFKFEKALAVWSGICSWLRCRN 1651
            LC + +ET DHLFF  +    VW  +   L   N
Sbjct: 1398 LCNNAEETRDHLFFSCQYTSYVWEALTQRLLSTN 1431


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  269 bits (687), Expect = 6e-69
 Identities = 142/361 (39%), Positives = 210/361 (58%), Gaps = 6/361 (1%)
 Frame = +2

Query: 221  PLLALMLFIK*SQKILISRMALFLQKLISLAQSVFIKGRTIMDNFYLAQELIRTYERKSG 400
            P+  L    K   K+L SR+   L  +I  +QS F+ GR++ +N  LA E++  Y R + 
Sbjct: 385  PISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLN- 443

Query: 401  ITARCMVKIDLRKAYDCISWDFLRDVLHGLNFHPCFVYWILTYVISATFSITINGGSHGF 580
            I+ R M+K+DL+KA+D + W+F+   L  L     ++ WI   + + +F+I++NG + GF
Sbjct: 444  ISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGF 503

Query: 581  VRGKRGLRQGDPMSPTLFLFCMEYLSRLIHARTHDSTFMH-HPKCSTTDTTHLAFADDLL 757
             R  +GLRQGDP+SP LF+  ME  S+L+++R +DS ++H HPK      +HL FADD++
Sbjct: 504  FRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSR-YDSGYIHYHPKAGDLSISHLMFADDVM 562

Query: 758  LFGRGDPDSMRVLRDALDEFTVTSGLTINKSKSHIFLGGVRPFEKRAIMELFGFPEGTLP 937
            +F  G   SM  + + LD+F   SGL +NK KS +F  G+    +R     +GFP GT P
Sbjct: 563  IFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGL-DLSERITSAAYGFPAGTFP 621

Query: 938  VKYLGLPLASKSLTIPDYSPLLAQISNFIQRWSNSNLSSAGWLELIRSVLQGVGCYWLQA 1117
            ++YLGLPL  + L I DY PLL ++S  ++ W +  LS AG  +LI SV+ G+  +W+  
Sbjct: 622  IRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMST 681

Query: 1118 LPLPGTVINRITKMLRKFLWCNS-----QCLVSWKTVCLPRGEGGLGLRDLAVWNNPFIR 1282
              LP   I +I  +  KFLW  S        VSW   CLP+ EGGLG R    WN   + 
Sbjct: 682  FLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLL 741

Query: 1283 R 1285
            R
Sbjct: 742  R 742



 Score = 78.6 bits (192), Expect = 1e-11
 Identities = 34/87 (39%), Positives = 56/87 (64%)
 Frame = +1

Query: 1   IRTALFDIGDEKAPGPDGYTSAFFKKNWDLVRDDVVASVDEFFSK*IILRKLNHTVVSLI 180
           I+ A   +   K  GPDGY+  FF+  W ++  +V+A++ EFF    +L++ N T + LI
Sbjct: 312 IKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLI 371

Query: 181 PKTTHDPGVGDFRPIACTNVVYKIITK 261
           PKT++   + +FRPI+C N +YK+I+K
Sbjct: 372 PKTSNACTISEFRPISCLNTLYKVISK 398


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  269 bits (687), Expect = 6e-69
 Identities = 142/361 (39%), Positives = 210/361 (58%), Gaps = 6/361 (1%)
 Frame = +2

Query: 221  PLLALMLFIK*SQKILISRMALFLQKLISLAQSVFIKGRTIMDNFYLAQELIRTYERKSG 400
            P+  L    K   K+L SR+   L  +I  +QS F+ GR++ +N  LA E++  Y R + 
Sbjct: 385  PISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLN- 443

Query: 401  ITARCMVKIDLRKAYDCISWDFLRDVLHGLNFHPCFVYWILTYVISATFSITINGGSHGF 580
            I+ R M+K+DL+KA+D + W+F+   L  L     ++ WI   + + +F+I++NG + GF
Sbjct: 444  ISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGF 503

Query: 581  VRGKRGLRQGDPMSPTLFLFCMEYLSRLIHARTHDSTFMH-HPKCSTTDTTHLAFADDLL 757
             R  +GLRQGDP+SP LF+  ME  S+L+++R +DS ++H HPK      +HL FADD++
Sbjct: 504  FRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSR-YDSGYIHYHPKAGDLSISHLMFADDVM 562

Query: 758  LFGRGDPDSMRVLRDALDEFTVTSGLTINKSKSHIFLGGVRPFEKRAIMELFGFPEGTLP 937
            +F  G   SM  + + LD+F   SGL +NK KS +F  G+    +R     +GFP GT P
Sbjct: 563  IFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGL-DLSERITSAAYGFPAGTFP 621

Query: 938  VKYLGLPLASKSLTIPDYSPLLAQISNFIQRWSNSNLSSAGWLELIRSVLQGVGCYWLQA 1117
            ++YLGLPL  + L I DY PLL ++S  ++ W +  LS AG  +LI SV+ G+  +W+  
Sbjct: 622  IRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMST 681

Query: 1118 LPLPGTVINRITKMLRKFLWCNS-----QCLVSWKTVCLPRGEGGLGLRDLAVWNNPFIR 1282
              LP   I +I  +  KFLW  S        VSW   CLP+ EGGLG R    WN   + 
Sbjct: 682  FLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLL 741

Query: 1283 R 1285
            R
Sbjct: 742  R 742



 Score = 78.6 bits (192), Expect = 1e-11
 Identities = 34/87 (39%), Positives = 56/87 (64%)
 Frame = +1

Query: 1   IRTALFDIGDEKAPGPDGYTSAFFKKNWDLVRDDVVASVDEFFSK*IILRKLNHTVVSLI 180
           I+ A   +   K  GPDGY+  FF+  W ++  +V+A++ EFF    +L++ N T + LI
Sbjct: 312 IKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLI 371

Query: 181 PKTTHDPGVGDFRPIACTNVVYKIITK 261
           PKT++   + +FRPI+C N +YK+I+K
Sbjct: 372 PKTSNACTISEFRPISCLNTLYKVISK 398


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score =  269 bits (687), Expect = 6e-69
 Identities = 166/492 (33%), Positives = 247/492 (50%), Gaps = 52/492 (10%)
 Frame = +2

Query: 299  LISLAQSVFIKGRTIMDNFYLAQELIRTYERKSGITARCMVKIDLRKAYDCISWDFLRDV 478
            + S  Q  F++GR +++N  LA EL+  Y R +  + R M+KIDLRKA+D +SW+F+  +
Sbjct: 4    IFSPNQGAFLEGRLMVENVLLATELVHEYNRPN-TSKRAMLKIDLRKAFDTVSWEFITKI 62

Query: 479  LHGLNFHPCFVYWILTYVISATFSITINGGSHGFVRGKRGLRQGDPMSPTLFLFCMEYLS 658
            +  LN    FV W+   + +  FS++ING   G+ +G+RGLRQGDP+SP LF+  ME LS
Sbjct: 63   MQALNLPRTFVTWVKVCMETPKFSVSINGELAGYFKGRRGLRQGDPLSPYLFIMSMEVLS 122

Query: 659  RLIHARTHDSTFMHHPKCSTTDTTHLAFADDLLLFGRGDPDSMRVLRDALDEFTVTSGLT 838
            R++     +S    HPKC +   THLAFADD+++F  G+  S+  +++ LD F+  SGL 
Sbjct: 123  RMLDRCAAESRLSLHPKCHSPVITHLAFADDIMIFTSGETRSLLEVKNTLDSFSRASGLY 182

Query: 839  INKSKSHIFLGGVRPFEKRAIMELFGFPEGTLPVKYLGLPLASKSLTIPDYSPLLAQISN 1018
            +N  K+ IFL G+   E   +  + GF  G LPV+YLG+ L+   LT  DY PLL ++  
Sbjct: 183  LNTEKTEIFLRGLNGTEASTLCAVIGFTRGYLPVRYLGVSLSPVRLTKSDYQPLLDRVKA 242

Query: 1019 FIQRWSNSNLSSAGWLELIRSVLQGVGCYWLQALPLPGTVINRITKMLRKFLW-CNSQCL 1195
             I  W+   LS AG L+L+ +V+ G+   W     LP     ++ ++   FLW   +   
Sbjct: 243  KINSWTTRYLSYAGRLQLVGTVIYGMVNAWGMIFMLPKFFTKQVDRLCAGFLWGAGTTHR 302

Query: 1196 VSWKTVCLPRGEGGLGLRDLAVWN-NPF-----------------IRRPCG--------- 1294
            VSW T C PR EGGLGLR +A +N +P+                 +R P           
Sbjct: 303  VSWDTCCRPRKEGGLGLRKIAEFNQDPWTIYGSLLRYVGLTGPRSLRIPLPSSVSQAVAG 362

Query: 1295 --------------------TYMPKQTPFGSNGSTLSTSEDRTFGK--GTSEAYEHFRAK 1408
                                + +P  +P G + S L   ++  F     +S  +   R  
Sbjct: 363  DSWIFPGVRSDRLQQVLAHISTIPPPSPDGPSDSALWKYKEEDFRPYFSSSRTWNLTRTV 422

Query: 1409 GEKKFWYKAVWRSYIPPKFSVTLWLALHGRLKTFDRMKYSDIARG--CVLCESTDETHDH 1582
                 W   VW     P+ +   W  +  RL T DR++   I     C LC+  DE+H H
Sbjct: 423  HVIAPWSSIVWFPLAIPRHAFLHWQVMLFRLPTKDRLQQWGITSDATCRLCDGEDESHQH 482

Query: 1583 LFFKFEKALAVW 1618
            LFF    A  +W
Sbjct: 483  LFFGCTYASHLW 494


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  258 bits (658), Expect(2) = 7e-68
 Identities = 142/357 (39%), Positives = 202/357 (56%), Gaps = 5/357 (1%)
 Frame = +2

Query: 200  RELEISGPLLALMLFIK*SQKILISRMALFLQKLISLAQSVFIKGRTIMDNFYLAQELIR 379
            RE++   P+    +  K   KIL +R+   L K I   QS F+K R +++N  LA EL++
Sbjct: 245  REIKDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVK 304

Query: 380  TYERKSGITARCMVKIDLRKAYDCISWDFLRDVLHGLNFHPCFVYWILTYVISATFSITI 559
             Y + S I+ RC +KID+ KA+D + W FL  VL  +NF   F++WI   + +A+FSI +
Sbjct: 305  DYHKDS-ISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQV 363

Query: 560  NGGSHGFVRGKRGLRQGDPMSPTLFLFCMEYLSRLIHARTHDSTFMHHPKCSTTDTTHLA 739
            NG   G+ R  RGLRQG  +SP LF+  M+ LSR++        F +HP+C T   THL 
Sbjct: 364  NGELAGYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLC 423

Query: 740  FADDLLLFGRGDPDSMRVLRDALDEFTVTSGLTINKSKSHIFLGGVRPFEKRAIMELFGF 919
            FADDL++   G   S+  +   L++F    GL I   K+ ++L GV    ++ +   + F
Sbjct: 424  FADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSF 483

Query: 920  PEGTLPVKYLGLPLASKSLTIPDYSPLLAQISNFIQRWSNSNLSSAGWLELIRSVLQGVG 1099
              G LPV+YLGLPL +K LT  DYSPL+ QI   I  W++  LS AG L LI SVL  + 
Sbjct: 484  GVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSRYLSFAGRLSLINSVLWSIT 543

Query: 1100 CYWLQALPLPGTVINRITKMLRKFLWCN-----SQCLVSWKTVCLPRGEGGLGLRDL 1255
             +W+ A  LP   IN I ++    LW        +  VSW  +C P+ EGGLGL+ L
Sbjct: 544  NFWMNAFRLPRECINEINRISSALLWSGPELNPKKAKVSWDEICKPKKEGGLGLQSL 600



 Score = 29.6 bits (65), Expect(2) = 7e-68
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 1282 KTLWNIHAKTDSLWIKWIHAEYLRG*DIW 1368
            K +W + +  DSLW+KW     L+    W
Sbjct: 610  KLIWRLLSCQDSLWVKWTRMNLLKKESFW 638



 Score = 90.1 bits (222), Expect = 5e-15
 Identities = 36/87 (41%), Positives = 62/87 (71%)
 Frame = +1

Query: 1   IRTALFDIGDEKAPGPDGYTSAFFKKNWDLVRDDVVASVDEFFSK*IILRKLNHTVVSLI 180
           I+  +F +  +K+PGPDGYTS F+K +W+++ D+V+ ++  FF+K  + + +N T+++LI
Sbjct: 179 IKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILALI 238

Query: 181 PKTTHDPGVGDFRPIACTNVVYKIITK 261
           PK      + D+RPI+C NV+YK I+K
Sbjct: 239 PKKKEAREIKDYRPISCCNVLYKAISK 265



 Score = 78.2 bits (191), Expect = 2e-11
 Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
 Frame = +2

Query: 1376 TSEAYEHFRAKGEKKFWYKAVWRSYIPPKFSVTLWLALHGRLKTFDRMK--YSDIARGCV 1549
            T + + H R    ++ W+K VW ++  PKFS   WLA+  RL T DRM    +     CV
Sbjct: 762  TKDTWNHIRTSSNQRAWHKGVWFAHATPKFSFCAWLAIRNRLSTGDRMMTWNNGTPTTCV 821

Query: 1550 LCESTDETHDHLFFKFEKALAVWSGICSWLRCRNQMTTIPSVVRRFQREKAGSGIIRKAK 1729
             C S  ET DHLFF+   +  +W+ I   +  +++ +T  S V  +  +     I     
Sbjct: 822  FCSSPMETRDHLFFQCCYSSEIWTSIAKNV-YKDRFSTKWSAVVNYISDSQPDRIQSFLS 880

Query: 1730 WVALGATVQYLWHARNLKYVEKKPFEASHVIKEI 1831
                  ++  +W  RN +   +K   AS++I++I
Sbjct: 881  RYTFQVSIHSIWRERNSRRHGEKSRSASNLIRQI 914


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  257 bits (657), Expect(2) = 2e-67
 Identities = 137/350 (39%), Positives = 197/350 (56%), Gaps = 5/350 (1%)
 Frame = +2

Query: 221  PLLALMLFIK*SQKILISRMALFLQKLISLAQSVFIKGRTIMDNFYLAQELIRTYERKSG 400
            P+    +  K   KI+ +R+ + L   I   QS F++ R +++N  LA EL++ Y + S 
Sbjct: 104  PISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDS- 162

Query: 401  ITARCMVKIDLRKAYDCISWDFLRDVLHGLNFHPCFVYWILTYVISATFSITINGGSHGF 580
            I+ RC +KID+ KA+D + W FL + L  LNF   F +WI   + +ATFS+ +NG   GF
Sbjct: 163  ISPRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGF 222

Query: 581  VRGKRGLRQGDPMSPTLFLFCMEYLSRLIHARTHDSTFMHHPKCSTTDTTHLAFADDLLL 760
               KRGLRQG  +SP LF+ CM  LS +I          +HPKC     THL FADDL++
Sbjct: 223  FGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMV 282

Query: 761  FGRGDPDSMRVLRDALDEFTVTSGLTINKSKSHIFLGGVRPFEKRAIMELFGFPEGTLPV 940
            F  G   S+  + +   EF   SGL I+  KS ++L GV    +  I+  F F  G LPV
Sbjct: 283  FIDGQQRSVEGVINIFKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPV 342

Query: 941  KYLGLPLASKSLTIPDYSPLLAQISNFIQRWSNSNLSSAGWLELIRSVLQGVGCYWLQAL 1120
            +YLGLPL +K +T  DYSPLL ++ + I  W+  +LS AG L LI SV+  +  +W+ A 
Sbjct: 343  RYLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAY 402

Query: 1121 PLPGTVINRITKMLRKFLWCN-----SQCLVSWKTVCLPRGEGGLGLRDL 1255
             LP   I  I K+   FLW        +  ++W ++C  + EGGLG++ L
Sbjct: 403  RLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSL 452



 Score = 28.5 bits (62), Expect(2) = 2e-67
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +1

Query: 1282 KTLWNIHAKTDSLWIKWIHAEYLRG*DIW*RN 1377
            K +W + ++  SLW+ W+    +R    W  N
Sbjct: 462  KLIWRLVSRQSSLWVNWVWTYIIRKGSFWSAN 493



 Score = 85.1 bits (209), Expect = 2e-13
 Identities = 38/83 (45%), Positives = 54/83 (65%)
 Frame = +1

Query: 13  LFDIGDEKAPGPDGYTSAFFKKNWDLVRDDVVASVDEFFSK*IILRKLNHTVVSLIPKTT 192
           LF +   K PGPDGYTS FFK  W +   D +A++  FF K  + + LN T+++LIPK  
Sbjct: 35  LFAMPSNKFPGPDGYTSEFFKATWSITGQDFIAAIKSFFIKGFLPKGLNATILALIPKKD 94

Query: 193 HDPGVGDFRPIACTNVVYKIITK 261
               + D+RPI+C NV+YK+I+K
Sbjct: 95  EATLMRDYRPISCCNVIYKVISK 117