BLASTX nr result
ID: Mentha22_contig00051092
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00051092
(437 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s... 139 4e-31
ref|XP_006577683.1| PREDICTED: uncharacterized protein LOC102661... 106 4e-21
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 91 1e-16
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252... 83 5e-14
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera] 82 1e-13
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 82 1e-13
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 81 1e-13
ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854... 80 3e-13
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi] 79 9e-13
emb|CAN64075.1| hypothetical protein VITISV_017997 [Vitis vinifera] 76 6e-12
gb|AAU90333.1| Putative gag and pol polyprotein, identical [Sola... 75 1e-11
ref|XP_006367647.1| PREDICTED: uncharacterized protein LOC102590... 73 4e-11
gb|ABI34306.1| Polyprotein, putative [Solanum demissum] 73 4e-11
emb|CAN62301.1| hypothetical protein VITISV_034115 [Vitis vinifera] 72 6e-11
emb|CAE03764.2| OSJNBa0013K16.13 [Oryza sativa Japonica Group] 71 1e-10
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group] 70 2e-10
gb|ABA98555.1| retrotransposon protein, putative, Ty1-copia subc... 70 4e-10
gb|AAT38766.2| Polyprotein, putative [Solanum demissum] 70 4e-10
gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc... 69 5e-10
gb|ABF97537.1| retrotransposon protein, putative, Ty1-copia subc... 69 5e-10
>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
Length = 1038
Score = 139 bits (350), Expect = 4e-31
Identities = 70/134 (52%), Positives = 90/134 (67%), Gaps = 4/134 (2%)
Frame = +3
Query: 48 GKNPNYQADK----KIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAE 215
GKN + K +I K K+ CY C GHKSYQC+QR+ ++ KP QANLAE
Sbjct: 260 GKNSEKRQFKTTGGQIKKKKLVCYVCRKEGHKSYQCNQRKGRPSQ-----KPTPQANLAE 314
Query: 216 TDAKAEKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGECVY 395
D+ ++IAA+ EANL+ENK DW+LDTGASRHFC+NR L ++ED +GECV+
Sbjct: 315 QDS---------EIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTVDGECVF 365
Query: 396 MGNSSVAGVLGKGK 437
MGNS+ AGV+GKGK
Sbjct: 366 MGNSATAGVIGKGK 379
>ref|XP_006577683.1| PREDICTED: uncharacterized protein LOC102661346 [Glycine max]
Length = 362
Score = 106 bits (264), Expect = 4e-21
Identities = 56/107 (52%), Positives = 73/107 (68%), Gaps = 3/107 (2%)
Frame = +3
Query: 126 HKSYQCSQR--QQAGNKQPFRPKPPNQANLAETDAKAEKEGDGNDVIAAVT-EANLVENK 296
HK+Y+C R QQ+ N +P P P QA+LAE + +VIAAV EAN+V+NK
Sbjct: 191 HKAYECKLRKGQQSNNSKPAAPHAP-QAHLAENE----------EVIAAVVVEANMVDNK 239
Query: 297 NDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYMGNSSVAGVLGKGK 437
DW+LDTGAS+H C+N+ LF EDA +G+CV+MGNS+ VLGKGK
Sbjct: 240 VDWILDTGASKHLCANKELFHQIEDADDGKCVFMGNSATTRVLGKGK 286
>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 91.3 bits (225), Expect = 1e-16
Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 1/136 (0%)
Frame = +3
Query: 33 KQKFNGKNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLA 212
K+K N K K K C+ CG PGH + QC R K + PK ANLA
Sbjct: 249 KKKPNNKFSRPSGTNPTFKKKGNCFVCGKPGHHAPQCRHRA----KNDYPPK----ANLA 300
Query: 213 ETDAKAEKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEG-EC 389
E + + ++A V++ NLV N + WV+D+GA+RH C+NR++F ++ +G E
Sbjct: 301 EGE---------DTIVAVVSQVNLVTNVSKWVVDSGATRHICANRNVFTSYTSVGDGEEQ 351
Query: 390 VYMGNSSVAGVLGKGK 437
VY+G+S VLGKGK
Sbjct: 352 VYLGDSRTTPVLGKGK 367
>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
Length = 946
Score = 82.8 bits (203), Expect = 5e-14
Identities = 51/137 (37%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Frame = +3
Query: 30 KKQKFNGKNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANL 209
KK KF GK C+ CG GHKS C R NK P +AN+
Sbjct: 272 KKPKFQGK----------------CFNCGKQGHKSVDC--RLPKKNK-------PKEANV 306
Query: 210 AETDAKAEKEGDGNDVIAAVTEANLV-ENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGE 386
+ K D+ A V+E NLV N +W +DTGA+RH CS++ +F FE GE
Sbjct: 307 IDN---ITKNVSNIDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGE 363
Query: 387 CVYMGNSSVAGVLGKGK 437
V+MGNS+ + + G+GK
Sbjct: 364 KVFMGNSTTSEIKGQGK 380
>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
Length = 1096
Score = 81.6 bits (200), Expect = 1e-13
Identities = 51/137 (37%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Frame = +3
Query: 30 KKQKFNGKNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANL 209
KK KF GK C+ CG GHKS C R NK P +AN+
Sbjct: 193 KKPKFQGK----------------CFNCGKQGHKSVDC--RLPKKNK-------PKEANV 227
Query: 210 AETDAKAEKEGDGNDVIAAVTEANLV-ENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGE 386
+ K + D+ A V+E NLV N +W +DTGA+RH CS++ +F FE GE
Sbjct: 228 IDDITKNVYD---IDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGE 284
Query: 387 CVYMGNSSVAGVLGKGK 437
V+MGNS+ + + G+GK
Sbjct: 285 KVFMGNSATSEIKGQGK 301
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 81.6 bits (200), Expect = 1e-13
Identities = 51/137 (37%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Frame = +3
Query: 30 KKQKFNGKNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANL 209
KK KF GK C+ CG GHKS C R NK P +AN+
Sbjct: 272 KKPKFQGK----------------CFNCGKQGHKSVDC--RLPKKNK-------PKEANV 306
Query: 210 AETDAKAEKEGDGNDVIAAVTEANLV-ENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGE 386
+ K + D+ A V+E NLV N +W +DTGA+RH CS++ +F FE GE
Sbjct: 307 IDDITKNVYD---IDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGE 363
Query: 387 CVYMGNSSVAGVLGKGK 437
V+MGNS+ + + G+GK
Sbjct: 364 KVFMGNSATSEIKGQGK 380
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 81.3 bits (199), Expect = 1e-13
Identities = 50/137 (36%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Frame = +3
Query: 30 KKQKFNGKNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANL 209
KK KF GK C+ CG GHKS C R NK P +AN+
Sbjct: 272 KKPKFQGK----------------CFNCGKQGHKSVDC--RLPKKNK-------PKEANV 306
Query: 210 AETDAKAEKEGDGNDVIAAVTEANLV-ENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGE 386
+ K + D+ V+E NLV N +W +DTGA+RH CS++ +F FE GE
Sbjct: 307 IDNITKNVSD---IDLTTVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGE 363
Query: 387 CVYMGNSSVAGVLGKGK 437
V+MGNS+ + + G+GK
Sbjct: 364 KVFMGNSTTSEIKGQGK 380
>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
vinifera]
Length = 478
Score = 80.1 bits (196), Expect = 3e-13
Identities = 50/137 (36%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Frame = +3
Query: 30 KKQKFNGKNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANL 209
KK KF GK C+ CG GHKS C R NK P +AN+
Sbjct: 272 KKPKFQGK----------------CFNCGKQGHKSVDC--RLPKKNK-------PKEANV 306
Query: 210 AETDAKAEKEGDGNDVIAAVTEANLV-ENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGE 386
+ K + D+ V+E NLV N +W +DTGA+RH CS++ +F FE GE
Sbjct: 307 IDDITKNVYD---IDLTTVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGE 363
Query: 387 CVYMGNSSVAGVLGKGK 437
V+MGNS+ + + G+GK
Sbjct: 364 KVFMGNSATSEIKGQGK 380
>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
Length = 701
Score = 78.6 bits (192), Expect = 9e-13
Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Frame = +3
Query: 21 HGFKKQKFNGKNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQ 200
HG KK+K P KK K + CY C GHK+ C PK +
Sbjct: 245 HGPKKKK-KKLGPKGGISKKQTKFQGKCYNCDKMGHKASDCRL-----------PKKKRE 292
Query: 201 ANLAETDAKAEKEGDGNDVIAAVTEANLV-ENKNDWVLDTGASRHFCSNRSLFQNFEDAA 377
AN+ E + + ++ A V E N+V N +W +DTGA+RH CS++ LF +FE A+
Sbjct: 293 ANVVENITQHVSD---INLSAVVLEVNMVGSNPREWWIDTGATRHVCSDKGLFTSFEAAS 349
Query: 378 EGECVYMGNSSVAGVLGKGK 437
E ++MGNS+ + + G+GK
Sbjct: 350 NREKLFMGNSATSEIEGQGK 369
>emb|CAN64075.1| hypothetical protein VITISV_017997 [Vitis vinifera]
Length = 635
Score = 75.9 bits (185), Expect = 6e-12
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Frame = +3
Query: 15 KPHGFKKQKFNGK---NPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRP 185
KP + +K N + N + + +K C+ CG GH + QC R++
Sbjct: 40 KPKNNRSRKQNSRTKPNASNKVQNSTIKKXGNCFVCGKSGHHAAQCRHRKRT-------K 92
Query: 186 KPPNQANLAETDAKAEKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNF 365
K ++ANLAET + +E ++V N DWV+D+ A+RH C NRS F ++
Sbjct: 93 KSNSKANLAETKVIT---------VVISSEVSMVTNMKDWVVDSRATRHICGNRSAFTSY 143
Query: 366 EDAAEG-ECVYMGNSSVAGVLGK 431
EG E V+MG+S V+GK
Sbjct: 144 TTVKEGEEQVFMGDSRSTLVIGK 166
>gb|AAU90333.1| Putative gag and pol polyprotein, identical [Solanum demissum]
Length = 853
Score = 74.7 bits (182), Expect = 1e-11
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Frame = +3
Query: 15 KPHGFKKQKFNGKNP------NYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQP 176
KP K +K NG+ P N QA + V+ K C+ CG GH + C
Sbjct: 75 KPKKKKFKKNNGRPPKKNNGENNQAQNQQVQDKGPCFVCGKSGHIARFCR---------- 124
Query: 177 FRPKPPN-QANLAETDAKAEKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSL 353
FR + PN QAN+ E +A +T+ N+VEN + W +D+GA+RH C ++
Sbjct: 125 FRKRGPNPQANVTE-----------EPFVAVITDINMVENVDGWWVDSGANRHVCYDKDW 173
Query: 354 FQNFEDAAEGECVYMGNSSVAGVLGKG 434
F+ + E + + +G++ VLGKG
Sbjct: 174 FKKYTHFEEPKTIMLGDAHTTQVLGKG 200
>ref|XP_006367647.1| PREDICTED: uncharacterized protein LOC102590769, partial [Solanum
tuberosum]
Length = 566
Score = 73.2 bits (178), Expect = 4e-11
Identities = 46/132 (34%), Positives = 67/132 (50%)
Frame = +3
Query: 30 KKQKFNGKNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANL 209
KK+K + + + QA KK K CY CG HKS C ++ +K K +QA++
Sbjct: 117 KKRKKSNRQKSEQAKKKF---KGNCYNCGKADHKSSDCLSPRKDKDKD----KDKSQASI 169
Query: 210 AETDAKAEKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGEC 389
E E E D D+ A ++E NLV N +W LD+G++RH CS + F + A E
Sbjct: 170 LE-----EME-DAYDLYAMISECNLVGNPKEWFLDSGSTRHICSVKKAFATYTPAEFDED 223
Query: 390 VYMGNSSVAGVL 425
+Y+ NS L
Sbjct: 224 IYVVNSKACRFL 235
>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
Length = 1691
Score = 73.2 bits (178), Expect = 4e-11
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Frame = +3
Query: 15 KPHGFKKQKFNGKNP------NYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQP 176
KP K +K NG+ P N QA + V+ K C+ CG GH + C
Sbjct: 228 KPKKKKFKKNNGRPPKKNNGENIQAQNQQVQDKGPCFVCGKSGHIARFCR---------- 277
Query: 177 FRPKPPN-QANLAETDAKAEKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSL 353
FR + PN QAN+ E +A +T+ N+VEN + W D+GA+RH C ++
Sbjct: 278 FRKRGPNPQANVTE-----------EPFVAVITDINMVENVDGWWADSGANRHVCYDKDW 326
Query: 354 FQNFEDAAEGECVYMGNSSVAGVLGKG 434
F+ + E + + +G+S VLG G
Sbjct: 327 FKKYTHFEEPKTIMLGDSHTTQVLGTG 353
>emb|CAN62301.1| hypothetical protein VITISV_034115 [Vitis vinifera]
Length = 588
Score = 72.4 bits (176), Expect = 6e-11
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 4/145 (2%)
Frame = +3
Query: 15 KPHGFKKQKFNGK---NPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRP 185
KP + +K N + N + + +K C+ CG GH + QC R++
Sbjct: 98 KPKNNRSRKQNSQTKPNASNKVHNSTIKKWGNCFVCGKSGHHAPQCRHRKRI-------E 150
Query: 186 KPPNQANLAETDAKAEKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNF 365
K ++ANLAE + I E ++V N DWV+D+ A+RH C +S F ++
Sbjct: 151 KSNSKANLAEAEVIT---------IVISFEVSMVTNMKDWVVDSRATRHICGKKSAFTSY 201
Query: 366 EDAAEG-ECVYMGNSSVAGVLGKGK 437
EG E V+MG+S V+GKGK
Sbjct: 202 TTLKEGEEQVFMGDSRSTLVIGKGK 226
>emb|CAE03764.2| OSJNBa0013K16.13 [Oryza sativa Japonica Group]
Length = 1264
Score = 71.2 bits (173), Expect = 1e-10
Identities = 48/136 (35%), Positives = 66/136 (48%)
Frame = +3
Query: 27 FKKQKFNGKNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQAN 206
FKKQK N NPN + + TC+ CG GH + +C QR+ K P
Sbjct: 225 FKKQKKNNNNPN--------QDERTCFVCGQVGHLARKCPQRKGM--------KAPAGQT 268
Query: 207 LAETDAKAEKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGE 386
+ GDG+ T ++ ++ N WV DTGA+ HFC++ SLF +++ A G
Sbjct: 269 SKSANVTIGNTGDGSGYGNLPTVFSVNQSTNWWV-DTGANVHFCADISLFSSYQ-VARGS 326
Query: 387 CVYMGNSSVAGVLGKG 434
V MGN S A V G G
Sbjct: 327 TVLMGNGSHASVHGVG 342
>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 70.5 bits (171), Expect = 2e-10
Identities = 48/136 (35%), Positives = 66/136 (48%)
Frame = +3
Query: 27 FKKQKFNGKNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQAN 206
FKKQK N NPN + + TC+ CG GH + +CSQR+ K P
Sbjct: 225 FKKQKKNNNNPN--------QDERTCFVCGQVGHLARKCSQRKGM--------KAPAGQT 268
Query: 207 LAETDAKAEKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGE 386
+ GDG+ T ++ ++ N WV DTGA+ H C++ SLF +++ A G
Sbjct: 269 SKSANVTIGNTGDGSGYGNLPTVFSVNQSTNWWV-DTGANVHVCADISLFSSYQ-VARGS 326
Query: 387 CVYMGNSSVAGVLGKG 434
V MGN S A V G G
Sbjct: 327 TVLMGNGSHASVHGVG 342
>gb|ABA98555.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1361
Score = 69.7 bits (169), Expect = 4e-10
Identities = 48/136 (35%), Positives = 65/136 (47%)
Frame = +3
Query: 27 FKKQKFNGKNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQAN 206
FKKQK N NPN + + TC+ CG GH + +C QR+ K P
Sbjct: 310 FKKQKKNNNNPN--------QDERTCFVCGQVGHLARKCPQRKGM--------KAPAGQT 353
Query: 207 LAETDAKAEKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGE 386
D GDG+ T ++ ++ N WV DTGA+ H C++ SLF +++ A G
Sbjct: 354 SKSADVTIGNIGDGSGYGNLPTVFSVNQSTNWWV-DTGANVHVCADISLFSSYQ-VARGS 411
Query: 387 CVYMGNSSVAGVLGKG 434
V MGN S A V G G
Sbjct: 412 TVLMGNGSHASVHGVG 427
>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
Length = 1355
Score = 69.7 bits (169), Expect = 4e-10
Identities = 44/126 (34%), Positives = 64/126 (50%)
Frame = +3
Query: 60 NYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQANLAETDAKAEKE 239
N A+KK K T GHKS C R +K + K +QAN+ E E E
Sbjct: 300 NKTAEKKSRKSS----TIIGAGHKSSDC--RAPRKDKDKDKGKGKSQANIVE-----EME 348
Query: 240 GDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGECVYMGNSSVAG 419
D +D+ ++E NLV N +W LD+GA+RH CS + +F + E ++MGN++
Sbjct: 349 -DADDLCGMISECNLVGNPKEWFLDSGATRHICSAKEVFATYTHVEVDEDLFMGNTTTTR 407
Query: 420 VLGKGK 437
+ G GK
Sbjct: 408 IAGTGK 413
>gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1287
Score = 69.3 bits (168), Expect = 5e-10
Identities = 49/136 (36%), Positives = 65/136 (47%)
Frame = +3
Query: 27 FKKQKFNGKNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQAN 206
FKKQK N NPN + + TC+ CG GH + +C QR+ G K P +
Sbjct: 186 FKKQKKNNNNPN--------QDERTCFVCGQVGHLARKCPQRK--GMKAP----AGQTSK 231
Query: 207 LAETDAKAEKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGE 386
A +G G + AV N N W +DTGA+ H C++ SLF +++ A G
Sbjct: 232 SANVTIGNTGDGSGYGNLPAVFSVNQSTN---WWVDTGANVHVCADISLFSSYQ-VARGS 287
Query: 387 CVYMGNSSVAGVLGKG 434
V MGN S A V G G
Sbjct: 288 TVLMGNGSHASVHGVG 303
>gb|ABF97537.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1397
Score = 69.3 bits (168), Expect = 5e-10
Identities = 47/136 (34%), Positives = 65/136 (47%)
Frame = +3
Query: 27 FKKQKFNGKNPNYQADKKIVKPKVTCYTCGAPGHKSYQCSQRQQAGNKQPFRPKPPNQAN 206
FKKQK N NPN + + TC+ CG GH + +C QR+ K P
Sbjct: 302 FKKQKKNNNNPN--------QDERTCFVCGQVGHLARKCPQRKGM--------KAPAGQT 345
Query: 207 LAETDAKAEKEGDGNDVIAAVTEANLVENKNDWVLDTGASRHFCSNRSLFQNFEDAAEGE 386
+ GDG+ T ++ ++ N WV DTGA+ H C++ SLF +++ A G
Sbjct: 346 FKSANVTIGNTGDGSGYGNLPTVFSVNQSTNWWV-DTGANVHVCADISLFSSYQ-VARGS 403
Query: 387 CVYMGNSSVAGVLGKG 434
V MGN S A V G G
Sbjct: 404 TVLMGNGSHASVHGVG 419