BLASTX nr result

ID: Mentha22_contig00049061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00049061
         (327 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subc...    63   4e-08
gb|AAV44026.1| hypothetical protein [Oryza sativa Japonica Group]      59   5e-07
emb|CAE76054.1| B1248C03.13 [Oryza sativa Japonica Group]              59   7e-07
gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japo...    58   1e-06
dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica G...    58   1e-06
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...    58   2e-06
emb|CAN71385.1| hypothetical protein VITISV_016099 [Vitis vinifera]    57   2e-06
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]    56   5e-06
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat...    56   6e-06

>gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 358

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 29/59 (49%), Positives = 37/59 (62%)
 Frame = +3

Query: 150 GSKNIICQLCGKIGHLALKCFKRFDVHFTGEPSTNPQAFVADAAQEFGEEHTWYIDSGA 326
           G    ICQLCGKIGH  +KC+KRFD  ++GE  +     VA A   +G +  WYID+GA
Sbjct: 217 GKLKPICQLCGKIGHTVVKCWKRFDTSYSGEEKS-----VAAATNSYGVDTNWYIDTGA 270


>gb|AAV44026.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 760

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 25/53 (47%), Positives = 33/53 (62%)
 Frame = +3

Query: 168 CQLCGKIGHLALKCFKRFDVHFTGEPSTNPQAFVADAAQEFGEEHTWYIDSGA 326
           CQLCGK+GH  +KC+KRFD  FTGE     +     A   +G +  WY+D+GA
Sbjct: 201 CQLCGKLGHTVIKCYKRFDTSFTGE-----EKAANTATTSYGIDTNWYVDTGA 248


>emb|CAE76054.1| B1248C03.13 [Oryza sativa Japonica Group]
          Length = 261

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 25/53 (47%), Positives = 33/53 (62%)
 Frame = +3

Query: 168 CQLCGKIGHLALKCFKRFDVHFTGEPSTNPQAFVADAAQEFGEEHTWYIDSGA 326
           CQLCGK+GH  +KC+KRFD  FTGE     +     A   +G +  WY+D+GA
Sbjct: 187 CQLCGKLGHTVIKCYKRFDTSFTGE-----EKAANAATTSYGIDTNWYVDTGA 234


>gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japonica Group]
          Length = 499

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/53 (49%), Positives = 32/53 (60%)
 Frame = +3

Query: 168 CQLCGKIGHLALKCFKRFDVHFTGEPSTNPQAFVADAAQEFGEEHTWYIDSGA 326
           CQLC K+GH  +KC+KRFD  FTGE  +      A A   +G    WYID+GA
Sbjct: 154 CQLCDKLGHTVVKCYKRFDASFTGEEKS-----AAAATSSYGVGTNWYIDTGA 201


>dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 572

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/53 (49%), Positives = 32/53 (60%)
 Frame = +3

Query: 168 CQLCGKIGHLALKCFKRFDVHFTGEPSTNPQAFVADAAQEFGEEHTWYIDSGA 326
           CQLC K+GH  +KC+KRFD  FTGE  +      A A   +G    WYID+GA
Sbjct: 227 CQLCDKLGHTVVKCYKRFDASFTGEEKS-----AAAATSSYGVGTNWYIDTGA 274


>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 932

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/53 (52%), Positives = 32/53 (60%)
 Frame = +3

Query: 168 CQLCGKIGHLALKCFKRFDVHFTGEPSTNPQAFVADAAQEFGEEHTWYIDSGA 326
           CQLCGKIGH   KC+KRFD  FTGE  +        AA  +  +  WYIDSGA
Sbjct: 194 CQLCGKIGHTVHKCWKRFDASFTGEDKS-----ANVAASSYEVDTNWYIDSGA 241


>emb|CAN71385.1| hypothetical protein VITISV_016099 [Vitis vinifera]
          Length = 494

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/54 (46%), Positives = 35/54 (64%)
 Frame = +3

Query: 165 ICQLCGKIGHLALKCFKRFDVHFTGEPSTNPQAFVADAAQEFGEEHTWYIDSGA 326
           ICQ CGKIGH+ +KC+KRFD+ F+    T+ QA +A  +      H WY++S A
Sbjct: 353 ICQFCGKIGHVVVKCYKRFDISFSSVDLTSYQANIAFTSN--FAXHEWYVBSSA 404


>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
          Length = 2203

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 14/102 (13%)
 Frame = +3

Query: 3   LQEAQLAFQAYEQRLAQY-AFNLIDPSVNVAYYXXXXXXXXXXXXXXKMSGSKN------ 161
           LQE     Q++E RL Q  A ++ID                      K S SKN      
Sbjct: 101 LQEVHYLLQSHEIRLEQLSAASVIDVPPAAHITIGGVQNSNTNDGQFKSSSSKNFRPRNV 160

Query: 162 -------IICQLCGKIGHLALKCFKRFDVHFTGEPSTNPQAF 266
                  I+CQLCGK+GH A+KCF RFDV+F   P    Q F
Sbjct: 161 CNPQTSRIVCQLCGKMGHTAMKCFHRFDVYFQSPPHAQNQQF 202


>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
           gi|31430072|gb|AAP52036.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1058

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/59 (44%), Positives = 33/59 (55%)
 Frame = +3

Query: 150 GSKNIICQLCGKIGHLALKCFKRFDVHFTGEPSTNPQAFVADAAQEFGEEHTWYIDSGA 326
           G     CQLCGK+GH   KC+KRFD  FT E  +   A  A  +  +G +  WY+DS A
Sbjct: 216 GKPKPTCQLCGKVGHTVAKCWKRFDPSFTREEKS---ANTAATSSSYGIDTNWYVDSNA 271


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