BLASTX nr result

ID: Mentha22_contig00050069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00050069
         (810 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU44006.1| hypothetical protein MIMGU_mgv1a002242mg [Mimulus...   323   4e-86
gb|EPS67787.1| hypothetical protein M569_06986, partial [Genlise...   264   3e-68
ref|XP_002519191.1| pentatricopeptide repeat-containing protein,...   257   4e-66
ref|XP_006355396.1| PREDICTED: putative pentatricopeptide repeat...   256   5e-66
ref|XP_007156389.1| hypothetical protein PHAVU_003G282300g [Phas...   251   3e-64
ref|XP_007035741.1| Pentatricopeptide (PPR) domain protein 40, p...   248   1e-63
ref|XP_006488870.1| PREDICTED: putative pentatricopeptide repeat...   242   1e-61
ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat...   242   1e-61
ref|XP_004509597.1| PREDICTED: putative pentatricopeptide repeat...   242   1e-61
ref|XP_006419430.1| hypothetical protein CICLE_v10006939mg [Citr...   241   3e-61
ref|XP_007224454.1| hypothetical protein PRUPE_ppa022157mg [Prun...   236   7e-60
ref|XP_004299932.1| PREDICTED: putative pentatricopeptide repeat...   224   3e-56
ref|XP_006858848.1| hypothetical protein AMTR_s00066p00184190 [A...   217   5e-54
ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat...   212   1e-52
gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sat...   209   7e-52
gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indi...   209   7e-52
ref|NP_001067007.1| Os12g0557800 [Oryza sativa Japonica Group] g...   209   7e-52
ref|XP_006406795.1| hypothetical protein EUTSA_v10022362mg [Eutr...   204   2e-50
ref|NP_188314.1| pentatricopeptide repeat-containing protein [Ar...   204   4e-50
ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat...   203   7e-50

>gb|EYU44006.1| hypothetical protein MIMGU_mgv1a002242mg [Mimulus guttatus]
          Length = 696

 Score =  323 bits (829), Expect = 4e-86
 Identities = 151/229 (65%), Positives = 191/229 (83%)
 Frame = +1

Query: 4    MTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQ 183
            M+++GF PN+VTFNTLI+GY K +DV KARE++LML +HG +PD+FTFS+IID LC  N+
Sbjct: 467  MSKRGFCPNLVTFNTLISGYCKGRDVNKARELLLMLFNHGFRPDVFTFSSIIDVLCQLNR 526

Query: 184  TVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNA 363
              +AF+CF EMVEW ITPNA++YN+LIRSLCI G+ SKAMKLLRKM++D +QPD+YTFNA
Sbjct: 527  ISEAFDCFLEMVEWEITPNAITYNTLIRSLCICGDISKAMKLLRKMKVDRIQPDVYTFNA 586

Query: 364  LIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNG 543
            LIK YC+ +KID+AQRLL SML L LRPDNFTY AF++A CE GR  EAK L  SME NG
Sbjct: 587  LIKNYCKANKIDEAQRLLMSMLNLNLRPDNFTYTAFVSALCESGRFTEAKDLFASMEANG 646

Query: 544  CRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVPSRSDASV 690
            C+PDAY+CNSFI+ALVK+G+ +EA D+WLKYK+KG+ L+ +P +  A V
Sbjct: 647  CKPDAYSCNSFIDALVKTGRFEEAQDLWLKYKEKGMDLRTIPVKYSALV 695



 Score = 90.5 bits (223), Expect = 7e-16
 Identities = 54/188 (28%), Positives = 91/188 (48%)
 Frame = +1

Query: 76  DVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYN 255
           D+ +  ++    I++G+K DL T  T ++ L  + +          ++  G+  +  SYN
Sbjct: 386 DLEETCQVFESFIENGVKVDLSTCLTFVEALYKSKKEEKGNKYLYWIIHEGLLTDVFSYN 445

Query: 256 SLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTL 435
            +I   C +    +A+++L  M   G  P++ TFN LI  YC+   ++KA+ LL  +   
Sbjct: 446 MVIDCFCKAKMMERALEILGMMSKRGFCPNLVTFNTLISGYCKGRDVNKARELLLMLFNH 505

Query: 436 GLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEA 615
           G RPD FT+ + I+  C+  RI EA      M      P+A T N+ I +L   G   +A
Sbjct: 506 GFRPDVFTFSSIIDVLCQLNRISEAFDCFLEMVEWEITPNAITYNTLIRSLCICGDISKA 565

Query: 616 TDVWLKYK 639
             +  K K
Sbjct: 566 MKLLRKMK 573



 Score = 80.1 bits (196), Expect = 9e-13
 Identities = 39/138 (28%), Positives = 74/138 (53%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           +M +    PN +T+NTLI       D+ KA +++  +    ++PD++TF+ +I   C AN
Sbjct: 536 EMVEWEITPNAITYNTLIRSLCICGDISKAMKLLRKMKVDRIQPDVYTFNALIKNYCKAN 595

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
           +  +A      M+   + P+  +Y + + +LC SG  ++A  L   M+ +G +PD Y+ N
Sbjct: 596 KIDEAQRLLMSMLNLNLRPDNFTYTAFVSALCESGRFTEAKDLFASMEANGCKPDAYSCN 655

Query: 361 ALIKKYCRDHKIDKAQRL 414
           + I    +  + ++AQ L
Sbjct: 656 SFIDALVKTGRFEEAQDL 673



 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 58/270 (21%), Positives = 118/270 (43%), Gaps = 52/270 (19%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGL---- 168
            QM   G+ PNV T+  LI GY+  K + +  +++  +    +KP+  T+ ++++G+    
Sbjct: 274  QMEGLGYSPNVFTYTILIDGYFNGKIIDEPFKLLDRMKAKNVKPNDATYRSLVNGVFRSV 333

Query: 169  -----------------------------CLANQTV-------------------DAFNC 204
                                         CL N ++                   +    
Sbjct: 334  SPCEAFDLLFKWVDKEQNLPKVVYDSIVYCLCNNSLPEQTSAFFRIADKKGVDLEETCQV 393

Query: 205  FEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCR 384
            FE  +E G+  +  +  + + +L  S    K  K L  +  +G+  D++++N +I  +C+
Sbjct: 394  FESFIENGVKVDLSTCLTFVEALYKSKKEEKGNKYLYWIIHEGLLTDVFSYNMVIDCFCK 453

Query: 385  DHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYT 564
               +++A  +L  M   G  P+  T+   I+ +C+   + +A+ LL  + N+G RPD +T
Sbjct: 454  AKMMERALEILGMMSKRGFCPNLVTFNTLISGYCKGRDVNKARELLLMLFNHGFRPDVFT 513

Query: 565  CNSFIEALVKSGKSQEATDVWLKYKQKGLT 654
             +S I+ L +  +  EA D +L+  +  +T
Sbjct: 514  FSSIIDVLCQLNRISEAFDCFLEMVEWEIT 543



 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 52/166 (31%), Positives = 80/166 (48%)
 Frame = +1

Query: 205 FEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCR 384
           FE++   GI P+   YN++I  L  S +   A    ++M++D    D +T+N LI   C+
Sbjct: 202 FEQVSYLGIFPSTRLYNAVIDGLVKSNSLDLAYLKFQQMEVDNCVRDRFTYNILINGVCK 261

Query: 385 DHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYT 564
              +D+A RL+K M  LG  P+ FTY   I+ +     I E   LL  M+    +P+  T
Sbjct: 262 AGVVDEALRLVKQMEGLGYSPNVFTYTILIDGYFNGKIIDEPFKLLDRMKAKNVKPNDAT 321

Query: 565 CNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVPSRSDASVVDCL 702
             S +  + +S    EA D+  K+  K   L   P     S+V CL
Sbjct: 322 YRSLVNGVFRSVSPCEAFDLLFKWVDKEQNL---PKVVYDSIVYCL 364



 Score = 73.6 bits (179), Expect = 8e-11
 Identities = 62/248 (25%), Positives = 105/248 (42%), Gaps = 52/248 (20%)
 Frame = +1

Query: 121 GLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKA 300
           G+ P    ++ +IDGL  +N    A+  F++M       +  +YN LI  +C +G   +A
Sbjct: 209 GIFPSTRLYNAVIDGLVKSNSLDLAYLKFQQMEVDNCVRDRFTYNILINGVCKAGVVDEA 268

Query: 301 MKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFIN- 477
           ++L+++M+  G  P+++T+  LI  Y     ID+  +LL  M    ++P++ TY + +N 
Sbjct: 269 LRLVKQMEGLGYSPNVFTYTILIDGYFNGKIIDEPFKLLDRMKAKNVKPNDATYRSLVNG 328

Query: 478 --------------------------------AFCECG-----------RILEAKG---- 516
                                            +C C            RI + KG    
Sbjct: 329 VFRSVSPCEAFDLLFKWVDKEQNLPKVVYDSIVYCLCNNSLPEQTSAFFRIADKKGVDLE 388

Query: 517 ----LLKSMENNGCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVPSRSDA 684
               + +S   NG + D  TC +F+EAL KS K ++          +GL L  V S +  
Sbjct: 389 ETCQVFESFIENGVKVDLSTCLTFVEALYKSKKEEKGNKYLYWIIHEGL-LTDVFSYN-- 445

Query: 685 SVVDCLSK 708
            V+DC  K
Sbjct: 446 MVIDCFCK 453



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 61/287 (21%), Positives = 105/287 (36%), Gaps = 52/287 (18%)
 Frame = +1

Query: 37   TFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTVDAFNCFEEM 216
            T+N LI G  K   V +A  +V  +   G  P++FT++ +IDG        + F   + M
Sbjct: 251  TYNILINGVCKAGVVDEALRLVKQMEGLGYSPNVFTYTILIDGYFNGKIIDEPFKLLDRM 310

Query: 217  VEWGITPNAVSYNSLIRSL---------------------------------CISGNA-- 291
                + PN  +Y SL+  +                                 C+  N+  
Sbjct: 311  KAKNVKPNDATYRSLVNGVFRSVSPCEAFDLLFKWVDKEQNLPKVVYDSIVYCLCNNSLP 370

Query: 292  ---SKAMKLLRKMQID--------------GVQPDIYTFNALIKKYCRDHKIDKAQRLLK 420
               S   ++  K  +D              GV+ D+ T    ++   +  K +K  + L 
Sbjct: 371  EQTSAFFRIADKKGVDLEETCQVFESFIENGVKVDLSTCLTFVEALYKSKKEEKGNKYLY 430

Query: 421  SMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSG 600
             ++  GL  D F+Y   I+ FC+   +  A  +L  M   G  P+  T N+ I    K  
Sbjct: 431  WIIHEGLLTDVFSYNMVIDCFCKAKMMERALEILGMMSKRGFCPNLVTFNTLISGYCKGR 490

Query: 601  KSQEATDVWLKYKQKGLTLKPVPSRSDASVVDCLSKR*TNFRCFVNL 741
               +A ++ L     G         S   V+  L++    F CF+ +
Sbjct: 491  DVNKARELLLMLFNHGFRPDVFTFSSIIDVLCQLNRISEAFDCFLEM 537


>gb|EPS67787.1| hypothetical protein M569_06986, partial [Genlisea aurea]
          Length = 617

 Score =  264 bits (674), Expect = 3e-68
 Identities = 124/200 (62%), Positives = 159/200 (79%)
 Frame = +1

Query: 25   PNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTVDAFNC 204
            PN+VTFNT++ G+ K +D  KARE +LML+ HG KPD+FTFS+IID LC   +  DAF+C
Sbjct: 418  PNLVTFNTVLFGFCKCRDETKARETLLMLLKHGFKPDVFTFSSIIDLLCRIPRMDDAFSC 477

Query: 205  FEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCR 384
            F EM EW + PNAV YN+LIR+LC SG  ++A+KL RKM+ DG+ PD+YTFNALI++YC+
Sbjct: 478  FVEMAEWEVPPNAVVYNTLIRALCTSGTVARAVKLFRKMKDDGIPPDVYTFNALIQRYCK 537

Query: 385  DHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYT 564
             ++I +AQRLL SMLT+G+ PDNFTYIAFIN+FCE GR+ EAK LL SME NGCRPD  T
Sbjct: 538  ANRIKEAQRLLSSMLTMGVSPDNFTYIAFINSFCESGRLAEAKELLFSMELNGCRPDLLT 597

Query: 565  CNSFIEALVKSGKSQEATDV 624
            C+S ++A VK+G  QEA D+
Sbjct: 598  CHSVVDAFVKAGGIQEAQDI 617



 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 44/137 (32%), Positives = 73/137 (53%)
 Frame = +1

Query: 205 FEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCR 384
           F+++   GI P    YN+LI +L  S +   A    ++M++D    D +T+N LI   C+
Sbjct: 127 FDQLAYLGILPTTRLYNALINALVKSDSLDLAYLKFQQMEVDNCARDRFTYNILIHGVCK 186

Query: 385 DHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYT 564
            + +D+A RL+K M   G  P+ FTY   I+ +C   R+  A  LL++M+    RP+  T
Sbjct: 187 ANVLDEALRLVKQMEGSGYSPNVFTYTILIDGYCSSKRVDGAFVLLETMKKRNIRPNDAT 246

Query: 565 CNSFIEALVKSGKSQEA 615
             S I  + +S   ++A
Sbjct: 247 YRSLINGVFRSLPPEKA 263



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 1/213 (0%)
 Frame = +1

Query: 16  GFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTVDA 195
           G++P+       +    K  D+ +   M   L +HG K DL T   +I+ L  +      
Sbjct: 309 GYVPDSSVSTMALTCLLKGLDLEETCWMFECLTNHGAKVDLSTCLALIEALYRSRYEKKG 368

Query: 196 FNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQ-PDIYTFNALIK 372
                 +++ G+  +  SYN L    C +   S+A+KLL  M       P++ TFN ++ 
Sbjct: 369 DLYLSWVLKDGLISSVFSYNMLADCFCKAKMMSRALKLLEVMCRSRASFPNLVTFNTVLF 428

Query: 373 KYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRP 552
            +C+     KA+  L  +L  G +PD FT+ + I+  C   R+ +A      M      P
Sbjct: 429 GFCKCRDETKARETLLMLLKHGFKPDVFTFSSIIDLLCRIPRMDDAFSCFVEMAEWEVPP 488

Query: 553 DAYTCNSFIEALVKSGKSQEATDVWLKYKQKGL 651
           +A   N+ I AL  SG    A  ++ K K  G+
Sbjct: 489 NAVVYNTLIRALCTSGTVARAVKLFRKMKDDGI 521



 Score = 74.3 bits (181), Expect = 5e-11
 Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 6/230 (2%)
 Frame = +1

Query: 37  TFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTVDAFNCFEEM 216
           T+N LI G  K   + +A  +V  +   G  P++FT++ +IDG C + +   AF   E M
Sbjct: 176 TYNILIHGVCKANVLDEALRLVKQMEGSGYSPNVFTYTILIDGYCSSKRVDGAFVLLETM 235

Query: 217 VEWGITPNAVSYNSLIRSLCISGNASKAMKLL-----RKMQIDGVQPDIYTFNALIKKYC 381
            +  I PN  +Y SLI  +  S    KA + L     R+  +  V  D   +N       
Sbjct: 236 KKRNIRPNDATYRSLINGVFRSLPPEKAFESLFSWISREKDLPRVVHDSIIYNLC----- 290

Query: 382 RDHKIDK-AQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDA 558
            DH + K    +L++ L  G  PD+      +    +   + E   + + + N+G + D 
Sbjct: 291 -DHSLPKHVITVLRAALRAGYVPDSSVSTMALTCLLKGLDLEETCWMFECLTNHGAKVDL 349

Query: 559 YTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVPSRSDASVVDCLSK 708
            TC + IEAL +S + ++  D++L +  K   +  V S +   + DC  K
Sbjct: 350 STCLALIEALYRS-RYEKKGDLYLSWVLKDGLISSVFSYN--MLADCFCK 396



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 33/119 (27%), Positives = 66/119 (55%)
 Frame = +1

Query: 121 GLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKA 300
           G+ P    ++ +I+ L  ++    A+  F++M       +  +YN LI  +C +    +A
Sbjct: 134 GILPTTRLYNALINALVKSDSLDLAYLKFQQMEVDNCARDRFTYNILIHGVCKANVLDEA 193

Query: 301 MKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFIN 477
           ++L+++M+  G  P+++T+  LI  YC   ++D A  LL++M    +RP++ TY + IN
Sbjct: 194 LRLVKQMEGSGYSPNVFTYTILIDGYCSSKRVDGAFVLLETMKKRNIRPNDATYRSLIN 252


>ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223541506|gb|EEF43055.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 719

 Score =  257 bits (656), Expect = 4e-66
 Identities = 120/231 (51%), Positives = 167/231 (72%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
            +M  KG  PN+VTFNTLI GY K  ++ K+R++++ML++HG KPD+FTFS+IIDGLC A 
Sbjct: 487  EMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAK 546

Query: 181  QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
            Q  DA  CF EMV WG++PNAV+YN LI SLCI G+  ++MKLLRKMQ DG+ PD+++FN
Sbjct: 547  QIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFN 606

Query: 361  ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
            ALI+ +CR  K++ A++L  SML+LGL PDN+TY+AFI  FC+ GR  EAK L  SME N
Sbjct: 607  ALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEAN 666

Query: 541  GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVPSRSDASVV 693
            GC PD++TCN  ++ALVK  + + A  +     + G+ +       D++++
Sbjct: 667  GCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGILVNFAAISEDSALL 717



 Score =  111 bits (278), Expect = 3e-22
 Identities = 70/251 (27%), Positives = 117/251 (46%), Gaps = 35/251 (13%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
            +  ++G      T+  LI   Y    V +       ++  GL  ++ +++ +ID  C  +
Sbjct: 417  RFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTS 476

Query: 181  QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
                A N F+EM   GI PN V++N+LI   C  G   K+  LL  +   G +PDI+TF+
Sbjct: 477  MMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFS 536

Query: 361  ALIKKYCRDHKID-----------------------------------KAQRLLKSMLTL 435
            ++I   CR  +I+                                   ++ +LL+ M T 
Sbjct: 537  SIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTD 596

Query: 436  GLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEA 615
            G+ PD F++ A I +FC  G++ +AK L  SM + G  PD YT  +FI+   +SG+  EA
Sbjct: 597  GINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEA 656

Query: 616  TDVWLKYKQKG 648
             +++L  +  G
Sbjct: 657  KELFLSMEANG 667



 Score =  105 bits (261), Expect = 3e-20
 Identities = 62/212 (29%), Positives = 104/212 (49%)
 Frame = +1

Query: 16   GFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTVDA 195
            G  P+  TFN  +    K  D+ +   ++   ++ G+K    T+  +I  L +A +  + 
Sbjct: 387  GHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEG 446

Query: 196  FNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKK 375
             + F +MV+ G+  N  SYN +I   C +    KA    ++MQ  G+ P++ TFN LI  
Sbjct: 447  NHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDG 506

Query: 376  YCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPD 555
            YC+  +I K++ LL  +L  G +PD FT+ + I+  C   +I +A G    M   G  P+
Sbjct: 507  YCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPN 566

Query: 556  AYTCNSFIEALVKSGKSQEATDVWLKYKQKGL 651
            A T N  I +L   G    +  +  K +  G+
Sbjct: 567  AVTYNILIHSLCIIGDVPRSMKLLRKMQTDGI 598



 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 46/178 (25%), Positives = 93/178 (52%)
 Frame = +1

Query: 121 GLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKA 300
           G KPD  TF+  ++ L       +  N  +  VE G+     +Y +LI++L ++G  ++ 
Sbjct: 387 GHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEG 446

Query: 301 MKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINA 480
                +M  DG+  ++ ++N +I  +C+   +DKA    K M   G+ P+  T+   I+ 
Sbjct: 447 NHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDG 506

Query: 481 FCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLT 654
           +C+ G I +++ LL  +  +G +PD +T +S I+ L ++ + ++A   + +    GL+
Sbjct: 507 YCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLS 564



 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 49/163 (30%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
 Frame = +1

Query: 226 GITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKA 405
           GI+P+   YN++I +L  S +   A    ++M  D  +PD +T+N LI   CR   +D+A
Sbjct: 212 GISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEA 271

Query: 406 QRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEA 585
            RL+K M  LG  P+ FTY   I+ F    ++ EA  +L++M+     P   T  SFI  
Sbjct: 272 LRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHG 331

Query: 586 LVKSGKSQEATDVWLKYKQKGLTLKPVPSR-SDASVVDCLSKR 711
           + +     +A ++ +++ ++    +PV  R +  +++ CLS +
Sbjct: 332 VFRCVAPNKAFELAIEFIER----EPVLQRLACDTLLCCLSSK 370



 Score = 73.9 bits (180), Expect = 6e-11
 Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 35/212 (16%)
 Frame = +1

Query: 121 GLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKA 300
           G+ P    ++ +ID L  +N    A+  F++M      P+  +YN LI  +C SG   +A
Sbjct: 212 GISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEA 271

Query: 301 MKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINA 480
           ++L+++M+  G  P+++T+  LI  +    K+D+A R+L++M    + P   T  +FI+ 
Sbjct: 272 LRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHG 331

Query: 481 FCEC-----------------------------------GRILEAKGLLKSMENNGCRPD 555
              C                                       EA  LLK     G +PD
Sbjct: 332 VFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPD 391

Query: 556 AYTCNSFIEALVKSGKSQEATDVWLKYKQKGL 651
           + T N  +  L+K     E  ++  ++ ++G+
Sbjct: 392 SATFNIAMNCLIKGFDLNEVCNILDRFVEQGM 423



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 52/217 (23%), Positives = 95/217 (43%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           QM   G+ PNV T+  LI G++  K V +A  ++  +    + P   T  + I G+    
Sbjct: 277 QMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCV 336

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
               AF    E +E       ++ ++L+  L     A +A  LL+K    G +PD  TFN
Sbjct: 337 APNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFN 396

Query: 361 ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
             +    +   +++   +L   +  G++    TY+A I A    G++ E       M  +
Sbjct: 397 IAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKD 456

Query: 541 GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGL 651
           G   +  + N  I+   K+    +AT+ + + + KG+
Sbjct: 457 GLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGI 493



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 45/167 (26%), Positives = 70/167 (41%), Gaps = 1/167 (0%)
 Frame = +1

Query: 283 GNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTY 462
           G A    ++  ++   G+ P    +NA+I    + + +D A    + M     +PD FTY
Sbjct: 196 GLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTY 255

Query: 463 IAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQ 642
              I+  C  G + EA  L+K ME  G  P+ +T    I+    + K  EA  V    K 
Sbjct: 256 NILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKA 315

Query: 643 KGLTLKPVPSRSDASVVDCLSKR*TNFRCFV-NLRFELYM*FVLGQP 780
           + ++      RS    V         FRC   N  FEL + F+  +P
Sbjct: 316 RKVSPSEATIRSFIHGV---------FRCVAPNKAFELAIEFIEREP 353


>ref|XP_006355396.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like isoform X1 [Solanum
            tuberosum] gi|565377884|ref|XP_006355397.1| PREDICTED:
            putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like isoform X2 [Solanum
            tuberosum]
          Length = 709

 Score =  256 bits (655), Expect = 5e-66
 Identities = 119/221 (53%), Positives = 167/221 (75%)
 Frame = +1

Query: 4    MTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQ 183
            M Q+G  PN+VTFNTLI+GY K+ +V K  E++++L++HG +PD+FTFS++ID LC  N+
Sbjct: 486  MLQRGVTPNIVTFNTLISGYSKVGEVNKVHELLVILLEHGFRPDIFTFSSMIDSLCRVNR 545

Query: 184  TVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNA 363
              DA +C  EMVEWG+ PNAV YN LIR+LC+ G+  +++KLLRKMQ DG++ D+++FNA
Sbjct: 546  IDDALDCLTEMVEWGVAPNAVPYNILIRALCVLGDVGRSLKLLRKMQGDGIKADVFSFNA 605

Query: 364  LIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNG 543
            LI+ +C+ +KID+AQRLL SMLTL L PDN TY AFI A C  GR  EAK L  SME NG
Sbjct: 606  LIQSFCKMNKIDEAQRLLISMLTLDLIPDNHTYGAFIRALCNLGRFDEAKNLFFSMEANG 665

Query: 544  CRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPV 666
            C PD  TC  ++++L++SG ++EA DV  +  ++G+ L+P+
Sbjct: 666  CVPDDLTCKLYLDSLIQSGHTKEAQDVLKECGKRGMLLEPI 706



 Score =  106 bits (264), Expect = 1e-20
 Identities = 64/222 (28%), Positives = 112/222 (50%)
 Frame = +1

Query: 4    MTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQ 183
            +T +G   +V  +  L    YK   V +  + +  +   GL  + F ++ +ID  C    
Sbjct: 416  ITVRGVKVSVDIYLALADALYKGGRVEQGNKYMDQVFKDGLVSNTFFYNRVIDCFCKIKM 475

Query: 184  TVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNA 363
               A + F++M++ G+TPN V++N+LI      G  +K  +LL  +   G +PDI+TF++
Sbjct: 476  MDKASDAFKDMLQRGVTPNIVTFNTLISGYSKVGEVNKVHELLVILLEHGFRPDIFTFSS 535

Query: 364  LIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNG 543
            +I   CR ++ID A   L  M+  G+ P+   Y   I A C  G +  +  LL+ M+ +G
Sbjct: 536  MIDSLCRVNRIDDALDCLTEMVEWGVAPNAVPYNILIRALCVLGDVGRSLKLLRKMQGDG 595

Query: 544  CRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVP 669
             + D ++ N+ I++  K  K  EA  + +      LTL  +P
Sbjct: 596  IKADVFSFNALIQSFCKMNKIDEAQRLLISM----LTLDLIP 633



 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 3/175 (1%)
 Frame = +1

Query: 208 EEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRD 387
           E++   G+ PN   YN++I +L    +   A    ++MQ+D  +PD +T+N LI   C+ 
Sbjct: 204 EQVSYLGLAPNTRLYNAVIDALIKCNSLDLAYLKFQQMQVDNCKPDKFTYNILIHGVCKA 263

Query: 388 HKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTC 567
             +++A RL+K M  +G  P+ FTY   +  FC   R+ EA  L   M++ G  P+  T 
Sbjct: 264 GVVEEALRLVKQMEGVGYSPNVFTYTILVEGFCNAKRVDEAFELFGVMKSRGIVPNEATV 323

Query: 568 NSFIEAL---VKSGKSQEATDVWLKYKQKGLTLKPVPSRSDASVVDCLSKR*TNF 723
            S +  +   V   K  E    WL+ +        +P+ + +S++ CLS   TNF
Sbjct: 324 RSLVNGVFHCVAPDKGFELLSRWLEKEH------VLPNVACSSMLHCLS---TNF 369



 Score = 80.1 bits (196), Expect = 9e-13
 Identities = 55/213 (25%), Positives = 93/213 (43%)
 Frame = +1

Query: 13   KGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTVD 192
            +G+L +  T N  +    K  ++    +++  +   G+K  +  +  + D L    +   
Sbjct: 384  RGYLLDNSTLNIALTCLIKGLELDDTCQILDFITVRGVKVSVDIYLALADALYKGGRVEQ 443

Query: 193  AFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIK 372
                 +++ + G+  N   YN +I   C      KA    + M   GV P+I TFN LI 
Sbjct: 444  GNKYMDQVFKDGLVSNTFFYNRVIDCFCKIKMMDKASDAFKDMLQRGVTPNIVTFNTLIS 503

Query: 373  KYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRP 552
             Y +  +++K   LL  +L  G RPD FT+ + I++ C   RI +A   L  M   G  P
Sbjct: 504  GYSKVGEVNKVHELLVILLEHGFRPDIFTFSSMIDSLCRVNRIDDALDCLTEMVEWGVAP 563

Query: 553  DAYTCNSFIEALVKSGKSQEATDVWLKYKQKGL 651
            +A   N  I AL   G    +  +  K +  G+
Sbjct: 564  NAVPYNILIRALCVLGDVGRSLKLLRKMQGDGI 596



 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 44/171 (25%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
 Frame = +1

Query: 121 GLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKA 300
           GL P+   ++ +ID L   N    A+  F++M      P+  +YN LI  +C +G   +A
Sbjct: 210 GLAPNTRLYNAVIDALIKCNSLDLAYLKFQQMQVDNCKPDKFTYNILIHGVCKAGVVEEA 269

Query: 301 MKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINA 480
           ++L+++M+  G  P+++T+  L++ +C   ++D+A  L   M + G+ P+  T  + +N 
Sbjct: 270 LRLVKQMEGVGYSPNVFTYTILVEGFCNAKRVDEAFELFGVMKSRGIVPNEATVRSLVNG 329

Query: 481 FCECGRILEAKG---LLKSMENNGCRPDAYTCNSFIEALVKSGKSQEATDV 624
              C  +   KG   L + +E     P+   C+S +  L  +   +EA  +
Sbjct: 330 VFHC--VAPDKGFELLSRWLEKEHVLPNV-ACSSMLHCLSTNFLPREAAQL 377



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 45/195 (23%), Positives = 91/195 (46%)
 Frame = +1

Query: 85  KAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYNSLI 264
           +A +++ + ID G   D  T +  +  L    +  D     + +   G+  +   Y +L 
Sbjct: 373 EAAQLLRISIDRGYLLDNSTLNIALTCLIKGLELDDTCQILDFITVRGVKVSVDIYLALA 432

Query: 265 RSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLGLR 444
            +L   G   +  K + ++  DG+  + + +N +I  +C+   +DKA    K ML  G+ 
Sbjct: 433 DALYKGGRVEQGNKYMDQVFKDGLVSNTFFYNRVIDCFCKIKMMDKASDAFKDMLQRGVT 492

Query: 445 PDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEATDV 624
           P+  T+   I+ + + G + +   LL  +  +G RPD +T +S I++L +  +  +A D 
Sbjct: 493 PNIVTFNTLISGYSKVGEVNKVHELLVILLEHGFRPDIFTFSSMIDSLCRVNRIDDALDC 552

Query: 625 WLKYKQKGLTLKPVP 669
             +  + G+    VP
Sbjct: 553 LTEMVEWGVAPNAVP 567



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 39/140 (27%), Positives = 68/140 (48%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           +M + G  PN V +N LI     L DV ++ +++  +   G+K D+F+F+ +I   C  N
Sbjct: 555 EMVEWGVAPNAVPYNILIRALCVLGDVGRSLKLLRKMQGDGIKADVFSFNALIQSFCKMN 614

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
           +  +A      M+   + P+  +Y + IR+LC  G   +A  L   M+ +G  PD  T  
Sbjct: 615 KIDEAQRLLISMLTLDLIPDNHTYGAFIRALCNLGRFDEAKNLFFSMEANGCVPDDLTCK 674

Query: 361 ALIKKYCRDHKIDKAQRLLK 420
             +    +     +AQ +LK
Sbjct: 675 LYLDSLIQSGHTKEAQDVLK 694



 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 57/253 (22%), Positives = 102/253 (40%), Gaps = 35/253 (13%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           QM      P+  T+N LI G  K   V +A  +V  +   G  P++FT++ +++G C A 
Sbjct: 240 QMQVDNCKPDKFTYNILIHGVCKAGVVEEALRLVKQMEGVGYSPNVFTYTILVEGFCNAK 299

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSL----------------------------- 273
           +  +AF  F  M   GI PN  +  SL+  +                             
Sbjct: 300 RVDEAFELFGVMKSRGIVPNEATVRSLVNGVFHCVAPDKGFELLSRWLEKEHVLPNVACS 359

Query: 274 ----CISGN--ASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTL 435
               C+S N    +A +LLR     G   D  T N  +    +  ++D   ++L  +   
Sbjct: 360 SMLHCLSTNFLPREAAQLLRISIDRGYLLDNSTLNIALTCLIKGLELDDTCQILDFITVR 419

Query: 436 GLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEA 615
           G++     Y+A  +A  + GR+ +    +  +  +G   + +  N  I+   K     +A
Sbjct: 420 GVKVSVDIYLALADALYKGGRVEQGNKYMDQVFKDGLVSNTFFYNRVIDCFCKIKMMDKA 479

Query: 616 TDVWLKYKQKGLT 654
           +D +    Q+G+T
Sbjct: 480 SDAFKDMLQRGVT 492



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 48/198 (24%), Positives = 79/198 (39%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           Q++  G  PN   +N +I    K   +  A      +     KPD FT++ +I G+C A 
Sbjct: 205 QVSYLGLAPNTRLYNAVIDALIKCNSLDLAYLKFQQMQVDNCKPDKFTYNILIHGVCKAG 264

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
              +A    ++M   G +PN  +Y  L+   C +    +A +L   M+  G+ P+  T  
Sbjct: 265 VVEEALRLVKQMEGVGYSPNVFTYTILVEGFCNAKRVDEAFELFGVMKSRGIVPNEATVR 324

Query: 361 ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
           +L+         DK   LL   L       N    + ++         EA  LL+   + 
Sbjct: 325 SLVNGVFHCVAPDKGFELLSRWLEKEHVLPNVACSSMLHCLSTNFLPREAAQLLRISIDR 384

Query: 541 GCRPDAYTCNSFIEALVK 594
           G   D  T N  +  L+K
Sbjct: 385 GYLLDNSTLNIALTCLIK 402



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 33/124 (26%), Positives = 59/124 (47%)
 Frame = +1

Query: 307 LLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFC 486
           +L ++   G+ P+   +NA+I    + + +D A    + M     +PD FTY   I+  C
Sbjct: 202 ILEQVSYLGLAPNTRLYNAVIDALIKCNSLDLAYLKFQQMQVDNCKPDKFTYNILIHGVC 261

Query: 487 ECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPV 666
           + G + EA  L+K ME  G  P+ +T    +E    + +  EA +++   K +G+     
Sbjct: 262 KAGVVEEALRLVKQMEGVGYSPNVFTYTILVEGFCNAKRVDEAFELFGVMKSRGIVPNEA 321

Query: 667 PSRS 678
             RS
Sbjct: 322 TVRS 325


>ref|XP_007156389.1| hypothetical protein PHAVU_003G282300g [Phaseolus vulgaris]
            gi|561029743|gb|ESW28383.1| hypothetical protein
            PHAVU_003G282300g [Phaseolus vulgaris]
          Length = 661

 Score =  251 bits (640), Expect = 3e-64
 Identities = 119/223 (53%), Positives = 162/223 (72%)
 Frame = +1

Query: 4    MTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQ 183
            M  +GF+PN+VTFNTLI GY K   + KARE++ ML++ GLKPD+FTF +IIDGLC   +
Sbjct: 439  MQLRGFVPNLVTFNTLINGYCKEGAIVKARELLEMLLETGLKPDIFTFGSIIDGLCRIKK 498

Query: 184  TVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNA 363
              +AF CF EM+EWGITPNAV YN LIRSLC  G+ ++++KLLR+MQ +GV PD Y++NA
Sbjct: 499  IEEAFECFTEMIEWGITPNAVIYNILIRSLCAIGDVARSVKLLRRMQKEGVNPDTYSYNA 558

Query: 364  LIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNG 543
            LI+ +CR +K+DKA+ +  SM   GL PDN+TY AFI A  E GR+ +AK +  SME NG
Sbjct: 559  LIQIFCRTNKVDKAKNIFDSMSKSGLNPDNYTYGAFIEALYESGRLEDAKKIFYSMEANG 618

Query: 544  CRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVPS 672
            C PD Y CN  I+ LV+    +EA ++  +Y+ KG++L  +P+
Sbjct: 619  CSPDLYICNLIIKILVQQNCMEEARNIMERYRVKGISLNSIPN 661



 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 62/248 (25%), Positives = 112/248 (45%), Gaps = 35/248 (14%)
 Frame = +1

Query: 13   KGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTVD 192
            +G+ P+   FN +IA   K  ++ ++ ++  +L   G+K  + T+  +++         D
Sbjct: 337  RGYAPDSSVFNVIIACLVKGAELRESCDIFEILRKQGVKASIGTYLVLVEASYKRGWRED 396

Query: 193  AFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIK 372
                  +M+  G+  N  +YN +I   C +     A +  R MQ+ G  P++ TFN LI 
Sbjct: 397  GDRVSGQMISDGLICNVFTYNMIINCFCRAKLMDNASEAFRDMQLRGFVPNLVTFNTLIN 456

Query: 373  KYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFC---------EC----------- 492
             YC++  I KA+ LL+ +L  GL+PD FT+ + I+  C         EC           
Sbjct: 457  GYCKEGAIVKARELLEMLLETGLKPDIFTFGSIIDGLCRIKKIEEAFECFTEMIEWGITP 516

Query: 493  ---------------GRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEATDVW 627
                           G +  +  LL+ M+  G  PD Y+ N+ I+   ++ K  +A +++
Sbjct: 517  NAVIYNILIRSLCAIGDVARSVKLLRRMQKEGVNPDTYSYNALIQIFCRTNKVDKAKNIF 576

Query: 628  LKYKQKGL 651
                + GL
Sbjct: 577  DSMSKSGL 584



 Score = 87.4 bits (215), Expect = 6e-15
 Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 3/200 (1%)
 Frame = +1

Query: 64  YKLKDVPKAREMVLML---IDHGLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGIT 234
           Y L +   A+EMVL L   +  G  PD   F+ II  L    +  ++ + FE + + G+ 
Sbjct: 316 YCLANSSMAKEMVLFLREVLGRGYAPDSSVFNVIIACLVKGAELRESCDIFEILRKQGVK 375

Query: 235 PNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRL 414
            +  +Y  L+ +    G      ++  +M  DG+  +++T+N +I  +CR   +D A   
Sbjct: 376 ASIGTYLVLVEASYKRGWREDGDRVSGQMISDGLICNVFTYNMIINCFCRAKLMDNASEA 435

Query: 415 LKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVK 594
            + M   G  P+  T+   IN +C+ G I++A+ LL+ +   G +PD +T  S I+ L +
Sbjct: 436 FRDMQLRGFVPNLVTFNTLINGYCKEGAIVKARELLEMLLETGLKPDIFTFGSIIDGLCR 495

Query: 595 SGKSQEATDVWLKYKQKGLT 654
             K +EA + + +  + G+T
Sbjct: 496 IKKIEEAFECFTEMIEWGIT 515



 Score = 80.9 bits (198), Expect = 5e-13
 Identities = 39/147 (26%), Positives = 78/147 (53%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           +M + G  PN V +N LI     + DV ++ +++  +   G+ PD ++++ +I   C  N
Sbjct: 508 EMIEWGITPNAVIYNILIRSLCAIGDVARSVKLLRRMQKEGVNPDTYSYNALIQIFCRTN 567

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
           +   A N F+ M + G+ P+  +Y + I +L  SG    A K+   M+ +G  PD+Y  N
Sbjct: 568 KVDKAKNIFDSMSKSGLNPDNYTYGAFIEALYESGRLEDAKKIFYSMEANGCSPDLYICN 627

Query: 361 ALIKKYCRDHKIDKAQRLLKSMLTLGL 441
            +IK   + + +++A+ +++     G+
Sbjct: 628 LIIKILVQQNCMEEARNIMERYRVKGI 654



 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 3/131 (2%)
 Frame = +1

Query: 229 ITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQ 408
           +TP+   YN+LI +L  S +   A    ++M  D  +PD  T+N L+   C+   +D+A 
Sbjct: 159 LTPSTRLYNALIDALVKSNSIDLAYLKFQQMPADNCRPDRITYNTLVHGVCKIGVVDEAL 218

Query: 409 RLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEAL 588
           RL++ M   G  P+ FTY   ++ FC   R+ EA G+ ++M+ +G  P+  T  + +  +
Sbjct: 219 RLIRQMNEKGHLPNVFTYTMLVDGFCNANRVGEAFGVFETMKRSGVGPNEATVRALVHGV 278

Query: 589 ---VKSGKSQE 612
              V  GK+ E
Sbjct: 279 FRCVDPGKALE 289



 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 5/213 (2%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           QM      P+ +T+NTL+ G  K+  V +A  ++  + + G  P++FT++ ++DG C AN
Sbjct: 188 QMPADNCRPDRITYNTLVHGVCKIGVVDEALRLIRQMNEKGHLPNVFTYTMLVDGFCNAN 247

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMK-LLRKMQIDGVQPDIYTF 357
           +  +AF  FE M   G+ PN  +  +L+  +    +  KA++ LL K     V+ +   F
Sbjct: 248 RVGEAFGVFETMKRSGVGPNEATVRALVHGVFRCVDPGKALEMLLSKFLYREVEQECVHF 307

Query: 358 NALIKK--YC--RDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLK 525
                   YC        +    L+ +L  G  PD+  +   I    +   + E+  + +
Sbjct: 308 KLACDTVLYCLANSSMAKEMVLFLREVLGRGYAPDSSVFNVIIACLVKGAELRESCDIFE 367

Query: 526 SMENNGCRPDAYTCNSFIEALVKSGKSQEATDV 624
            +   G +    T    +EA  K G  ++   V
Sbjct: 368 ILRKQGVKASIGTYLVLVEASYKRGWREDGDRV 400



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 42/169 (24%), Positives = 86/169 (50%), Gaps = 6/169 (3%)
 Frame = +1

Query: 124 LKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAM 303
           L P    ++ +ID L  +N    A+  F++M      P+ ++YN+L+  +C  G   +A+
Sbjct: 159 LTPSTRLYNALIDALVKSNSIDLAYLKFQQMPADNCRPDRITYNTLVHGVCKIGVVDEAL 218

Query: 304 KLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAF 483
           +L+R+M   G  P+++T+  L+  +C  +++ +A  + ++M   G+ P+  T  A ++  
Sbjct: 219 RLIRQMNEKGHLPNVFTYTMLVDGFCNANRVGEAFGVFETMKRSGVGPNEATVRALVHGV 278

Query: 484 CEC---GRILE---AKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQE 612
             C   G+ LE   +K L + +E   C      C++ +  L  S  ++E
Sbjct: 279 FRCVDPGKALEMLLSKFLYREVEQE-CVHFKLACDTVLYCLANSSMAKE 326



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 51/222 (22%), Positives = 91/222 (40%), Gaps = 5/222 (2%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           Q++     P+   +N LI    K   +  A      +     +PD  T++T++ G+C   
Sbjct: 153 QISFLSLTPSTRLYNALIDALVKSNSIDLAYLKFQQMPADNCRPDRITYNTLVHGVCKIG 212

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
              +A     +M E G  PN  +Y  L+   C +    +A  +   M+  GV P+  T  
Sbjct: 213 VVDEALRLIRQMNEKGHLPNVFTYTMLVDGFCNANRVGEAFGVFETMKRSGVGPNEATVR 272

Query: 361 ALIKKYCRDHKIDKA-QRLLKSMLTLGLRPD--NFTYIAFINAFCECGRIL--EAKGLLK 525
           AL+    R     KA + LL   L   +  +  +F        +C     +  E    L+
Sbjct: 273 ALVHGVFRCVDPGKALEMLLSKFLYREVEQECVHFKLACDTVLYCLANSSMAKEMVLFLR 332

Query: 526 SMENNGCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGL 651
            +   G  PD+   N  I  LVK  + +E+ D++   +++G+
Sbjct: 333 EVLGRGYAPDSSVFNVIIACLVKGAELRESCDIFEILRKQGV 374


>ref|XP_007035741.1| Pentatricopeptide (PPR) domain protein 40, putative [Theobroma cacao]
            gi|508714770|gb|EOY06667.1| Pentatricopeptide (PPR)
            domain protein 40, putative [Theobroma cacao]
          Length = 679

 Score =  248 bits (634), Expect = 1e-63
 Identities = 118/223 (52%), Positives = 162/223 (72%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
            +M  +G  P +VTFNT+I+G+ K+ +V KA+E ++ML++ G  PD+FTFS++IDGLC A+
Sbjct: 455  EMYLRGIAPTLVTFNTIISGHCKIGEVHKAKEFLVMLLESGFDPDIFTFSSLIDGLCRAH 514

Query: 181  QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
               DAF+CF EM +W +TPN V+YN LIRSLC  G+ ++AMKLLRKMQ  G+  DI++FN
Sbjct: 515  MIDDAFDCFSEMFQWDVTPNDVTYNILIRSLCAIGDVARAMKLLRKMQATGINADIFSFN 574

Query: 361  ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
            ALI+ +CR  KI+KA++L  SML LGL PDN+TY AFI A CE  R  E   +LKSME  
Sbjct: 575  ALIQSFCRMKKIEKAEKLFNSMLRLGLDPDNYTYGAFIKALCESERFDEVIRMLKSMEAK 634

Query: 541  GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVP 669
            GC PD+YTCN  +E+LV+ G  +EA D+  +  ++G  LK +P
Sbjct: 635  GCIPDSYTCNLVLESLVQKGCLEEARDIAKRCNRRGTKLKVIP 677



 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 35/252 (13%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFN-----------------------------------TLIAGYYKLK 75
            ++  +G+LP+  TFN                                    LI   Y + 
Sbjct: 350  KLAGRGYLPDNSTFNLTMACLIKGLDLDETCLILDSFVELGVKLGFNTYLALIQALYNIG 409

Query: 76   DVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYN 255
               +  + +  +   GL  ++F+++ +ID  C A+    A   F EM   GI P  V++N
Sbjct: 410  KFVEGDQYLDQMAKDGLLANVFSYNMVIDSFCKASMMDRARKTFREMYLRGIAPTLVTFN 469

Query: 256  SLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTL 435
            ++I   C  G   KA + L  +   G  PDI+TF++LI   CR H ID A      M   
Sbjct: 470  TIISGHCKIGEVHKAKEFLVMLLESGFDPDIFTFSSLIDGLCRAHMIDDAFDCFSEMFQW 529

Query: 436  GLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEA 615
             + P++ TY   I + C  G +  A  LL+ M+  G   D ++ N+ I++  +  K ++A
Sbjct: 530  DVTPNDVTYNILIRSLCAIGDVARAMKLLRKMQATGINADIFSFNALIQSFCRMKKIEKA 589

Query: 616  TDVWLKYKQKGL 651
              ++    + GL
Sbjct: 590  EKLFNSMLRLGL 601



 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 45/140 (32%), Positives = 74/140 (52%)
 Frame = +1

Query: 226 GITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKA 405
           GI+P+   YN++I +L  S +   A    ++M  D  +PD +T+N LI   CR   +D+A
Sbjct: 180 GISPSTRLYNAVIDALIKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRTGVVDEA 239

Query: 406 QRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEA 585
            RL+K M  LG  P+ +TY   I+ FC   R+ EA  L++ M+     P+  T  S I  
Sbjct: 240 LRLVKQMEGLGYSPNVYTYTILIDGFCNARRVDEAFRLVEMMKKRNVIPNEATVRSLIHG 299

Query: 586 LVKSGKSQEATDVWLKYKQK 645
           + +     EA ++ + + +K
Sbjct: 300 VFRCVAPHEAFELLIMFLEK 319



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 3/200 (1%)
 Frame = +1

Query: 64  YKLKDVPKAREMVLM---LIDHGLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGIT 234
           Y L +   ARE  L    L   G  PD  TF+  +  L       +     +  VE G+ 
Sbjct: 333 YCLSNNSMAREAALFMKKLAGRGYLPDNSTFNLTMACLIKGLDLDETCLILDSFVELGVK 392

Query: 235 PNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRL 414
               +Y +LI++L   G   +  + L +M  DG+  +++++N +I  +C+   +D+A++ 
Sbjct: 393 LGFNTYLALIQALYNIGKFVEGDQYLDQMAKDGLLANVFSYNMVIDSFCKASMMDRARKT 452

Query: 415 LKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVK 594
            + M   G+ P   T+   I+  C+ G + +AK  L  +  +G  PD +T +S I+ L +
Sbjct: 453 FREMYLRGIAPTLVTFNTIISGHCKIGEVHKAKEFLVMLLESGFDPDIFTFSSLIDGLCR 512

Query: 595 SGKSQEATDVWLKYKQKGLT 654
           +    +A D + +  Q  +T
Sbjct: 513 AHMIDDAFDCFSEMFQWDVT 532



 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 45/176 (25%), Positives = 84/176 (47%)
 Frame = +1

Query: 121 GLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKA 300
           G+ P    ++ +ID L  +N    A+  F++M      P+  +YN LI  +C +G   +A
Sbjct: 180 GISPSTRLYNAVIDALIKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRTGVVDEA 239

Query: 301 MKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINA 480
           ++L+++M+  G  P++YT+  LI  +C   ++D+A RL++ M    + P+  T  + I+ 
Sbjct: 240 LRLVKQMEGLGYSPNVYTYTILIDGFCNARRVDEAFRLVEMMKKRNVIPNEATVRSLIHG 299

Query: 481 FCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKG 648
              C    EA  LL              C++ +  L  +  ++EA     K   +G
Sbjct: 300 VFRCVAPHEAFELLIMFLEKEPMMQKLACDTLLYCLSNNSMAREAALFMKKLAGRG 355



 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 52/217 (23%), Positives = 98/217 (45%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           QM   G+ PNV T+  LI G+   + V +A  +V M+    + P+  T  ++I G+    
Sbjct: 245 QMEGLGYSPNVYTYTILIDGFCNARRVDEAFRLVEMMKKRNVIPNEATVRSLIHGVFRCV 304

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
              +AF      +E       ++ ++L+  L  +  A +A   ++K+   G  PD  TFN
Sbjct: 305 APHEAFELLIMFLEKEPMMQKLACDTLLYCLSNNSMAREAALFMKKLAGRGYLPDNSTFN 364

Query: 361 ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
             +    +   +D+   +L S + LG++    TY+A I A    G+ +E    L  M  +
Sbjct: 365 LTMACLIKGLDLDETCLILDSFVELGVKLGFNTYLALIQALYNIGKFVEGDQYLDQMAKD 424

Query: 541 GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGL 651
           G   + ++ N  I++  K+     A   + +   +G+
Sbjct: 425 GLLANVFSYNMVIDSFCKASMMDRARKTFREMYLRGI 461



 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 54/224 (24%), Positives = 88/224 (39%), Gaps = 5/224 (2%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           Q++  G  P+   +N +I    K   +  A      +     KPD FT++ +I G+C   
Sbjct: 175 QISFLGISPSTRLYNAVIDALIKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRTG 234

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
              +A    ++M   G +PN  +Y  LI   C +    +A +L+  M+   V P+  T  
Sbjct: 235 VVDEALRLVKQMEGLGYSPNVYTYTILIDGFCNARRVDEAFRLVEMMKKRNVIPNEATVR 294

Query: 361 ALIKKYCRDHKIDKAQRLL-----KSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLK 525
           +LI    R     +A  LL     K  +   L  D   Y    N+        EA   +K
Sbjct: 295 SLIHGVFRCVAPHEAFELLIMFLEKEPMMQKLACDTLLYCLSNNSMAR-----EAALFMK 349

Query: 526 SMENNGCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTL 657
            +   G  PD  T N  +  L+K     E   +   + + G+ L
Sbjct: 350 KLAGRGYLPDNSTFNLTMACLIKGLDLDETCLILDSFVELGVKL 393



 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 1/169 (0%)
 Frame = +1

Query: 283 GNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTY 462
           G A    ++  ++   G+ P    +NA+I    + + +D A    + M     +PD FTY
Sbjct: 164 GLAKYCAEIFGQISFLGISPSTRLYNAVIDALIKSNSLDLAYLKFQQMSADNCKPDRFTY 223

Query: 463 IAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQ 642
              I+  C  G + EA  L+K ME  G  P+ YT    I+    + +  EA  +    K+
Sbjct: 224 NILIHGVCRTGVVDEALRLVKQMEGLGYSPNVYTYTILIDGFCNARRVDEAFRLVEMMKK 283

Query: 643 KGLTLKPVPSRSDASVVDCLSKR*TNFRCFV-NLRFELYM*FVLGQPKM 786
           + +       RS    V         FRC   +  FEL + F+  +P M
Sbjct: 284 RNVIPNEATVRSLIHGV---------FRCVAPHEAFELLIMFLEKEPMM 323


>ref|XP_006488870.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like [Citrus sinensis]
          Length = 721

 Score =  242 bits (618), Expect = 1e-61
 Identities = 114/223 (51%), Positives = 160/223 (71%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
            +M  +   PN+VTFNTLI+G+ K  +V K RE+++ML++ G KPD FTF+++ID LC A+
Sbjct: 497  EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 556

Query: 181  QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
            +  DA +C  EMVEWG+ PN ++YN LIRSLC  G+ +++++L +KMQ D + PDIYTFN
Sbjct: 557  RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 616

Query: 361  ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
            ALI+ +CR +KI+KA++   SMLTLGLRPDNF+Y A I A  + GR  EAK    SME N
Sbjct: 617  ALIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 676

Query: 541  GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVP 669
            GC PD+YT N  +E LV+ G+ +EA D+    K++G++ K  P
Sbjct: 677  GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFP 719



 Score = 97.4 bits (241), Expect = 5e-18
 Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
 Frame = +1

Query: 10   QKGFLPNVVTFNTLIAGYYKL-KDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQT 186
            ++G  P   T+  L+   YK  +DV   R +  +  D  L  ++ +++ +ID  C  N  
Sbjct: 430  KRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDR-LVSNVNSYNMVIDCFCKVNMM 488

Query: 187  VDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNAL 366
              A     EM +  I PN V++N+LI   C      K  +LL  +   G +PD +TFN++
Sbjct: 489  DRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSM 548

Query: 367  IKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGC 546
            I   CR H+ + A   L  M+  G+ P+  TY   I + C  G +  +  L + M+ +  
Sbjct: 549  IDCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRI 608

Query: 547  RPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGL 651
             PD YT N+ I++  +  K ++A   +      GL
Sbjct: 609  SPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTLGL 643



 Score = 94.4 bits (233), Expect = 5e-17
 Identities = 54/200 (27%), Positives = 95/200 (47%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           +M  +G+LP   TF+  +       D+ +   ++   I  G+KP   T+  +++ L  A 
Sbjct: 392 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 451

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
           + V+       + +  +  N  SYN +I   C      +A ++ R+M+   + P++ TFN
Sbjct: 452 RDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 511

Query: 361 ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
            LI  +C+D ++ K + LL  +L  G +PD FT+ + I+  C   R  +A   L  M   
Sbjct: 512 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 571

Query: 541 GCRPDAYTCNSFIEALVKSG 600
           G  P+  T N  I +L   G
Sbjct: 572 GVPPNTITYNILIRSLCAIG 591



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 41/140 (29%), Positives = 75/140 (53%)
 Frame = +1

Query: 226 GITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKA 405
           GI+P+   YN++I +L  S +   A    ++M +D  +PD +T+N LI   CR   +D+A
Sbjct: 222 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGVCRIGVVDEA 281

Query: 406 QRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEA 585
            RL+K M  LG  P+ +TY   I+ FC   R+ E   +L+ M+     P+  T  S +  
Sbjct: 282 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 341

Query: 586 LVKSGKSQEATDVWLKYKQK 645
           + +     +A ++ +++ ++
Sbjct: 342 VFRCLDPHKAFELLIRFMER 361



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 60/236 (25%), Positives = 105/236 (44%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           QM+     P+  T+N LI G  ++  V +A  +V  +   G  P+++T++ +IDG C A 
Sbjct: 252 QMSVDQCKPDRFTYNILIHGVCRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAK 311

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
           +  + F   E M E  + PN  +  SL+  +    +  KA +LL +             N
Sbjct: 312 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCN 371

Query: 361 ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
            L+ +   +    +A  +L+ M   G  P++ T+   +        + E  G+L +    
Sbjct: 372 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 431

Query: 541 GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVPSRSDASVVDCLSK 708
           G +P   T    +EAL K+G+  E  D +L +  K   +  V S +   V+DC  K
Sbjct: 432 GVKPRFSTYLLLMEALYKAGRDVEG-DRYLNHVFKDRLVSNVNSYN--MVIDCFCK 484



 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 42/176 (23%), Positives = 81/176 (46%)
 Frame = +1

Query: 121 GLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKA 300
           G+ P    ++ +ID L  +N    A+  F++M      P+  +YN LI  +C  G   +A
Sbjct: 222 GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGVCRIGVVDEA 281

Query: 301 MKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINA 480
           ++L+++M+  G  P++YT+  LI  +C   ++ +  R+L+ M    + P+  T  + ++ 
Sbjct: 282 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 341

Query: 481 FCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKG 648
              C    +A  LL              CN+ +  L  +  + EA  +  K   +G
Sbjct: 342 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 397



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 44/196 (22%), Positives = 92/196 (46%), Gaps = 3/196 (1%)
 Frame = +1

Query: 43  NTLIAGYYKLKDVPKAREMVLMLI---DHGLKPDLFTFSTIIDGLCLANQTVDAFNCFEE 213
           NTL+   Y+L +   A E   +L    D G  P+  TF   +  L       +     + 
Sbjct: 371 NTLL---YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 427

Query: 214 MVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHK 393
            ++ G+ P   +Y  L+ +L  +G   +  + L  +  D +  ++ ++N +I  +C+ + 
Sbjct: 428 FIKRGVKPRFSTYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNM 487

Query: 394 IDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNS 573
           +D+A  + + M    + P+  T+   I+  C+   + + + LL  +   G +PD +T NS
Sbjct: 488 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 547

Query: 574 FIEALVKSGKSQEATD 621
            I+ L ++ + ++A D
Sbjct: 548 MIDCLCRAHRFEDALD 563


>ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like isoform X1 [Glycine max]
            gi|571473276|ref|XP_006585877.1| PREDICTED: putative
            pentatricopeptide repeat-containing protein At3g16890,
            mitochondrial-like isoform X2 [Glycine max]
          Length = 678

 Score =  242 bits (618), Expect = 1e-61
 Identities = 114/223 (51%), Positives = 163/223 (73%)
 Frame = +1

Query: 4    MTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQ 183
            M  +G +PN+VTFNTLI G+ K   + KAR+++  L+++GLKPD+FTFS+I+DGLC   +
Sbjct: 455  MQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKR 514

Query: 184  TVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNA 363
            T +A  CF EM+EWGI PNAV YN LIRSLC  G+ ++++KLLR+MQ +G+ PD Y++NA
Sbjct: 515  TEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNA 574

Query: 364  LIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNG 543
            LI+ +CR +K++KA++L  SM   GL PDN+TY AFI A  E GR+ EAK +  SME NG
Sbjct: 575  LIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANG 634

Query: 544  CRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVPS 672
            C PD+Y CN  I+ LV+    +EA ++  + +QKG++L  +P+
Sbjct: 635  CSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGISLNSIPN 677



 Score =  122 bits (307), Expect = 1e-25
 Identities = 65/216 (30%), Positives = 116/216 (53%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
            Q+   G + NV ++N +I  + + K +  A E    +   G+ P+L TF+T+I+G C   
Sbjct: 419  QLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDG 478

Query: 181  QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
                A    E ++E G+ P+  +++S++  LC      +A++   +M   G+ P+   +N
Sbjct: 479  AIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYN 538

Query: 361  ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
             LI+  C    + ++ +LL+ M   G+ PD ++Y A I  FC   ++ +AK L  SM  +
Sbjct: 539  ILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRS 598

Query: 541  GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKG 648
            G  PD YT ++FIEAL +SG+ +EA  ++   +  G
Sbjct: 599  GLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANG 634



 Score =  104 bits (260), Expect = 3e-20
 Identities = 59/213 (27%), Positives = 107/213 (50%)
 Frame = +1

Query: 16  GFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTVDA 195
           G+ P    FN ++A   K  ++ +  ++  +L   G+K  +  +  +I+ L       + 
Sbjct: 354 GYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEG 413

Query: 196 FNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKK 375
              + +++  G+  N  SYN +I   C +     A +  R MQ+ GV P++ TFN LI  
Sbjct: 414 DRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLING 473

Query: 376 YCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPD 555
           +C+D  IDKA++LL+S+L  GL+PD FT+ + ++  C+  R  EA      M   G  P+
Sbjct: 474 HCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPN 533

Query: 556 AYTCNSFIEALVKSGKSQEATDVWLKYKQKGLT 654
           A   N  I +L   G    +  +  + +++G++
Sbjct: 534 AVIYNILIRSLCTIGDVARSVKLLRRMQKEGIS 566



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 39/147 (26%), Positives = 76/147 (51%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           +M + G  PN V +N LI     + DV ++ +++  +   G+ PD ++++ +I   C  N
Sbjct: 524 EMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMN 583

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
           +   A   F+ M   G+ P+  +Y++ I +L  SG   +A K+   M+ +G  PD Y  N
Sbjct: 584 KVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICN 643

Query: 361 ALIKKYCRDHKIDKAQRLLKSMLTLGL 441
            +IK   +   +++AQ +++     G+
Sbjct: 644 LIIKILVQQEYVEEAQNIIERCRQKGI 670



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 39/133 (29%), Positives = 69/133 (51%)
 Frame = +1

Query: 226 GITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKA 405
           G++P    YN+LI +L  S +   A    ++M  D    D +T+N LI   C+   +D+A
Sbjct: 174 GLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEA 233

Query: 406 QRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEA 585
            RL++ M   G  P+ FTY   I  FC   R+ EA G+ ++M+++G  P+  T  + +  
Sbjct: 234 LRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHG 293

Query: 586 LVKSGKSQEATDV 624
           + +     +A ++
Sbjct: 294 VFRCVDPSKALEL 306



 Score = 67.4 bits (163), Expect = 6e-09
 Identities = 35/104 (33%), Positives = 61/104 (58%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           QM     + +  T+NTLI G  K+  V +A  +V  + D G  P++FT++ +I+G C+A+
Sbjct: 204 QMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIAS 263

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLL 312
           +  +AF  FE M + G+ PN  +  +L+  +    + SKA++LL
Sbjct: 264 RVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELL 307



 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 34/124 (27%), Positives = 67/124 (54%)
 Frame = +1

Query: 121 GLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKA 300
           GL P    ++ +ID L  +N    A+  F++M       +  +YN+LI  +C  G   +A
Sbjct: 174 GLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEA 233

Query: 301 MKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINA 480
           ++L+R+M+  G  P+++T+  LI+ +C   ++D+A  + ++M   G+ P+  T  A ++ 
Sbjct: 234 LRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHG 293

Query: 481 FCEC 492
              C
Sbjct: 294 VFRC 297



 Score = 63.5 bits (153), Expect = 9e-08
 Identities = 53/225 (23%), Positives = 85/225 (37%), Gaps = 8/225 (3%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           Q++  G  P    +N LI    K   +  A      +       D FT++T+I G+C   
Sbjct: 169 QISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVG 228

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
              +A     +M + G  PN  +Y  LI   CI+    +A  +   M+  GV P+  T  
Sbjct: 229 VVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVR 288

Query: 361 ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSM--- 531
           AL+    R     KA  LL   L      +   ++   +    C   L    + K M   
Sbjct: 289 ALVHGVFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYC---LANNSMAKEMVVF 345

Query: 532 -----ENNGCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGL 651
                   G  P     N  +  LVK  + +E  DV+   +++G+
Sbjct: 346 LRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGV 390


>ref|XP_004509597.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like isoform X1 [Cicer
            arietinum] gi|502154141|ref|XP_004509598.1| PREDICTED:
            putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like isoform X2 [Cicer
            arietinum] gi|502154144|ref|XP_004509599.1| PREDICTED:
            putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like isoform X3 [Cicer
            arietinum]
          Length = 674

 Score =  242 bits (617), Expect = 1e-61
 Identities = 113/224 (50%), Positives = 162/224 (72%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
            +M  +GF PN+VTFNTLI G+ K   + KARE++  L+++ LKPD+FTFS++IDGLC   
Sbjct: 450  EMQLRGFAPNLVTFNTLINGHCKDGAIIKARELLETLLENELKPDIFTFSSMIDGLCRIK 509

Query: 181  QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
            +T +AF CF EM+EWGI PNA+ YN LIRSLC  G   +++KL R+MQ +G+ PD Y++N
Sbjct: 510  RTEEAFECFNEMIEWGINPNAIIYNILIRSLCGIGETVRSLKLFRRMQEEGISPDTYSYN 569

Query: 361  ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
            ALI+ +CR +K++KAQ+L +SML  GL PDN+TY AFI A  + GR+ +AK +  SME N
Sbjct: 570  ALIQIFCRMNKVEKAQKLFESMLKSGLNPDNYTYSAFIEALSQSGRLDDAKKIFYSMEAN 629

Query: 541  GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVPS 672
            GC PD+Y CN  ++ L++    +EA  V  + +QKG++L  +P+
Sbjct: 630  GCSPDSYLCNLIVKTLIRQDHVEEARKVVERCRQKGISLNCIPN 673



 Score =  116 bits (291), Expect = 9e-24
 Identities = 62/216 (28%), Positives = 115/216 (53%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
            +M   G + NV+++N LI  + +   + KA ++   +   G  P+L TF+T+I+G C   
Sbjct: 415  KMISDGLISNVISYNMLINCFCRSNLMDKASDIFREMQLRGFAPNLVTFNTLINGHCKDG 474

Query: 181  QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
              + A    E ++E  + P+  +++S+I  LC      +A +   +M   G+ P+   +N
Sbjct: 475  AIIKARELLETLLENELKPDIFTFSSMIDGLCRIKRTEEAFECFNEMIEWGINPNAIIYN 534

Query: 361  ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
             LI+  C   +  ++ +L + M   G+ PD ++Y A I  FC   ++ +A+ L +SM  +
Sbjct: 535  ILIRSLCGIGETVRSLKLFRRMQEEGISPDTYSYNALIQIFCRMNKVEKAQKLFESMLKS 594

Query: 541  GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKG 648
            G  PD YT ++FIEAL +SG+  +A  ++   +  G
Sbjct: 595  GLNPDNYTYSAFIEALSQSGRLDDAKKIFYSMEANG 630



 Score =  115 bits (288), Expect = 2e-23
 Identities = 64/214 (29%), Positives = 115/214 (53%)
 Frame = +1

Query: 13  KGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTVD 192
           +G++P+   FN ++A   K  +V +A E+  +L   G+KP + T+  +++     ++  D
Sbjct: 349 RGYVPDSSIFNVVMACLVKGVEVREACEVFEILRKQGVKPSIGTYLALVEASYNNDRRED 408

Query: 193 AFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIK 372
                ++M+  G+  N +SYN LI   C S    KA  + R+MQ+ G  P++ TFN LI 
Sbjct: 409 GDQISDKMISDGLISNVISYNMLINCFCRSNLMDKASDIFREMQLRGFAPNLVTFNTLIN 468

Query: 373 KYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRP 552
            +C+D  I KA+ LL+++L   L+PD FT+ + I+  C   R  EA      M   G  P
Sbjct: 469 GHCKDGAIIKARELLETLLENELKPDIFTFSSMIDGLCRIKRTEEAFECFNEMIEWGINP 528

Query: 553 DAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLT 654
           +A   N  I +L   G++  +  ++ + +++G++
Sbjct: 529 NAIIYNILIRSLCGIGETVRSLKLFRRMQEEGIS 562



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 51/199 (25%), Positives = 105/199 (52%), Gaps = 3/199 (1%)
 Frame = +1

Query: 64  YKLKDVPKAREMVLML---IDHGLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGIT 234
           Y L     A+E+++ +   +D G  PD   F+ ++  L    +  +A   FE + + G+ 
Sbjct: 328 YCLASNSMAKEIIVFMRKALDRGYVPDSSIFNVVMACLVKGVEVREACEVFEILRKQGVK 387

Query: 235 PNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRL 414
           P+  +Y +L+ +   +       ++  KM  DG+  ++ ++N LI  +CR + +DKA  +
Sbjct: 388 PSIGTYLALVEASYNNDRREDGDQISDKMISDGLISNVISYNMLINCFCRSNLMDKASDI 447

Query: 415 LKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVK 594
            + M   G  P+  T+   IN  C+ G I++A+ LL+++  N  +PD +T +S I+ L +
Sbjct: 448 FREMQLRGFAPNLVTFNTLINGHCKDGAIIKARELLETLLENELKPDIFTFSSMIDGLCR 507

Query: 595 SGKSQEATDVWLKYKQKGL 651
             +++EA + + +  + G+
Sbjct: 508 IKRTEEAFECFNEMIEWGI 526



 Score = 74.3 bits (181), Expect = 5e-11
 Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 36/252 (14%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           QM      P+ +T+N LI G  K+  V +A  ++  +   G+ P++FT++ +IDG C A 
Sbjct: 204 QMIGDHCFPDRITYNVLIHGVCKIGVVDEAIRLIRQMKGKGIFPNVFTYTILIDGFCNAK 263

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLL---------------- 312
           +  +AF   E+M E  ++ N  +  +L+  +    +ASKA +LL                
Sbjct: 264 RVDEAFGVLEKMKESKVSANDATVRTLVHGVFRCVDASKAFELLSEFLDKDDVFFGKVAC 323

Query: 313 --------------------RKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLT 432
                               RK    G  PD   FN ++    +  ++ +A  + + +  
Sbjct: 324 DTLLYCLASNSMAKEIIVFMRKALDRGYVPDSSIFNVVMACLVKGVEVREACEVFEILRK 383

Query: 433 LGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQE 612
            G++P   TY+A + A     R  +   +   M ++G   +  + N  I    +S    +
Sbjct: 384 QGVKPSIGTYLALVEASYNNDRREDGDQISDKMISDGLISNVISYNMLINCFCRSNLMDK 443

Query: 613 ATDVWLKYKQKG 648
           A+D++ + + +G
Sbjct: 444 ASDIFREMQLRG 455



 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 47/160 (29%), Positives = 80/160 (50%)
 Frame = +1

Query: 166 LCLANQTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPD 345
           L LA   VD F+    +   GI+P    YNSL+ +L  S +   A    ++M  D   PD
Sbjct: 157 LGLAKYCVDVFSQISIL---GISPTTRLYNSLMDALVKSNSVDLAYHKFQQMIGDHCFPD 213

Query: 346 IYTFNALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLK 525
             T+N LI   C+   +D+A RL++ M   G+ P+ FTY   I+ FC   R+ EA G+L+
Sbjct: 214 RITYNVLIHGVCKIGVVDEAIRLIRQMKGKGIFPNVFTYTILIDGFCNAKRVDEAFGVLE 273

Query: 526 SMENNGCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQK 645
            M+ +    +  T  + +  + +   + +A ++  ++  K
Sbjct: 274 KMKESKVSANDATVRTLVHGVFRCVDASKAFELLSEFLDK 313



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 6/223 (2%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           Q++  G  P    +N+L+    K   V  A      +I     PD  T++ +I G+C   
Sbjct: 169 QISILGISPTTRLYNSLMDALVKSNSVDLAYHKFQQMIGDHCFPDRITYNVLIHGVCKIG 228

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
              +A     +M   GI PN  +Y  LI   C +    +A  +L KM+   V  +  T  
Sbjct: 229 VVDEAIRLIRQMKGKGIFPNVFTYTILIDGFCNAKRVDEAFGVLEKMKESKVSANDATVR 288

Query: 361 ALIKKYCRDHKIDKAQRLLKSMLTLG------LRPDNFTYIAFINAFCECGRILEAKGLL 522
            L+    R     KA  LL   L         +  D   Y    N+  +     E    +
Sbjct: 289 TLVHGVFRCVDASKAFELLSEFLDKDDVFFGKVACDTLLYCLASNSMAK-----EIIVFM 343

Query: 523 KSMENNGCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGL 651
           +   + G  PD+   N  +  LVK  + +EA +V+   +++G+
Sbjct: 344 RKALDRGYVPDSSIFNVVMACLVKGVEVREACEVFEILRKQGV 386


>ref|XP_006419430.1| hypothetical protein CICLE_v10006939mg [Citrus clementina]
           gi|557521303|gb|ESR32670.1| hypothetical protein
           CICLE_v10006939mg [Citrus clementina]
          Length = 695

 Score =  241 bits (614), Expect = 3e-61
 Identities = 113/223 (50%), Positives = 160/223 (71%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           +M  +   PN+VTFNTLI+G+ K  +V K RE+++ML++ G KPD FTF+++ID LC A+
Sbjct: 328 EMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAH 387

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
           +  DA +C  EMVEWG+ PN ++YN LIRSLC  G+ +++++L +KMQ D + PDIYTFN
Sbjct: 388 RFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFN 447

Query: 361 ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
           ALI+ +CR +KI+KA++   SML+LGLRPDNF+Y A I A  + GR  EAK    SME N
Sbjct: 448 ALIQSFCRMNKIEKAEKAFFSMLSLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQN 507

Query: 541 GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVP 669
           GC PD+YT N  +E LV+ G+ +EA D+    K++G++ K  P
Sbjct: 508 GCNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGISFKSFP 550



 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 58/214 (27%), Positives = 99/214 (46%)
 Frame = +1

Query: 10  QKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTV 189
           ++G  P   T+  L+   YK     +    +  +   GL  ++ +++ +ID  C  N   
Sbjct: 261 KRGVKPRFSTYLLLMEALYKAGGDVEGDRYLNHVFKDGLVSNVNSYNMVIDCFCKVNMMD 320

Query: 190 DAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALI 369
            A     EM +  I PN V++N+LI   C      K  +LL  +   G +PD +TFN++I
Sbjct: 321 RATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMI 380

Query: 370 KKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCR 549
              CR H+ + A   L  M+  G+ P+  TY   I + C  G +  +  L + M+ +   
Sbjct: 381 DCLCRAHRFEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRIS 440

Query: 550 PDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGL 651
           PD YT N+ I++  +  K ++A   +      GL
Sbjct: 441 PDIYTFNALIQSFCRMNKIEKAEKAFFSMLSLGL 474



 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 55/200 (27%), Positives = 95/200 (47%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           +M  +G+LP   TF+  +       D+ +   ++   I  G+KP   T+  +++ L  A 
Sbjct: 223 KMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRFSTYLLLMEALYKAG 282

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
             V+       + + G+  N  SYN +I   C      +A ++ R+M+   + P++ TFN
Sbjct: 283 GDVEGDRYLNHVFKDGLVSNVNSYNMVIDCFCKVNMMDRATEICREMRDRDIAPNLVTFN 342

Query: 361 ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
            LI  +C+D ++ K + LL  +L  G +PD FT+ + I+  C   R  +A   L  M   
Sbjct: 343 TLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHRFEDALDCLSEMVEW 402

Query: 541 GCRPDAYTCNSFIEALVKSG 600
           G  P+  T N  I +L   G
Sbjct: 403 GVPPNTITYNILIRSLCAIG 422



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 41/140 (29%), Positives = 75/140 (53%)
 Frame = +1

Query: 226 GITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKA 405
           GI+P+   YN++I +L  S +   A    ++M +D  +PD +T+N LI   CR   +D+A
Sbjct: 53  GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGVCRIGVVDEA 112

Query: 406 QRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEA 585
            RL+K M  LG  P+ +TY   I+ FC   R+ E   +L+ M+     P+  T  S +  
Sbjct: 113 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 172

Query: 586 LVKSGKSQEATDVWLKYKQK 645
           + +     +A ++ +++ ++
Sbjct: 173 VFRCLDPHKAFELLIRFMER 192



 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 60/236 (25%), Positives = 104/236 (44%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           QM+     P+  T+N LI G  ++  V +A  +V  +   G  P+++T++ +IDG C A 
Sbjct: 83  QMSVDQCKPDRFTYNILIHGVCRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAK 142

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
           +  + F   E M E  + PN  +  SL+  +    +  KA +LL +             N
Sbjct: 143 RVAEVFRVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCN 202

Query: 361 ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
            L+ +   +    +A  +L+ M   G  P++ T+   +        + E  G+L +    
Sbjct: 203 TLLYRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKR 262

Query: 541 GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVPSRSDASVVDCLSK 708
           G +P   T    +EAL K+G   E  D +L +  K   +  V S +   V+DC  K
Sbjct: 263 GVKPRFSTYLLLMEALYKAGGDVEG-DRYLNHVFKDGLVSNVNSYN--MVIDCFCK 315



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 45/196 (22%), Positives = 93/196 (47%), Gaps = 3/196 (1%)
 Frame = +1

Query: 43  NTLIAGYYKLKDVPKAREMVLMLI---DHGLKPDLFTFSTIIDGLCLANQTVDAFNCFEE 213
           NTL+   Y+L +   A E   +L    D G  P+  TF   +  L       +     + 
Sbjct: 202 NTLL---YRLSNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDT 258

Query: 214 MVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHK 393
            ++ G+ P   +Y  L+ +L  +G   +  + L  +  DG+  ++ ++N +I  +C+ + 
Sbjct: 259 FIKRGVKPRFSTYLLLMEALYKAGGDVEGDRYLNHVFKDGLVSNVNSYNMVIDCFCKVNM 318

Query: 394 IDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNS 573
           +D+A  + + M    + P+  T+   I+  C+   + + + LL  +   G +PD +T NS
Sbjct: 319 MDRATEICREMRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNS 378

Query: 574 FIEALVKSGKSQEATD 621
            I+ L ++ + ++A D
Sbjct: 379 MIDCLCRAHRFEDALD 394



 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 42/176 (23%), Positives = 81/176 (46%)
 Frame = +1

Query: 121 GLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKA 300
           G+ P    ++ +ID L  +N    A+  F++M      P+  +YN LI  +C  G   +A
Sbjct: 53  GISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQCKPDRFTYNILIHGVCRIGVVDEA 112

Query: 301 MKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINA 480
           ++L+++M+  G  P++YT+  LI  +C   ++ +  R+L+ M    + P+  T  + ++ 
Sbjct: 113 LRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVFRVLEIMKERNVCPNEATVRSLVHG 172

Query: 481 FCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKG 648
              C    +A  LL              CN+ +  L  +  + EA  +  K   +G
Sbjct: 173 VFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRLSNNSMASEAAAILRKMGDRG 228


>ref|XP_007224454.1| hypothetical protein PRUPE_ppa022157mg [Prunus persica]
            gi|462421390|gb|EMJ25653.1| hypothetical protein
            PRUPE_ppa022157mg [Prunus persica]
          Length = 604

 Score =  236 bits (602), Expect = 7e-60
 Identities = 106/207 (51%), Positives = 155/207 (74%)
 Frame = +1

Query: 4    MTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQ 183
            M +KG  P +VTFNTL+ GY K+ +V KA E++ +L++HG KPD+FTFS+IIDGLC  N+
Sbjct: 390  MQRKGIPPTLVTFNTLLNGYCKVGEVGKAHELLALLLEHGFKPDMFTFSSIIDGLCRLNR 449

Query: 184  TVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNA 363
              DAF CF EMV WG+TPNA++YN LIR+LC  G+ +++M L+++M+ DG++PD Y+FNA
Sbjct: 450  IDDAFECFAEMVRWGVTPNAITYNILIRALCFIGDIARSMGLMKRMEADGIKPDAYSFNA 509

Query: 364  LIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNG 543
            LI+  CR +K++KA+ L  +MLTLGL PDN+TY AFI A C+ G++  AK +  SME  G
Sbjct: 510  LIQCLCRMNKVEKAEELFLAMLTLGLNPDNYTYSAFIKALCDSGKLDVAKEIFLSMEAYG 569

Query: 544  CRPDAYTCNSFIEALVKSGKSQEATDV 624
            C PD+  C+  +++LV++ + +EA  +
Sbjct: 570  CFPDSSICDIILDSLVRNARVEEARSI 596



 Score =  128 bits (321), Expect = 3e-27
 Identities = 70/214 (32%), Positives = 112/214 (52%)
 Frame = +1

Query: 10  QKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTV 189
           Q+G  P   T+  LI   YK     +   +   +I  GL  ++F+++ +ID  C A    
Sbjct: 322 QRGVKPGFSTYLQLIEAMYKAGQGDEGNRIFDQMIKEGLVSNVFSYNMVIDCFCKAKMMD 381

Query: 190 DAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALI 369
            A   F +M   GI P  V++N+L+   C  G   KA +LL  +   G +PD++TF+++I
Sbjct: 382 RASKAFGDMQRKGIPPTLVTFNTLLNGYCKVGEVGKAHELLALLLEHGFKPDMFTFSSII 441

Query: 370 KKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCR 549
              CR ++ID A      M+  G+ P+  TY   I A C  G I  + GL+K ME +G +
Sbjct: 442 DGLCRLNRIDDAFECFAEMVRWGVTPNAITYNILIRALCFIGDIARSMGLMKRMEADGIK 501

Query: 550 PDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGL 651
           PDAY+ N+ I+ L +  K ++A +++L     GL
Sbjct: 502 PDAYSFNALIQCLCRMNKVEKAEELFLAMLTLGL 535



 Score = 90.1 bits (222), Expect = 9e-16
 Identities = 56/252 (22%), Positives = 114/252 (45%), Gaps = 34/252 (13%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLC--- 171
           QM      P+  T+NTLI G  K+  V +A  ++  +   G  P++ T++ +I G C   
Sbjct: 215 QMPADNCNPDRFTYNTLIHGVCKIGIVDEALRLLKQMEGLGYLPNVCTYTILIGGFCNSK 274

Query: 172 -------------------------------LANQTVDAFNCFEEMVEWGITPNAVSYNS 258
                                          LAN   +    FE  ++ G+ P   +Y  
Sbjct: 275 RVDEAFRVLEIMKEKNVSPNEATIRSLVHGELANPQNEVQEIFESFIQRGVKPGFSTYLQ 334

Query: 259 LIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLG 438
           LI ++  +G   +  ++  +M  +G+  +++++N +I  +C+   +D+A +    M   G
Sbjct: 335 LIEAMYKAGQGDEGNRIFDQMIKEGLVSNVFSYNMVIDCFCKAKMMDRASKAFGDMQRKG 394

Query: 439 LRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEAT 618
           + P   T+   +N +C+ G + +A  LL  +  +G +PD +T +S I+ L +  +  +A 
Sbjct: 395 IPPTLVTFNTLLNGYCKVGEVGKAHELLALLLEHGFKPDMFTFSSIIDGLCRLNRIDDAF 454

Query: 619 DVWLKYKQKGLT 654
           + + +  + G+T
Sbjct: 455 ECFAEMVRWGVT 466



 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 37/140 (26%), Positives = 76/140 (54%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           +M + G  PN +T+N LI     + D+ ++  ++  +   G+KPD ++F+ +I  LC  N
Sbjct: 459 EMVRWGVTPNAITYNILIRALCFIGDIARSMGLMKRMEADGIKPDAYSFNALIQCLCRMN 518

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
           +   A   F  M+  G+ P+  +Y++ I++LC SG    A ++   M+  G  PD    +
Sbjct: 519 KVEKAEELFLAMLTLGLNPDNYTYSAFIKALCDSGKLDVAKEIFLSMEAYGCFPDSSICD 578

Query: 361 ALIKKYCRDHKIDKAQRLLK 420
            ++    R+ ++++A+ ++K
Sbjct: 579 IILDSLVRNARVEEARSIIK 598



 Score = 73.6 bits (179), Expect = 8e-11
 Identities = 49/206 (23%), Positives = 90/206 (43%)
 Frame = +1

Query: 34  VTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTVDAFNCFEE 213
           V  N+L   Y K + +P               PD FT++T+I G+C      +A    ++
Sbjct: 201 VKSNSLDLAYLKFQQMPA----------DNCNPDRFTYNTLIHGVCKIGIVDEALRLLKQ 250

Query: 214 MVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHK 393
           M   G  PN  +Y  LI   C S    +A ++L  M+   V P+  T  +L+     + +
Sbjct: 251 MEGLGYLPNVCTYTILIGGFCNSKRVDEAFRVLEIMKEKNVSPNEATIRSLVHGELANPQ 310

Query: 394 IDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNS 573
            ++ Q + +S +  G++P   TY+  I A  + G+  E   +   M   G   + ++ N 
Sbjct: 311 -NEVQEIFESFIQRGVKPGFSTYLQLIEAMYKAGQGDEGNRIFDQMIKEGLVSNVFSYNM 369

Query: 574 FIEALVKSGKSQEATDVWLKYKQKGL 651
            I+   K+     A+  +   ++KG+
Sbjct: 370 VIDCFCKAKMMDRASKAFGDMQRKGI 395



 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 40/131 (30%), Positives = 63/131 (48%)
 Frame = +1

Query: 259 LIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLG 438
           LI S   S +   A    ++M  D   PD +T+N LI   C+   +D+A RLLK M  LG
Sbjct: 196 LISSWVKSNSLDLAYLKFQQMPADNCNPDRFTYNTLIHGVCKIGIVDEALRLLKQMEGLG 255

Query: 439 LRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEAT 618
             P+  TY   I  FC   R+ EA  +L+ M+     P+  T  S +   + +    E  
Sbjct: 256 YLPNVCTYTILIGGFCNSKRVDEAFRVLEIMKEKNVSPNEATIRSLVHGEL-ANPQNEVQ 314

Query: 619 DVWLKYKQKGL 651
           +++  + Q+G+
Sbjct: 315 EIFESFIQRGV 325


>ref|XP_004299932.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like [Fragaria vesca subsp.
            vesca]
          Length = 674

 Score =  224 bits (571), Expect = 3e-56
 Identities = 101/204 (49%), Positives = 145/204 (71%)
 Frame = +1

Query: 4    MTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQ 183
            M   G  P +VTFNTL+AGY K  +V KA E+++ML++HG KPD+FTFSTIIDGLC  NQ
Sbjct: 459  MPHNGIPPTLVTFNTLLAGYCKAGEVSKAHELLIMLLEHGFKPDIFTFSTIIDGLCRVNQ 518

Query: 184  TVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNA 363
              DAF+CF EMV WGITPN ++YN L+RSLC  G+ ++A +L+  MQ+DG++PD Y+F+ 
Sbjct: 519  IDDAFDCFSEMVRWGITPNVITYNILLRSLCFIGDIARAERLMENMQVDGIKPDSYSFSH 578

Query: 364  LIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNG 543
            LI+ +CR +K++KA+     ML  GL PDN+TY  FI A C+ G++  AK +  SME   
Sbjct: 579  LIQSFCRMNKVEKAEEHFLVMLKSGLNPDNYTYSVFIKALCDLGKLDVAKEIFLSMEAYD 638

Query: 544  CRPDAYTCNSFIEALVKSGKSQEA 615
            C P++  C+  +++L++  + +EA
Sbjct: 639  CLPNSSLCSIMLDSLIQHNRFEEA 662



 Score =  111 bits (277), Expect = 4e-22
 Identities = 62/214 (28%), Positives = 112/214 (52%)
 Frame = +1

Query: 10   QKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTV 189
            Q G  P   T+  LI   YK  ++ +  ++   L+   L   + +++ +I+  C A    
Sbjct: 391  QGGGKPGFGTYLVLIEAMYKSGNIDEGNQIFEQLVKDELLSSVHSYNMVINCFCKAQILD 450

Query: 190  DAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALI 369
             A   F +M   GI P  V++N+L+   C +G  SKA +LL  +   G +PDI+TF+ +I
Sbjct: 451  RASRAFGDMPHNGIPPTLVTFNTLLAGYCKAGEVSKAHELLIMLLEHGFKPDIFTFSTII 510

Query: 370  KKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCR 549
               CR ++ID A      M+  G+ P+  TY   + + C  G I  A+ L+++M+ +G +
Sbjct: 511  DGLCRVNQIDDAFDCFSEMVRWGITPNVITYNILLRSLCFIGDIARAERLMENMQVDGIK 570

Query: 550  PDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGL 651
            PD+Y+ +  I++  +  K ++A + +L   + GL
Sbjct: 571  PDSYSFSHLIQSFCRMNKVEKAEEHFLVMLKSGL 604



 Score = 84.3 bits (207), Expect = 5e-14
 Identities = 47/175 (26%), Positives = 86/175 (49%)
 Frame = +1

Query: 4    MTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQ 183
            + + GF P++ TF+T+I G  ++  +  A +    ++  G+ P++ T++ ++  LC    
Sbjct: 494  LLEHGFKPDIFTFSTIIDGLCRVNQIDDAFDCFSEMVRWGITPNVITYNILLRSLCFIGD 553

Query: 184  TVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNA 363
               A    E M   GI P++ S++ LI+S C      KA +    M   G+ PD YT++ 
Sbjct: 554  IARAERLMENMQVDGIKPDSYSFSHLIQSFCRMNKVEKAEEHFLVMLKSGLNPDNYTYSV 613

Query: 364  LIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKS 528
             IK  C   K+D A+ +  SM      P++      +++  +  R  EA  ++KS
Sbjct: 614  FIKALCDLGKLDVAKEIFLSMEAYDCLPNSSLCSIMLDSLIQHNRFEEACRMVKS 668



 Score = 80.1 bits (196), Expect = 9e-13
 Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 7/204 (3%)
 Frame = +1

Query: 64  YKLKDVPKAREMVLMLIDHGLK---PDLFTFSTIIDGLCLANQTVDAFN----CFEEMVE 222
           Y L +   +RE+ L L   G K   PD  TF+  I  +CL  +   A N     FE  ++
Sbjct: 334 YCLANNHMSREIALFLKKFGAKGYLPDSSTFN--ITMVCLTKELAHAQNEVHELFENYIQ 391

Query: 223 WGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDK 402
            G  P   +Y  LI ++  SGN  +  ++  ++  D +   ++++N +I  +C+   +D+
Sbjct: 392 GGGKPGFGTYLVLIEAMYKSGNIDEGNQIFEQLVKDELLSSVHSYNMVINCFCKAQILDR 451

Query: 403 AQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIE 582
           A R    M   G+ P   T+   +  +C+ G + +A  LL  +  +G +PD +T ++ I+
Sbjct: 452 ASRAFGDMPHNGIPPTLVTFNTLLAGYCKAGEVSKAHELLIMLLEHGFKPDIFTFSTIID 511

Query: 583 ALVKSGKSQEATDVWLKYKQKGLT 654
            L +  +  +A D + +  + G+T
Sbjct: 512 GLCRVNQIDDAFDCFSEMVRWGIT 535



 Score = 70.9 bits (172), Expect = 5e-10
 Identities = 36/143 (25%), Positives = 75/143 (52%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           +M + G  PNV+T+N L+     + D+ +A  ++  +   G+KPD ++FS +I   C  N
Sbjct: 528 EMVRWGITPNVITYNILLRSLCFIGDIARAERLMENMQVDGIKPDSYSFSHLIQSFCRMN 587

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
           +   A   F  M++ G+ P+  +Y+  I++LC  G    A ++   M+     P+    +
Sbjct: 588 KVEKAEEHFLVMLKSGLNPDNYTYSVFIKALCDLGKLDVAKEIFLSMEAYDCLPNSSLCS 647

Query: 361 ALIKKYCRDHKIDKAQRLLKSML 429
            ++    + ++ ++A R++KS +
Sbjct: 648 IMLDSLIQHNRFEEACRMVKSFV 670



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 40/137 (29%), Positives = 68/137 (49%)
 Frame = +1

Query: 226 GITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKA 405
           G+T +   YN++I +L  S +   A    ++M  D   PD +T+N LI   C+   +D+A
Sbjct: 181 GLTLSTRLYNAVINALVKSNSLDLAYLKFQQMPADNCHPDRFTYNILIHGVCKIGIVDEA 240

Query: 406 QRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEA 585
            RL+K M  LG  P+  TY   ++ FC+  R+ EA  ++K M      P+  T  S +  
Sbjct: 241 VRLVKQMEGLGYLPNVHTYTNLVDGFCKSKRVDEAFRVIKLMRYKNVTPNEATVRSLVHG 300

Query: 586 LVKSGKSQEATDVWLKY 636
           +       +A ++ L +
Sbjct: 301 VFHCMDPGKAFELLLSF 317



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 55/217 (25%), Positives = 92/217 (42%), Gaps = 8/217 (3%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           QM      P+  T+N LI G  K+  V +A  +V  +   G  P++ T++ ++DG C + 
Sbjct: 211 QMPADNCHPDRFTYNILIHGVCKIGIVDEAVRLVKQMEGLGYLPNVHTYTNLVDGFCKSK 270

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
           +  +AF   + M    +TPN  +  SL+  +    +  KA +LL    +  V+ +   F 
Sbjct: 271 RVDEAFRVIKLMRYKNVTPNEATVRSLVHGVFHCMDPGKAFELL----LSFVEGESLLFK 326

Query: 361 ALIKK--YC--RDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKG---- 516
                  YC   +H   +    LK     G  PD+ T+   I   C    +  A+     
Sbjct: 327 VACDTILYCLANNHMSREIALFLKKFGAKGYLPDSSTF--NITMVCLTKELAHAQNEVHE 384

Query: 517 LLKSMENNGCRPDAYTCNSFIEALVKSGKSQEATDVW 627
           L ++    G +P   T    IEA+ KSG   E   ++
Sbjct: 385 LFENYIQGGGKPGFGTYLVLIEAMYKSGNIDEGNQIF 421


>ref|XP_006858848.1| hypothetical protein AMTR_s00066p00184190 [Amborella trichopoda]
            gi|548862959|gb|ERN20315.1| hypothetical protein
            AMTR_s00066p00184190 [Amborella trichopoda]
          Length = 721

 Score =  217 bits (552), Expect = 5e-54
 Identities = 102/216 (47%), Positives = 147/216 (68%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
            +M +KG+ P +VTFNTLI GY K + V KARE++LML++   KPD+ TFS+II+GLC   
Sbjct: 500  EMIEKGYTPTLVTFNTLIDGYCKSERVEKARELLLMLLNLQFKPDVITFSSIINGLCRIG 559

Query: 181  QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
            Q  DAF CF EMVEWG++PNA++YN +I SLC+ G   +++KLL++M+  G+ PD++++N
Sbjct: 560  QLDDAFKCFNEMVEWGVSPNALTYNIMIHSLCVMGEMGRSLKLLKEMESQGITPDVFSYN 619

Query: 361  ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
            A+I   C+   ++ AQ +  SML  G+ PD++TY AFI   C   R  EAK LL  ME N
Sbjct: 620  AVILNLCKIGNLEMAQNIFSSMLKSGVTPDHYTYNAFIKVLCNSKRTDEAKELLGVMEAN 679

Query: 541  GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKG 648
            GC P+ Y+    ++ L + G  QEA ++  K+K KG
Sbjct: 680  GCVPNCYSYGLIVDTLSRQGCFQEAQELISKFKSKG 715



 Score =  101 bits (251), Expect = 4e-19
 Identities = 62/215 (28%), Positives = 108/215 (50%)
 Frame = +1

Query: 10   QKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTV 189
            ++G  P   ++  L +G Y +    +    V  L+  GL   ++ ++++ID         
Sbjct: 433  ERGGKPCFDSYIILTSGLYGVGRNKEGDLYVGYLVLDGLLCSVYAYNSLIDTFSKLRLMN 492

Query: 190  DAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALI 369
             A   F+EM+E G TP  V++N+LI   C S    KA +LL  +     +PD+ TF+++I
Sbjct: 493  RASQFFDEMIEKGYTPTLVTFNTLIDGYCKSERVEKARELLLMLLNLQFKPDVITFSSII 552

Query: 370  KKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCR 549
               CR  ++D A +    M+  G+ P+  TY   I++ C  G +  +  LLK ME+ G  
Sbjct: 553  NGLCRIGQLDDAFKCFNEMVEWGVSPNALTYNIMIHSLCVMGEMGRSLKLLKEMESQGIT 612

Query: 550  PDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLT 654
            PD ++ N+ I  L K G  + A +++    + G+T
Sbjct: 613  PDVFSYNAVILNLCKIGNLEMAQNIFSSMLKSGVT 647



 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 56/172 (32%), Positives = 83/172 (48%)
 Frame = +1

Query: 193 AFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIK 372
           A   FE++   G       YN++I +L  S     A    ++M  +G  PD +T+N LI 
Sbjct: 214 ASEVFEKISFLGFKATTRVYNTVIDALVKSNCLDLAYFKFQQMPAEGCSPDRFTYNHLIH 273

Query: 373 KYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRP 552
             C+   +D+A RLLK M T G +P+ FTY   I+ FC+  RI EA   L  ME  G  P
Sbjct: 274 GVCKLGILDEALRLLKQMETCGHKPNVFTYTMLIDGFCKANRIEEAFRFLGIMEERGIAP 333

Query: 553 DAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVPSRSDASVVDCLSK 708
           +  T  S I    K    ++A D+     +K   L      + ++++ CLSK
Sbjct: 334 NDATIRSLIHGSFKGNNPKDAYDLVCGLLEKQQVLS---EEACSTMLYCLSK 382



 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 48/181 (26%), Positives = 91/181 (50%)
 Frame = +1

Query: 121 GLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKA 300
           G K     ++T+ID L  +N    A+  F++M   G +P+  +YN LI  +C  G   +A
Sbjct: 225 GFKATTRVYNTVIDALVKSNCLDLAYFKFQQMPAEGCSPDRFTYNHLIHGVCKLGILDEA 284

Query: 301 MKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINA 480
           ++LL++M+  G +P+++T+  LI  +C+ ++I++A R L  M   G+ P++ T  + I+ 
Sbjct: 285 LRLLKQMETCGHKPNVFTYTMLIDGFCKANRIEEAFRFLGIMEERGIAPNDATIRSLIHG 344

Query: 481 FCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLK 660
             +     +A  L+  +           C++ +  L K G   E   +  K ++KG    
Sbjct: 345 SFKGNNPKDAYDLVCGLLEKQQVLSEEACSTMLYCLSKEGMVSEILSLLGKIEEKGYFPN 404

Query: 661 P 663
           P
Sbjct: 405 P 405



 Score = 73.6 bits (179), Expect = 8e-11
 Identities = 65/253 (25%), Positives = 103/253 (40%), Gaps = 35/253 (13%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
            QM  +G  P+  T+N LI G  KL  + +A  ++  +   G KP++FT++ +IDG C AN
Sbjct: 255  QMPAEGCSPDRFTYNHLIHGVCKLGILDEALRLLKQMETCGHKPNVFTYTMLIDGFCKAN 314

Query: 181  QTVDAFNCFEEMVEWGITPNAVSYNSLIRS------------------------------ 270
            +  +AF     M E GI PN  +  SLI                                
Sbjct: 315  RIEEAFRFLGIMEERGIAPNDATIRSLIHGSFKGNNPKDAYDLVCGLLEKQQVLSEEACS 374

Query: 271  ---LCIS--GNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTL 435
                C+S  G  S+ + LL K++  G  P+   F  L+    +  K  ++ +LL      
Sbjct: 375  TMLYCLSKEGMVSEILSLLGKIEEKGYFPNPSVFRGLMICLVKGSKFSESCKLLDKFRER 434

Query: 436  GLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEA 615
            G +P   +YI   +     GR  E    +  +  +G     Y  NS I+   K      A
Sbjct: 435  GGKPCFDSYIILTSGLYGVGRNKEGDLYVGYLVLDGLLCSVYAYNSLIDTFSKLRLMNRA 494

Query: 616  TDVWLKYKQKGLT 654
            +  + +  +KG T
Sbjct: 495  SQFFDEMIEKGYT 507



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 49/211 (23%), Positives = 84/211 (39%)
 Frame = +1

Query: 16  GFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTVDA 195
           GF      +NT+I    K   +  A      +   G  PD FT++ +I G+C      +A
Sbjct: 225 GFKATTRVYNTVIDALVKSNCLDLAYFKFQQMPAEGCSPDRFTYNHLIHGVCKLGILDEA 284

Query: 196 FNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKK 375
               ++M   G  PN  +Y  LI   C +    +A + L  M+  G+ P+  T  +LI  
Sbjct: 285 LRLLKQMETCGHKPNVFTYTMLIDGFCKANRIEEAFRFLGIMEERGIAPNDATIRSLIHG 344

Query: 376 YCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPD 555
             + +    A  L+  +L              +    + G + E   LL  +E  G  P+
Sbjct: 345 SFKGNNPKDAYDLVCGLLEKQQVLSEEACSTMLYCLSKEGMVSEILSLLGKIEEKGYFPN 404

Query: 556 AYTCNSFIEALVKSGKSQEATDVWLKYKQKG 648
                  +  LVK  K  E+  +  K++++G
Sbjct: 405 PSVFRGLMICLVKGSKFSESCKLLDKFRERG 435



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 40/132 (30%), Positives = 63/132 (47%)
 Frame = +1

Query: 220 EWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKID 399
           E  IT +A+   +LI S    G A  A ++  K+   G +     +N +I    + + +D
Sbjct: 190 ECRITEDAIC--ALINSWGRLGLAKYASEVFEKISFLGFKATTRVYNTVIDALVKSNCLD 247

Query: 400 KAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFI 579
            A    + M   G  PD FTY   I+  C+ G + EA  LLK ME  G +P+ +T    I
Sbjct: 248 LAYFKFQQMPAEGCSPDRFTYNHLIHGVCKLGILDEALRLLKQMETCGHKPNVFTYTMLI 307

Query: 580 EALVKSGKSQEA 615
           +   K+ + +EA
Sbjct: 308 DGFCKANRIEEA 319


>ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like [Brachypodium distachyon]
          Length = 684

 Score =  212 bits (539), Expect = 1e-52
 Identities = 106/233 (45%), Positives = 158/233 (67%), Gaps = 1/233 (0%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
            +M +KG LPN+VTFNTLI+GY KL +V  A+ ++ ML++HGL PD+ TF+++I+GLC  +
Sbjct: 446  EMREKGVLPNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTH 505

Query: 181  QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
            Q  DAF+CF EM EWG+ PNA +YN L+ +LC +G+ +KA+ LL KM+ DG+ PD Y+FN
Sbjct: 506  QLDDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFN 565

Query: 361  ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
            A I  +CR  K+DKA+ +  +ML LG+ PDN+TY + I A C+  RI EAK +L  ME++
Sbjct: 566  APILSFCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLIKALCDERRIDEAKEILLLMESS 625

Query: 541  GCRPDA-YTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVPSRSDASVVD 696
            G      +T    + AL K+G+  +A  +  KY ++ + L    +R+  S +D
Sbjct: 626  GSSATTHHTHLPIVSALTKTGQFSKAGQLMNKYNRRNVQLSCGSNRTIESKID 678



 Score =  114 bits (284), Expect = 6e-23
 Identities = 65/216 (30%), Positives = 112/216 (51%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
            +M   G L  V ++N +I  + K   V KA E++  + + G+ P+L TF+T+I G     
Sbjct: 411  RMVLDGLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNTLISGYSKLG 470

Query: 181  QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
               +A    + ++E G+ P+ +++ SLI  LC +     A     +M   GV+P+ +T+N
Sbjct: 471  NVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFNEMAEWGVRPNAHTYN 530

Query: 361  ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
             L+   C    ++KA  LL  M   G+ PD +++ A I +FC   ++ +A+ +  +M   
Sbjct: 531  VLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPILSFCRMKKVDKARNIFNAMLRL 590

Query: 541  GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKG 648
            G  PD YT NS I+AL    +  EA ++ L  +  G
Sbjct: 591  GVVPDNYTYNSLIKALCDERRIDEAKEILLLMESSG 626



 Score =  103 bits (258), Expect = 6e-20
 Identities = 61/206 (29%), Positives = 100/206 (48%)
 Frame = +1

Query: 10  QKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTV 189
           +KG  P    +  +I      K   KA   +  ++  GL   + +++ +ID    A    
Sbjct: 379 KKGGNPGFDVYIMVIKSLLGCKSSSKANHYLKRMVLDGLLSGVTSYNMVIDCFVKAGAVD 438

Query: 190 DAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALI 369
            A    +EM E G+ PN V++N+LI      GN   A  +L+ +   G+ PDI TF +LI
Sbjct: 439 KAAEIIKEMREKGVLPNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLI 498

Query: 370 KKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCR 549
              C  H++D A      M   G+RP+  TY   ++A C  G + +A  LL  M+ +G  
Sbjct: 499 NGLCHTHQLDDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGIT 558

Query: 550 PDAYTCNSFIEALVKSGKSQEATDVW 627
           PDAY+ N+ I +  +  K  +A +++
Sbjct: 559 PDAYSFNAPILSFCRMKKVDKARNIF 584



 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 58/218 (26%), Positives = 105/218 (48%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           +M  +G+L +   F  +++   K  ++     ++   +  G  P    +  +I  L    
Sbjct: 341 KMNSRGYLLDNAIFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVYIMVIKSLLGCK 400

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
            +  A +  + MV  G+     SYN +I     +G   KA +++++M+  GV P++ TFN
Sbjct: 401 SSSKANHYLKRMVLDGLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFN 460

Query: 361 ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
            LI  Y +   +  A+ +LK ++  GL PD  T+ + IN  C   ++ +A      M   
Sbjct: 461 TLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFNEMAEW 520

Query: 541 GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLT 654
           G RP+A+T N  + AL  +G   +A D+  K K+ G+T
Sbjct: 521 GVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGIT 558



 Score = 83.6 bits (205), Expect = 8e-14
 Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 35/252 (13%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           QM   G  P+  T+NTL+ G  +   + +A  +V  +   G++P++FT++ ++DG C A 
Sbjct: 201 QMPADGCQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAG 260

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRS------------------------------ 270
           +  DA + F+ M E G++PN  SY +L+                                
Sbjct: 261 RPEDAVHVFDTMKEKGVSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQ 320

Query: 271 ---LCISGN--ASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTL 435
               C+S N  A + +++ +KM   G   D   F  ++    +  ++     LL   +  
Sbjct: 321 CMLYCLSKNEMAKEVVEVTKKMNSRGYLLDNAIFGIVVSCAVKCLELSDLCGLLDDFVKK 380

Query: 436 GLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEA 615
           G  P    YI  I +   C    +A   LK M  +G      + N  I+  VK+G   +A
Sbjct: 381 GGNPGFDVYIMVIKSLLGCKSSSKANHYLKRMVLDGLLSGVTSYNMVIDCFVKAGAVDKA 440

Query: 616 TDVWLKYKQKGL 651
            ++  + ++KG+
Sbjct: 441 AEIIKEMREKGV 452



 Score = 80.9 bits (198), Expect = 5e-13
 Identities = 41/121 (33%), Positives = 65/121 (53%)
 Frame = +1

Query: 193 AFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIK 372
           A   F +M   G+ P+   YN+LI +   +G    A    ++M  DG QPD +T+N L+ 
Sbjct: 160 AHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTYNTLVH 219

Query: 373 KYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRP 552
             C+   ID+A RL++ M   G+RP+ FTY   ++ FC  GR  +A  +  +M+  G  P
Sbjct: 220 GVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSP 279

Query: 553 D 555
           +
Sbjct: 280 N 280



 Score = 74.3 bits (181), Expect = 5e-11
 Identities = 46/203 (22%), Positives = 94/203 (46%)
 Frame = +1

Query: 49  LIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWG 228
           LIA + +L     A E+ + +   GL+P    ++ +I     A     A+  F++M   G
Sbjct: 147 LIASWGRLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADG 206

Query: 229 ITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQ 408
             P+  +YN+L+  +C  G   +A++L+R+M+  G++P+++T+  L+  +C   + + A 
Sbjct: 207 CQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAV 266

Query: 409 RLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEAL 588
            +  +M   G+ P+  +Y   ++    C    +A  +L         P        +  L
Sbjct: 267 HVFDTMKEKGVSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCL 326

Query: 589 VKSGKSQEATDVWLKYKQKGLTL 657
            K+  ++E  +V  K   +G  L
Sbjct: 327 SKNEMAKEVVEVTKKMNSRGYLL 349



 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 56/251 (22%), Positives = 105/251 (41%), Gaps = 35/251 (13%)
 Frame = +1

Query: 4    MTQKGFLPNVVTFNTLIAGYYKLKDVPKA----------------------------REM 99
            M +KG  PN  ++ TL+ G ++     KA                             EM
Sbjct: 272  MKEKGVSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEM 331

Query: 100  VLMLID-------HGLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYNS 258
               +++        G   D   F  ++       +  D     ++ V+ G  P    Y  
Sbjct: 332  AKEVVEVTKKMNSRGYLLDNAIFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVYIM 391

Query: 259  LIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLG 438
            +I+SL    ++SKA   L++M +DG+   + ++N +I  + +   +DKA  ++K M   G
Sbjct: 392  VIKSLLGCKSSSKANHYLKRMVLDGLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKG 451

Query: 439  LRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEAT 618
            + P+  T+   I+ + + G +  AK +LK +  +G  PD  T  S I  L  + +  +A 
Sbjct: 452  VLPNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAF 511

Query: 619  DVWLKYKQKGL 651
            D + +  + G+
Sbjct: 512  DCFNEMAEWGV 522



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
 Frame = +1

Query: 259 LIRSLCIS----GNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSM 426
           L+R+L  S    G A  A ++  +M   G++P    +NALI    R   +D A    + M
Sbjct: 143 LLRALIASWGRLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQM 202

Query: 427 LTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKS 606
              G +PD FTY   ++  C+ G I EA  L++ ME  G RP+ +T    ++    +G+ 
Sbjct: 203 PADGCQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRP 262

Query: 607 QEATDVWLKYKQKGLT 654
           ++A  V+   K+KG++
Sbjct: 263 EDAVHVFDTMKEKGVS 278



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 59/271 (21%), Positives = 100/271 (36%), Gaps = 35/271 (12%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           QM + G  P+   +N LI    +   V  A      +   G +PD FT++T++ G+C   
Sbjct: 166 QMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTYNTLVHGVCQRG 225

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
              +A     +M   GI PN  +Y  L+   C +G    A+ +   M+  GV P+  ++ 
Sbjct: 226 IIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSPNEASYR 285

Query: 361 ALI---------------------------------KKYC--RDHKIDKAQRLLKSMLTL 435
            L+                                   YC  ++    +   + K M + 
Sbjct: 286 TLVHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEMAKEVVEVTKKMNSR 345

Query: 436 GLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEA 615
           G   DN  +   ++   +C  + +  GLL      G  P        I++L+    S +A
Sbjct: 346 GYLLDNAIFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVYIMVIKSLLGCKSSSKA 405

Query: 616 TDVWLKYKQKGLTLKPVPSRSDASVVDCLSK 708
                +    GL L  V S +   V+DC  K
Sbjct: 406 NHYLKRMVLDGL-LSGVTSYN--MVIDCFVK 433


>gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
          Length = 696

 Score =  209 bits (533), Expect = 7e-52
 Identities = 104/217 (47%), Positives = 148/217 (68%), Gaps = 5/217 (2%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
            +M  KGFLPN+VTFNTLI+GY KL +V  A+ ++ ML++HG  PD+ TF+++IDGLC  +
Sbjct: 458  EMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTH 517

Query: 181  QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
            Q  DAF CFEEM EWG+ PNA +YN L+ +LC +G+ +KA+ LL KM+IDGV PD Y+FN
Sbjct: 518  QLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFN 577

Query: 361  ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
            ALI  +CR  K+DKA+ +   M+  G+ PD++TY + I A C+  R+ +AK +L + E +
Sbjct: 578  ALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERS 637

Query: 541  GCRPDAYTCNS-----FIEALVKSGKSQEATDVWLKY 636
            GC     T N+      + AL K G+  EA ++  KY
Sbjct: 638  GCS----TSNNQSYWPIVAALAKMGQFSEAGELMDKY 670



 Score =  114 bits (284), Expect = 6e-23
 Identities = 66/215 (30%), Positives = 111/215 (51%)
 Frame = +1

Query: 4    MTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQ 183
            M  KG L +V+++N +I  + K   V KA E+V  + D G  P+L TF+T+I G      
Sbjct: 424  MVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGN 483

Query: 184  TVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNA 363
              +A    + ++E G  P+ +++ SLI  LC +     A     +M   GV+P+  T+N 
Sbjct: 484  VHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNV 543

Query: 364  LIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNG 543
            L+   C    ++KA  LL  M   G+ PD +++ A I +FC   ++ +A+ +   M   G
Sbjct: 544  LMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFG 603

Query: 544  CRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKG 648
              PD+YT NS I+AL    +  +A ++    ++ G
Sbjct: 604  VVPDSYTYNSLIKALCDERRVNKAKEILFARERSG 638



 Score =  100 bits (249), Expect = 6e-19
 Identities = 59/206 (28%), Positives = 98/206 (47%)
 Frame = +1

Query: 10   QKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTV 189
            + G  P    +  +I      K+  KA   +  ++  GL   + +++ +ID    A    
Sbjct: 391  KNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVD 450

Query: 190  DAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALI 369
             A    +EM + G  PN V++N+LI      GN   A  +L+ +   G  PDI TF +LI
Sbjct: 451  KAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLI 510

Query: 370  KKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCR 549
               C  H++D A    + M   G+RP+  TY   ++  C  G + +A  LL  M+ +G  
Sbjct: 511  DGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVT 570

Query: 550  PDAYTCNSFIEALVKSGKSQEATDVW 627
            PDAY+ N+ I +  +  K  +A D++
Sbjct: 571  PDAYSFNALILSFCRMRKVDKAEDIF 596



 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 58/218 (26%), Positives = 104/218 (47%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
            +M+ +G+L +   F  +++   K  +V    E++   I +G  P    +  +I  L    
Sbjct: 353  RMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCK 412

Query: 181  QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
                A +    MV  G+  + +SYN +I     +G   KA +++++MQ  G  P++ TFN
Sbjct: 413  NFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFN 472

Query: 361  ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
             LI  Y +   +  A+ +LK ++  G  PD  T+ + I+  C   ++ +A    + M   
Sbjct: 473  TLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEW 532

Query: 541  GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLT 654
            G RP+A T N  +  L  +G   +A D+  K K  G+T
Sbjct: 533  GVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVT 570



 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 50/173 (28%), Positives = 87/173 (50%)
 Frame = +1

Query: 193 AFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIK 372
           A   F +M   G+ P+   YN+LI +   +G    A    ++M  DG +PD +T+N+L+ 
Sbjct: 172 AHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVH 231

Query: 373 KYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRP 552
             CR   +D+A RL++ M   G+RP+ FTY   ++ FC  GR+ EA  +L  M+  G  P
Sbjct: 232 GVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAP 291

Query: 553 DAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVPSRSDASVVDCLSKR 711
              T  + +  + +  +  +A  +   +     +L P       +++ CLSK+
Sbjct: 292 SEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACH---TMLYCLSKK 341



 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 43/143 (30%), Positives = 68/143 (47%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           QM + G  P+   +N LIA   +   V  A      +   G +PD FT+++++ G+C   
Sbjct: 178 QMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRG 237

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
              +A     +M   GI PN  +Y  L+   C +G   +A ++L KM+  GV P   T+ 
Sbjct: 238 IVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYR 297

Query: 361 ALIKKYCRDHKIDKAQRLLKSML 429
            L+    R  + DKA R+L   L
Sbjct: 298 TLVHGVFRCLERDKAYRMLSDWL 320



 Score = 70.5 bits (171), Expect = 7e-10
 Identities = 41/132 (31%), Positives = 68/132 (51%)
 Frame = +1

Query: 256 SLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTL 435
           +L+ S    G A  A ++  +M   G++P    +NALI    R   +D A    + M   
Sbjct: 158 ALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPAD 217

Query: 436 GLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEA 615
           G RPD+FTY + ++  C  G + EA  L++ ME  G RP+ +T    ++    +G+ +EA
Sbjct: 218 GCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEA 277

Query: 616 TDVWLKYKQKGL 651
             +  K K+KG+
Sbjct: 278 FRMLDKMKEKGV 289



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 53/240 (22%), Positives = 96/240 (40%), Gaps = 35/240 (14%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDH-------------------- 120
            +M +KG  P+  T+ TL+ G ++  +  KA  M+   + H                    
Sbjct: 283  KMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKD 342

Query: 121  ---------------GLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYN 255
                           G   D   F  ++       +  D     +  ++ G  P    Y 
Sbjct: 343  MAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYI 402

Query: 256  SLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTL 435
             +I+SL    N SKA   L  M + G+   + ++N +I  + +   +DKA+ ++K M   
Sbjct: 403  MVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDK 462

Query: 436  GLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEA 615
            G  P+  T+   I+ + + G +  AK +LK +  +G  PD  T  S I+ L  + +  +A
Sbjct: 463  GFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDA 522


>gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indica Group]
          Length = 696

 Score =  209 bits (533), Expect = 7e-52
 Identities = 104/217 (47%), Positives = 148/217 (68%), Gaps = 5/217 (2%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
            +M  KGFLPN+VTFNTLI+GY KL +V  A+ ++ ML++HG  PD+ TF+++IDGLC  +
Sbjct: 458  EMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTH 517

Query: 181  QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
            Q  DAF CFEEM EWG+ PNA +YN L+ +LC +G+ +KA+ LL KM+IDGV PD Y+FN
Sbjct: 518  QLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFN 577

Query: 361  ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
            ALI  +CR  K+DKA+ +   M+  G+ PD++TY + I A C+  R+ +AK +L + E +
Sbjct: 578  ALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERS 637

Query: 541  GCRPDAYTCNS-----FIEALVKSGKSQEATDVWLKY 636
            GC     T N+      + AL K G+  EA ++  KY
Sbjct: 638  GCS----TSNNQSYWPIVAALAKMGQFSEAGELMDKY 670



 Score =  114 bits (284), Expect = 6e-23
 Identities = 66/215 (30%), Positives = 111/215 (51%)
 Frame = +1

Query: 4    MTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQ 183
            M  KG L +V+++N +I  + K   V KA E+V  + D G  P+L TF+T+I G      
Sbjct: 424  MVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGN 483

Query: 184  TVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNA 363
              +A    + ++E G  P+ +++ SLI  LC +     A     +M   GV+P+  T+N 
Sbjct: 484  VHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNV 543

Query: 364  LIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNG 543
            L+   C    ++KA  LL  M   G+ PD +++ A I +FC   ++ +A+ +   M   G
Sbjct: 544  LMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFG 603

Query: 544  CRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKG 648
              PD+YT NS I+AL    +  +A ++    ++ G
Sbjct: 604  VVPDSYTYNSLIKALCDERRVNKAKEILFARERSG 638



 Score =  100 bits (249), Expect = 6e-19
 Identities = 59/206 (28%), Positives = 98/206 (47%)
 Frame = +1

Query: 10   QKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTV 189
            + G  P    +  +I      K+  KA   +  ++  GL   + +++ +ID    A    
Sbjct: 391  KNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVD 450

Query: 190  DAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALI 369
             A    +EM + G  PN V++N+LI      GN   A  +L+ +   G  PDI TF +LI
Sbjct: 451  KAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLI 510

Query: 370  KKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCR 549
               C  H++D A    + M   G+RP+  TY   ++  C  G + +A  LL  M+ +G  
Sbjct: 511  DGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVT 570

Query: 550  PDAYTCNSFIEALVKSGKSQEATDVW 627
            PDAY+ N+ I +  +  K  +A D++
Sbjct: 571  PDAYSFNALILSFCRMRKVDKAEDIF 596



 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 58/218 (26%), Positives = 104/218 (47%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
            +M+ +G+L +   F  +++   K  +V    E++   I +G  P    +  +I  L    
Sbjct: 353  RMSARGYLLDSTAFGIVMSCSLKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCK 412

Query: 181  QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
                A +    MV  G+  + +SYN +I     +G   KA +++++MQ  G  P++ TFN
Sbjct: 413  NFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFN 472

Query: 361  ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
             LI  Y +   +  A+ +LK ++  G  PD  T+ + I+  C   ++ +A    + M   
Sbjct: 473  TLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEW 532

Query: 541  GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLT 654
            G RP+A T N  +  L  +G   +A D+  K K  G+T
Sbjct: 533  GVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVT 570



 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 50/173 (28%), Positives = 87/173 (50%)
 Frame = +1

Query: 193 AFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIK 372
           A   F +M   G+ P+   YN+LI +   +G    A    ++M  DG +PD +T+N+L+ 
Sbjct: 172 AHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVH 231

Query: 373 KYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRP 552
             CR   +D+A RL++ M   G+RP+ FTY   ++ FC  GR+ EA  +L  M+  G  P
Sbjct: 232 GVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAP 291

Query: 553 DAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVPSRSDASVVDCLSKR 711
              T  + +  + +  +  +A  +   +     +L P       +++ CLSK+
Sbjct: 292 SEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACH---TMLYCLSKK 341



 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 43/143 (30%), Positives = 68/143 (47%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           QM + G  P+   +N LIA   +   V  A      +   G +PD FT+++++ G+C   
Sbjct: 178 QMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRG 237

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
              +A     +M   GI PN  +Y  L+   C +G   +A ++L KM+  GV P   T+ 
Sbjct: 238 IVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYR 297

Query: 361 ALIKKYCRDHKIDKAQRLLKSML 429
            L+    R  + DKA R+L   L
Sbjct: 298 TLVHGVFRCLERDKAYRMLSDWL 320



 Score = 70.1 bits (170), Expect = 9e-10
 Identities = 41/132 (31%), Positives = 67/132 (50%)
 Frame = +1

Query: 256 SLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTL 435
           +L+ S    G A  A ++  +M   G++P    +NALI    R   +D A    + M   
Sbjct: 158 ALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPAD 217

Query: 436 GLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEA 615
           G RPD FTY + ++  C  G + EA  L++ ME  G RP+ +T    ++    +G+ +EA
Sbjct: 218 GCRPDRFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEA 277

Query: 616 TDVWLKYKQKGL 651
             +  K K+KG+
Sbjct: 278 FRMLDKMKEKGV 289



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 53/240 (22%), Positives = 96/240 (40%), Gaps = 35/240 (14%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDH-------------------- 120
            +M +KG  P+  T+ TL+ G ++  +  KA  M+   + H                    
Sbjct: 283  KMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKD 342

Query: 121  ---------------GLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYN 255
                           G   D   F  ++       +  D     +  ++ G  P    Y 
Sbjct: 343  MAKEAVEFAKRMSARGYLLDSTAFGIVMSCSLKCLEVSDLCELLDSFIKNGGNPGFDVYI 402

Query: 256  SLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTL 435
             +I+SL    N SKA   L  M + G+   + ++N +I  + +   +DKA+ ++K M   
Sbjct: 403  MVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDK 462

Query: 436  GLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEA 615
            G  P+  T+   I+ + + G +  AK +LK +  +G  PD  T  S I+ L  + +  +A
Sbjct: 463  GFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDA 522


>ref|NP_001067007.1| Os12g0557800 [Oryza sativa Japonica Group]
            gi|113649514|dbj|BAF30026.1| Os12g0557800 [Oryza sativa
            Japonica Group]
          Length = 682

 Score =  209 bits (533), Expect = 7e-52
 Identities = 104/217 (47%), Positives = 148/217 (68%), Gaps = 5/217 (2%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
            +M  KGFLPN+VTFNTLI+GY KL +V  A+ ++ ML++HG  PD+ TF+++IDGLC  +
Sbjct: 444  EMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTH 503

Query: 181  QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
            Q  DAF CFEEM EWG+ PNA +YN L+ +LC +G+ +KA+ LL KM+IDGV PD Y+FN
Sbjct: 504  QLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFN 563

Query: 361  ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
            ALI  +CR  K+DKA+ +   M+  G+ PD++TY + I A C+  R+ +AK +L + E +
Sbjct: 564  ALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERS 623

Query: 541  GCRPDAYTCNS-----FIEALVKSGKSQEATDVWLKY 636
            GC     T N+      + AL K G+  EA ++  KY
Sbjct: 624  GCS----TSNNQSYWPIVAALAKMGQFSEAGELMDKY 656



 Score =  114 bits (284), Expect = 6e-23
 Identities = 66/215 (30%), Positives = 111/215 (51%)
 Frame = +1

Query: 4    MTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQ 183
            M  KG L +V+++N +I  + K   V KA E+V  + D G  P+L TF+T+I G      
Sbjct: 410  MVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGN 469

Query: 184  TVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNA 363
              +A    + ++E G  P+ +++ SLI  LC +     A     +M   GV+P+  T+N 
Sbjct: 470  VHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNV 529

Query: 364  LIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNG 543
            L+   C    ++KA  LL  M   G+ PD +++ A I +FC   ++ +A+ +   M   G
Sbjct: 530  LMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFG 589

Query: 544  CRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKG 648
              PD+YT NS I+AL    +  +A ++    ++ G
Sbjct: 590  VVPDSYTYNSLIKALCDERRVNKAKEILFARERSG 624



 Score =  100 bits (249), Expect = 6e-19
 Identities = 59/206 (28%), Positives = 98/206 (47%)
 Frame = +1

Query: 10  QKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTV 189
           + G  P    +  +I      K+  KA   +  ++  GL   + +++ +ID    A    
Sbjct: 377 KNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVD 436

Query: 190 DAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALI 369
            A    +EM + G  PN V++N+LI      GN   A  +L+ +   G  PDI TF +LI
Sbjct: 437 KAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLI 496

Query: 370 KKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCR 549
              C  H++D A    + M   G+RP+  TY   ++  C  G + +A  LL  M+ +G  
Sbjct: 497 DGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVT 556

Query: 550 PDAYTCNSFIEALVKSGKSQEATDVW 627
           PDAY+ N+ I +  +  K  +A D++
Sbjct: 557 PDAYSFNALILSFCRMRKVDKAEDIF 582



 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 58/218 (26%), Positives = 104/218 (47%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           +M+ +G+L +   F  +++   K  +V    E++   I +G  P    +  +I  L    
Sbjct: 339 RMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCK 398

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
               A +    MV  G+  + +SYN +I     +G   KA +++++MQ  G  P++ TFN
Sbjct: 399 NFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFN 458

Query: 361 ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
            LI  Y +   +  A+ +LK ++  G  PD  T+ + I+  C   ++ +A    + M   
Sbjct: 459 TLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEW 518

Query: 541 GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLT 654
           G RP+A T N  +  L  +G   +A D+  K K  G+T
Sbjct: 519 GVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVT 556



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 46/173 (26%), Positives = 82/173 (47%)
 Frame = +1

Query: 193 AFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIK 372
           A   F +M   G+ P+   Y + +R               ++M  DG +PD +T+N+L+ 
Sbjct: 172 AHEVFVQMPRLGLRPSTAVYTAYLR--------------FQQMPADGCRPDHFTYNSLVH 217

Query: 373 KYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRP 552
             CR   +D+A RL++ M   G+RP+ FTY   ++ FC  GR+ EA  +L  M+  G  P
Sbjct: 218 GVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAP 277

Query: 553 DAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVPSRSDASVVDCLSKR 711
              T  + +  + +  +  +A  +   +     +L P       +++ CLSK+
Sbjct: 278 SEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACH---TMLYCLSKK 327



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 53/240 (22%), Positives = 96/240 (40%), Gaps = 35/240 (14%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDH-------------------- 120
           +M +KG  P+  T+ TL+ G ++  +  KA  M+   + H                    
Sbjct: 269 KMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKD 328

Query: 121 ---------------GLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYN 255
                          G   D   F  ++       +  D     +  ++ G  P    Y 
Sbjct: 329 MAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYI 388

Query: 256 SLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTL 435
            +I+SL    N SKA   L  M + G+   + ++N +I  + +   +DKA+ ++K M   
Sbjct: 389 MVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDK 448

Query: 436 GLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEA 615
           G  P+  T+   I+ + + G +  AK +LK +  +G  PD  T  S I+ L  + +  +A
Sbjct: 449 GFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDA 508



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 39/143 (27%), Positives = 65/143 (45%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           QM + G  P+   +      Y + + +P            G +PD FT+++++ G+C   
Sbjct: 178 QMPRLGLRPSTAVYTA----YLRFQQMPA----------DGCRPDHFTYNSLVHGVCRRG 223

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
              +A     +M   GI PN  +Y  L+   C +G   +A ++L KM+  GV P   T+ 
Sbjct: 224 IVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYR 283

Query: 361 ALIKKYCRDHKIDKAQRLLKSML 429
            L+    R  + DKA R+L   L
Sbjct: 284 TLVHGVFRCLERDKAYRMLSDWL 306


>ref|XP_006406795.1| hypothetical protein EUTSA_v10022362mg [Eutrema salsugineum]
            gi|557107941|gb|ESQ48248.1| hypothetical protein
            EUTSA_v10022362mg [Eutrema salsugineum]
          Length = 644

 Score =  204 bits (520), Expect = 2e-50
 Identities = 92/188 (48%), Positives = 133/188 (70%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
            +M  +G  P++VTFNT ++GY    DV K  E++  L+DHG KPD+ TFS++I+ LC A 
Sbjct: 445  EMQDRGISPSLVTFNTFLSGYSANGDVKKVHEVLEKLLDHGCKPDVITFSSVINCLCRAK 504

Query: 181  QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
            +  DAF+CF+EM+EWGI PN ++YN LIR  C +G+  +++KL  KM+ +G+ PD+Y +N
Sbjct: 505  EIKDAFDCFKEMLEWGIEPNEITYNILIRFSCSTGDTGRSVKLFAKMKENGLSPDVYAYN 564

Query: 361  ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
            A+I+ +CR  K+  A+ LLK+ML +GL+PDNFTY   I A  E GR  EA+ +  SME +
Sbjct: 565  AVIQSFCRMRKVKNAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSMERH 624

Query: 541  GCRPDAYT 564
            GC PD+YT
Sbjct: 625  GCVPDSYT 632



 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 54/215 (25%), Positives = 99/215 (46%)
 Frame = +1

Query: 10  QKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTV 189
           ++G++P+  TFN  +    K  D+ +   +    I  G+KP    +  ++  L  A +  
Sbjct: 343 ERGYVPDSSTFNASMICLLKGYDLTEMCGIFDEFISRGVKPGFNGYLVVVKALLSAQRFS 402

Query: 190 DAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALI 369
           ++    ++M    +  +A  YN++I  LC +    +A   L +MQ  G+ P + TFN  +
Sbjct: 403 ESDRYLKQMGVDRLLSSAYDYNAVIDCLCKARRTDRAAMFLTEMQDRGISPSLVTFNTFL 462

Query: 370 KKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCR 549
             Y  +  + K   +L+ +L  G +PD  T+ + IN  C    I +A    K M   G  
Sbjct: 463 SGYSANGDVKKVHEVLEKLLDHGCKPDVITFSSVINCLCRAKEIKDAFDCFKEMLEWGIE 522

Query: 550 PDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLT 654
           P+  T N  I     +G +  +  ++ K K+ GL+
Sbjct: 523 PNEITYNILIRFSCSTGDTGRSVKLFAKMKENGLS 557



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 50/167 (29%), Positives = 89/167 (53%)
 Frame = +1

Query: 205 FEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCR 384
           F ++   G+ P+   YN++I +L  S +   A    ++M+ D  +PD +T+N LI   C+
Sbjct: 163 FAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDDCKPDRFTYNILIHGVCK 222

Query: 385 DHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYT 564
              +D+A RL+K M   G RP+ FT+   I+ F   GR+ EA   L++M +    P+  T
Sbjct: 223 KGVVDEAIRLVKQMEREGNRPNVFTFTILIDGFLIAGRVEEALKQLETMRSRKLNPNEAT 282

Query: 565 CNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVPSRSDASVVDCLS 705
             + +  + +  +  EA +V L++ +K   L+ V   +  +V+ CLS
Sbjct: 283 IRTLVHGIFRCLQPCEAFEVLLEFIEKNSNLQRV---AYDTVLCCLS 326



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 54/218 (24%), Positives = 98/218 (44%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           QM ++G  PNV TF  LI G+     V +A + +  +    L P+  T  T++ G+    
Sbjct: 235 QMEREGNRPNVFTFTILIDGFLIAGRVEEALKQLETMRSRKLNPNEATIRTLVHGIFRCL 294

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
           Q  +AF    E +E       V+Y++++  L  +  A +    LRK    G  PD  TFN
Sbjct: 295 QPCEAFEVLLEFIEKNSNLQRVAYDTVLCCLSSNSMAKETALFLRKTGERGYVPDSSTFN 354

Query: 361 ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
           A +    + + + +   +    ++ G++P    Y+  + A     R  E+   LK M  +
Sbjct: 355 ASMICLLKGYDLTEMCGIFDEFISRGVKPGFNGYLVVVKALLSAQRFSESDRYLKQMGVD 414

Query: 541 GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLT 654
                AY  N+ I+ L K+ ++  A     + + +G++
Sbjct: 415 RLLSSAYDYNAVIDCLCKARRTDRAAMFLTEMQDRGIS 452



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 39/141 (27%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
 Frame = +1

Query: 121 GLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKA 300
           G+KP    ++ +ID L  +N    A+  F++M      P+  +YN LI  +C  G   +A
Sbjct: 170 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDDCKPDRFTYNILIHGVCKKGVVDEA 229

Query: 301 MKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINA 480
           ++L+++M+ +G +P+++TF  LI  +    ++++A + L++M +  L P+  T    ++ 
Sbjct: 230 IRLVKQMEREGNRPNVFTFTILIDGFLIAGRVEEALKQLETMRSRKLNPNEATIRTLVHG 289

Query: 481 FCECGRILEA-KGLLKSMENN 540
              C +  EA + LL+ +E N
Sbjct: 290 IFRCLQPCEAFEVLLEFIEKN 310



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 46/217 (21%), Positives = 85/217 (39%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           Q++  G  P+   +N +I    K   +  A      +     KPD FT++ +I G+C   
Sbjct: 165 QISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDDCKPDRFTYNILIHGVCKKG 224

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
              +A    ++M   G  PN  ++  LI    I+G   +A+K L  M+   + P+  T  
Sbjct: 225 VVDEAIRLVKQMEREGNRPNVFTFTILIDGFLIAGRVEEALKQLETMRSRKLNPNEATIR 284

Query: 361 ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
            L+    R  +  +A  +L   +          Y   +          E    L+     
Sbjct: 285 TLVHGIFRCLQPCEAFEVLLEFIEKNSNLQRVAYDTVLCCLSSNSMAKETALFLRKTGER 344

Query: 541 GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGL 651
           G  PD+ T N+ +  L+K     E   ++ ++  +G+
Sbjct: 345 GYVPDSSTFNASMICLLKGYDLTEMCGIFDEFISRGV 381


>ref|NP_188314.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75274022|sp|Q9LSQ2.1|PP239_ARATH RecName:
            Full=Putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial; AltName: Full=Protein
            PENTATRICOPEPTIDE REPEAT 40; Flags: Precursor
            gi|7670019|dbj|BAA94973.1| salt-inducible protein-like
            [Arabidopsis thaliana] gi|332642359|gb|AEE75880.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 659

 Score =  204 bits (518), Expect = 4e-50
 Identities = 99/205 (48%), Positives = 139/205 (67%), Gaps = 1/205 (0%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
            +M  +G  PN+VTFNT ++GY    DV K   ++  L+ HG KPD+ TFS II+ LC A 
Sbjct: 450  EMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAK 509

Query: 181  QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
            +  DAF+CF+EM+EWGI PN ++YN LIRS C +G+  +++KL  KM+ +G+ PD+Y +N
Sbjct: 510  EIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYN 569

Query: 361  ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
            A I+ +C+  K+ KA+ LLK+ML +GL+PDNFTY   I A  E GR  EA+ +  S+E +
Sbjct: 570  ATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERH 629

Query: 541  GCRPDAYTCNSFIEA-LVKSGKSQE 612
            GC PD+YT     E  L KSG S+E
Sbjct: 630  GCVPDSYTKRLVEELDLRKSGLSRE 654



 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 54/215 (25%), Positives = 99/215 (46%)
 Frame = +1

Query: 10  QKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTV 189
           ++G++P+  TFN  ++   K  D+ +   +    +  G+KP    +  ++  L  A +  
Sbjct: 348 ERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFS 407

Query: 190 DAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALI 369
           +     ++M   G+  +  SYN++I  LC +     A   L +MQ  G+ P++ TFN  +
Sbjct: 408 EGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFL 467

Query: 370 KKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCR 549
             Y     + K   +L+ +L  G +PD  T+   IN  C    I +A    K M   G  
Sbjct: 468 SGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE 527

Query: 550 PDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLT 654
           P+  T N  I +   +G +  +  ++ K K+ GL+
Sbjct: 528 PNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLS 562



 Score = 80.9 bits (198), Expect = 5e-13
 Identities = 55/218 (25%), Positives = 97/218 (44%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           QM Q+G  PNV T+  LI G+     V +A + + M+    L P+  T  T + G+    
Sbjct: 240 QMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCL 299

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
               AF      +E       V Y++++  L  +  A +  + LRK+   G  PD  TFN
Sbjct: 300 PPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFN 359

Query: 361 ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
           A +    + H + +  R+    ++ G++P    Y+  + A     R  E    LK M  +
Sbjct: 360 AAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVD 419

Query: 541 GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGLT 654
           G     Y+ N+ I+ L K+ + + A     + + +G++
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGIS 457



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 51/167 (30%), Positives = 86/167 (51%)
 Frame = +1

Query: 205 FEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIKKYCR 384
           F ++   G+ P+   YN++I +L  S +   A    ++M+ DG +PD +T+N LI   C+
Sbjct: 168 FAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCK 227

Query: 385 DHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYT 564
              +D+A RL+K M   G RP+ FTY   I+ F   GR+ EA   L+ M      P+  T
Sbjct: 228 KGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEAT 287

Query: 565 CNSFIEALVKSGKSQEATDVWLKYKQKGLTLKPVPSRSDASVVDCLS 705
             +F+  + +     +A +V + + +K   L+ V      +V+ CLS
Sbjct: 288 IRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRV---GYDAVLYCLS 331



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 35/124 (28%), Positives = 68/124 (54%)
 Frame = +1

Query: 121 GLKPDLFTFSTIIDGLCLANQTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKA 300
           G+KP    ++ +ID L  +N    A+  F++M   G  P+  +YN LI  +C  G   +A
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234

Query: 301 MKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINA 480
           ++L+++M+ +G +P+++T+  LI  +    ++D+A + L+ M    L P+  T   F++ 
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHG 294

Query: 481 FCEC 492
              C
Sbjct: 295 IFRC 298



 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 49/217 (22%), Positives = 87/217 (40%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           Q++  G  P+   +N +I    K   +  A      +   G KPD FT++ +I G+C   
Sbjct: 170 QISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKG 229

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFN 360
              +A    ++M + G  PN  +Y  LI    I+G   +A+K L  M++  + P+  T  
Sbjct: 230 VVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIR 289

Query: 361 ALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENN 540
             +    R     KA  +L   +          Y A +          E    L+ +   
Sbjct: 290 TFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGER 349

Query: 541 GCRPDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGL 651
           G  PD+ T N+ +  L+K     E   ++  +  +G+
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGV 386


>ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like [Cucumis sativus]
          Length = 697

 Score =  203 bits (516), Expect = 7e-50
 Identities = 91/195 (46%), Positives = 140/195 (71%)
 Frame = +1

Query: 13   KGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTVD 192
            +G  PN+VT+NTLI G+ +  ++ KA+E++ ML++   +PD+FTF+++IDGLC A++  +
Sbjct: 503  RGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHEN 562

Query: 193  AFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALIK 372
            AF CF EMVEW + PN ++YN LI S C  G+ S++  LLR+M++ G+QPD ++FNALI+
Sbjct: 563  AFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQ 622

Query: 373  KYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRP 552
             Y   ++  KA++L  SML LG++PDN+TY A I + C+ GR  +A+ +  SM+ NGC P
Sbjct: 623  GYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTP 682

Query: 553  DAYTCNSFIEALVKS 597
            D+YTC+ F + L  S
Sbjct: 683  DSYTCSLFSDTLAHS 697



 Score =  124 bits (311), Expect = 4e-26
 Identities = 75/250 (30%), Positives = 119/250 (47%), Gaps = 35/250 (14%)
 Frame = +1

Query: 10   QKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTV 189
            Q G  P   T+ TLI   YK   +      +  LI+ GL  ++++++ +ID LC      
Sbjct: 432  QSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMD 491

Query: 190  DAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALI 369
             A   F ++   GI+PN V+YN+LI   C +GN  KA +LL  +     +PDI+TFN+LI
Sbjct: 492  RASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLI 551

Query: 370  KKYCRDHK-----------------------------------IDKAQRLLKSMLTLGLR 444
               C+ HK                                   + ++  LL+ M   G++
Sbjct: 552  DGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQ 611

Query: 445  PDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEATDV 624
            PD F++ A I  +    R  +A+ L  SM   G +PD YT  + I++L KSG+  +A ++
Sbjct: 612  PDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREI 671

Query: 625  WLKYKQKGLT 654
            +L  K+ G T
Sbjct: 672  FLSMKENGCT 681



 Score =  101 bits (252), Expect = 3e-19
 Identities = 60/214 (28%), Positives = 103/214 (48%)
 Frame = +1

Query: 10   QKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLANQTV 189
            ++G++P+  TFN  +A   K  D+     +    +  G+KP   T+ T+I+ L  A +  
Sbjct: 397  KEGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKME 456

Query: 190  DAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYTFNALI 369
                  + ++  G+  N  SYN +I  LC   +  +A ++ R +   G+ P+I T+N LI
Sbjct: 457  IGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLI 516

Query: 370  KKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCR 549
              +CR+  +DKAQ LL+ +L    RPD FT+ + I+  C+  +   A G    M      
Sbjct: 517  GGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVP 576

Query: 550  PDAYTCNSFIEALVKSGKSQEATDVWLKYKQKGL 651
            P+  T N  I +    G    +T +  + K  G+
Sbjct: 577  PNVITYNILICSFCAIGDVSRSTHLLRQMKLHGI 610



 Score = 84.0 bits (206), Expect = 6e-14
 Identities = 41/118 (34%), Positives = 68/118 (57%)
 Frame = +1

Query: 1   QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
           +M +    PNV+T+N LI  +  + DV ++  ++  +  HG++PD F+F+ +I G    N
Sbjct: 569 EMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKN 628

Query: 181 QTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPDIYT 354
           +   A   F+ M+  GI P+  +Y +LI+SLC SG   KA ++   M+ +G  PD YT
Sbjct: 629 RFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYT 686



 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 56/253 (22%), Positives = 106/253 (41%), Gaps = 35/253 (13%)
 Frame = +1

Query: 1    QMTQKGFLPNVVTFNTLIAGYYKLKDVPKAREMVLMLIDHGLKPDLFTFSTIIDGLCLAN 180
            QM+    +P+  T+N LI G  +L  V +A  ++  +   G  P++FT++ +IDG   A 
Sbjct: 254  QMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAK 313

Query: 181  QTVDAFNCFEEMVEWGITPNAVSYNSLIRSL----------------------------- 273
            +  +AF   + M E  + PN  +  SL+  +                             
Sbjct: 314  RAGEAFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCD 373

Query: 274  ----CISGN--ASKAMKLLRKMQIDGVQPDIYTFNALIKKYCRDHKIDKAQRLLKSMLTL 435
                C+S N  AS+A+  L K   +G  P   TFN  +    +   +     +  + +  
Sbjct: 374  NILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQS 433

Query: 436  GLRPDNFTYIAFINAFCECGRILEAKGLLKSMENNGCRPDAYTCNSFIEALVKSGKSQEA 615
            G++P   TY+  I A  + G++      +  + N+G   + Y+ N  I+ L K      A
Sbjct: 434  GVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRA 493

Query: 616  TDVWLKYKQKGLT 654
            ++++     +G++
Sbjct: 494  SEMFRDLHNRGIS 506



 Score = 70.5 bits (171), Expect = 7e-10
 Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 2/165 (1%)
 Frame = +1

Query: 166 LCLANQTVDAFNCFEEMVEWGITPNAVSYNSLIRSLCISGNASKAMKLLRKMQIDGVQPD 345
           L LAN  V+ F    ++   G+ P    YN+++ +L  S +   A    ++M      PD
Sbjct: 207 LGLANYCVEVFG---QIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPD 263

Query: 346 IYTFNALIKKYCRDHKIDKAQRLLKSMLTLGLRPDNFTYIAFINAFCECGRILEAKGLLK 525
            +T+N LI   CR   +D+A RL+K M  LG  P+ FTY   I+ F    R  EA  +L+
Sbjct: 264 RFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQ 323

Query: 526 SMENNGCRPDAYTCNSFIEALVKSGKSQEATDVWLKY--KQKGLT 654
           +M+     P+  T  S +  + +     +A ++ L++  +++G+T
Sbjct: 324 TMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGIT 368


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