BLASTX nr result

ID: Mentha22_contig00053104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00053104
         (418 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU37527.1| hypothetical protein MIMGU_mgv1a023226mg [Mimulus...    59   7e-07
ref|XP_002519884.1| replication factor A 1, rfa1, putative [Rici...    57   2e-06

>gb|EYU37527.1| hypothetical protein MIMGU_mgv1a023226mg [Mimulus guttatus]
          Length = 710

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
 Frame = -1

Query: 370 NYNQVSSNVAR-EGSVNTSQYGGNQYGGGARYPXXXXXXXXXXXXXXXXXXSANCPSLMT 194
           +Y+ ++SN ++   S   +QYGG+  G G                      SANCPSLM+
Sbjct: 578 SYSGMNSNASQMNSSYGRNQYGGSGSGSGFNQSGSTGMYMSCSSCGGNGHTSANCPSLMS 637

Query: 193 XXXXXXXXXXXXXXXXXXXXXXA------DCFKCKQPGHWARDCPGVTDAPPAY 50
                                        +CFKC Q GHWARDCPG ++A PAY
Sbjct: 638 GPAQSYGTGAGNRATPGGGASSGGGGASGECFKCHQTGHWARDCPGTSNAQPAY 691


>ref|XP_002519884.1| replication factor A 1, rfa1, putative [Ricinus communis]
            gi|223540930|gb|EEF42488.1| replication factor A 1, rfa1,
            putative [Ricinus communis]
          Length = 901

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/114 (35%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
 Frame = -1

Query: 373  MNYNQV--SSNVAREGSVNTSQYG--GNQYGGGARYPXXXXXXXXXXXXXXXXXXSANCP 206
            +N NQV  SS  ARE  + T+Q G  GNQ+  G  YP                   ANCP
Sbjct: 761  LNSNQVGKSSFAAREFGLQTNQVGQYGNQFSAG--YPTHNLSCISCGATSHSS---ANCP 815

Query: 205  SLMTXXXXXXXXXXXXXXXXXXXXXXA--DCFKCKQPGHWARDCPGVTDAPPAY 50
            S +                       A  +C+KC Q GHWARDCPG+ + PPAY
Sbjct: 816  STINAPRQSAGGFYANQPSSLAGSAGAGGECYKCHQVGHWARDCPGLNNIPPAY 869


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