BLASTX nr result

ID: Mentha22_contig00050222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00050222
         (549 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY99341.1| unknown [Silene latifolia]                              56   5e-06

>gb|AAY99341.1| unknown [Silene latifolia]
          Length = 555

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
 Frame = -2

Query: 377 GYTFNVPREKERPLIPRPRGKNFWVAQLEVGLRFPILPFFVKLSKLYEIPLNQLSPTSFR 198
           GY   +P+E +    P       ++  LE GLRFP+  + V + K   + + QL P + R
Sbjct: 118 GYKIVIPKEGQAVCCPPKGCIGVYIRHLEYGLRFPLNAYVVAIIKAMNVAVAQLHPLAIR 177

Query: 197 KAIFFHMILTLEGIKDTASLFFKCHYVRPRGYHLHFSPTSWFS-------KFYGKYSSLD 39
             I F  +   +G   T +LF + H++RP         T W+S           K SS  
Sbjct: 178 TIIGFVWLCLFKGEAPTVNLFRRLHHLRPS----TLGGTGWYSVQTEPGYVTVSKISSC- 232

Query: 38  KAWHRRYVVV 9
           K W RR+V V
Sbjct: 233 KDWKRRWVYV 242


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