BLASTX nr result
ID: Mentha22_contig00051434
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00051434
(1178 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 610 e-172
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 597 e-168
emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera] 546 e-153
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera] 514 e-143
dbj|BAA22288.1| polyprotein [Oryza australiensis] 492 e-136
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 485 e-134
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D... 480 e-133
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 479 e-133
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 479 e-133
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 477 e-132
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 466 e-129
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc... 449 e-123
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e... 441 e-121
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc... 426 e-117
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group] 426 e-117
emb|CDF77009.1| hypothetical transposable element-related protei... 415 e-113
emb|CAN67821.1| hypothetical protein VITISV_025855 [Vitis vinifera] 414 e-113
emb|CAN78154.1| hypothetical protein VITISV_032622 [Vitis vinifera] 413 e-113
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl... 408 e-111
emb|CAN64073.1| hypothetical protein VITISV_038270 [Vitis vinifera] 402 e-109
>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 610 bits (1573), Expect = e-172
Identities = 303/392 (77%), Positives = 336/392 (85%)
Frame = -1
Query: 1178 LVAKGYSQEEGIDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIY 999
LVAKGY+Q+EG+DYEETFSPVAMLKSIRILLSIA +YEIWQMDVKTAFLNG ++E IY
Sbjct: 872 LVAKGYTQKEGVDYEETFSPVAMLKSIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIY 931
Query: 998 MQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKIN 819
M QPEGF A+ QEQKVCKL +SIYGLKQASRSWN+RFD IKSYGF+Q++DEPCVYKKI
Sbjct: 932 MVQPEGFIAQDQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIV 991
Query: 818 NGKVTXXXXXXXXXXXIGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLL 639
N V IGNDVE L++VK WL TQFQMKDLGEA YILGI+IVR+RK + L
Sbjct: 992 NSVVAFLILYVDDILLIGNDVEYLTDVKKWLNTQFQMKDLGEAQYILGIQIVRNRKNKTL 1051
Query: 638 ALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSL 459
A+SQASYIDK++ RY+MQ+SKKG LP RHGI LSKEQCPKTPQE E+M IPY+SAVGSL
Sbjct: 1052 AMSQASYIDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSL 1111
Query: 458 MYAMRCTRPDICYAVGIVSRFQSNPGIDHWVAVKNILKYLRRTRNYMLVYCGDKLQLDGY 279
MYAM CTRPDICY+VGIVSR+QSNPG DHW AVKNILKYLRRTRNYMLVY L L GY
Sbjct: 1112 MYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRTRNYMLVYGAKDLILTGY 1171
Query: 278 TDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLK 99
TDSDFQSDKD R+S SGSVFTL GGA+VWRS+KQT ADSTMEAEY+AACEA+KEAVWL+
Sbjct: 1172 TDSDFQSDKDARKSTSGSVFTLNGGAVVWRSVKQTCIADSTMEAEYVAACEAAKEAVWLR 1231
Query: 98 SFLTDLEIVPNMDRPITLYCDNSGAVANSKEP 3
FLTDLE+VPNM PITLYCDNSGAVANSKEP
Sbjct: 1232 KFLTDLEVVPNMHLPITLYCDNSGAVANSKEP 1263
>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 597 bits (1540), Expect = e-168
Identities = 290/392 (73%), Positives = 337/392 (85%)
Frame = -1
Query: 1178 LVAKGYSQEEGIDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIY 999
LVAKG++Q+EG+DYE+TFSPV MLKSIRILLSI A DYEIWQMDVKT FLNG+++E IY
Sbjct: 212 LVAKGFTQKEGVDYEDTFSPVXMLKSIRILLSIXAYYDYEIWQMDVKTXFLNGHLEETIY 271
Query: 998 MQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKIN 819
M QPEGF K QEQKVCKL RSIYGLKQASRSWN+ F+E IKSYGF+Q++ EPCVYK+I
Sbjct: 272 MVQPEGFVVKDQEQKVCKLQRSIYGLKQASRSWNIIFNEAIKSYGFEQNLGEPCVYKQIG 331
Query: 818 NGKVTXXXXXXXXXXXIGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLL 639
KV IGNDVE LS+VK WLA+QFQMKDLGEASYILGI++ RDRK RLL
Sbjct: 332 GDKVVFLVLYVDDILLIGNDVESLSKVKNWLASQFQMKDLGEASYILGIQMTRDRKNRLL 391
Query: 638 ALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSL 459
ALSQA+YIDK+++++ M++SKKG LP+RHG+ LSKEQCPKTPQ+EE M R+PYASAVGSL
Sbjct: 392 ALSQAAYIDKVLVKFAMENSKKGNLPSRHGVHLSKEQCPKTPQDEEKMRRVPYASAVGSL 451
Query: 458 MYAMRCTRPDICYAVGIVSRFQSNPGIDHWVAVKNILKYLRRTRNYMLVYCGDKLQLDGY 279
MYAM CTRPDIC+AVG+VSR+QSNPG+DHWVAVK+ILKYLRRTRNYMLVY G +L GY
Sbjct: 452 MYAMLCTRPDICFAVGVVSRYQSNPGLDHWVAVKHILKYLRRTRNYMLVYSGRELIPIGY 511
Query: 278 TDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLK 99
TDSDFQSD+D R+S S +VFTL GGAI+WRS+KQT ADSTMEAEY+AACEA+KEAVWL+
Sbjct: 512 TDSDFQSDRDSRKSTSEAVFTLGGGAIIWRSVKQTCVADSTMEAEYVAACEAAKEAVWLR 571
Query: 98 SFLTDLEIVPNMDRPITLYCDNSGAVANSKEP 3
FL +LE+VPNM PI LYCDNSGAVAN+KEP
Sbjct: 572 EFLKELEVVPNMHEPIRLYCDNSGAVANAKEP 603
>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
Length = 633
Score = 546 bits (1406), Expect = e-153
Identities = 272/392 (69%), Positives = 321/392 (81%)
Frame = -1
Query: 1178 LVAKGYSQEEGIDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIY 999
LVAKGY+Q+EGIDYEETFSPVAMLKSIRILLSIAA DYEIWQMDVKTAFLNG +DE IY
Sbjct: 177 LVAKGYTQKEGIDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGSLDECIY 236
Query: 998 MQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKIN 819
M+Q EGF GQE +CKL RSIYGLKQASRSWN FD+TIK++GFDQ DE CVYKK N
Sbjct: 237 MKQXEGFIXNGQEHLLCKLNRSIYGLKQASRSWNTCFDQTIKTFGFDQCHDESCVYKKWN 296
Query: 818 NGKVTXXXXXXXXXXXIGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLL 639
KV IGN + +L+ VK WL+ +F MKDLGEA++ILGI+++R+RKK+++
Sbjct: 297 GKKVVFLVLYVDDILLIGNCIGMLTSVKDWLSQRFDMKDLGEAAHILGIKLMRNRKKKMI 356
Query: 638 ALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSL 459
LSQA YID ++ R+ MQ SKKG+LP RHGI LSK+Q PKTP+E E+M +PYASAVGSL
Sbjct: 357 GLSQALYIDTILNRFNMQGSKKGFLPFRHGIXLSKDQSPKTPEEIESMKAVPYASAVGSL 416
Query: 458 MYAMRCTRPDICYAVGIVSRFQSNPGIDHWVAVKNILKYLRRTRNYMLVYCGDKLQLDGY 279
MYAM CTRPDIC+AVG+VSRFQSN G +HW AVK+I+KYL+RTR+YMLV+ + L GY
Sbjct: 417 MYAMLCTRPDICFAVGMVSRFQSNXGREHWXAVKHIIKYLKRTRDYMLVFQSENLXPIGY 476
Query: 278 TDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLK 99
TDSDFQSD+D R+S SG+VF L GGAI WRSIKQT ADSTMEAEY+AA EA+KEAVWL+
Sbjct: 477 TDSDFQSDQDSRKSTSGNVFXLGGGAISWRSIKQTXVADSTMEAEYVAASEAAKEAVWLR 536
Query: 98 SFLTDLEIVPNMDRPITLYCDNSGAVANSKEP 3
+FL DL +VP++ PITLYCDNSGAVANSKEP
Sbjct: 537 NFLLDLGVVPSVQSPITLYCDNSGAVANSKEP 568
>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
Length = 1285
Score = 514 bits (1323), Expect = e-143
Identities = 263/392 (67%), Positives = 307/392 (78%)
Frame = -1
Query: 1178 LVAKGYSQEEGIDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIY 999
LVAKGY+Q+EGIDYEETFSPVAMLKSIRILLSIAA DYEIWQMDVKTAFLNG +DE IY
Sbjct: 855 LVAKGYTQKEGIDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGSLDECIY 914
Query: 998 MQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKIN 819
M+Q EGF GQE +CKL RSIYGLKQASRSWN FD+TIK++GFDQ D CVYKK N
Sbjct: 915 MKQLEGFITNGQEHLLCKLNRSIYGLKQASRSWNTCFDQTIKTFGFDQCHDVSCVYKKWN 974
Query: 818 NGKVTXXXXXXXXXXXIGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLL 639
KV +F MK LGEA++ILGI+++R+RKKR++
Sbjct: 975 GKKVVFL--------------------------RFDMKYLGEAAHILGIKLMRNRKKRMI 1008
Query: 638 ALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSL 459
LSQA YID ++ R+ MQ SKKG+LP RHGIVLSK+Q PKTP+E E+M +PYASAVGSL
Sbjct: 1009 GLSQALYIDTILNRFNMQGSKKGFLPFRHGIVLSKDQSPKTPEEIESMKAVPYASAVGSL 1068
Query: 458 MYAMRCTRPDICYAVGIVSRFQSNPGIDHWVAVKNILKYLRRTRNYMLVYCGDKLQLDGY 279
MYAM CTRPDI +AVG+VSRFQSNPG +HW AVK+I+KYL+RTR+YMLV+ + L GY
Sbjct: 1069 MYAMLCTRPDIYFAVGMVSRFQSNPGREHWTAVKHIIKYLKRTRDYMLVFQSENLVPIGY 1128
Query: 278 TDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLK 99
TDSDFQSD+D R+S SG+VF L GGAI WRSIKQT AD TMEAEY+AA EA+KEAVWL+
Sbjct: 1129 TDSDFQSDQDSRKSTSGNVFVLGGGAISWRSIKQTCVADFTMEAEYVAASEAAKEAVWLR 1188
Query: 98 SFLTDLEIVPNMDRPITLYCDNSGAVANSKEP 3
+FL DL +VP++ PITLYCDNSGAVANSKEP
Sbjct: 1189 NFLLDLGVVPSVQSPITLYCDNSGAVANSKEP 1220
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 492 bits (1266), Expect = e-136
Identities = 240/393 (61%), Positives = 299/393 (76%), Gaps = 1/393 (0%)
Frame = -1
Query: 1178 LVAKGYSQEEGIDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIY 999
LVAKG+ Q +G+DY+ETFSPVAMLKSIRI+L+IAA DYEIWQMDVKTAFLNG + E +Y
Sbjct: 862 LVAKGFKQIQGVDYDETFSPVAMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGNLSEDVY 921
Query: 998 MQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKIN 819
M QP+GF K+CKL +SIYGLKQASRSWN+RFDE IK +GF ++ +E CVYKK++
Sbjct: 922 MIQPQGFVDPESPGKICKLQKSIYGLKQASRSWNIRFDEVIKGFGFIKNEEEACVYKKVS 981
Query: 818 NGKVTXXXXXXXXXXXIGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLL 639
+ IGND+ +L VK L F MKDLGEA+YILGIRI RDR KRL+
Sbjct: 982 GSAIVFLILYVDDILLIGNDIPMLESVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLI 1041
Query: 638 ALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSL 459
LSQ++YIDK++ R+ M DSKKG+LP HGI LSK QCP+T E MG +PYASA+GS+
Sbjct: 1042 GLSQSTYIDKVLKRFNMHDSKKGFLPMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSI 1101
Query: 458 MYAMRCTRPDICYAVGIVSRFQSNPGIDHWVAVKNILKYLRRTRNYMLVYCGDK-LQLDG 282
MYAM CTRPD+ YA+ SR+QS+PG HW AVKNILKYLRRT++ LVY G++ L + G
Sbjct: 1102 MYAMLCTRPDVSYALSATSRYQSDPGEGHWTAVKNILKYLRRTKDMFLVYGGEEDLVVSG 1161
Query: 281 YTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWL 102
YTD+ FQ+DKDD RS SG VF L GGA+ W+S KQ + ADST EAEYIAA EA+KEAVW+
Sbjct: 1162 YTDASFQTDKDDYRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWI 1221
Query: 101 KSFLTDLEIVPNMDRPITLYCDNSGAVANSKEP 3
K F+++L ++ + P++LYCDNSGA+A +KEP
Sbjct: 1222 KKFVSELGVMTSTTGPMSLYCDNSGAIAQAKEP 1254
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 485 bits (1248), Expect = e-134
Identities = 236/393 (60%), Positives = 296/393 (75%), Gaps = 1/393 (0%)
Frame = -1
Query: 1178 LVAKGYSQEEGIDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIY 999
LVAKGY Q GIDY+ET+SPVAMLKSIRILL+ AA DYEIWQMDVKTAFLNG ++E +Y
Sbjct: 509 LVAKGYKQVHGIDYDETYSPVAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEEHVY 568
Query: 998 MQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKIN 819
M QPEGF +KVCKL RSIYGLKQASRSWNLRF+E IK + F ++ +EPCVYKK +
Sbjct: 569 MTQPEGFTVPEAARKVCKLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTS 628
Query: 818 NGKVTXXXXXXXXXXXIGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLL 639
V +GND+ +L VK WL + F MKD+GEA+YILGIRI RDR +++
Sbjct: 629 GSAVAFLVLYVDDILLLGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKII 688
Query: 638 ALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSL 459
LSQ +YIDK++ R+ M DSKKG++P HGI LSK QCP T E E M +IPYASA+GS+
Sbjct: 689 GLSQDTYIDKVLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSI 748
Query: 458 MYAMRCTRPDICYAVGIVSRFQSNPGIDHWVAVKNILKYLRRTRNYMLVYCG-DKLQLDG 282
MYAM TRPD+ A+ + SR+QS+PG HW+ V+NI KYLRRT++ LVY G ++L + G
Sbjct: 749 MYAMLYTRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEELVVSG 808
Query: 281 YTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWL 102
YTD+ FQ+DKDD RS SG F L GGA+ W+S KQ++ ADST EAEYIAA EA+KE VW+
Sbjct: 809 YTDASFQTDKDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWI 868
Query: 101 KSFLTDLEIVPNMDRPITLYCDNSGAVANSKEP 3
+ F+T+L +VP++ PI LYCDN+GA+A +KEP
Sbjct: 869 RKFITELGVVPSISGPIDLYCDNNGAIAQAKEP 901
>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
Length = 1303
Score = 480 bits (1235), Expect = e-133
Identities = 238/393 (60%), Positives = 295/393 (75%), Gaps = 1/393 (0%)
Frame = -1
Query: 1178 LVAKGYSQEEGIDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIY 999
LVAKG++Q G+DY+ETFSPVA +KSIRI+L+IAA DYEIWQMDVKTAFLNG + E +Y
Sbjct: 845 LVAKGFTQTPGVDYDETFSPVAKIKSIRIMLAIAAFHDYEIWQMDVKTAFLNGKLTEDVY 904
Query: 998 MQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKIN 819
M QPEGF KVCKL RSIYGLKQASRSWNL F E +K +GF +S DE CVY K +
Sbjct: 905 MNQPEGFVDAKYPNKVCKLERSIYGLKQASRSWNLCFHEKVKEFGFSRSEDESCVYVKAS 964
Query: 818 NGKVTXXXXXXXXXXXIGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLL 639
VT +GND+ L +VK WL F MKDLGEA+YILGIRI+RDRKKRL+
Sbjct: 965 GSIVTFLVLYVDDILLMGNDIPTLQDVKAWLGKCFAMKDLGEAAYILGIRILRDRKKRLI 1024
Query: 638 ALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSL 459
LSQ +Y++K++ R+ M++SKKG LP + LSK Q P T +E M R+PYASAVGS+
Sbjct: 1025 GLSQGTYLEKVLKRFSMENSKKGELPIQSNAKLSKTQSPSTDEEIAEMSRVPYASAVGSI 1084
Query: 458 MYAMRCTRPDICYAVGIVSRFQSNPGIDHWVAVKNILKYLRRTRNYMLVYCG-DKLQLDG 282
MYAM CTRPD+ +A+ +VSR+Q NPG HW+AVKNILKYLRRT+N +LV G D L+++G
Sbjct: 1085 MYAMTCTRPDVAFALSMVSRYQGNPGRAHWIAVKNILKYLRRTKNMVLVLGGSDTLRVEG 1144
Query: 281 YTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWL 102
YTD+ FQ+D+D RS SG VF L GGA+ W+S KQ + ADST E+EYIAA EASKEA WL
Sbjct: 1145 YTDASFQTDRDSGRSQSGWVFLLNGGAVTWKSSKQETVADSTCESEYIAASEASKEAAWL 1204
Query: 101 KSFLTDLEIVPNMDRPITLYCDNSGAVANSKEP 3
K+F+ DL +VP++ P+ L+CDN GAVA +KEP
Sbjct: 1205 KNFIGDLGVVPSIQEPLELFCDNEGAVALTKEP 1237
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 479 bits (1234), Expect = e-133
Identities = 238/393 (60%), Positives = 297/393 (75%), Gaps = 1/393 (0%)
Frame = -1
Query: 1178 LVAKGYSQEEGIDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIY 999
LVAKG+ Q +G+DY+ETFSPVAMLKSIRI+L+IAA DYEIWQMDVKTAFLNG +DE +Y
Sbjct: 811 LVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVY 870
Query: 998 MQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKIN 819
M QP+GF +K+CKL +SIY LKQASRSWN+RFDE +K+ GF ++ +EPCVYKKI+
Sbjct: 871 MTQPKGFVDPQSAKKICKLQKSIYRLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKIS 930
Query: 818 NGKVTXXXXXXXXXXXIGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLL 639
+ IGND+ +L VK L F MKDLGEA+YILGIRI RDR KRL+
Sbjct: 931 GSALVFLILYVDDILLIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLI 990
Query: 638 ALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSL 459
LSQ++YIDK++ R+ MQDSKKG+LP HGI L K QCP+T E M IPYASA+GS+
Sbjct: 991 GLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSI 1050
Query: 458 MYAMRCTRPDICYAVGIVSRFQSNPGIDHWVAVKNILKYLRRTRNYMLVY-CGDKLQLDG 282
MYAM CTR D+ YA+ SR+QS+ G HW+AVKNILKYLRRT++ LVY ++L ++G
Sbjct: 1051 MYAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEELVVNG 1110
Query: 281 YTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWL 102
YTD+ FQ+DKDD RS SG VF L GGA+ W+S KQ + ADST EAEYIAA EA+KEAVW+
Sbjct: 1111 YTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWI 1170
Query: 101 KSFLTDLEIVPNMDRPITLYCDNSGAVANSKEP 3
K F++ L ++ + P+ LYCDNSGA+A +KEP
Sbjct: 1171 KKFVSQLGVMTSASSPMDLYCDNSGAIAQAKEP 1203
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 479 bits (1234), Expect = e-133
Identities = 238/393 (60%), Positives = 297/393 (75%), Gaps = 1/393 (0%)
Frame = -1
Query: 1178 LVAKGYSQEEGIDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIY 999
LVAKG+ Q +G+DY+ETFSPVAMLKSIRI+L+IAA DYEIWQMDVKTAFLNG +DE +Y
Sbjct: 724 LVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVY 783
Query: 998 MQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKIN 819
M QP+GF +K+CKL +SIY LKQASRSWN+RFDE +K+ GF ++ +EPCVYKKI+
Sbjct: 784 MTQPKGFVDPQSAKKICKLQKSIYRLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKIS 843
Query: 818 NGKVTXXXXXXXXXXXIGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLL 639
+ IGND+ +L VK L F MKDLGEA+YILGIRI RDR KRL+
Sbjct: 844 GSALVFLILYVDDILLIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLI 903
Query: 638 ALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSL 459
LSQ++YIDK++ R+ MQDSKKG+LP HGI L K QCP+T E M IPYASA+GS+
Sbjct: 904 GLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSI 963
Query: 458 MYAMRCTRPDICYAVGIVSRFQSNPGIDHWVAVKNILKYLRRTRNYMLVY-CGDKLQLDG 282
MYAM CTR D+ YA+ SR+QS+ G HW+AVKNILKYLRRT++ LVY ++L ++G
Sbjct: 964 MYAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEELVVNG 1023
Query: 281 YTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWL 102
YTD+ FQ+DKDD RS SG VF L GGA+ W+S KQ + ADST EAEYIAA EA+KEAVW+
Sbjct: 1024 YTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWI 1083
Query: 101 KSFLTDLEIVPNMDRPITLYCDNSGAVANSKEP 3
K F++ L ++ + P+ LYCDNSGA+A +KEP
Sbjct: 1084 KKFVSQLGVMTSASSPMDLYCDNSGAIAQAKEP 1116
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 477 bits (1228), Expect = e-132
Identities = 232/393 (59%), Positives = 297/393 (75%), Gaps = 1/393 (0%)
Frame = -1
Query: 1178 LVAKGYSQEEGIDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIY 999
LVAKG+ Q +G+DY+ETFS VAMLKSIRI+L+IAA DYEIWQMDVKTAFLNG + E +Y
Sbjct: 858 LVAKGFRQVQGVDYDETFSLVAMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGKLSEDVY 917
Query: 998 MQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKIN 819
M QPEGF KVCKL +SIYGLKQASRSWN+RFDE IK +GF ++ +EPCVY K++
Sbjct: 918 MTQPEGFVDPNNASKVCKLQKSIYGLKQASRSWNIRFDEEIKRFGFVKNKEEPCVYMKVS 977
Query: 818 NGKVTXXXXXXXXXXXIGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLL 639
+ IGND+ +L VK L F MKDLGEA+YILGI+I RDR +RL+
Sbjct: 978 GSTLVILILYVDDILLIGNDIPMLESVKASLKNSFSMKDLGEAAYILGIKIYRDRSRRLI 1037
Query: 638 ALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSL 459
LSQ++YIDK+++R+ MQ++KKG+LP HGI SK Q P T E + M IPYASA+GS+
Sbjct: 1038 GLSQSTYIDKVLIRFNMQNTKKGFLPMSHGISPSKSQRPSTTDERDRMNGIPYASAIGSI 1097
Query: 458 MYAMRCTRPDICYAVGIVSRFQSNPGIDHWVAVKNILKYLRRTRNYMLVYCGD-KLQLDG 282
MYAM CTR D+ YA+ + SR+Q++PG HW AVKNILKYLRRT++ L+Y GD +L ++G
Sbjct: 1098 MYAMICTRQDVSYALSVTSRYQADPGECHWTAVKNILKYLRRTKDAFLIYGGDEELVVNG 1157
Query: 281 YTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWL 102
YTD+ FQ+DKDD RS SG VF L GGA+ W+S KQ + ADST +AEYIAA EA+KE VW+
Sbjct: 1158 YTDASFQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTKAEYIAASEAAKEGVWI 1217
Query: 101 KSFLTDLEIVPNMDRPITLYCDNSGAVANSKEP 3
++F+ +L +VP+ P+ LYCDN+GA+A +KEP
Sbjct: 1218 RNFIAELGVVPSASSPMDLYCDNNGAIAQAKEP 1250
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 466 bits (1199), Expect = e-129
Identities = 233/393 (59%), Positives = 289/393 (73%), Gaps = 1/393 (0%)
Frame = -1
Query: 1178 LVAKGYSQEEGIDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIY 999
LVAKG+ Q +G+DY+ETFSPVAMLK I I+L+IAA DYEIWQM VKTAFLNG +DE +Y
Sbjct: 733 LVAKGFRQIQGVDYDETFSPVAMLKFIWIVLAIAAYFDYEIWQMYVKTAFLNGNLDEDVY 792
Query: 998 MQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKIN 819
M QP+GF +K+CKL +SIYGLKQASRSWN+RFDE +K+ GF ++ +EPCVYKKI+
Sbjct: 793 MTQPKGFDDPQSAKKICKLHQSIYGLKQASRSWNIRFDEVVKALGFVRNEEEPCVYKKIS 852
Query: 818 NGKVTXXXXXXXXXXXIGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLL 639
+ IGND+ +L VK L F MKDLGEA+YILGIRI RDR KRL+
Sbjct: 853 GSALVFLILYVDDILLIGNDISMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLI 912
Query: 638 ALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSL 459
LSQ++YIDK++ R+ MQDSKKG+LP HGI L K QCP+T E M IPYASA+GS+
Sbjct: 913 GLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSI 972
Query: 458 MYAMRCTRPDICYAVGIVSRFQSNPGIDHWVAVKNILKYLRRTRNYMLVYCG-DKLQLDG 282
MYAM CTRPD+ YA+ SR+QS+PG HW+AVKNILKYLRRT++ L Y G ++L ++G
Sbjct: 973 MYAMLCTRPDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLAYGGQEELVVNG 1032
Query: 281 YTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWL 102
YTD+ FQ DKDD RS SG VF L GGA+ W+S KQ DST EAEYIAA EAVW+
Sbjct: 1033 YTDASFQIDKDDFRSQSGFVFCLNGGAVSWKSSKQDIVVDSTTEAEYIAA----SEAVWI 1088
Query: 101 KSFLTDLEIVPNMDRPITLYCDNSGAVANSKEP 3
K F++ L ++ + + LYCDNSGA+A +KEP
Sbjct: 1089 KKFVSQLGVMTSASSSMDLYCDNSGAIAQAKEP 1121
>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1050
Score = 449 bits (1154), Expect = e-123
Identities = 226/393 (57%), Positives = 284/393 (72%), Gaps = 1/393 (0%)
Frame = -1
Query: 1178 LVAKGYSQEEGIDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIY 999
LVAKG+ Q +G+DY+ETFS VAMLKSI+I+L+I A DYEIWQMDVKTAF+NG IDE +Y
Sbjct: 610 LVAKGFRQIQGVDYDETFSLVAMLKSIQIVLAITAYFDYEIWQMDVKTAFVNGNIDEDVY 669
Query: 998 MQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKIN 819
M Q +GF +K+CKL +SIYGLKQASRSWN+RFDE +K++ ++ +Y
Sbjct: 670 MTQLKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVVKAWALSKTKKSLVLY---- 725
Query: 818 NGKVTXXXXXXXXXXXIGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLL 639
IGND+ +L VK L F MKDLGEA+YILGIRI RDR KRL+
Sbjct: 726 ----------VDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLI 775
Query: 638 ALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSL 459
LSQ++YIDK++ R+ MQDSKKG+LP HGI L K QCP+T E M IPYASA+GS+
Sbjct: 776 GLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSI 835
Query: 458 MYAMRCTRPDICYAVGIVSRFQSNPGIDHWVAVKNILKYLRRTRNYMLVYCG-DKLQLDG 282
MYAM CT PD+ YA+ SR+QS+PG HW+AVKNILKYLRRT++ LVY G ++L + G
Sbjct: 836 MYAMLCTHPDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLVYGGQEELVVKG 895
Query: 281 YTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWL 102
YTD+ FQ+DKDD RS SG VF L GGA+ W+S KQ + DS EAEYIAA EA+KEAVW+
Sbjct: 896 YTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVVDSITEAEYIAASEAAKEAVWI 955
Query: 101 KSFLTDLEIVPNMDRPITLYCDNSGAVANSKEP 3
K F++ L ++ + P+ LYCDNSGA+A +KEP
Sbjct: 956 KKFVSQLGVMTSASSPMDLYCDNSGAIAQAKEP 988
>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 441 bits (1134), Expect = e-121
Identities = 214/362 (59%), Positives = 269/362 (74%), Gaps = 1/362 (0%)
Frame = -1
Query: 1085 SIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQKVCKLLRSIYGLKQASR 906
+IAA DYEIWQMDVKTAFLNG + E +YM QPEGF KVCKL +SIYGLKQASR
Sbjct: 473 AIAAYFDYEIWQMDVKTAFLNGNLHEDVYMTQPEGFVDPNNASKVCKLQKSIYGLKQASR 532
Query: 905 SWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXXXIGNDVEVLSEVKGWL 726
SWN+RFDE IK +GF ++ +EPCVY K++ + +GND+ +L VK L
Sbjct: 533 SWNIRFDEEIKRFGFIKNKEEPCVYMKVSGSTLVILILYVDDILLVGNDIPMLESVKSSL 592
Query: 725 ATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRYRMQDSKKGYLPTRHGI 546
F MKDLG+A+YILGIRI RDR KRL+ LSQ YIDK++ R+ MQ+SK+G+LP HGI
Sbjct: 593 RKSFSMKDLGDAAYILGIRIYRDRSKRLIGLSQEMYIDKVLNRFNMQNSKRGFLPMAHGI 652
Query: 545 VLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAVGIVSRFQSNPGIDHWV 366
LSK QCP T E + M IPYASA+GS+MYAM CTRPD+ YA+ + SR+Q++P HW
Sbjct: 653 NLSKNQCPTTTDERDKMSDIPYASAIGSIMYAMICTRPDVSYALSVTSRYQADPSEGHWT 712
Query: 365 AVKNILKYLRRTRNYMLVYCGD-KLQLDGYTDSDFQSDKDDRRSISGSVFTLCGGAIVWR 189
AVKNILKYLRRT++ LVY GD +L ++GYTD+ FQ+DKDD RS SG VF L GGA+ W+
Sbjct: 713 AVKNILKYLRRTKDVFLVYGGDEELVVNGYTDASFQTDKDDYRSQSGFVFILNGGAVSWK 772
Query: 188 SIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDRPITLYCDNSGAVANSK 9
S KQ + ADST EAEYIAA EA+KE VW+++F+T+L +VP+ P+ LYCDN+GA+A +K
Sbjct: 773 SSKQETVADSTTEAEYIAASEAAKEGVWIRNFITELGMVPSASSPMDLYCDNNGAIAQAK 832
Query: 8 EP 3
EP
Sbjct: 833 EP 834
>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 426 bits (1096), Expect = e-117
Identities = 213/358 (59%), Positives = 268/358 (74%), Gaps = 1/358 (0%)
Frame = -1
Query: 1178 LVAKGYSQEEGIDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIY 999
LVAKG+ Q +G+DY+ETF PVAMLKSIRI+L+IAA DYEIWQMDVKTAFLNG +DE +Y
Sbjct: 785 LVAKGFRQIQGVDYDETFLPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVY 844
Query: 998 MQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKIN 819
M QP+GF +K+CKL +SIYGLKQASRSWN+RFDE +K+ GF ++ + PCVYKKI+
Sbjct: 845 MTQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVVKALGFVKNEEVPCVYKKIS 904
Query: 818 NGKVTXXXXXXXXXXXIGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLL 639
+ IGND+ +L V L F MKDLGEA+YILGIRI RD KRL+
Sbjct: 905 GSALVFLILYVDDILLIGNDIPMLESVNISLKNSFSMKDLGEAAYILGIRIYRDGSKRLI 964
Query: 638 ALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSL 459
LS+++YIDK++ + MQDSKKG+LP HGI L+K QC +T E+ M IPYASA+GS+
Sbjct: 965 GLSESTYIDKVLKMFNMQDSKKGFLPMSHGINLNKNQCLQTTNEQNKMSVIPYASAIGSI 1024
Query: 458 MYAMRCTRPDICYAVGIVSRFQSNPGIDHWVAVKNILKYLRRTRNYMLVYCG-DKLQLDG 282
MYAM CTRPD+ Y + SR+QS+P HW+AVKNILKYLRRT++ LVY G ++L ++G
Sbjct: 1025 MYAMLCTRPDVSYVLSATSRYQSDPSESHWIAVKNILKYLRRTKDMFLVYGGQEELVVNG 1084
Query: 281 YTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAV 108
YTD+ FQ+DKDD RS SG VF L G A+ W+S KQ + A+ST EAEYIAA +A+KEAV
Sbjct: 1085 YTDASFQTDKDDFRSQSGFVFCLNGSAVSWKSSKQDTAANSTTEAEYIAASKAAKEAV 1142
>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 426 bits (1096), Expect = e-117
Identities = 213/358 (59%), Positives = 268/358 (74%), Gaps = 1/358 (0%)
Frame = -1
Query: 1178 LVAKGYSQEEGIDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIY 999
LVAKG+ Q +G+DY+ETF PVAMLKSIRI+L+IAA DYEIWQMDVKTAFLNG +DE +Y
Sbjct: 727 LVAKGFRQIQGVDYDETFLPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVY 786
Query: 998 MQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKIN 819
M QP+GF +K+CKL +SIYGLKQASRSWN+RFDE +K+ GF ++ + PCVYKKI+
Sbjct: 787 MTQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVVKALGFVKNEEVPCVYKKIS 846
Query: 818 NGKVTXXXXXXXXXXXIGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLL 639
+ IGND+ +L V L F MKDLGEA+YILGIRI RD KRL+
Sbjct: 847 GSALVFLILYVDDILLIGNDIPMLESVNISLKNSFSMKDLGEAAYILGIRIYRDGSKRLI 906
Query: 638 ALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSL 459
LS+++YIDK++ + MQDSKKG+LP HGI L+K QC +T E+ M IPYASA+GS+
Sbjct: 907 GLSESTYIDKVLKMFNMQDSKKGFLPMSHGINLNKNQCLQTTNEQNKMSVIPYASAIGSI 966
Query: 458 MYAMRCTRPDICYAVGIVSRFQSNPGIDHWVAVKNILKYLRRTRNYMLVYCG-DKLQLDG 282
MYAM CTRPD+ Y + SR+QS+P HW+AVKNILKYLRRT++ LVY G ++L ++G
Sbjct: 967 MYAMLCTRPDVSYVLSATSRYQSDPSESHWIAVKNILKYLRRTKDMFLVYGGQEELVVNG 1026
Query: 281 YTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAV 108
YTD+ FQ+DKDD RS SG VF L G A+ W+S KQ + A+ST EAEYIAA +A+KEAV
Sbjct: 1027 YTDASFQTDKDDFRSQSGFVFCLNGSAVSWKSSKQDTAANSTTEAEYIAASKAAKEAV 1084
>emb|CDF77009.1| hypothetical transposable element-related protein, partial [Boechera
divaricarpa]
Length = 1350
Score = 415 bits (1066), Expect = e-113
Identities = 204/392 (52%), Positives = 274/392 (69%), Gaps = 1/392 (0%)
Frame = -1
Query: 1178 LVAKGYSQEEGIDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIY 999
LVAKGY+Q+EGIDY+ETFSPV+ +S R ++++ A D E+ QMDVKTAFLNG IDE IY
Sbjct: 895 LVAKGYTQKEGIDYKETFSPVSSKESFRTIMALVAHYDLELHQMDVKTAFLNGDIDETIY 954
Query: 998 MQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKIN 819
M+QPE F + ++ VCKL +SIYGLKQASR W +F + I S+GF+ ++ E CVY+K +
Sbjct: 955 MEQPENFVSHDSKKMVCKLNKSIYGLKQASRQWYHKFHKVIISFGFEVNLVEDCVYQKFS 1014
Query: 818 NGKVTXXXXXXXXXXXIGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLL 639
K+ ND+ +L E+K +L F+MKDLGEAS++LGI+I+RDR + +L
Sbjct: 1015 GSKLIFLVLYVDDILLATNDINMLHEIKNFLKDNFEMKDLGEASFVLGIQIIRDRNQGIL 1074
Query: 638 ALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSL 459
LSQ +YIDK++ R+ M D K G P G QCPK E + M +IPYASAVGSL
Sbjct: 1075 RLSQKNYIDKVLKRFGMHDCKPGDTPVAKGDKFCLSQCPKENLEIQEMQKIPYASAVGSL 1134
Query: 458 MYAMRCTRPDICYAVGIVSRFQSNPGIDHWVAVKNILKYLRRTRNYMLVY-CGDKLQLDG 282
MYA CTRPDI Y VG++ R+ SNPG+DHW A K +++YL+RT++YML Y D L++ G
Sbjct: 1135 MYAQVCTRPDIAYIVGVLGRYLSNPGLDHWKAAKRVMRYLQRTKDYMLTYQRSDNLEIIG 1194
Query: 281 YTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWL 102
Y+DSDF +D R+S SG VF L GGAI WRS KQ+ A STM AE++A EAS + +WL
Sbjct: 1195 YSDSDFAGCQDSRKSTSGYVFLLAGGAISWRSAKQSLVASSTMAAEFVAVFEASNQGLWL 1254
Query: 101 KSFLTDLEIVPNMDRPITLYCDNSGAVANSKE 6
K+F+T L+I+ ++RP+ +YCDN AV S +
Sbjct: 1255 KNFVTRLQILEGIERPLKIYCDNKSAVLYSNK 1286
>emb|CAN67821.1| hypothetical protein VITISV_025855 [Vitis vinifera]
Length = 1356
Score = 414 bits (1064), Expect = e-113
Identities = 202/390 (51%), Positives = 271/390 (69%), Gaps = 1/390 (0%)
Frame = -1
Query: 1178 LVAKGYSQEEGIDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIY 999
LVAKG++Q+EGID++ETFSPV+ S RI++++ A D E+ QMDVKTAFLNG IDE IY
Sbjct: 898 LVAKGFTQKEGIDFKETFSPVSTKDSFRIIMALVAHYDLELHQMDVKTAFLNGDIDETIY 957
Query: 998 MQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKIN 819
M QPE F ++ + VCKL +SIYGLKQASR W +F + I SYGF+ ++ + CVY K +
Sbjct: 958 MVQPENFVSEDSKNMVCKLTKSIYGLKQASRQWYFKFHQIIVSYGFEANLMDECVYHKFS 1017
Query: 818 NGKVTXXXXXXXXXXXIGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLL 639
K ND+ +L + K +L+ F+MKDLG+AS++LGI+I RDR + +L
Sbjct: 1018 GSKYIFLVLYVDDILLATNDISILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGIL 1077
Query: 638 ALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSL 459
LSQ +YIDK++ RY MQ+SK G P G S QCPK E + M +IPYASAVGSL
Sbjct: 1078 GLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSLNQCPKNSLESQEMQKIPYASAVGSL 1137
Query: 458 MYAMRCTRPDICYAVGIVSRFQSNPGIDHWVAVKNILKYLRRTRNYMLVYCG-DKLQLDG 282
MYA CTRPDI Y VG++ R+ SNPG+DHW A K +++YL+RT+ YML Y D+L+L G
Sbjct: 1138 MYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKAAKRVMRYLQRTKEYMLTYRRLDQLELIG 1197
Query: 281 YTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWL 102
Y+DSDF +D RRS SG ++ L GGAI WRS KQT STMEAE++A EAS + +WL
Sbjct: 1198 YSDSDFAGCQDSRRSTSGYIYLLAGGAISWRSAKQTLVTSSTMEAEFVACYEASNQGIWL 1257
Query: 101 KSFLTDLEIVPNMDRPITLYCDNSGAVANS 12
++F+T L ++ ++RP+ ++CDN AV S
Sbjct: 1258 RNFVTGLRVLDGIERPLKIFCDNKSAVLYS 1287
>emb|CAN78154.1| hypothetical protein VITISV_032622 [Vitis vinifera]
Length = 1250
Score = 413 bits (1062), Expect = e-113
Identities = 202/390 (51%), Positives = 271/390 (69%), Gaps = 1/390 (0%)
Frame = -1
Query: 1178 LVAKGYSQEEGIDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIY 999
LVAKG++Q+EGID++ETFSPV+ S RI++++ A D E+ QMDVKTAFLNG IDE IY
Sbjct: 792 LVAKGFTQKEGIDFKETFSPVSTKDSFRIIMALVAHYDLELHQMDVKTAFLNGDIDETIY 851
Query: 998 MQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKIN 819
M QPE F ++ + VCKL +SIYGLKQASR W +F + I SYGF+ ++ + CVY K +
Sbjct: 852 MVQPENFVSEDSKNMVCKLTKSIYGLKQASRQWYFKFHQIIVSYGFEANLMDECVYHKFS 911
Query: 818 NGKVTXXXXXXXXXXXIGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLL 639
K ND+ +L + K +L+ F+MKDLG+AS++LGI+I RDR + +L
Sbjct: 912 GSKYIFLVLYVDDILLATNDIXILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGIL 971
Query: 638 ALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSL 459
LSQ +YIDK++ RY MQ+SK G P G S QCPK E + M +IPYASAVGSL
Sbjct: 972 GLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSLNQCPKNXLESQEMQKIPYASAVGSL 1031
Query: 458 MYAMRCTRPDICYAVGIVSRFQSNPGIDHWVAVKNILKYLRRTRNYMLVYCG-DKLQLDG 282
MYA CTRPDI Y VG++ R+ SNPG+DHW A K +++YL+RT+ YML Y D+L+L G
Sbjct: 1032 MYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLDQLELIG 1091
Query: 281 YTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWL 102
Y+DSDF +D RRS SG ++ L GGAI WRS KQT STMEAE++A EAS + +WL
Sbjct: 1092 YSDSDFAGCQDSRRSTSGYIYLLAGGAISWRSAKQTLVTSSTMEAEFVACYEASNQGIWL 1151
Query: 101 KSFLTDLEIVPNMDRPITLYCDNSGAVANS 12
++F+T L ++ ++RP+ ++CDN AV S
Sbjct: 1152 RNFVTGLRVLDGIERPLKIFCDNKSAVLYS 1181
>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
Length = 1321
Score = 408 bits (1049), Expect = e-111
Identities = 201/391 (51%), Positives = 271/391 (69%), Gaps = 1/391 (0%)
Frame = -1
Query: 1178 LVAKGYSQEEGIDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIY 999
LVAKG++Q+EGIDY+ETFSPV+ S+RI+L++ A D E+ QMDVKTAFLNG ++E +Y
Sbjct: 867 LVAKGFTQKEGIDYKETFSPVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGDLEEEVY 926
Query: 998 MQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKIN 819
M+QPEGF + E VCKL +SIYGLKQASR W L+F I S+GFD++ + C+Y K++
Sbjct: 927 MKQPEGFSSNSGEHLVCKLNKSIYGLKQASRQWYLKFHGIISSFGFDENPMDQCIYHKVS 986
Query: 818 NGKVTXXXXXXXXXXXIGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLL 639
K+ ND +L EVK +L+ F MKD+G+ASY++GI+I RDR + +L
Sbjct: 987 GSKICFLVLYVDDILLAANDRGLLHEVKQFLSKNFDMKDMGDASYVIGIKIHRDRSRGIL 1046
Query: 638 ALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSL 459
LSQ +YI+K++ R+RM+D P G + QCPK E E M IPYAS VGSL
Sbjct: 1047 GLSQETYINKILERFRMKDCSPSVAPIVKGDRFNLNQCPKNDFEREQMKNIPYASVVGSL 1106
Query: 458 MYAMRCTRPDICYAVGIVSRFQSNPGIDHWVAVKNILKYLRRTRNYMLVY-CGDKLQLDG 282
MYA CTRPDI +AVG++ R+QSNPGIDHW A K +L+YL+ T++YML+Y D L G
Sbjct: 1107 MYAQVCTRPDIAFAVGMLGRYQSNPGIDHWRAAKKVLRYLQGTKDYMLMYRQTDNLDAIG 1166
Query: 281 YTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWL 102
Y+DSDF D RRS SG +F + GGAI W S+KQ+ A STMEAE+++ EA+ VWL
Sbjct: 1167 YSDSDFAGCVDSRRSTSGYIFMMAGGAISWGSVKQSLAATSTMEAEFVSCFEATSHGVWL 1226
Query: 101 KSFLTDLEIVPNMDRPITLYCDNSGAVANSK 9
KSF++ L+I+ + RP+ ++CDNS AV +K
Sbjct: 1227 KSFISGLKIIDTISRPLRIFCDNSAAVFMAK 1257
>emb|CAN64073.1| hypothetical protein VITISV_038270 [Vitis vinifera]
Length = 1181
Score = 402 bits (1034), Expect = e-109
Identities = 199/391 (50%), Positives = 266/391 (68%), Gaps = 1/391 (0%)
Frame = -1
Query: 1178 LVAKGYSQEEGIDYEETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIY 999
LVAKG++Q+EGIDY+ETFSPV+ S RI++++ A D E+ QMDVKTAFLNG IDE IY
Sbjct: 723 LVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIY 782
Query: 998 MQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKIN 819
M QPE F +K +Q VC+L RSIYGLKQASR W +FD+ I S+GF ++ + C+Y K +
Sbjct: 783 MVQPENFESKDSKQLVCRLKRSIYGLKQASRQWYRKFDQVITSFGFKENTVDQCIYLKFS 842
Query: 818 NGKVTXXXXXXXXXXXIGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLL 639
K +DV +L E K +L+++F MKDLG AS++LGI+I RDR + +L
Sbjct: 843 GSKFIILVLYVDDILLASSDVGLLHETKRFLSSKFDMKDLGNASFVLGIQIHRDRSRGIL 902
Query: 638 ALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSL 459
LSQ +YIDK++ R+ M + G P G S QCPK E+++M R PYASAVGSL
Sbjct: 903 GLSQKAYIDKVLSRFGMSNCAPGDTPVAKGDKFSLHQCPKNELEKKDMERFPYASAVGSL 962
Query: 458 MYAMRCTRPDICYAVGIVSRFQSNPGIDHWVAVKNILKYLRRTRNYMLVY-CGDKLQLDG 282
MYA CTRPDI Y VG++ R+ SNPG+DHW K +++YL+RT++YML Y L++ G
Sbjct: 963 MYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTYRRSSHLEIVG 1022
Query: 281 YTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWL 102
Y+DSDF D RRS SG +F L GGA+ W+S+KQT A STMEAE+IA EAS +WL
Sbjct: 1023 YSDSDFAGCLDSRRSTSGYIFMLAGGAVSWKSVKQTLVASSTMEAEFIACYEASNHGIWL 1082
Query: 101 KSFLTDLEIVPNMDRPITLYCDNSGAVANSK 9
++F+T L IV +++P+ + CDN SK
Sbjct: 1083 RNFVTQLXIVDGIEKPLRINCDNKAXELYSK 1113