BLASTX nr result

ID: Mentha23_contig00007586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00007586
         (329 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU44416.1| hypothetical protein MIMGU_mgv1a011890mg [Mimulus...    61   2e-07
ref|NP_201515.1| F-box/RNI-like superfamily protein [Arabidopsis...    56   5e-06
ref|XP_002865025.1| F-box family protein [Arabidopsis lyrata sub...    56   5e-06

>gb|EYU44416.1| hypothetical protein MIMGU_mgv1a011890mg [Mimulus guttatus]
          Length = 267

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/40 (65%), Positives = 31/40 (77%)
 Frame = +2

Query: 2   WGMRVPLDCFVGLLTISPALQIRPKEILLHEENLHAWPVY 121
           WGMRVPLD  +GLLTISPALQI+PK +LL +     WP+Y
Sbjct: 228 WGMRVPLDSIIGLLTISPALQIQPKGMLLPDHAYQGWPIY 267


>ref|NP_201515.1| F-box/RNI-like superfamily protein [Arabidopsis thaliana]
           gi|75262475|sp|Q9FH99.1|FB302_ARATH RecName: Full=F-box
           protein At5g67140 gi|10177601|dbj|BAB10948.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|18252175|gb|AAL61920.1| unknown protein [Arabidopsis
           thaliana] gi|21386939|gb|AAM47873.1| unknown protein
           [Arabidopsis thaliana] gi|332010923|gb|AED98306.1|
           F-box/RNI-like superfamily protein [Arabidopsis
           thaliana]
          Length = 228

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 4/40 (10%)
 Frame = +2

Query: 2   WGMRVPLDCFVGLLTISPALQIRPKEILLHEEN----LHA 109
           WG RVP+DCF+ LLTISPALQI+P E+LL+ +N    LHA
Sbjct: 188 WGTRVPVDCFIALLTISPALQIKPMELLLNAQNPPPLLHA 227


>ref|XP_002865025.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310860|gb|EFH41284.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 228

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 4/40 (10%)
 Frame = +2

Query: 2   WGMRVPLDCFVGLLTISPALQIRPKEILLHEEN----LHA 109
           WG RVP+DCF+ LLTISPALQI+P E+LL+ +N    LHA
Sbjct: 188 WGTRVPVDCFIALLTISPALQIKPMELLLNAQNPPPLLHA 227


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