BLASTX nr result

ID: Mentha22_contig00052944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00052944
         (489 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003369780.1| putative ABC transporter, ATP-binding protei...    56   6e-06
gb|EQC26162.1| hypothetical protein SDRG_16014 [Saprolegnia dicl...    55   8e-06

>ref|XP_003369780.1| putative ABC transporter, ATP-binding protein [Trichinella
           spiralis] gi|316966006|gb|EFV50642.1| putative ABC
           transporter, ATP-binding protein [Trichinella spiralis]
          Length = 834

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 40/113 (35%), Positives = 60/113 (53%)
 Frame = +2

Query: 146 RDKSVSNLVNIENFTLQTPFKDKTMLKNTQLLLEPNKRHCLFGRNGTGKTLLFERCADGT 325
           R K++S  VNIE+  L   F  K +L   +L L P KR+ L GRNG GKT L +  + G 
Sbjct: 349 RGKNMSRDVNIES--LDISFGSKKLLTEAKLHLTPGKRYGLVGRNGVGKTTLLKMISGGQ 406

Query: 326 ISGFPAHLNVHHCKEMDHKANPESVLDTVIHSHAFMMTLRKCDAKLKELIEAE 484
           I   P+H+++ H  E +   +   V+D V+ S          D+K ++L+E E
Sbjct: 407 IR-IPSHISILHV-EQEVTGDDTLVIDCVLAS----------DSKRQKLLEEE 447


>gb|EQC26162.1| hypothetical protein SDRG_16014 [Saprolegnia diclina VS20]
          Length = 705

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
 Frame = +2

Query: 122 AQQKIRIERDKSVSNL---VNIENFTLQTPFKDKTMLKNTQLLLEPNKRHCLFGRNGTGK 292
           A + IR+  D S  N    ++++  TL   FK +T+L NT L L   +R+ L G+NG GK
Sbjct: 162 AWEDIRVLPDMSTDNGERDIHVDKVTLS--FKGQTLLSNTNLKLIHGRRYGLIGKNGAGK 219

Query: 293 TLLFERCADGTISGFPAHLNVHHCKEMDHKANPESVLDTVIHSHAFMMTLRKCDAKLKEL 472
           T L    +   I GFP H+ + H ++       ES       +++ +  +  CD +   L
Sbjct: 220 TTLLRFMSHYDIEGFPRHIRMQHVEQ-------ESASKLSTETNSVLSVVLACDYERTLL 272

Query: 473 IEAE 484
           +  E
Sbjct: 273 LNEE 276


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