BLASTX nr result

ID: Mentha23_contig00007717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00007717
         (318 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC06428.1| hypothetical protein L484_004714 [Morus notabilis]      65   7e-09
ref|XP_002514667.1| RNA polymerase-associated protein LEO1, puta...    58   2e-06
ref|XP_004137426.1| PREDICTED: uncharacterized protein LOC101221...    57   3e-06

>gb|EXC06428.1| hypothetical protein L484_004714 [Morus notabilis]
          Length = 621

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 41/108 (37%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
 Frame = +1

Query: 1   RIINAKKV--SKDIPRKSAFQASKSSRRPIDFXXXXXXXXXXXXXXXXXXXXPPRRRHEE 174
           RI+NAKK   S+DIPRKS+   +KSS+RP+DF                    PPRRR EE
Sbjct: 488 RILNAKKSQGSRDIPRKSSLSTAKSSQRPVDFSDSDRGESEYETDGEDDERSPPRRRAEE 547

Query: 175 AEQDYGXXXXXXXXXXXXXXXXXXXXXXXXPKHKARDSRGSLKRKGIE 318
            EQ+Y                         PK + ++S  SLKRKGIE
Sbjct: 548 PEQEYEEEEEEEEYQEEAERNEMSEEEAEEPKLRGKESGHSLKRKGIE 595


>ref|XP_002514667.1| RNA polymerase-associated protein LEO1, putative [Ricinus communis]
           gi|223546271|gb|EEF47773.1| RNA polymerase-associated
           protein LEO1, putative [Ricinus communis]
          Length = 629

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 35/106 (33%), Positives = 48/106 (45%)
 Frame = +1

Query: 1   RIINAKKVSKDIPRKSAFQASKSSRRPIDFXXXXXXXXXXXXXXXXXXXXPPRRRHEEAE 180
           RI+NAKK +KDI RK +  ++KSS+RP++F                    PPR+R EE E
Sbjct: 499 RIMNAKKGNKDILRKPSLPSAKSSKRPVNFSDSEREESEYESDGEEDERSPPRKRVEEPE 558

Query: 181 QDYGXXXXXXXXXXXXXXXXXXXXXXXXPKHKARDSRGSLKRKGIE 318
           Q+Y                         PK +++D  G  KR GIE
Sbjct: 559 QEYEEEEEEREAEAEADGASEEEEEAEEPKQRSKDFGGIRKRMGIE 604


>ref|XP_004137426.1| PREDICTED: uncharacterized protein LOC101221752 [Cucumis sativus]
           gi|449486962|ref|XP_004157455.1| PREDICTED:
           uncharacterized protein LOC101229895 [Cucumis sativus]
          Length = 623

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 41/109 (37%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
 Frame = +1

Query: 1   RIINAKKVSKDIPRKSAFQASKSSRRPIDFXXXXXXXXXXXXXXXXXXXXPPRRRHEEAE 180
           RI+NAKK ++DIPRK +F ASKSS RP+DF                        R EE E
Sbjct: 494 RIMNAKKGTRDIPRKPSFHASKSSGRPVDFSDSDREESEYETEGEDDAPG----RVEEPE 549

Query: 181 QDY---GXXXXXXXXXXXXXXXXXXXXXXXXPKHKARDSRGSLKRKGIE 318
           Q+Y   G                        PKHK RD   S KRKGIE
Sbjct: 550 QEYEEDGEEDDERDEEAEVNEVSDVDEEAEEPKHKVRDYGSSHKRKGIE 598


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